View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8895_low_11 (Length: 375)

Name: NF8895_low_11
Description: NF8895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8895_low_11
NF8895_low_11
[»] chr5 (32 HSPs)
chr5 (118-375)||(12549969-12550226)
chr5 (20-110)||(28290097-28290187)
chr5 (20-110)||(15029762-15029852)
chr5 (20-110)||(18149736-18149826)
chr5 (20-110)||(19291359-19291449)
chr5 (21-110)||(8419074-8419163)
chr5 (33-110)||(14340401-14340478)
chr5 (23-110)||(21370689-21370776)
chr5 (21-110)||(15115546-15115635)
chr5 (20-110)||(4967224-4967314)
chr5 (20-110)||(38901093-38901183)
chr5 (20-110)||(4966819-4966909)
chr5 (20-109)||(38900648-38900737)
chr5 (21-110)||(39083362-39083450)
chr5 (23-110)||(22651767-22651854)
chr5 (20-110)||(28289687-28289777)
chr5 (20-110)||(32697679-32697769)
chr5 (21-110)||(14340864-14340953)
chr5 (23-88)||(32305843-32305908)
chr5 (31-110)||(10721789-10721868)
chr5 (23-110)||(20266371-20266458)
chr5 (20-86)||(5161609-5161675)
chr5 (20-110)||(16752585-16752675)
chr5 (20-110)||(21371149-21371239)
chr5 (23-110)||(17260676-17260763)
chr5 (20-110)||(18150177-18150267)
chr5 (20-110)||(27307513-27307603)
chr5 (118-154)||(12549931-12549967)
chr5 (63-110)||(41834555-41834602)
chr5 (20-110)||(5162022-5162112)
chr5 (62-110)||(16753065-16753113)
chr5 (38-110)||(28494847-28494919)
[»] chr3 (61 HSPs)
chr3 (20-110)||(44676925-44677015)
chr3 (20-110)||(43678298-43678388)
chr3 (20-110)||(49720814-49720904)
chr3 (20-110)||(49951549-49951639)
chr3 (20-110)||(2051298-2051388)
chr3 (20-110)||(16701245-16701335)
chr3 (20-110)||(38535312-38535402)
chr3 (20-110)||(41998232-41998322)
chr3 (20-110)||(51473309-51473399)
chr3 (20-110)||(47431699-47431789)
chr3 (20-110)||(50662865-50662955)
chr3 (20-110)||(51828411-51828501)
chr3 (20-110)||(14654202-14654292)
chr3 (20-110)||(46013876-46013966)
chr3 (20-110)||(51828993-51829083)
chr3 (20-109)||(329850-329939)
chr3 (20-109)||(55389609-55389698)
chr3 (20-107)||(34104644-34104731)
chr3 (20-110)||(32730842-32730932)
chr3 (20-110)||(330289-330379)
chr3 (20-110)||(22370599-22370689)
chr3 (20-110)||(40838655-40838745)
chr3 (20-110)||(40839105-40839195)
chr3 (20-110)||(51827960-51828050)
chr3 (20-110)||(52236819-52236909)
chr3 (20-110)||(52237270-52237360)
chr3 (20-110)||(52375784-52375874)
chr3 (22-110)||(33412609-33412697)
chr3 (23-110)||(14654645-14654732)
chr3 (23-110)||(36701109-36701196)
chr3 (20-110)||(16689361-16689451)
chr3 (20-110)||(30513725-30513814)
chr3 (20-110)||(40275096-40275186)
chr3 (20-110)||(43222393-43222483)
chr3 (20-110)||(43678737-43678827)
chr3 (20-110)||(46013425-46013515)
chr3 (20-110)||(52375330-52375420)
chr3 (23-110)||(36701552-36701639)
chr3 (20-110)||(2044274-2044364)
chr3 (20-110)||(40275547-40275636)
chr3 (24-110)||(49952003-49952089)
chr3 (20-110)||(51828542-51828632)
chr3 (20-110)||(55390050-55390140)
chr3 (28-100)||(39010482-39010554)
