View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8891_low_56 (Length: 219)

Name: NF8891_low_56
Description: NF8891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8891_low_56
NF8891_low_56
[»] chr6 (22 HSPs)
chr6 (59-131)||(29300355-29300427)
chr6 (142-194)||(606449-606501)
chr6 (142-194)||(3913367-3913419)
chr6 (142-194)||(12170713-12170765)
chr6 (142-194)||(32327013-32327065)
chr6 (155-194)||(21426492-21426531)
chr6 (142-197)||(34185487-34185542)
chr6 (137-194)||(67789-67846)
chr6 (142-194)||(9341444-9341496)
chr6 (142-194)||(14174864-14174916)
chr6 (142-194)||(14179400-14179452)
chr6 (142-194)||(29319670-29319722)
chr6 (142-194)||(32060121-32060173)
chr6 (142-177)||(1450529-1450564)
chr6 (143-194)||(30894843-30894894)
chr6 (142-175)||(4984343-4984376)
chr6 (142-191)||(7514996-7515045)
chr6 (142-175)||(12168946-12168979)
chr6 (142-175)||(25064504-25064537)
chr6 (155-187)||(15612378-15612410)
chr6 (142-190)||(31851674-31851722)
chr6 (142-194)||(33052961-33053013)
[»] chr2 (32 HSPs)
chr2 (144-194)||(1421929-1421979)
chr2 (142-194)||(4041388-4041440)
chr2 (143-189)||(17248943-17248989)
chr2 (142-194)||(1415811-1415863)
chr2 (142-194)||(5427663-5427715)
chr2 (142-194)||(12553963-12554015)
chr2 (142-194)||(31193130-31193182)
chr2 (142-194)||(31788710-31788762)
chr2 (142-194)||(38445420-38445472)
chr2 (155-194)||(11985040-11985079)
chr2 (142-187)||(7646739-7646784)
chr2 (142-194)||(4779007-4779059)
chr2 (142-194)||(18763722-18763774)
chr2 (143-187)||(28037345-28037389)
chr2 (142-194)||(33923959-33924011)
chr2 (142-194)||(36692128-36692180)
chr2 (142-194)||(36942916-36942968)
chr2 (142-187)||(459052-459097)
chr2 (142-175)||(3268611-3268644)
chr2 (142-175)||(8806138-8806171)
chr2 (142-187)||(30923251-30923296)
chr2 (142-175)||(32678899-32678932)
chr2 (142-175)||(33228764-33228797)
chr2 (157-194)||(35220582-35220619)
chr2 (142-175)||(41431300-41431333)
chr2 (150-186)||(11931276-11931312)
chr2 (142-194)||(14416420-14416472)
chr2 (143-191)||(30399824-30399872)
chr2 (143-175)||(30420941-30420973)
chr2 (142-194)||(33585529-33585581)
chr2 (142-194)||(36175306-36175358)
chr2 (142-194)||(37876400-37876452)
[»] chr8 (26 HSPs)
chr8 (142-194)||(27498157-27498209)
chr8 (138-191)||(40211087-40211140)
chr8 (155-194)||(16928561-16928600)
chr8 (155-194)||(23230889-23230928)
chr8 (142-185)||(39152918-39152961)
chr8 (142-187)||(7677072-7677117)
chr8 (142-191)||(19443844-19443893)
chr8 (133-194)||(37971533-37971594)
chr8 (142-194)||(7883032-7883084)
chr8 (154-194)||(29939547-29939587)
chr8 (142-194)||(31013399-31013451)
chr8 (142-189)||(1236489-1236536)
chr8 (155-194)||(25190869-25190908)
chr8 (142-175)||(4809239-4809272)
chr8 (142-175)||(9072993-9073026)
chr8 (142-175)||(9498375-9498408)
chr8 (142-187)||(12654326-12654371)
chr8 (142-175)||(29777494-29777527)
chr8 (141-194)||(45445601-45445654)
chr8 (142-194)||(8412313-8412365)
chr8 (142-194)||(9637200-9637252)
chr8 (142-194)||(16247015-16247067)
chr8 (142-194)||(28086603-28086655)
chr8 (142-194)||(30568112-30568164)
chr8 (155-191)||(33214475-33214511)
chr8 (142-194)||(40618864-40618916)
[»] chr4 (31 HSPs)
chr4 (142-194)||(13634379-13634431)
chr4 (136-194)||(21686029-21686087)
chr4 (142-194)||(19853305-19853357)
chr4 (142-194)||(26633464-26633516)
chr4 (142-194)||(32766778-32766830)
chr4 (142-194)||(56040439-56040491)
chr4 (155-194)||(24098875-24098914)
chr4 (155-194)||(43510460-43510499)
chr4 (155-194)||(48257438-48257477)
chr4 (141-194)||(43853718-43853771)
chr4 (142-194)||(2521043-2521095)
chr4 (142-194)||(4142557-4142609)
chr4 (142-194)||(36161986-36162038)
chr4 (129-189)||(47320193-47320253)
chr4 (155-194)||(17949129-17949168)
chr4 (155-194)||(17952981-17953020)
chr4 (144-187)||(46990909-46990952)
chr4 (149-187)||(32952541-32952579)
chr4 (142-175)||(1532188-1532221)
chr4 (142-175)||(4644138-4644171)
chr4 (142-187)||(8670750-8670795)
chr4 (157-194)||(10258709-10258746)
chr4 (142-175)||(10389530-10389563)
chr4 (142-187)||(12493603-12493648)
chr4 (142-175)||(38706486-38706519)
chr4 (142-194)||(6155002-6155054)
chr4 (155-187)||(18138706-18138738)
chr4 (142-194)||(22611454-22611506)
chr4 (142-194)||(40065987-40066039)
chr4 (155-187)||(49125919-49125951)
chr4 (142-194)||(53444383-53444435)
[»] chr3 (36 HSPs)
chr3 (142-194)||(21533602-21533654)
chr3 (142-194)||(48650527-48650579)
chr3 (142-191)||(36910559-36910608)
chr3 (142-194)||(9797327-9797379)
chr3 (142-194)||(9998710-9998762)
chr3 (142-194)||(10108479-10108531)
chr3 (142-194)||(10233313-10233365)
chr3 (142-194)||(21431858-21431910)
chr3 (142-194)||(43017131-43017183)
chr3 (142-194)||(54149234-54149286)
chr3 (155-194)||(45568251-45568290)
chr3 (142-194)||(4711725-4711777)
chr3 (142-194)||(6954489-6954541)
chr3 (142-194)||(10229719-10229771)
chr3 (142-194)||(12149576-12149628)
chr3 (142-190)||(20464758-20464806)
chr3 (142-194)||(40487568-40487620)
chr3 (142-194)||(46304314-46304366)
chr3 (142-194)||(47041841-47041893)
chr3 (142-194)||(52922910-52922962)
chr3 (155-186)||(36691472-36691503)
chr3 (155-194)||(43488397-43488436)
chr3 (144-198)||(4822044-4822098)
chr3 (137-175)||(12116363-12116401)
chr3 (156-194)||(44959780-44959818)
chr3 (150-187)||(20252059-20252096)
chr3 (142-175)||(25631302-25631335)
chr3 (142-187)||(25850051-25850096)
chr3 (142-175)||(35498976-35499009)
chr3 (142-175)||(36906387-36906420)
chr3 (161-194)||(38859943-38859976)
chr3 (142-175)||(46934904-46934937)
chr3 (150-186)||(25939170-25939206)
chr3 (143-175)||(38440368-38440400)
chr3 (142-194)||(40556945-40556997)
chr3 (150-186)||(48652117-48652153)
[»] chr1 (29 HSPs)
chr1 (142-194)||(44915886-44915938)
chr1 (142-194)||(7337456-7337508)
chr1 (142-194)||(11462275-11462327)
chr1 (146-194)||(35484188-35484236)
chr1 (144-194)||(21947413-21947463)
chr1 (142-187)||(41081480-41081525)
chr1 (157-194)||(45841198-45841235)
chr1 (142-194)||(14872886-14872938)
chr1 (142-194)||(21687625-21687677)
chr1 (142-194)||(26535583-26535635)
chr1 (142-194)||(27579921-27579973)
chr1 (142-194)||(36894201-36894253)
chr1 (142-194)||(49504388-49504440)
chr1 (155-194)||(29738470-29738509)
chr1 (142-185)||(44637679-44637722)
chr1 (143-194)||(51373652-51373703)
chr1 (144-194)||(23289187-23289237)
chr1 (143-189)||(24583201-24583247)
chr1 (143-189)||(24583397-24583443)
chr1 (142-175)||(7342994-7343027)
chr1 (144-185)||(14716945-14716985)
chr1 (142-175)||(25406060-25406093)
chr1 (142-175)||(51868421-51868454)
chr1 (143-175)||(3871679-3871711)
chr1 (142-194)||(4413361-4413413)
chr1 (143-175)||(11709484-11709516)
chr1 (142-194)||(32395244-32395296)
chr1 (142-190)||(34878071-34878119)
chr1 (143-175)||(45805606-45805638)
[»] scaffold0039 (1 HSPs)
scaffold0039 (142-191)||(93364-93413)
[»] scaffold0121 (1 HSPs)
scaffold0121 (142-194)||(31067-31119)
[»] chr7 (16 HSPs)
chr7 (142-194)||(12141100-12141152)
chr7 (142-194)||(28044549-28044601)
chr7 (155-194)||(37837264-37837303)
chr7 (144-194)||(8001341-8001391)
chr7 (142-194)||(34899400-34899452)
chr7 (143-179)||(37849103-37849139)
chr7 (142-194)||(48061668-48061720)
chr7 (155-194)||(40993403-40993442)
chr7 (142-188)||(24610052-24610098)
chr7 (156-194)||(39171397-39171435)
chr7 (142-175)||(1485032-1485065)
chr7 (142-187)||(20083594-20083639)
chr7 (142-187)||(40741822-40741867)
chr7 (142-194)||(9977003-9977055)
chr7 (143-191)||(25286982-25287030)
chr7 (142-174)||(26583979-26584011)
[»] chr5 (21 HSPs)
chr5 (142-194)||(6011931-6011983)
chr5 (142-194)||(9113518-9113570)
chr5 (149-194)||(19121166-19121211)
