View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8893_low_45 (Length: 321)
Name: NF8893_low_45
Description: NF8893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8893_low_45 |
 | |
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| [»] chr2 (10 HSPs) |
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| [»] chr7 (7 HSPs) |
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| [»] chr1 (7 HSPs) |
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| [»] chr8 (5 HSPs) |
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| [»] chr3 (10 HSPs) |
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| [»] chr6 (10 HSPs) |
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| [»] chr5 (12 HSPs) |
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| [»] scaffold0175 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 250; Significance: 1e-139; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 3153413 - 3153734
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3153413 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcaacaaattaaaacttggatcggtgtgttttttgt |
3153512 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3153513 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
3153612 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| | | | ||||| ||||||| | ||||||||| |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
3153613 |
atttgggttctttggaatgaaagaaataatagattgtttgtcaacacagctaaaacaacagagcaacttcttgagaaggttaagattacatctctcaaat |
3153712 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
3153713 |
ggttgaaagcaaaaaatgtgtg |
3153734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 44940195 - 44939874
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| ||| |
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|
| T |
44940195 |
gttgtggacaaaatgaaacaatagactacttaattattcattgtcctatttttggtgctctctggcaacaaattaaaacttggattggtgtgttttctgt |
44940096 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
44940095 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtggttatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
44939996 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
||||||||| |||||||| ||||||| | | | ||||| ||||||| | ||||||||| |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
44939995 |
atttgggttatttggaataaaagaaattatagattgtttgtcaacacagctaaaacaacagagcaacttcttgagaaggttaagattacatctctcaaat |
44939896 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
44939895 |
ggttgaaagcaaaaaatgtgtg |
44939874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 79740 - 79419
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| ||||||||||||||||| |||||||||| ||| |
|
|
| T |
79740 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggtgatctccggcaacaaattaaaacttggattggtgtgttttctgt |
79641 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| || ||||||||| |
|
|
| T |
79640 |
ggatcctcatcagattttggaccattattatcagtttgtttattctttgggtggttatgctcaaagaaggtcttttcttcatttgatctgactttgtggt |
79541 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| | | | ||||| ||||||||| ||||||||| ||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
79540 |
atttgggttctttggaatgaaagaaataatagattgtttgtcaacacaactaaaacaacagaacaacttcttgagaaggttaagattacatctctcaaat |
79441 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
|||| |||||||||||| |||| |
|
|
| T |
79440 |
ggttaaaagcaaaaaatgtgtg |
79419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 39768312 - 39768544
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
||||| ||||||||||||||||| || |||| |||||||||||| ||||||| ||||||||||| ||||| ||||| | ||||||| |||||||| |
|
|
| T |
39768312 |
tgtggccaaaatgaaacaatagatcatataataattcattgtcctctttttggcaatctctggcagcttattaagtcttggcttggtgtgtattttgtgg |
39768411 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtat |
202 |
Q |
| |
|
|||| || || ||| | |||| | |||| |||||||| |||||||||| ||| | || | ||||||| | ||| |||||||||||||| |||| |
|
|
| T |
39768412 |
atccccaacatgttacaggtcattgtaatcaatttgtttactcttcaggtggttacggtctgtgccggtctttcttacatgtgatttggctttgtagtat |
39768511 |
T |
|
| Q |
203 |
ttgggttctttggaatgaaagaaaccaaaaact |
235 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||| |
|
|
| T |
39768512 |
ttgggttctttggaatgaaaggaaccataaact |
39768544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 10060038 - 10059986
Alignment:
| Q |
269 |
cttgagaaggttaaaattacatctttcaaatggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
10060038 |
cttgagaaggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtg |
10059986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 2177231 - 2177084
Alignment:
| Q |
15 |
gaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtggatcctcatcagg |
114 |
Q |
| |
|
||||| ||||| || ||||| |||||||| ||||||||| | ||| ||| |||| ||||| ||||||| ||||||| ||| |||||||| || |||| |
|
|
| T |
2177231 |
gaaaccatagatcatttaataattcattgcaatatttttggtgatctttggaagcatattaagtcttggattggtgtgtatttagtggatccccaacagg |
2177132 |
T |
|
| Q |
115 |
ttttggaccattattatcagtttgtttattcttcaggtgattatgctc |
162 |
Q |
| |
|
|| ||| |||| |||||| |||||| |||||||||||| ||||||| |
|
|
| T |
2177131 |
ttacggatcatttttatcaatttgttcattcttcaggtgcatatgctc |
2177084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 34385600 - 34385537
Alignment:
| Q |
166 |
gaaggtcttttcttcatttgatttggctttgtggtatttgggttctttggaatgaaagaaacca |
229 |
Q |
| |
|
||||||| ||| | |||||||||||||||| | |||||||||| |||||||||||||| ||||| |
|
|
| T |
34385600 |
gaaggtcatttttacatttgatttggctttattgtatttgggtcctttggaatgaaaggaacca |
34385537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 6469255 - 6469204
Alignment:
| Q |
180 |
catttgatttggctttgtggtatttgggttctttggaatgaaagaaaccaaa |
231 |
Q |
| |
|
|||||||||||||||||| | ||||||||| |||| ||||||||||| |||| |
|
|
| T |
6469255 |
catttgatttggctttgttgcatttgggttatttgaaatgaaagaaatcaaa |
6469204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 23290278 - 23290204
Alignment:
| Q |
30 |
ttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtggat |
104 |
Q |
| |
|
||||||||||||||||||| |||||| |||| ||||| || |||||| |||| | ||||||| |||||||||| |
|
|
| T |
23290278 |
ttaattattcattgtcctaattttggttctctttggcaacatgttaaaaattggcttggtgtgtattttgtggat |
23290204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 32171113 - 32171068
Alignment:
| Q |
184 |
tgatttggctttgtggtatttgggttctttggaatgaaagaaacca |
229 |
Q |
| |
|
|||||||||||||| ||||||||||||| | ||||||||| ||||| |
|
|
| T |
32171113 |
tgatttggctttgttgtatttgggttctatcgaatgaaaggaacca |
32171068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 4164004 - 4163683
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4164004 |
gttgtggacaaaatgaaacaatagacctcttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
4163905 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4163904 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