chr3 (22-110)||(49720374-49720462)
chr3 (32-110)||(25534893-25534971)
chr3 (20-110)||(32730392-32730482)
chr3 (32-110)||(41998693-41998771)
chr3 (20-110)||(44676475-44676565)
chr3 (20-107)||(34105103-34105190)
chr3 (20-110)||(27199705-27199795)
chr3 (20-110)||(39010078-39010168)
chr3 (20-110)||(43222843-43222933)
chr3 (20-110)||(49407799-49407889)
chr3 (38-110)||(49408252-49408324)
chr3 (31-110)||(27200155-27200234)
chr3 (31-110)||(37076138-37076217)
chr3 (20-110)||(38535748-38535838)
chr3 (33-110)||(8873694-8873770)
chr3 (31-110)||(50900535-50900614)
chr3 (20-110)||(37075689-37075779)
[»] chr1 (50 HSPs)
chr1 (20-110)||(37505070-37505160)
chr1 (20-110)||(30787251-30787341)
chr1 (20-110)||(34555835-34555925)
chr1 (20-110)||(10279000-10279090)
chr1 (20-110)||(21938566-21938656)
chr1 (20-110)||(29439375-29439465)
chr1 (20-110)||(44582512-44582602)
chr1 (21-110)||(50305239-50305328)
chr1 (20-110)||(9992157-9992248)
chr1 (20-110)||(37421397-37421488)
chr1 (23-110)||(17641825-17641912)
chr1 (20-110)||(1837508-1837598)
chr1 (20-110)||(9992608-9992698)
chr1 (20-110)||(50304442-50304532)
chr1 (20-110)||(16299135-16299224)
chr1 (20-110)||(45048158-45048248)
chr1 (20-111)||(44954228-44954319)
chr1 (20-110)||(2867914-2868004)
chr1 (20-110)||(8230094-8230184)
chr1 (20-110)||(10278551-10278641)
chr1 (20-110)||(16298685-16298775)
chr1 (24-110)||(29438933-29439019)
chr1 (20-110)||(44954679-44954769)
chr1 (20-110)||(30786774-30786865)
chr1 (20-110)||(2868161-2868251)
chr1 (20-110)||(8229640-8229730)
chr1 (20-110)||(34555382-34555472)
chr1 (20-110)||(37421163-37421253)
chr1 (20-110)||(39485068-39485158)
chr1 (21-110)||(6224700-6224789)
chr1 (21-110)||(52335964-52336053)
chr1 (20-108)||(4080026-4080114)
chr1 (23-110)||(44291304-44291391)
chr1 (23-110)||(50926233-50926320)
chr1 (20-110)||(44582060-44582150)
chr1 (21-110)||(17088593-17088682)
chr1 (21-110)||(23340186-23340275)
chr1 (22-81)||(17641397-17641456)
chr1 (23-110)||(23526986-23527073)
chr1 (20-110)||(444004-444094)
chr1 (20-110)||(37505520-37505610)
chr1 (23-106)||(23526665-23526748)
chr1 (27-110)||(29021325-29021408)
chr1 (23-110)||(44802627-44802714)
chr1 (31-110)||(45048599-45048678)
chr1 (23-110)||(50926697-50926784)
chr1 (24-109)||(25274760-25274845)
chr1 (27-87)||(29020906-29020966)
chr1 (30-110)||(50419393-50419473)
chr1 (31-110)||(17088149-17088228)
[»] chr8 (34 HSPs)
chr8 (20-108)||(18049595-18049683)
chr8 (20-110)||(18428215-18428305)
chr8 (20-111)||(9797180-9797271)
chr8 (20-110)||(599951-600041)
chr8 (20-110)||(15256284-15256374)
chr8 (20-110)||(28254428-28254518)
chr8 (20-110)||(41260274-41260364)
chr8 (20-110)||(5730820-5730910)
chr8 (20-110)||(16578549-16578639)
chr8 (21-110)||(2208717-2208806)
chr8 (20-110)||(7910619-7910709)
chr8 (20-110)||(34799082-34799172)
chr8 (21-110)||(42035775-42035864)
chr8 (21-110)||(35694332-35694421)
chr8 (20-110)||(15255856-15255946)