chr5 (142-191)||(24229577-24229626)
chr5 (142-194)||(14726254-14726306)
chr5 (142-194)||(26825673-26825725)
chr5 (142-194)||(34945636-34945688)
chr5 (142-194)||(38007600-38007652)
chr5 (142-177)||(36057104-36057139)
chr5 (156-194)||(38598040-38598078)
chr5 (142-175)||(7150111-7150144)
chr5 (142-175)||(7242054-7242087)
chr5 (142-175)||(7247229-7247262)
chr5 (142-175)||(10649912-10649945)
chr5 (142-194)||(11073781-11073831)
chr5 (142-175)||(19280713-19280746)
chr5 (142-194)||(6217141-6217193)
chr5 (142-194)||(13007472-13007524)
chr5 (142-194)||(14082189-14082241)
chr5 (155-187)||(22978713-22978745)
chr5 (142-194)||(35851040-35851092)
[»] scaffold0021 (1 HSPs)
scaffold0021 (149-194)||(4401-4446)
[»] scaffold0634 (1 HSPs)
scaffold0634 (142-194)||(8757-8809)
[»] scaffold0136 (1 HSPs)
scaffold0136 (155-194)||(9848-9887)
[»] scaffold0219 (1 HSPs)
scaffold0219 (157-194)||(14679-14716)
[»] scaffold0157 (1 HSPs)
scaffold0157 (142-187)||(26829-26874)
[»] scaffold0014 (1 HSPs)
scaffold0014 (142-187)||(201149-201194)
[»] scaffold0603 (1 HSPs)
scaffold0603 (142-194)||(7971-8023)


Alignment Details
Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 29300355 - 29300427
Alignment:
Q  59 gaaagcattcttccattacgggaataagtagttaattgttttttcttgttatcacttgttgggatatcacaat 131  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29300355 gaaagcattcttccattacaggaataagtagttaattgttttttcttgttatcacttgttgggatatcacaat 29300427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 606501 - 606449
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  606501 caaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaa 606449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 3913367 - 3913419
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  3913367 caaaaataaaacgatattcattcattcaaatcgatagagtacatcagatacaa 3913419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 12170765 - 12170713
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  12170765 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 12170713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 32327013 - 32327065
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  32327013 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 32327065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 21426492 - 21426531
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  21426492 atattcattcattcaaatcgatagagtacatcagatacaa 21426531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 34185487 - 34185542
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaacat 197  Q
    |||||||||||| |||||||||||||||||| |||| |||| ||||||| ||||||    
T  34185487 caaaaataaaatgatattcattcattcaaattgatagagtatatcagattcaacat 34185542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 67789 - 67846
Alignment:
Q  137 attgtcaaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||| |||||||||||   |||||||||||||||||||||| |||| |||||||||||    
T  67789 attgacaaaaataaaacggtattcattcattcaaatcgatagagtatatcagatacaa 67846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 9341444 - 9341496
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||| ||||||||||||||||||| ||||||||||||||||    
T  9341444 caaaaacaaaacgatactcattcattcaaatcgatagagtacatcagatacaa 9341496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 14174864 - 14174916
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| | ||||||||||||||    
T  14174864 caaaaacaaaacgatattcattcattcaaatcgatatattacatcagatacaa 14174916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 14179400 - 14179452
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| | ||||||||||||||    
T  14179400 caaaaacaaaacgatattcattcattcaaatcgatatattacatcagatacaa 14179452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 29319670 - 29319722
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| ||||||||||||||||||  |||||||| |||||||||||    
T  29319670 caaaaacaaaatgatattcattcattcaaattaataaagtatatcagatacaa 29319722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 32060173 - 32060121
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  |||||||||||||||||| |||| | ||||||||||||||    
T  32060173 caaaaataaaacgatattcattcattcaaattgatatattacatcagatacaa 32060121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 177
Target Start/End: Original strand, 1450529 - 1450564
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgata 177  Q
    |||||||||||| |||||||||||||||||||||||    
T  1450529 caaaaataaaatgatattcattcattcaaatcgata 1450564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 30894894 - 30894843
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||  ||||||||||||||||||||||  | ||||||||||||||    
T  30894894 aaaaataaaacgatattcattcattcaaatcgatggaatacatcagatacaa 30894843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 4984343 - 4984376
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  4984343 caaaaataaaatgatattcattcattcaaatcga 4984376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 7514996 - 7515045
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagata 191  Q
    |||||| ||||  ||||||||||||||||||||||| ||| |||||||||    
T  7514996 caaaaacaaaacgatattcattcattcaaatcgatagagtgcatcagata 7515045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 12168979 - 12168946
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  12168979 caaaaataaaatgatattcattcattcaaatcga 12168946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 25064537 - 25064504
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  25064537 caaaaataaaatgatattcattcattcaaatcga 25064504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 15612378 - 15612410
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatca 187  Q
    ||||||||||||||| |||||||||||||||||    
T  15612378 atattcattcattcagatcgataaagtacatca 15612410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 31851674 - 31851722
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagat 190  Q
    |||||| ||||| |||||||||||||||||| |||| | ||||||||||    
T  31851674 caaaaacaaaataatattcattcattcaaattgatagaatacatcagat 31851722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 33052961 - 33053013
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  |||||||||||||||||| |||| ||||||||| ||||||    
T  33052961 caaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaa 33053013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 1421979 - 1421929
Alignment:
Q  144 aaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  1421979 aaaaaaaaatgatattcattcattcaaatcgataaagtacatcagatacaa 1421929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 4041388 - 4041440
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  4041388 caaaaataaaatgatattcattcattcaaatcgatagtgtacatcagatacaa 4041440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 17248943 - 17248989
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcgataaagtacatcaga 189  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  17248943 aaaaataaaatgatattcattcattcaaatcgataaaatacatcaga 17248989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 1415863 - 1415811
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| ||||||||||||||||||||||| | ||||||||||||||    
T  1415863 caaaaacaaaatgatattcattcattcaaatcgatagattacatcagatacaa 1415811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 5427663 - 5427715
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  5427663 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 5427715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 12553963 - 12554015