4163805 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| | | | ||||| ||||||| | || |||||| |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
4163804 |
atttgggttctttggaatgaaagaaataatagattgtttgtcaacacagctaatacaacagagcaacttcttgagaaggttaagattacatctctcaaat |
4163705 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
4163704 |
ggttgaaagcaaaaaatgtgtg |
4163683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 34206295 - 34205974
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
34206295 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcaacaaattaaaacttggatcggtgtgttttttgt |
34206196 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
34206195 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaatgtcttttcttcatttgatttggctttgtggt |
34206096 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| | | | ||||| ||||||| | ||||||||| |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
34206095 |
atttgggttctttggaatgaaagaaataatagattgtttgtcaacacagctaaaacaacagagcaacttcttgagaaggttaagattacatctctcaaat |
34205996 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
34205995 |
ggttgaaagcaaaaaatgtgtg |
34205974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 3 - 321
Target Start/End: Original strand, 43109081 - 43109400
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
43109081 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcaacaaattaaaacttggatcggtgtgttttttgtgg |
43109180 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtat |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
43109181 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaagtcttttcttcatttgatttggctttgtggtat |
43109280 |
T |
|
| Q |
203 |
ttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatgg |
301 |
Q |
| |
|
|||||||||||||||||||||||| | | | ||||| ||||||| | || |||||| |||| | |||||||||||||| ||||||||| |||||||| |
|
|
| T |
43109281 |
ttgggttctttggaatgaaagaaataatagattgtttgtcaacacagctaatacaacagagcaacttcttgagaaggttaagattacatctctcaaatgg |
43109380 |
T |
|
| Q |
302 |
ttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
43109381 |
ttgaaagcaaaaaatgtgtg |
43109400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 321
Target Start/End: Complemental strand, 45459395 - 45459076
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
|||||| ||||||||||||| || ||||||||||||||||||||||||||||| | | ||||| ||||||||||||||||| ||| |||||| ||||| |
|
|
| T |
45459395 |
tgtggaaaaaatgaaacaattgatcacttaattattcattgtcctatttttggcgacttatggcaacaaattaaaacttggattggtctgttttctgtgg |
45459296 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtat |
202 |
Q |
| |
|
| | || ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
45459295 |
acctccaacaggttttggaccattattatcagtttgtttattcttcaggtggttatacttcaagaaggtattttcttcaattgatttggctttgtggtat |
45459196 |
T |
|
| Q |
203 |
ttgggttctttggaatgaaagaaaccaaaaactgtttac-aacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatgg |
301 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| || | |||||| ||| ||||||| |||||||||||||||||||||| ||||||||| |||| ||| |
|
|
| T |
45459195 |
ttgggttctttggaatgaaagaaaccaaagactggttgctaacacagcaagaacaacagtgcaattacttgagaaggttaagattacatctctcaagtgg |
45459096 |
T |
|
| Q |
302 |
ttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
45459095 |
ttgaaagcaaaaaatgtgtg |
45459076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 93 - 321
Target Start/End: Original strand, 39295640 - 39295869
Alignment:
| Q |
93 |
ttttttgtggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggc |
192 |
Q |
| |
|
|||| |||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||| ||| || || | |||||||||| ||||||||||||| |
|
|
| T |
39295640 |
ttttctgtggaccctcaacaggttttggatcattattatcagtttgtttactcttcaggtggttacacttcacaatggtcttttctacatttgatttggc |
39295739 |
T |
|
| Q |
193 |
tttgtggtatttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatc |
291 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| ||| ||| ||||||||| ||||||||| ||||||||||||||||||||| |||| ||| |
|
|
| T |
39295740 |
tttgtggtatttggattctttggaatgaaagaaaccaaagactatttgccaacacaactaaaacaacaacgcaattacttgagaaggttaagattatatc |
39295839 |
T |
|
| Q |
292 |
tttcaaatggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
| ||| |||||||||| |||||||| |||| |
|
|
| T |
39295840 |
tctcagatggttgaaaacaaaaaatgtgtg |
39295869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 5651775 - 5651870
Alignment:
| Q |
135 |
tttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtatttgggttctttggaatgaaagaaaccaaa |
231 |
Q |
| |
|
||||||| |||||||||| |||||||||| | |||||||||| ||| ||||||||||| || | |||||||| |||||||||||||||||||||| |
|
|
| T |
5651775 |
tttgttttctcttcaggtggttatgctccacgtcggtcttttctacatctgatttggcttagtag-atttgggtcctttggaatgaaagaaaccaaa |
5651870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 45846169 - 45846220
Alignment:
| Q |
180 |
catttgatttggctttgtggtatttgggttctttggaatgaaagaaaccaaa |
231 |
Q |
| |
|
||||||||||| |||||| |||| ||||| |||||||| ||||||||||||| |
|
|
| T |
45846169 |
catttgatttgactttgtagtatctgggtcctttggaacgaaagaaaccaaa |
45846220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 10386088 - 10386409
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10386088 |
gttgtggacaaaatgaaacaatagacctcttaattattcattgtcctatttttggagctctctggcatcaaattaaaacttggatcggtgtgttttttgt |
10386187 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10386188 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaatgtcttttcttcatttgatttggctttgtggt |
10386287 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| | | | ||||| ||||||| | || |||||| |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
10386288 |
atttgggttctttggaatgaaagaaataatagattgtttgtcaacacagctaatacaacagagcaacttcttgagaaggttaagattacatctctcaaat |
10386387 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
10386388 |
ggttgaaagcaaaaaatgtgtg |
10386409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 259
Target Start/End: Complemental strand, 51169922 - 51169787
Alignment:
| Q |
125 |
ttattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtatttgggttctttggaatgaaaga |
224 |
Q |
| |
|
||||||||| |||||| | |||||||||| ||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
51169922 |
ttattatcaatttgttcactcttcaggtggttatgctccccgtaggtctttccttcatttgatttggctttgtggtatttgggtcgtttggaatgaaaga |
51169823 |
T |
|
| Q |
225 |
aaccaaaaactgtttac-aacacaacaaaaacaaca |
259 |
Q |
| |
|
|| |||| ||| ||||| |||||| | ||||||||| |
|
|
| T |
51169822 |
aatcaaagactctttacaaacacagctaaaacaaca |
51169787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 231
Target Start/End: Original strand, 36193073 - 36193203
Alignment:
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
||||||||| |||||| ||| |||| |||| ||| ||||||||||||| | ||||||||| | | |||||||| |||||||||||||| ||| | |
|
|
| T |
36193073 |
