View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8893_low_66 (Length: 255)
Name: NF8893_low_66
Description: NF8893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8893_low_66 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 26449636 - 26449382
Alignment:
| Q |
1 |
ctcagaatttacatcatcttctgcaatctaatgtggatacctacatcaaagattcaaattggaatgttcctcaagcttctttgcctgcatatcctgcttt |
100 |
Q |
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| T |
26449636 |
ctcagaatttacatcatcttctgcaatctaatgtggatacctacatcaaagattcaaattggaatgttcctcaagcttttttggttgcatattctgcttt |
26449537 |
T |
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| Q |
101 |
gcagcagaaactattgttgactactatacctattttccctaaagaagataaactaatatagaaagcctctcatgatggaaatctagcttttaaagacgca |
200 |
Q |
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| T |
26449536 |
ggagcaaaaactattgatgactactatacctattgtccctaaagaagataaactaatatggaaagcctctcatgatggaaatttagcttttaaagacgca |
26449437 |
T |
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| Q |
201 |
tatctcttcctgacttccaatcagcctcagaacatcagttgggccaaagtcattt |
255 |
Q |
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| T |
26449436 |
tatctcttcctgacttccaatcagcctcagaacatcagttgggccaaagtcattt |
26449382 |
T |
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