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||| |||||||||||||||||| |||| |||| |||||||||||    
T  12553963 caaaaataaaatgatattcattcattcaaattgatagagtatatcagatacaa 12554015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 31193130 - 31193182
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  31193130 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 31193182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 31788762 - 31788710
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  31788762 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 31788710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 38445472 - 38445420
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  38445472 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 38445420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 11985040 - 11985079
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  11985040 atattcattcattcaaatcgatagagtacatcagatacaa 11985079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 7646784 - 7646739
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||||| ||||  |||||||||||||||||||||||||||||||||    
T  7646784 caaaaacaaaacgatattcattcattcaaatcgataaagtacatca 7646739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 4779059 - 4779007
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||| ||||||    
T  4779059 caaaaacaaaactatattcattcattcaaatcgatagagtacatcaaatacaa 4779007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 18763774 - 18763722
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||| ||| ||||||||||||||||    
T  18763774 caaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaa 18763722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 28037389 - 28037345
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    ||||||||||| ||||||||||||||| ||||||| |||||||||    
T  28037389 aaaaataaaatgatattcattcattcagatcgatatagtacatca 28037345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 33924011 - 33923959
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| | ||||||||||||||    
T  33924011 caaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaa 33923959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 36692180 - 36692128
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  |||| |||||||||||||||||| ||||||||||||||||    
T  36692180 caaaaacaaaacgatatacattcattcaaatcgatagagtacatcagatacaa 36692128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 36942916 - 36942968
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||| ||| ||||||||||||||||    
T  36942916 caaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaa 36942968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 459052 - 459097
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||||||||||  ||||||||||||||||||||||| |||| ||||    
T  459052 caaaaataaaacgatattcattcattcaaatcgatagagtatatca 459097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 3268611 - 3268644
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  3268611 caaaaataaaatgatattcattcattcaaatcga 3268644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 8806171 - 8806138
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  8806171 caaaaataaaatgatattcattcattcaaatcga 8806138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 30923251 - 30923296
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  30923251 caaaaacaaaatgatattcattcattcaaattgatagagtacatca 30923296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 32678899 - 32678932
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  32678899 caaaaataaaatgatattcattcattcaaatcga 32678932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 33228764 - 33228797
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  33228764 caaaaataaaatgatattcattcattcaaatcga 33228797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 35220619 - 35220582
Alignment:
Q  157 attcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  35220619 attcattcattcaaattgatagagtacatcagatacaa 35220582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 41431333 - 41431300
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  41431333 caaaaataaaatgatattcattcattcaaatcga 41431300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 11931312 - 11931276
Alignment:
Q  150 aaatcatattcattcattcaaatcgataaagtacatc 186  Q
    |||| |||||||||||||||||| |||||||||||||    
T  11931312 aaatgatattcattcattcaaattgataaagtacatc 11931276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 14416472 - 14416420
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||||    
T  14416472 caaaaacaaaatgatatttattcattcaaattgatagaatacatcagatacaa 14416420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 30399824 - 30399872
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcgataaagtacatcagata 191  Q
    ||||||||||| ||||||||| |||||||| |||  |||||||||||||    
T  30399824 aaaaataaaatgatattcatttattcaaattgatcgagtacatcagata 30399872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 30420973 - 30420941
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcga 175  Q
    ||||||||||| |||||||||||||||||||||    
T  30420973 aaaaataaaatgatattcattcattcaaatcga 30420941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 33585529 - 33585581
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  |||||| |||||||||||| ||| ||||||||||||||||    
T  33585529 caaaaacaaaacgatattctttcattcaaatcaatagagtacatcagatacaa 33585581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 36175306 - 36175358
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||| |||||||||||||||||| || | || |||||| ||||||    
T  36175306 caaaaataaaatgatattcattcattcaaattgacagagaacatcaaatacaa 36175358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 37876400 - 37876452
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  |||||||||||||||||| |||| ||||||||| ||||||    
T  37876400 caaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaa 37876452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 27498157 - 27498209
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  27498157 caaaaataaaataatattcattcattcaaattgatagagtacatcagatacaa 27498209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 40211087 - 40211140
Alignment:
Q  138 ttgtcaaaaataaaatcatattcattcattcaaatcgataaagtacatcagata 191  Q
    |||||||||| ||||  ||||||||||||||||||||||| |||||||||||||    
T  40211087 ttgtcaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagata 40211140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 16928561 - 16928600
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  16928561 atattcattcattcaaatcgatagagtacatcagatacaa 16928600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 23230928 - 23230889
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  23230928 atattcattcattcaaatcgatagagtacatcagatacaa 23230889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 39152918 - 39152961
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacat 185  Q
    |||||||||||  |||||||||||||||||||||||||||||||    
T  39152918 caaaaataaaacgatattcattcattcaaatcgataaagtacat 39152961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 7677072 - 7677117
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||    
T  7677072 caaaaataaaaccatattcattcatttaaatcgatatagtacatca 7677117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 19443844 - 19443893
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagata 191  Q
    |||||||||||  |||||||||||||||||| |||| |||||||||||||    