ggatcctcaacaggttacggatcatttccatcaatttatttattcttcaggcggttatgctcctcgtcgatcttttctacatttgatttggctctgttgc |
36193172 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaa |
231 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |
|
|
| T |
36193173 |
atttgggttatttggaatgaaagaaatcaaa |
36193203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 35368204 - 35368328
Alignment:
| Q |
99 |
gtggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtg |
198 |
Q |
| |
|
|||||||||||||| ||| ||| |||| |||| ||| |||| |||||||||| ||||||||| | | |||||||| |||||||||||||| ||| |
|
|
| T |
35368204 |
gtggatcctcatcaagttacggatcatttccatcaatttatttactcttcaggtggttatgctcctcgtcgatcttttctacatttgatttggctatgtt |
35368303 |
T |
|
| Q |
199 |
gtatttgggttctttggaatgaaag |
223 |
Q |
| |
|
| ||||||||| ||||||||||||| |
|
|
| T |
35368304 |
gcatttgggttatttggaatgaaag |
35368328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 31072160 - 31071934
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
||||| ||||||||||||||||| || |||||||||||||| ||| | ||||| || ||||| | ||||| ||||||| ||||||| || |||| |
|
|
| T |
31072160 |
tgtggccaaaatgaaacaatagatcatttaattattcattgccctgtctttggcaacctttggcaacttattaagtcttggattggtgtgtattcggtgg |
31072061 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtat |
202 |
Q |
| |
|
|||| || |||||| || |||| | | || |||||| | || ||| ||| ||| ||||| | |||| || | ||||||||||| |||||| |||| |
|
|
| T |
31072060 |
atccccaacaggttacagatcattttcaccaatttgttcactcctcaagtggttacgctccgcgtcggtcattattacatttgatttgcctttgttgtat |
31071961 |
T |
|
| Q |
203 |
ttgggttctttggaatgaaagaaacca |
229 |
Q |
| |
|
|||||| |||||||| ||||||||||| |
|
|
| T |
31071960 |
ttgggtcctttggaacgaaagaaacca |
31071934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 48433977 - 48433885
Alignment:
| Q |
139 |
tttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtatttgggttctttggaatgaaagaaaccaaa |
231 |
Q |
| |
|
||||||||||||||| |||||||| | |||| ||| | |||||||||||||| ||| | ||||||||| | |||||||||||||| |||| |
|
|
| T |
48433977 |
tttattcttcaggtggctatgctcctcgtcggtcgtttttacatttgatttggctatgttgcatttgggttatatggaatgaaagaaatcaaa |
48433885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 6333072 - 6333127
Alignment:
| Q |
266 |
ttacttgagaaggttaaaattacatctttcaaatggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||| |||| |||| | ||||||||||||| ||||||| |||| |
|
|
| T |
6333072 |
ttacttgagaaggttaagattatatctcttaaatggttgaaagaaaaaaatgtgtg |
6333127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 13404047 - 13403726
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| || ||||||||||| |
|
|
| T |
13404047 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggtgatctctggcaacaaattaaaacttggattggcgtgttttttgt |
13403948 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13403947 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtggttatgctcaaagaaggtcttttcttcatttgatttgactttgtggt |
13403848 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||| |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
13403847 |
atttgggttctttggaatgaaagaaataaaagactgtttgtcaacacagctaaaacaacatagcaacttcttgagaaggttaagattacatctctcaaat |
13403748 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
13403747 |
ggttgaaagcaaaaaatgtgtg |
13403726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 3 - 321
Target Start/End: Original strand, 41691937 - 41692256
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
||||| ||||||||||| |||| ||||||||||||||||||||||||||||| | ||| ||||| ||||||||| ||||||| |||||||||| || | |
|
|
| T |
41691937 |
tgtggtcaaaatgaaaccgtagatcacttaattattcattgtcctatttttggtgatctttggcaacaaattaaatcttggattggtgtgttttccgtag |
41692036 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtat |
202 |
Q |
| |
|
||||| ||||||| |||| ||||||||||| ||||||| ||||| ||| |||| |||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
41692037 |
atccttctcaggttctggatcattattatcaatttgttttctcttcgggtagctatggtccaagaaggtcgtttcttcatttggtttggctttgtggtat |
41692136 |
T |
|
| Q |
203 |
ttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatgg |
301 |
Q |
| |
|
||||||||||||| |||||||||| || | ||| ||| ||| |||||||||||||| |||||||||||||||||||| |||| |||| | |||||| |
|
|
| T |
41692137 |
ttgggttctttggcatgaaagaaatcagagactatttgtcaatacaacaaaaacaactacacaattacttgagaaggttaagattatatctcttaaatgg |
41692236 |
T |
|
| Q |
302 |
ttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
41692237 |
ttgaaagcaaaaaatgtgtg |
41692256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 12 - 321
Target Start/End: Complemental strand, 24733094 - 24732784
Alignment:
| Q |
12 |
aatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtggatcctcatc |
111 |
Q |
| |
|
||||||||| |||| || |||||||||||||||||||||||||| | ||| |||| ||||||||||||||||| |||||||||| ||||||||| ||| |
|
|
| T |
24733094 |
aatgaaacattagatcatttaattattcattgtcctatttttggtgatcttcggcaacaaattaaaacttggattggtgtgttttccgtggatccttatc |
24732995 |
T |
|
| Q |
112 |
aggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtatttgggttct |
211 |
Q |
| |
|
||||| |||| ||||||||||| ||||||| ||||| ||| ||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
24732994 |
aggttctggatcattattatcaatttgttttctcttctggtagcaatgcttcaagaaggtctttccttcatttggtttggctttgtggtatttgagttct |
24732895 |
T |
|
| Q |
212 |
ttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatggttgaaagca |
310 |
Q |
| |
|
|||| | ||||||| || | | | ||| ||| ||| |||||||||| |||||||||||||||||||| |||| |||| | ||||||||||||||| |
|
|
| T |
24732894 |
ttggcacaaaagaaatcagagaatatttgtcaatacagcaaaaacaactgcacaattacttgagaaggttaagattatatctcttaaatggttgaaagca |
24732795 |
T |
|
| Q |
311 |
aaaaatatgtg |
321 |
Q |
| |
|
|||||| |||| |
|
|
| T |
24732794 |
aaaaatgtgtg |
24732784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 47 - 159
Target Start/End: Complemental strand, 43599698 - 43599586
Alignment:
| Q |
47 |
tatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtggatcctcatcaggttttggaccattattatcagtttgtttattct |
146 |
Q |
| |
|
||||||| | ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43599698 |
tattttttgtgctctctggcaacaaattaaaacttggattggtgtgttttctgtggatcctcatcaggttttggaccattattatcagtttgtttattct |
43599599 |
T |
|
| Q |
147 |
tcaggtgattatg |
159 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
43599598 |
tcaggtggttatg |
43599586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 155 - 321
Target Start/End: Complemental strand, 43599300 - 43599133
Alignment:
| Q |
155 |
ttatgctccaagaaggtcttttcttcatttgatttggctttgtggtatttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaa |
253 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||| | | | ||||| ||||||| | ||| |
|
|
| T |
43599300 |
ttatgctccaagaaggtcttttcttcatttgattttgctttgtggtatttgggttctttgaaatgaaataaataatagattgtttgccaacacagctaaa |
43599201 |
T |
|
| Q |
254 |
acaacactgcaattacttgagaaggttaaaattacatctttcaaatggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