T  19443844 caaaaataaaacgatattcattcattcaaattgatagagtacatcagata 19443893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 37971594 - 37971533
Alignment:
Q  133 tattattgtcaaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||| ||| |||||||||||  ||||||||||| ||||||| ||| ||||||||||||||||    
T  37971594 tatttttgacaaaaataaaacgatattcattcactcaaatcaatagagtacatcagatacaa 37971533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 7883032 - 7883084
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||| ||| ||||||||||||||||    
T  7883032 caaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaa 7883084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 29939587 - 29939547
Alignment:
Q  154 catattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  29939587 catattcatttattcaaatcgatatagtacatcagatacaa 29939547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 31013399 - 31013451
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||| ||||||||||| ||||||||||||||||||||||||    
T  31013399 caaaaacaaaacgatagtcattcattcatatcgataaagtacatcagatacaa 31013451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 1236489 - 1236536
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcaga 189  Q
    |||||| ||||| ||||||||||||||||||||||| | |||||||||    
T  1236489 caaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga 1236536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 25190869 - 25190908
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  25190869 atattcattcattcaaatcgatagattacatcagatacaa 25190908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 4809272 - 4809239
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  4809272 caaaaataaaatgatattcattcattcaaatcga 4809239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 9073026 - 9072993
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  9073026 caaaaataaaatgatattcattcattcaaatcga 9072993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 9498375 - 9498408
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  9498375 caaaaataaaatgatattcattcattcaaatcga 9498408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 12654371 - 12654326
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||||||||||| ||||| ||||||||||||||||| | |||||||    
T  12654371 caaaaataaaatgatatttattcattcaaatcgatataatacatca 12654326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 29777527 - 29777494
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  29777527 caaaaataaaatgatattcattcattcaaatcga 29777494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 45445601 - 45445654
Alignment:
Q  141 tcaaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||| ||||  ||||||||||||||||||||||  | ||||||||||||||    
T  45445601 tcaaaaacaaaacgatattcattcattcaaatcgatggattacatcagatacaa 45445654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 8412313 - 8412365
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  ||||||||||||||||||| ||| | || |||||||||||    
T  8412313 caaaaataaaacgatattcattcattcaaatcaatagattaaatcagatacaa 8412365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 9637200 - 9637252
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||| |||| |||| ||||||||||||||||    
T  9637200 caaaaacaaaacgatattcattcatttaaattgatagagtacatcagatacaa 9637252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 16247015 - 16247067
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||| ||||||||| |||||||| |||  | ||||||||||||||    
T  16247015 caaaaataaaatgatattcatttattcaaattgatggaatacatcagatacaa 16247067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 28086603 - 28086655
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||| |||||||| |||| ||||||||||||||||    
T  28086603 caaaaacaaaacgatattcatttattcaaattgatatagtacatcagatacaa 28086655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 30568112 - 30568164
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| |||||||||||||||||| |||| | ||||||| ||||||    
T  30568112 caaaaacaaaatgatattcattcattcaaattgatagattacatcatatacaa 30568164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 33214475 - 33214511
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagata 191  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  33214475 atattcattcattcaaatcgatagagtacattagata 33214511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 40618864 - 40618916
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  |||||||||||||||||| |||| | ||||||||||||||    
T  40618864 caaaaacaaaacgatattcattcattcaaattgatagaatacatcagatacaa 40618916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 13634431 - 13634379
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  13634431 caaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaa 13634379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 21686029 - 21686087
Alignment:
Q  136 tattgtcaaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||| |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  21686029 tattgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 21686087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 19853305 - 19853357
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  19853305 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 19853357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 26633464 - 26633516
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  26633464 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 26633516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 32766830 - 32766778
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  32766830 caaaaacaaaacaatattcattcattcaaatcgatagagtacatcagatacaa 32766778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 56040439 - 56040491
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  56040439 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 56040491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 24098875 - 24098914
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  24098875 atattcattcattcaaatcgatagagtacatcagatacaa 24098914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 43510499 - 43510460
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  43510499 atattcattcattcaaatcgataaagtacatcaaatacaa 43510460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 48257438 - 48257477
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  48257438 atattcattcattcaaatcgatagagtacatcagatacaa 48257477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 43853771 - 43853718
Alignment:
Q  141 tcaaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||  |||||||||||||||||| |||| | ||||||||||||||    
T  43853771 tcaaaaataaaacgatattcattcattcaaattgatagaatacatcagatacaa 43853718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 2521095 - 2521043
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  2521095 caaaaacaaaacgatattcattcattcaaatcgatagagtccatcagatacaa 2521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 4142557 - 4142609
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||| ||||||    
T  4142557 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaa 4142609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 36162038 - 36161986
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||| |||||||||||||||||| |||| | ||||||| ||||||    
T  36162038 caaaaataaaatgatattcattcattcaaattgatagaatacatcaaatacaa 36161986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 47320193 - 47320253
Alignment:
Q  129 aatatattattgtcaaaaataaaatcatattcattcattcaaatcgataaagtacatcaga 189  Q