|||||| |||| | |||||||||||||| ||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
43599200 |
acaacagagcaacttcttgagaaggttaagattacatctctcaaatggttgaaagcaaaaaatgtgtg |
43599133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 30936834 - 30937155
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
30936834 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggtgctctctggcaacaaattaaaacttggatcggtgtattttttgt |
30936933 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30936934 |
ggatcctcatcaggttttggcccattatcatcagattgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
30937033 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| | | | ||||| ||||||| | ||||||||| |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
30937034 |
atttgggttctttggaatgaaagaaataatagattgtttgtcaacacagctaaaacaacatagcaacttcttgagaaggttaagattacatctctcaaat |
30937133 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
30937134 |
ggttgaaagcaaaaaatgtgtg |
30937155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 16896750 - 16897065
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
16896750 |
gttgtggacaaaatgaaacaatagaccacttaattattaattgtcctatttttggtgctctctggcaacaaattaaaacttggattggtgtgttttttgt |
16896849 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16896850 |
ggatcctcatcaggttttggaccattattatcagtttatttattcttcaggtggttatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
16896949 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttta-caacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
||||| |||||||||||||||||||| | | | |||||| || |||| | ||||||||| |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
16896950 |
atttgagttctttggaatgaaagaaataatagattgtttatcagcacagctaaaacaacagagcaacttcttgagaaggttaagattacatctctcaaat |
16897049 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaa |
315 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
16897050 |
ggttgaaagcaaaaaa |
16897065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 19233051 - 19232730
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||| | | |
|
|
| T |
19233051 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggtaatctctggcaacaaattaaaacttggattggcgtgttttctat |
19232952 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
19232951 |
ggatcctcatcatgttttggaccattattatcagtttgtttattcttcaagtggttatgctccaagaaggtcttttcttcatttgatttggcttggtggt |
19232852 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| ||| | ||||| ||||||| | ||||||||| |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
19232851 |
atttgggttctttggaatgaaagaaataaaagattgtttgtcaacacagctaaaacaacagagcaacttcttgagaaggttaagattacatctctcaaat |
19232752 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
19232751 |
ggttgaaagcaaaaaatgtgtg |
19232730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 321
Target Start/End: Complemental strand, 40970177 - 40969858
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
|||||| ||||||||||||| || || |||||||||||||||||||||||||| | | ||||| ||||||||||||||||| |||||||||| ||||| |
|
|
| T |
40970177 |
tgtggaaaaaatgaaacaattgatcatttaattattcattgtcctatttttggcgacttatggcaacaaattaaaacttggattggtgtgttttctgtgg |
40970078 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtat |
202 |
Q |
| |
|
| || || |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
40970077 |
acccccaacaggttttggaccattattatcagtttgtttattcttcaggttgttatactccaagaaggtcttttcttcaattgatttggctttgtggtat |
40969978 |
T |
|
| Q |
203 |
ttgggttctttggaatgaaagaaaccaaaaactgtttac-aacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatgg |
301 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||| |||||| ||| ||||||| |||||||||||||||||||||| ||||||||| |||| ||| |
|
|
| T |
40969977 |
ttgggttctttggaatgaaagaaatcaaagactgtttactaacacagcaagaacaacagtgcaattacttgagaaggttaagattacatctctcaagtgg |
40969878 |
T |
|
| Q |
302 |
ttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
40969877 |
ttgaaagcaaaaaatgtgtg |
40969858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 43 - 321
Target Start/End: Complemental strand, 31644853 - 31644574
Alignment:
| Q |
43 |
gtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtggatcctcatcaggttttggaccattattatcagtttgttta |
142 |
Q |
| |
|
||||||||||||| | ||||||||| ||||||||||||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
31644853 |
gtcctatttttggtgatctctggcaacaaattaaaacttggattggcgtgttttctgtggatcctcatcaagttttggaccattattatcagtttgttta |
31644754 |
T |
|
| Q |
143 |
ttcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtatttgggttctttggaatgaaagaaaccaaaaactgttt-ac |
241 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| | |
|
|
| T |
31644753 |
ttcttcaggtggttatgctccaagaaggtcttttcttcatttgatttggctttgtggtattcgggttctttggaatgaaagaaataaaagactgtttgtc |
31644654 |
T |
|
| Q |
242 |
aacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
|||||| | ||||||||| |||| | |||||||||||||| ||||||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
31644653 |
aacacagctaaaacaacatagcaacttcttgagaaggttaagattacatctctcaaatggttgaaagtaaaaaatgtgtg |
31644574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 18 - 321
Target Start/End: Original strand, 50542847 - 50543151
Alignment:
| Q |
18 |
acaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtggatcctcatcaggttt |
117 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||| | ||| || || ||||||||||||||||| | ||||||| |||||||||| |||| |||| |
|
|
| T |
50542847 |
acaatagaccacttaattatttgttgtcctgtttttggtgatctttgacaacaaattaaaacttggattgacgtgttttctgtggatcctaatcaagttt |
50542946 |
T |
|
| Q |
118 |
tggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtatttgggttctttggaa |
217 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| || |
|
|
| T |
50542947 |
tggaccattattatcagtttatttatttttcaggtggttatgctccaagaagatcttttcttcatttgatttggctttgtggtatttaggttctttgaaa |
50543046 |
T |
|
| Q |
218 |
tgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatggttgaaagcaaaaaat |
316 |
Q |
| |
|
||||||||| ||| | ||||| ||||||| | ||||||||| |||| | |||||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
50543047 |
tgaaagaaataaaagattgtttgtcaacacagctaaaacaacagagcaacttcttgagaaggttaagattacatctctcaaatggttgaaagcaaaaaat |
50543146 |
T |
|
| Q |
317 |
atgtg |
321 |
Q |
| |
|
||||| |
|
|
| T |
50543147 |
atgtg |
50543151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 3 - 321
Target Start/End: Complemental strand, 11584025 - 11583706
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
||||| ||||||||||||||||| ||||| || ||||||||||||||||| || | ||| |||||||||||||| |||||||| ||| |||||| ||||| |
|
|
| T |
11584025 |
tgtggccaaaatgaaacaatagatcacttgatcattcattgtcctattttgggtgatctttggcagcaaattaagacttggattggtctgttttctgtgg |
11583926 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtat |
202 |
Q |
| |
|
||||||| ||||||| || ||||||||||||||||||||||||||||||| |||| || |||||| ||| |||||| |||| || ||||||||||||| |
|
|
| T |
11583925 |
atcctcaacaggtttcagatcattattatcagtttgtttattcttcaggtggttatactgcaagaatgtcctttcttaattttataaggctttgtggtat |
11583826 |
T |
|
| Q |
203 |
ttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatgg |
301 |
Q |
| |
|
|||||||||||| |||||||||||||||| | ||||| ||||||| ||| ||||||| ||||||||||||||||||||| ||||||||| |||||| | |
|
|
| T |
11583825 |
ttgggttctttgaaatgaaagaaaccaaagattgtttgccaacacagcaagaacaacagagcaattacttgagaaggttaagattacatctctcaaattg |
11583726 |
T |
|
| Q |
302 |
ttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
11583725 |
ttgaaagcaaaaaatgtgtg |
11583706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 81 - 231
Target Start/End: Original strand, 19653012 - 19653162
Alignment:
| Q |
81 |
tggatcggtgtgttttttgtggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttc |
180 |
Q |
| |
|
||||| ||||| | ||| |||||||||||||||||| |||| |||| | || ||| ||||||||||||||| ||||||||| | | || ||||| | |
|
|
| T |
19653012 |
tggattggtgtttatttagtggatcctcatcaggttatggatcatttccaccaatttatttattcttcaggtggttatgctcctcgtcgatcgtttctac |
19653111 |
T |
|
| Q |
181 |
atttgatttggctttgtggtatttgggttctttggaatgaaagaaaccaaa |
231 |
Q |
| |
|
||||||||||| | ||| | ||||||||| ||||||||||||| ||||||| |
|
|
| T |
19653112 |
atttgatttggttatgttgcatttgggttatttggaatgaaaggaaccaaa |
19653162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 7922261 - 7922318
Alignment:
| Q |
176 |
tcttcatttgatttggctttgtggtatttgggttctttggaatgaaagaaaccaaaaa |
233 |
Q |
| |
|
|||||||||||||||||||| | | ||||||||| ||||||||||||||||||||||| |
|
|
| T |
7922261 |
tcttcatttgatttggctttattgcatttgggttatttggaatgaaagaaaccaaaaa |
7922318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 53050658 - 53050602
Alignment:
| Q |
265 |
attacttgagaaggttaaaattacatctttcaaatggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
|||||||||||| ||||| ||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
53050658 |
attacttgagaatgttaagattacatctctcaaatggttgaaagcaaaaaatgtgtg |
53050602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 1308842 - 1309163
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| ||| |
|
|
| T |
1308842 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggtgctctctggcaacaaattaaaacttggattggtgtgttttctgt |
1308941 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1308942 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcatcaggtggttatgctccaagaaggtattttcttcatttgatttggctttgtggt |
1309041 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| | | | | ||| ||||||||| ||||||||| |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
1309042 |
atttgggttctttggaatgaaagaaataatagattatttgtcaacacaactaaaacaacagagcaacttcttgagaaggttaagattacatctctcaaat |
1309141 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
1309142 |
ggttgaaagcaaaaaatgtgtg |
1309163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 26711198 - 26710877
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||||||||||||||| |||||||||| ||| |
|
|
| T |
26711198 |
gttgtggacaaaatgaaacaatagaccacttaattattcgttgtcctatttttggtgatctctggcaacaaattaaaacttggattggtgtgttttctgt |
26711099 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||| ||||||||| |
|
|
| T |
26711098 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtggttatgctccaagaatgtattttcttcatttgatttgcctttgtggt |
26710999 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
||||||||||||| |||||||||||| ||||| ||||| ||||||| | ||||||||| |||| | |||||||| ||||| ||||||||| |||||| |
|
|
| T |
26710998 |
atttgggttctttagaatgaaagaaataaaaaaatgtttgtcaacacagctaaaacaacagagcaacttcttgagaatgttaagattacatctctcaaat |
26710899 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
26710898 |
ggttgaaagcaaaaaatgtgtg |
26710877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 16467384 - 16467063
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||| || ||||||||||||||||| || ||||||| ||| |
|
|
| T |
16467384 |
gttgtggacaaaatgaaacaatagaccacttaattattcgttgtcctatttttggtgatctctgtcaacaaattaaaacttggattggcgtgttttctgt |
16467285 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
16467284 |
ggatcctcatcaggttttggaccattattatcaatttgtttattctttaggtggttatgctacaagaatgtcttttcttcatttgatttggctttgtggt |
16467185 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||| ||||||| | ||||||| | |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
16467184 |
atttgggttctttggaatgaaagaaataaaagactgtttgtcaacacagctaaaacaaaagagcaacttcttgagaaggttaagattacatctctcaaat |
16467085 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
|||||||| |||||||| |||| |
|
|
| T |
16467084 |
ggttgaaaacaaaaaatgtgtg |
16467063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 33146644 - 33146960
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||| ||| |
|
|
| T |
33146644 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggtaatctctggcaacaaattaaaacttggattgacatgttttatgt |
33146743 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
||| |||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
33146744 |
gga-cctcattaggttttggaccattattatcagtttgtttattcttcaagtggttatgctccaagaaggtattttcttcatttgatttggttttgtggt |
33146842 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttta-caacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||||||| ||||||| | ||||||||| ||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
33146843 |
atttgggttctttggaatgaaagaaataaaagactgtttatcaacacagctaaaacaacagatcaacttcttgagaaggttaagattacatctctcaaat |
33146942 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaata |
317 |
Q |
| |
|
|||||||| ||||||||| |
|
|
| T |
33146943 |
ggttgaaatcaaaaaata |
33146960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 231
Target Start/End: Original strand, 5874786 - 5875014
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
|||||| ||||||||||||| || |||||||||||||||||||||||||||| | | ||||| ||||||||||||||||| |||||||| ||||| |
|
|
| T |
5874786 |
tgtggaaaaaatgaaacaattgatcacttaattattcattgtcctatttttgacgacttatggcaacaaattaaaacttggatttttgtgttttctgtgg |
5874885 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtat |
202 |
Q |
| |
|
| | || |||||||| |||||||||||||||||||||| |||||||| || |||| || ||||||||| ||||||| | |||||||||||||||||||| |
|
|
| T |
5874886 |
acctccaacaggtttttgaccattattatcagtttgttttttcttcagttggttatacttcaagaaggttttttctttaattgatttggctttgtggtat |
5874985 |
T |
|
| Q |
203 |
ttgggttctttggaatgaaagaaaccaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||| |||| |
|
|
| T |
5874986 |
ttgggttctttggaatgaaagaaatcaaa |
5875014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 3490033 - 3490336
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||| |||||||||||| |||| || |||||||| ||||||||||||||||| | ||| ||||| ||||||||||||||||| ||||||||| || |
|
|
| T |
3490033 |
gttgtggccaaaatgaaacattagatcatttaattatccattgtcctatttttggtgatctttggcaacaaattaaaacttggatttgtgtgttttccgt |