    ||||| || ||| |||||| ||||| ||||||||||||||||||||||| | |||||||||    
T  47320193 aatatttttttgacaaaaacaaaattatattcattcattcaaatcgatagaatacatcaga 47320253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 17949129 - 17949168
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  17949129 atattcattcattcaaatcgatagagtatatcagatacaa 17949168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 17952981 - 17953020
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  17952981 atattcattcattcaaatcgatagagtatatcagatacaa 17953020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 46990909 - 46990952
Alignment:
Q  144 aaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||    
T  46990909 aaaaaaaaatgatattcattcattcaaatcgatagagtacatca 46990952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 32952541 - 32952579
Alignment:
Q  149 aaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  32952541 aaaatgatattcattcattcaaatcgatagagtacatca 32952579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 1532221 - 1532188
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  1532221 caaaaataaaatgatattcattcattcaaatcga 1532188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 4644171 - 4644138
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  4644171 caaaaataaaatgatattcattcattcaaatcga 4644138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 8670795 - 8670750
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||||||||||  ||||||||||||||||||||||| | |||||||    
T  8670795 caaaaataaaacgatattcattcattcaaatcgatagattacatca 8670750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 10258709 - 10258746
Alignment:
Q  157 attcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  10258709 attcattcattcaaattgatagagtacatcagatacaa 10258746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 10389530 - 10389563
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  10389530 caaaaataaaatgatattcattcattcaaatcga 10389563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 12493648 - 12493603
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||||||||||| ||||||||||||| |||| |||| |||||||||    
T  12493648 caaaaataaaatgatattcattcattaaaattgatagagtacatca 12493603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 38706486 - 38706519
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||| |||||||||||||||||||||||||||    
T  38706486 caaaaacaaaatcatattcattcattcaaatcga 38706519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 6155002 - 6155054
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| |||||||||||||||||| |||| | ||||| ||||||||    
T  6155002 caaaaacaaaatgatattcattcattcaaattgatagaatacattagatacaa 6155054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 18138706 - 18138738
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatca 187  Q
    ||||||||||||||||||| |||||||||||||    
T  18138706 atattcattcattcaaatcaataaagtacatca 18138738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 22611506 - 22611454
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||| ||||||| ||||||||| ||||||||||||||||    
T  22611506 caaaaacaaaacgatatttattcatttaaatcgatagagtacatcagatacaa 22611454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 40065987 - 40066039
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| || | |||||||||||    
T  40065987 caaaaacaaaacaatattcattcattcaaatcgatagagaagatcagatacaa 40066039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 49125919 - 49125951
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatca 187  Q
    ||||||||||||||||||| |||||||||||||    
T  49125919 atattcattcattcaaatcaataaagtacatca 49125951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 53444435 - 53444383
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| |||||||||||||||||| |||| | ||||| ||||||||    
T  53444435 caaaaacaaaataatattcattcattcaaatagatagattacattagatacaa 53444383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 21533602 - 21533654
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  21533602 caaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaa 21533654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 48650527 - 48650579
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  48650527 caaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaa 48650579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 36910559 - 36910608
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagata 191  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  36910559 caaaaataaaacgatattcattcattcaaatcgatagagtacatcagata 36910608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 9797327 - 9797379
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  9797327 caaaaacaaaacgatattcattcattcaaatcgatatagtacatcagatacaa 9797379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 9998762 - 9998710
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| ||||||    
T  9998762 caaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaa 9998710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 10108531 - 10108479
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| ||||||    
T  10108531 caaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaa 10108479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 10233365 - 10233313
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| ||||||    
T  10233365 caaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaa 10233313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 21431910 - 21431858
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  | ||||||||||||||||||||| ||||||||||||||||    
T  21431910 caaaaataaaacgacattcattcattcaaatcgatagagtacatcagatacaa 21431858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 43017183 - 43017131
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  43017183 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 43017131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 54149286 - 54149234
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||| |||  ||||||||||||||||||||||| ||||||||||||||||    
T  54149286 caaaaattaaacgatattcattcattcaaatcgatagagtacatcagatacaa 54149234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 45568251 - 45568290
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  45568251 atattcattcattcaaatcgatagagtacatcagatacaa 45568290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 4711777 - 4711725
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  |||||||||||  |||||||||| ||||||||||||||||    
T  4711777 caaaaataaaacgatattcattcaaccaaatcgatagagtacatcagatacaa 4711725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 6954489 - 6954541
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||| ||||||||||    
T  6954489 caaaaacaaaacgatattcattcattcaaatcgatagagtacttcagatacaa 6954541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 10229771 - 10229719
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  ||||||||||||||||||||||| |||| |||| ||||||    
T  10229771 caaaaataaaacgatattcattcattcaaatcgatagagtatatcaaatacaa 10229719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 12149576 - 12149628
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  |||||| |||||||||||||||||| |||||| |||||||    
T  12149576 caaaaataaaacgatattccttcattcaaatcgataaaatacatctgatacaa 12149628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 20464758 - 20464806
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagat 190  Q
    |||||| ||||| |||||||||||||||||| |||| ||||||||||||    
T  20464758 caaaaacaaaatgatattcattcattcaaattgatagagtacatcagat 20464806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 40487620 - 40487568
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| |||| |||||||||||    
T  40487620 caaaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaa 40487568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 46304314 - 46304366
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  |||||||||||||||||| |||| ||||||||||||||||    
T  46304314 caaaaacaaaacgatattcattcattcaaattgatagagtacatcagatacaa 46304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 47041841 - 47041893
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| |||||||||||||||||| |||| | ||||||||||||||    
T  47041841 caaaaacaaaatgatattcattcattcaaatagatagattacatcagatacaa 47041893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 52922910 - 52922962
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||| ||||||    
T  52922910 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaa 52922962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 186
Target Start/End: Original strand, 36691472 - 36691503
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatc 186  Q
    ||||||||||||||||||||||||||||||||    
T  36691472 atattcattcattcaaatcgataaagtacatc 36691503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 43488397 - 43488436
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  43488397 atattcattcattcaaatcgatagagtacattagatacaa 43488436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 4822098 - 4822044
Alignment:
Q  144 aaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaacatt 198  Q
    |||||||||| |||||||||||||||||| |||||| ||||| |||  |||||||    
T  4822098 aaaataaaatgatattcattcattcaaattgataaaatacattagaatcaacatt 4822044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 12116401 - 12116363
Alignment:
Q  137 attgtcaaaaataaaatcatattcattcattcaaatcga 175  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  12116401 attgacaaaaataaaatgatattcattcattcaaatcga 12116363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 44959780 - 44959818
Alignment:
Q  156 tattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  44959780 tattcattcattcaaatcgatagaatacatcagatacaa 44959818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 20252096 - 20252059
Alignment:
Q  150 aaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  20252096 aaatgatattcattcattcaaattgataaagtacatca 20252059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 25631302 - 25631335
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  25631302 caaaaataaaatgatattcattcattcaaatcga 25631335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 25850096 - 25850051
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||||| ||||  ||||||||||||||||||| |||||||||||||    
T  25850096 caaaaacaaaacgatattcattcattcaaatcaataaagtacatca 25850051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 35498976 - 35499009
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  35498976 caaaaataaaatgatattcattcattcaaatcga 35499009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 36906420 - 36906387
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  36906420 caaaaataaaatgatattcattcattcaaatcga 36906387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 194
Target Start/End: Original strand, 38859943 - 38859976
Alignment:
Q  161 attcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||| ||||||||||||||||    
T  38859943 attcattcaaatcgatagagtacatcagatacaa 38859976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 46934937 - 46934904
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  46934937 caaaaataaaatgatattcattcattcaaatcga 46934904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 25939170 - 25939206
Alignment:
Q  150 aaatcatattcattcattcaaatcgataaagtacatc 186  Q
    |||| |||||||||||||||||| |||||||||||||    
T  25939170 aaatgatattcattcattcaaattgataaagtacatc 25939206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 38440368 - 38440400
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcga 175  Q
    ||||||||||| |||||||||||||||||||||    
T  38440368 aaaaataaaatgatattcattcattcaaatcga 38440400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 40556997 - 40556945
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||| | ||||||||| ||||||    
T  40556997 caaaaacaaaacgatattcattcattcaaatcgacatagtacatcaaatacaa 40556945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 48652117 - 48652153
Alignment:
Q  150 aaatcatattcattcattcaaatcgataaagtacatc 186  Q
    |||| |||||||||||||||||| |||||||||||||    
T  48652117 aaatgatattcattcattcaaattgataaagtacatc 48652153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 44915938 - 44915886
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  44915938 caaaaataaaatgatattcattcattcaaattgatagagtacatcagatacaa 44915886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 7337456 - 7337508
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||| ||  ||||||||||||||||||||||| ||||||||||||||||    
T  7337456 caaaaatataacgatattcattcattcaaatcgatagagtacatcagatacaa 7337508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 11462275 - 11462327
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  11462275 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 11462327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 35484188 - 35484236
Alignment:
Q  146 aataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  35484188 aataaaacgatattcattcattcaaatcgatagagtacatcagatacaa 35484236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 21947413 - 21947463
Alignment:
Q  144 aaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||  ||||||||||||||||||||||| ||||||||| ||||||    
T  21947413 aaaataaaacgatattcattcattcaaatcgatagagtacatcatatacaa 21947463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 41081480 - 41081525
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||||| ||||| ||||||||||||||||||||||| |||||||||    
T  41081480 caaaaacaaaatgatattcattcattcaaatcgatagagtacatca 41081525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 45841235 - 45841198
Alignment:
Q  157 attcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  45841235 attcattcattcaaatcgataaagtacatcaaatacaa 45841198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 14872938 - 14872886
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| ||||||||||||| ||||||||| ||||||||| ||||||    
T  14872938 caaaaacaaaatgatattcattcatttaaatcgatagagtacatcacatacaa 14872886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 21687677 - 21687625
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| | ||||||||||||||    
T  21687677 caaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaa 21687625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 26535635 - 26535583
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  |||||||||||||||||| |||| ||||||||||||||||    
T  26535635 caaaaacaaaacgatattcattcattcaaattgatagagtacatcagatacaa 26535583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 27579921 - 27579973
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||| ||||||||| |||||||| |||| ||||||||| ||||||    
T  27579921 caaaaataaaataatattcatttattcaaattgatagagtacatcatatacaa 27579973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 36894201 - 36894253
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||| ||||||    