3490132 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
|||| ||||||||||| ||||||| ||||| ||| ||||| ||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
3490133 |
ggat------------------cattattatcaatttgttttctcttctggtagcaatgcttcaagaaggtctttccttcatttggtttggctttgtggt |
3490214 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
||||||||||||||| | |||||||| || | | | ||| ||| ||| |||||||||| |||||||||||||||||||| |||| |||| | |||| |
|
|
| T |
3490215 |
atttgggttctttggcaagaaagaaatcagagaatatttgtcaatacagcaaaaacaactgcacaattacttgagaaggttaagattatatctcttaaat |
3490314 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
3490315 |
ggttgaaagcaaaaaatgtgtg |
3490336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 111 - 321
Target Start/End: Complemental strand, 31934105 - 31933894
Alignment:
| Q |
111 |
caggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtatttgggttc |
210 |
Q |
| |
|
|||||| |||| ||||||||||| ||||||| ||||| ||| ||||| ||||||| ||||| ||||||||| ||||||||||||||||||| ||| |
|
|
| T |
31934105 |
caggttctggatcattattatcaatttgttttctcttctggtagcaatgcttcaagaagctctttccttcatttggtttggctttgtggtatttgagttt |
31934006 |
T |
|
| Q |
211 |
tttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatggttgaaagc |
309 |
Q |
| |
|
||||| | |||||||| || | | | ||| ||| ||| |||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||| |
|
|
| T |
31934005 |
tttggcacgaaagaaatcagagaatatttgtcaatacagcaaaaacaactgcacaattacttgagaaggttaagattatatctcttaaatggttgaaagc |
31933906 |
T |
|
| Q |
310 |
aaaaaatatgtg |
321 |
Q |
| |
|
||||||| |||| |
|
|
| T |
31933905 |
aaaaaatgtgtg |
31933894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 23651624 - 23651404
Alignment:
| Q |
9 |
caaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtggatcctc |
108 |
Q |
| |
|
||||||||||||||||| || |||| |||||||||||||||||||| ||||||||| | ||||| ||| | ||||||| |||||||||||| | |
|
|
| T |
23651624 |
caaaatgaaacaatagatcatctaataattcattgtcctatttttggcaatctctggcaacttattaagttttgtcttggtgtgtattttgtggatcccc |
23651525 |
T |
|
| Q |
109 |
atcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtatttgggt |
208 |
Q |
| |
|
| || ||| || |||| |||||| ||||| | |||||||||| ||| |||| || |||| || | |||||||||||||||||| ||||||||| |
|
|
| T |
23651524 |
aacaagttacagatcatttttatcaagttgttcactcttcaggtggttacgctctgcgacggtcattcttacatttgatttggctttgttatatttgggt |
23651425 |
T |
|
| Q |
209 |
tctttggaatgaaagaaacca |
229 |
Q |
| |
|
||| || |||||||| ||||| |
|
|
| T |
23651424 |
tctctgaaatgaaaggaacca |
23651404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 231
Target Start/End: Original strand, 33754444 - 33754576
Alignment:
| Q |
99 |
gtggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtg |
198 |
Q |
| |
|
||||||||||||||||||||||| |||| | || ||| ||| ||||| ||||| ||||||||| | | || ||||| |||||||||||| | ||| |
|
|
| T |
33754444 |
gtggatcctcatcaggttttggatcatttccaccaatttattttttctttaggtggttatgctcctcgtcgatcgtttctacatttgatttggttatgtt |
33754543 |
T |
|
| Q |
199 |
gtatttgggttctttggaatgaaagaaaccaaa |
231 |
Q |
| |
|
| ||||||||| | ||||||||||| ||||||| |
|
|
| T |
33754544 |
gcatttgggttatatggaatgaaaggaaccaaa |
33754576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 17713940 - 17714000
Alignment:
| Q |
171 |
tcttttcttcatttgatttggctttgtggtatttgggttctttggaatgaaagaaaccaaa |
231 |
Q |
| |
|
|||||| | |||||||||||||| ||| | ||||||||| |||||||||||||||| |||| |
|
|
| T |
17713940 |
tcttttttacatttgatttggctctgttgcatttgggttatttggaatgaaagaaatcaaa |
17714000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 53679288 - 53679604
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||||||||| || ||||||| ||| |
|
|
| T |
53679288 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggtgatctttggcaacaaattaaaacttggattggcgtgttttatgt |
53679387 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53679388 |
ggatcctcatcagattttggaccattattatcagtttgtttattcttcaggtggttatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
53679487 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| ||| | ||||| ||||||||| ||||||||| |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
53679488 |
atttgggttctttggaatgaaagaaataaaagattgtttgtcaacacaactaaaacaacagagcaacttcttgagaaggttaagattacatctctcaaat |
53679587 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaat |
316 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
53679588 |
ggttgaaagcaaaaaat |
53679604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 38948052 - 38948373
Alignment:
| Q |
1 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||||| ||| |
|
|
| T |
38948052 |
gttgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggtgatctctggcaacaaattaaaacttggattggtgtgttttctgt |
38948151 |
T |
|
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38948152 |
ggatcctcatcaggttttggaccattattattagtttgtttattcttcaggtggttatgctccaagaaggttttttcttcatttgatttggctttgtggt |
38948251 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaat |
299 |
Q |
| |
|
|||||||||||||||||||||||||| | | | ||||| ||||||| | ||||||||| |||| | |||||||||||||| ||||||||| |||||| |
|
|
| T |
38948252 |
atttgggttctttggaatgaaagaaataatagattgtttgtcaacacagctaaaacaacatagcaacttcttgagaaggttaagattacatctctcaaat |
38948351 |
T |
|
| Q |
300 |
ggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
38948352 |
tgttgaaagcaaaaaatgtgtg |
38948373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 3 - 321
Target Start/End: Complemental strand, 19837098 - 19836779
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
|||||| ||||||||||||| || || |||||||||||||||| ||||||||| | | ||||| | ||||||||||||||| |||||||||| ||||| |
|
|
| T |
19837098 |
tgtggaaaaaatgaaacaattgatcatttaattattcattgtcttatttttggcgacttatggcaacgaattaaaacttggattggtgtgttttctgtgg |
19836999 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtat |
202 |
Q |
| |
|
| || || |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19836998 |
acccccaacaggttttggaccattattatcagtttgtttattcttcaggttgttataatccaagaaggtcttttcttcaattgatttggctttgtggtat |
19836899 |
T |
|
| Q |
203 |
ttgggttctttggaatgaaagaaaccaaaaactgtttac-aacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatgg |
301 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||||| |||||| ||| ||||||| |||||||||||||||| ||||| ||||||||| |||| ||| |
|
|
| T |
19836898 |
ttgggttctttcgaatgaaagaaaccaaagactgtttactaacacagcaagaacaacagtgcaattacttgagaatgttaagattacatctctcaagtgg |
19836799 |
T |
|
| Q |
302 |
ttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
19836798 |
ttgaaagcaaaaaatgtgtg |
19836779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 321
Target Start/End: Original strand, 43469997 - 43470301
Alignment:
| Q |
18 |
acaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtggatcctcatcaggttt |
117 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||| | ||| ||||| |||||||||||||| || |||||||||| ||||||||||||||||| | |
|
|
| T |
43469997 |