T  36894201 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaa 36894253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 49504388 - 49504440
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||| ||||||||    
T  49504388 caaaaacaaaacgatattcattcattcaaatcgatagagtacataagatacaa 49504440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 29738470 - 29738509
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  29738470 atattcaatcattcaaatcgatagagtacatcagatacaa 29738509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 44637722 - 44637679
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacat 185  Q
    |||||||||||| |||||||||||||| |||||||| |||||||    
T  44637722 caaaaataaaatgatattcattcattccaatcgatagagtacat 44637679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 51373652 - 51373703
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||  || ||||||||||||||| |||||||||||| ||||||||    
T  51373652 aaaaataaaacgatgttcattcattcaaattgataaagtacattagatacaa 51373703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 23289187 - 23289237
Alignment:
Q  144 aaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||  ||||||||||||||||||||||| | ||||||| ||||||    
T  23289187 aaaataaaacgatattcattcattcaaatcgatagattacatcatatacaa 23289237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 24583247 - 24583201
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcgataaagtacatcaga 189  Q
    ||||| ||||| ||||||||||||||||||||||| | |||||||||    
T  24583247 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga 24583201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 24583443 - 24583397
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcgataaagtacatcaga 189  Q
    ||||| ||||| ||||||||||||||||||||||| | |||||||||    
T  24583443 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga 24583397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 7343027 - 7342994
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  7343027 caaaaataaaatgatattcattcattcaaatcga 7342994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 14716945 - 14716985
Alignment:
Q  144 aaaataaaatcatattcattcattcaaatcgataaagtacat 185  Q
    |||||||||| |||||||||||||||||| ||||||||||||    
T  14716945 aaaataaaat-atattcattcattcaaattgataaagtacat 14716985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 25406060 - 25406093
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  25406060 caaaaataaaatgatattcattcattcaaatcga 25406093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 51868421 - 51868454
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  51868421 caaaaataaaatgatattcattcattcaaatcga 51868454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 3871711 - 3871679
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcga 175  Q
    ||||||||||| |||||||||||||||||||||    
T  3871711 aaaaataaaatgatattcattcattcaaatcga 3871679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 4413413 - 4413361
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||| |||| |||||||||||| ||||||||||||||||    
T  4413413 caaaaacaaaacgatatttattcgttcaaatcgatagagtacatcagatacaa 4413361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 11709484 - 11709516
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcga 175  Q
    ||||||||||| |||||||||||||||||||||    
T  11709484 aaaaataaaatgatattcattcattcaaatcga 11709516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 32395296 - 32395244
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  |||||||| |||||||||||||| ||||||||| ||||||    
T  32395296 caaaaacaaaacgatattcatccattcaaatcgatagagtacatcaaatacaa 32395244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 34878071 - 34878119
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagat 190  Q
    |||||| ||||  ||||||||||||||||||||||| | ||||||||||    
T  34878071 caaaaacaaaacgatattcattcattcaaatcgatagattacatcagat 34878119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 45805606 - 45805638
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcga 175  Q
    ||||||||||| |||||||||||||||||||||    
T  45805606 aaaaataaaatgatattcattcattcaaatcga 45805638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 93413 - 93364
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagata 191  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  93413 caaaaataaaatgatattcattcattcaaattgataaaatacatcagata 93364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 31067 - 31119
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  |||||||||||||||||| |||| ||||||||||||||||    
T  31067 caaaaataaaacgatattcattcattcaaattgatatagtacatcagatacaa 31119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 12141100 - 12141152
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  12141100 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 12141152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 28044549 - 28044601
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  28044549 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 28044601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 37837264 - 37837303
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  37837264 atattcattcattcaaatcgatagagtacatcagatacaa 37837303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 8001341 - 8001391
Alignment:
Q  144 aaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  8001341 aaaataaaacgatattcattcattcaaatcgatagagtgcatcagatacaa 8001391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 34899400 - 34899452
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||| ||||| |||||||||||| |||| ||||||||| ||||||    
T  34899400 caaaaataaaatgatatttattcattcaaattgatagagtacatcaaatacaa 34899452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 37849139 - 37849103
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcgataaa 179  Q
    ||||||||||| |||||||||||||||||||||||||    
T  37849139 aaaaataaaatgatattcattcattcaaatcgataaa 37849103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 48061720 - 48061668
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| |||||||||| |||||    
T  48061720 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcaggtacaa 48061668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 40993442 - 40993403
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  40993442 atattcattcatttaaatcgatagagtacatcagatacaa 40993403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 24610052 - 24610098
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcag 188  Q
    |||||||||||| |||||||||||||||||| |||| | ||||||||    
T  24610052 caaaaataaaatgatattcattcattcaaattgatataatacatcag 24610098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 39171397 - 39171435
Alignment:
Q  156 tattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  39171397 tatttattcattcaaatcgatagagtacatcagatacaa 39171435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 1485032 - 1485065
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  1485032 caaaaataaaatgatattcattcattcaaatcga 1485065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 20083639 - 20083594
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||||| ||||| ||||| ||||||||||||||||| |||||||||    
T  20083639 caaaaacaaaatgatatttattcattcaaatcgatatagtacatca 20083594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 40741867 - 40741822
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||||||||||| ||||| |||||||||||| |||| |||||||||    
T  40741867 caaaaataaaatgatattaattcattcaaattgatatagtacatca 40741822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 9977003 - 9977055