acaatagaccacataattattcattatcctatttttggtgatctttggcaacaaattaaaacttgaattggtgtgttttccgtggatcctcatcaggtgt |
43470096 |
T |
|
| Q |
118 |
tggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtatttgggttctttggaa |
217 |
Q |
| |
|
|||| ||||||||||| ||||||| ||||||| | |||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
43470097 |
tggatcattattatcaatttgttttctcttcagctagccatgctccaagaaagtctttccttcatttggtttggctttgtggtatttgggttctttggaa |
43470196 |
T |
|
| Q |
218 |
tgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatggttgaaagcaaaaaat |
316 |
Q |
| |
|
|||||||| |||| | | ||| ||| ||| ||||||||| |||||||||||||| |||| ||||| ||| | ||||||||||||||||||||| |
|
|
| T |
43470197 |
cgaaagaaatcaaagattatttgtcaatacagcaaaaacaattgcacaattacttgagaaagttatgattacttctcttaaatggttgaaagcaaaaaat |
43470296 |
T |
|
| Q |
317 |
atgtg |
321 |
Q |
| |
|
|||| |
|
|
| T |
43470297 |
gtgtg |
43470301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 321
Target Start/End: Original strand, 8932907 - 8933226
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
||||| ||||||||||||||||| || |||| || || | |||||||||||| ||| ||||| |||||||| |||||||| |||||||||| | ||| |
|
|
| T |
8932907 |
tgtggccaaaatgaaacaatagatcatataataatccactatcctatttttggcaatctttggcaacaaattaagacttggattggtgtgttttatttgg |
8933006 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtat |
202 |
Q |
| |
|
||||||| |||||| ||| ||||||||||| |||||| | |||||| ||| ||| |||||| || ||||||| || ||||||||||||||||||||||| |
|
|
| T |
8933007 |
atcctcaacaggttacggatcattattatcaatttgttcactcttcatgtggttacgctccacgacggtctttcctacatttgatttggctttgtggtat |
8933106 |
T |
|
| Q |
203 |
ttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatgg |
301 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||| ||| ||||||||| |||||| || |||| | ||||||||| ||| |||||||| || |||| |
|
|
| T |
8933107 |
ttgggttctctggaatgaaagaaaccaaagactttttgccaacacaactaaaacagcagcgcaactccttgagaagactaagattacatccctccgatgg |
8933206 |
T |
|
| Q |
302 |
ttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
8933207 |
ctaaaagcaaaaaatatgtg |
8933226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 321
Target Start/End: Original strand, 19309764 - 19310083
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
||||| ||||||||||| |||| || |||||||||||||||||||||||||| | ||| ||||| ||||||||||||||||| ||||| |||| |||| |
|
|
| T |
19309764 |
tgtggccaaaatgaaactttagatcatttaattattcattgtcctatttttggtggtctttggcaacaaattaaaacttggattggtgtattttccgtgg |
19309863 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtat |
202 |
Q |
| |
|
|||| |||||||| |||| ||||||||||| ||||||| |||| ||| ||||| ||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
19309864 |
atccctatcaggttctggatcattattatcaatttgttttctcttttggtagcaatgcttcaagaaggtctttccttcatttggtttggctttgtggtat |
19309963 |
T |
|
| Q |
203 |
ttgggttctttggaatgaaagaaaccaaaaactgttt-acaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatgg |
301 |
Q |
| |
|
||||||||||||| | |||||||| || | | | ||| ||| ||| |||||||||| |||||||||||||||||||| || | |||| | ||||| |
|
|
| T |
19309964 |
ttgggttctttggcacgaaagaaatcagagattatttgtcaatacagcaaaaacaactgcacaattacttgagaaggttaagatcatatctcttcaatgg |
19310063 |
T |
|
| Q |
302 |
ttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
19310064 |
ttgaaagcaaaaaatgtgtg |
19310083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 231
Target Start/End: Original strand, 10009444 - 10009594
Alignment:
| Q |
81 |
tggatcggtgtgttttttgtggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttc |
180 |
Q |
| |
|
||||| ||||| | ||| ||||||||||| |||||| ||| |||| |||| ||| ||||||||||||||| ||||||||| | | |||||||| | |
|
|
| T |
10009444 |
tggattggtgtttatttagtggatcctcaacaggttacggatcatttccatcaatttatttattcttcaggtggttatgctcctcgtcgatcttttctac |
10009543 |
T |
|
| Q |
181 |
atttgatttggctttgtggtatttgggttctttggaatgaaagaaaccaaa |
231 |
Q |
| |
|
||||||||||||| ||| | ||||||||| |||||||||||||||| |||| |
|
|
| T |
10009544 |
atttgatttggctatgttgcatttgggttatttggaatgaaagaaatcaaa |
10009594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 32045347 - 32045448
Alignment:
| Q |
130 |
atcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtatttgggttctttggaatgaaagaaacca |
229 |
Q |
| |
|
|||| |||||| |||||||||||| ||||||||| | || |||| | |||||||||||||||||| | ||||||||| ||||||||||||||||||| |
|
|
| T |
32045347 |
atcaatttgttcattcttcaggtggttatgctcctcgtcgggtttttttacatttgatttggctttgttgcatttgggttatttggaatgaaagaaacca |
32045446 |
T |
|
| Q |
230 |
aa |
231 |
Q |
| |
|
|| |
|
|
| T |
32045447 |
aa |
32045448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 214
Target Start/End: Original strand, 25459302 - 25459412
Alignment:
| Q |
104 |
tcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtatt |
203 |
Q |
| |
|
|||||| | |||| |||| |||| ||| ||||||||| | |||||||||| |||||||| | |||| |||||||||||| ||||||||||| ||||| |
|
|
| T |
25459302 |
tcctcaacgggttatggatcatttttaccagtttgttcactcttcaggtgcctatgctccccgtcggtcatttcttcatttggtttggctttgttgtatt |
25459401 |
T |
|
| Q |
204 |
tgggttctttg |
214 |
Q |
| |
|
||||||||||| |
|
|
| T |
25459402 |
tgggttctttg |
25459412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 14528545 - 14528488
Alignment:
| Q |
169 |
ggtcttttcttcatttgatttggctttgtggtatttgggttctttggaatgaaagaaa |
226 |
Q |
| |
|
|||||||| | |||||||||||||||||| ||| ||||||||||||||| |||||||| |
|
|
| T |
14528545 |
ggtcttttatacatttgatttggctttgttgtaattgggttctttggaacgaaagaaa |
14528488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 21479616 - 21479513
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
||||| |||| |||| ||| ||| || |||||||||||||||||||||||||| |||| ||||| || | |||| |||| | ||||||| |||||||| |
|
|
| T |
21479616 |
tgtggtcaaattgaatcaacagatcatttaattattcattgtcctatttttggttctctttggcaacacgtgaaaaattggcttggtgtgtattttgtgg |
21479517 |
T |
|
| Q |
103 |
atcc |
106 |
Q |
| |
|
|||| |
|
|
| T |
21479516 |
atcc |
21479513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 5592220 - 5592261
Alignment:
| Q |
180 |
catttgatttggctttgtggtatttgggttctttggaatgaa |
221 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
5592220 |
catttgatttggctatgttgtatttgggttctttggaatgaa |
5592261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 48126150 - 48126109
Alignment:
| Q |
180 |
catttgatttggctttgtggtatttgggttctttggaatgaa |
221 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
48126150 |
catttgatttggctatgttgtatttgggttctttggaatgaa |
48126109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 7446628 - 7446496
Alignment:
| Q |
99 |
gtggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtg |
198 |
Q |
| |
|
|||||||||||||||||| ||| |||| |||| ||| |||| |||| ||||| |||||||| ||||||| | |||||||||||||| ||| |
|
|
| T |
7446628 |
gtggatcctcatcaggttacggatcatttcaatcaatttatttactcttgaggtggctatgctcctcatcggtctttcttacatttgatttggctctgtt |
7446529 |
T |
|
| Q |
199 |
gtatttgggttctttggaatgaaagaaaccaaa |
231 |
Q |
| |
|