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||| |||| |||| ||||||||||||||||    
T  9977003 caaaaacaaaacgatattcattcatttaaattgatagagtacatcagatacaa 9977055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 25286982 - 25287030
Alignment:
Q  143 aaaaataaaatcatattcattcattcaaatcgataaagtacatcagata 191  Q
    ||||||||||  ||||| |||||||||||| |||| |||||||||||||    
T  25286982 aaaaataaaacgatatttattcattcaaattgatagagtacatcagata 25287030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 26584011 - 26583979
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcg 174  Q
    |||||||||||| ||||||||||||||||||||    
T  26584011 caaaaataaaatgatattcattcattcaaatcg 26583979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 6011931 - 6011983
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  6011931 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 6011983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 9113518 - 9113570
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  9113518 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaa 9113570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 19121211 - 19121166
Alignment:
Q  149 aaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||    
T  19121211 aaaattatattcattcattcaaattgataaactacatcagatacaa 19121166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 24229577 - 24229626
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagata 191  Q
    |||||| ||||  ||||||||||||||||||||||| |||||||||||||    
T  24229577 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagata 24229626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 14726254 - 14726306
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| | ||||||||||||||    
T  14726254 caaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaa 14726306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 26825725 - 26825673
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  ||||||||||||||||||||||| |||| |||| ||||||    
T  26825725 caaaaataaaacgatattcattcattcaaatcgatagagtatatcaaatacaa 26825673  T

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Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 34945688 - 34945636
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  |||||| |||||| ||||||||| ||||||||||||||||    
T  34945688 caaaaataaaacgatattctttcattaaaatcgatagagtacatcagatacaa 34945636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 38007652 - 38007600
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  ||||||||||||||||||||||| | ||||||||||||||    
T  38007652 caaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaa 38007600  T

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Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 177
Target Start/End: Original strand, 36057104 - 36057139
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgata 177  Q
    |||||||||||| |||||||||||||||||||||||    
T  36057104 caaaaataaaatgatattcattcattcaaatcgata 36057139  T

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Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 38598078 - 38598040
Alignment:
Q  156 tattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  38598078 tattcattcattcaaattgatagagtacatcagatacaa 38598040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 7150111 - 7150144
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  7150111 caaaaataaaatgatattcattcattcaaatcga 7150144  T

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Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 7242087 - 7242054
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  7242087 caaaaataaaatgatattcattcattcaaatcga 7242054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 7247262 - 7247229
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  7247262 caaaaataaaatgatattcattcattcaaatcga 7247229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 10649945 - 10649912
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  10649945 caaaaataaaatgatattcattcattcaaatcga 10649912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 11073781 - 11073831
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||| ||||||||||||||||||  ||| ||||||||| ||||||    
T  11073781 caaaaataaaatgatattcattcattcaaat--atagagtacatcatatacaa 11073831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 19280713 - 19280746
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcga 175  Q
    |||||||||||| |||||||||||||||||||||    
T  19280713 caaaaataaaatgatattcattcattcaaatcga 19280746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 6217193 - 6217141
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  |||||||||||||||||| |||| ||| ||||| ||||||    
T  6217193 caaaaataaaacgatattcattcattcaaattgatatagtgcatcaaatacaa 6217141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 13007524 - 13007472
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  |||||||||||||||||| |||| ||||||||| ||||||    
T  13007524 caaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaa 13007472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 14082189 - 14082241
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  |||| |||||||||||||||||| || |||||||||||||    
T  14082189 caaaaacaaaacgatatccattcattcaaatcgatagagcacatcagatacaa 14082241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 22978713 - 22978745
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatca 187  Q
    |||||||||||||| ||||||||||||||||||    
T  22978713 atattcattcattctaatcgataaagtacatca 22978745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 35851092 - 35851040
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||| ||||||||||||||||||| ||| | || |||||||||||    
T  35851092 caaaaacaaaatgatattcattcattcaaatcaatagattatatcagatacaa 35851040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 4446 - 4401
Alignment:
Q  149 aaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||    
T  4446 aaaataatattcattcattcaaattgataaaatacatcagatacaa 4401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 8809 - 8757
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||  |||||| |||||||||||||||||| |||||| |||||||    
T  8809 caaaaataaaacgatattccttcattcaaatcgataaaatacatctgatacaa 8757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 9848 - 9887
Alignment:
Q  155 atattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  9848 atattcattcattcaaatcgatagagtacaccagatacaa 9887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 14679 - 14716
Alignment:
Q  157 attcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  14679 attcattcattcaaattgataaagtacatcatatacaa 14716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 26829 - 26874
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||||||||||| ||||||||||||| |||| |||| |||||||||    
T  26829 caaaaataaaatgatattcattcattaaaattgatagagtacatca 26874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 201149 - 201194
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatca 187  Q
    |||||| ||||| ||||||||||||||||||||||| | |||||||    
T  201149 caaaaacaaaatgatattcattcattcaaatcgatagattacatca 201194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 8023 - 7971
Alignment:
Q  142 caaaaataaaatcatattcattcattcaaatcgataaagtacatcagatacaa 194  Q
    |||||| ||||  |||||||||||||||||| |||| ||||||||| ||||||    
T  8023 caaaaaaaaaacgatattcattcattcaaattgatagagtacatcaaatacaa 7971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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