| ||||||||| |||||||||||||||| |||| |
|
|
| T |
7446528 |
gcatttgggttatttggaatgaaagaaatcaaa |
7446496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 14545153 - 14545184
Alignment:
| Q |
36 |
attcattgtcctatttttggagctctctggca |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
14545153 |
attcattgtcctatttttggagctctctggca |
14545184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 3 - 321
Target Start/End: Complemental strand, 841946 - 841628
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||||| ||||||| | || |||| |||||||| |||||||| | |||||||| | ||| |
|
|
| T |
841946 |
tgtggccaaaatgaaacaatagatcacttaattattcattgtcgtattttttatgacctttggcgacaaattaagacttggattgttgtgttttatttgg |
841847 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtat |
202 |
Q |
| |
|
| |||| |||||||||| |||||||||| ||||||||| |||||||||| ||||| ||| | ||||||||| || ||||||||||||||||||||||| |
|
|
| T |
841846 |
actctcaataggttttggatcattattatcggtttgtttactcttcaggtggttatgatccgataaggtctttcctacatttgatttggctttgtggtat |
841747 |
T |
|
| Q |
203 |
ttgggttctttggaatgaaagaaaccaaaaactgtttacaacacaacaaaaacaacactgcaattacttgagaaggttaaaattacatctttcaaatggt |
302 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
841746 |
ttgggttctttcgaatgaaagaaaccaaagactgtttacaacacaacaaaaacaacattgcaattacttgagaaggttaaaattacatctctcaaatggt |
841647 |
T |
|
| Q |
303 |
tgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
841646 |
tgaaagcaaaaaatatgtg |
841628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 2681529 - 2681398
Alignment:
| Q |
162 |
ccaagaaggtcttttcttcatttgatttggctttgtggtatttgggttctttggaatgaaagaaaccaaaaactgtttac-aacacaacaaaaacaacac |
260 |
Q |
| |
|
||||||||||| ||||||||||||| |||||| | |||||||| |||||||||||||||||||||||||| ||| ||| | |||||||||| |||||| |
|
|
| T |
2681529 |
ccaagaaggtcctttcttcatttgaattggctatatggtatttaggttctttggaatgaaagaaaccaaagactttttgcaaacacaacaagaacaacta |
2681430 |
T |
|
| Q |
261 |
tgcaattacttgagaaggttaaaattacatct |
292 |
Q |
| |
|
|||| ||||||||||| |||| ||||||||| |
|
|
| T |
2681429 |
agcaactacttgagaagattaagattacatct |
2681398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 2681704 - 2681578
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcctatttttggagctctctggcagcaaattaaaacttggatcggtgtgttttttgtgg |
102 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| || | ||||||||||||||| | || ||||| |||||||| | |||||| ||| |||||| ||||| |
|
|
| T |
2681704 |
tgtggacaaaatgaaacagtagatcacttaatcataccttgtcctatttttggtgacctatggcaacaaattaagatttggattggtttgttttctgtgg |
2681605 |
T |
|
| Q |
103 |
atcctcatcaggttttggaccattatt |
129 |
Q |
| |
|
| ||||| ||||||||||||||||||| |
|
|
| T |
2681604 |
accctcaacaggttttggaccattatt |
2681578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 26501667 - 26501566
Alignment:
| Q |
130 |
atcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggtatttgggttctttggaatgaaagaaacca |
229 |
Q |
| |
|
|||| ||| ||||||||||||||| |||||||||| | | |||||||| |||||||||||||| ||| | ||||||||| |||||||||||||||| || |
|
|
| T |
26501667 |
atcaatttatttattcttcaggtggttatgctccacgtcgatcttttctacatttgatttggctatgttgcatttgggttatttggaatgaaagaaatca |
26501568 |
T |
|
| Q |
230 |
aa |
231 |
Q |
| |
|
|| |
|
|
| T |
26501567 |
aa |
26501566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 10469093 - 10468969
Alignment:
| Q |
99 |
gtggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtg |
198 |
Q |
| |
|
|||||||||||||||||| ||| |||| |||| ||| |||| |||||||||| ||||||||| | | |||||||| |||||||||||||| ||| |
|
|
| T |
10469093 |
gtggatcctcatcaggttacggatcatttccatcaatttatttactcttcaggtggttatgctcctcgtcgatcttttctacatttgatttggctatgtt |
10468994 |
T |
|
| Q |
199 |
gtatttgggttctttggaatgaaag |
223 |
Q |
| |
|
| ||||||||| |||| |||||||| |
|
|
| T |
10468993 |
gcatttgggttatttgaaatgaaag |
10468969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 13641010 - 13641069
Alignment:
| Q |
180 |
catttgatttggctttgtggtatttgggttctttggaatgaaagaaaccaaaaactgttt |
239 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||||||||| ||||| | ||||||| |
|
|
| T |
13641010 |
catttgatttggctttgttgtatttgggttctctggaatgaaaggaaccatagactgttt |
13641069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 38436847 - 38436798
Alignment:
| Q |
180 |
catttgatttggctttgtggtatttgggttctttggaatgaaagaaacca |
229 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||||||||| ||||| |
|
|
| T |
38436847 |
catttgatttggctttgttgcatttgggttctttggaatgaaaggaacca |
38436798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 231
Target Start/End: Original strand, 28639031 - 28639161
Alignment:
| Q |
101 |
ggatcctcatcaggttttggaccattattatcagtttgtttattcttcaggtgattatgctccaagaaggtcttttcttcatttgatttggctttgtggt |
200 |
Q |
| |
|
|||||||| ||||||| ||| |||| |||| ||| |||| |||||||||| |||||||| | |||| ||||| |||||||||||||| ||| | |
|
|
| T |
28639031 |
ggatcctcctcaggttacggatcatttccatcaatttatttactcttcaggtggctatgctcctcgtcggtcgtttctacatttgatttggctatgttgc |
28639130 |
T |
|
| Q |
201 |
atttgggttctttggaatgaaagaaaccaaa |
231 |
Q |
| |
|
||||||||| | |||||||||||||| |||| |
|
|
| T |
28639131 |
atttgggttatctggaatgaaagaaatcaaa |
28639161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 16422034 - 16422083
Alignment:
| Q |
180 |
catttgatttggctttgtggtatttgggttctttggaatgaaagaaacca |
229 |
Q |
| |
|
|||||||||||||||| | |||||||||| |||||||||||||| ||||| |
|
|
| T |
16422034 |
catttgatttggctttcttgtatttgggtcctttggaatgaaaggaacca |
16422083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 3417663 - 3417611
Alignment:
| Q |
269 |
cttgagaaggttaaaattacatctttcaaatggttgaaagcaaaaaatatgtg |
321 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||||||||| ||||| |||| |
|
|
| T |
3417663 |
cttgagaaggttaagattacatctctcaaatgattgaaagcacaaaatgtgtg |
3417611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 13640829 - 13640873
Alignment:
| Q |
3 |
tgtggacaaaatgaaacaatagaccacttaattattcattgtcct |
47 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13640829 |
tgtggtcaaaatgaaacaatagaccatctaattattcattgtcct |
13640873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 20974090 - 20974135
Alignment:
| Q |
184 |
tgatttggctttgtggtatttgggttctttggaatgaaagaaacca |
229 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||| ||||| |
|
|
| T |
20974090 |
tgatttggctttgttgtatttgggttatgtggaatgaaaggaacca |
20974135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0175 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0175
Description:
Target: scaffold0175; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 19588 - 19640
Alignment:
| Q |
177 |
cttcatttgatttggctttgtggtatttgggttctttggaatgaaagaaacca |
229 |
Q |
| |
|
|||||| |||||||||||||| |||||||||| |||||||||||| ||||||| |
|
|
| T |
19588 |
cttcatatgatttggctttgttgtatttgggtcctttggaatgaacgaaacca |
19640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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