chr8 (20-110)||(18050044-18050134)
chr8 (21-110)||(7911070-7911159)
chr8 (21-110)||(28254880-28254969)
chr8 (21-110)||(35427266-35427355)
chr8 (20-110)||(41260714-41260804)
chr8 (20-110)||(599535-599625)
chr8 (20-110)||(9796729-9796819)
chr8 (32-110)||(28877354-28877432)
chr8 (20-110)||(5731265-5731355)
chr8 (20-110)||(6115564-6115654)
chr8 (20-110)||(16578111-16578201)
chr8 (20-110)||(34799536-34799626)
chr8 (21-110)||(35693871-35693960)
chr8 (23-106)||(28876910-28876993)
chr8 (63-110)||(35426845-35426892)
chr8 (20-110)||(18674151-18674241)
chr8 (20-88)||(42036225-42036293)
chr8 (20-75)||(26252847-26252902)
chr8 (38-110)||(18805167-18805238)
[»] chr7 (44 HSPs)
chr7 (20-110)||(16917716-16917806)
chr7 (20-110)||(25637651-25637741)
chr7 (21-110)||(9181535-9181624)
chr7 (21-110)||(15712368-15712457)
chr7 (20-110)||(7732940-7733030)
chr7 (20-110)||(48248045-48248135)
chr7 (20-110)||(5745642-5745732)
chr7 (20-110)||(11971337-11971427)
chr7 (20-110)||(27245657-27245747)
chr7 (21-110)||(28687596-28687685)
chr7 (20-112)||(26047958-26048050)
chr7 (20-110)||(786785-786875)
chr7 (20-110)||(2758151-2758241)
chr7 (20-112)||(14311740-14311832)
chr7 (23-110)||(16081302-16081389)
chr7 (20-110)||(7732491-7732581)
chr7 (20-110)||(5333883-5333973)
chr7 (20-110)||(26026771-26026861)
chr7 (21-110)||(5334273-5334362)
chr7 (22-106)||(35160660-35160746)
chr7 (20-110)||(26026320-26026410)
chr7 (21-110)||(48247590-48247679)
chr7 (23-110)||(787242-787329)
chr7 (23-110)||(34595228-34595315)
chr7 (20-107)||(35161255-35161342)
chr7 (20-110)||(9181865-9181955)
chr7 (20-110)||(25637200-25637290)
chr7 (32-110)||(27245206-27245284)
chr7 (20-110)||(28687952-28688041)
chr7 (20-110)||(39388721-39388811)
chr7 (21-110)||(24929762-24929851)
chr7 (23-110)||(39136689-39136776)
chr7 (20-110)||(16081752-16081842)
chr7 (20-110)||(26048399-26048489)
chr7 (21-110)||(9394184-9394272)
chr7 (27-110)||(11973862-11973945)
chr7 (31-110)||(35579349-35579428)
chr7 (48-110)||(40669689-40669751)
chr7 (25-110)||(39136991-39137076)
chr7 (31-110)||(9393739-9393818)
chr7 (23-110)||(49064037-49064124)
chr7 (20-110)||(14311318-14311408)
chr7 (23-110)||(45815347-45815431)
chr7 (66-110)||(34594586-34594630)
[»] chr6 (19 HSPs)
chr6 (20-110)||(24640638-24640728)
chr6 (20-110)||(5114471-5114561)
chr6 (20-110)||(25472466-25472556)
chr6 (23-110)||(30251148-30251235)
chr6 (20-110)||(25468852-25468942)
chr6 (20-110)||(31573723-31573814)
chr6 (20-110)||(31574178-31574268)
chr6 (20-110)||(31073595-31073685)
chr6 (20-110)||(5120922-5121012)
chr6 (20-110)||(29891533-29891627)
chr6 (34-110)||(31073146-31073222)
chr6 (20-110)||(35163640-35163730)
chr6 (20-110)||(32836449-32836539)
chr6 (20-110)||(28636295-28636385)
chr6 (20-110)||(29891083-29891173)
chr6 (63-110)||(22534220-22534267)
chr6 (23-110)||(33095717-33095804)
chr6 (31-110)||(35163187-35163266)
chr6 (41-110)||(31242809-31242878)
[»] chr4 (55 HSPs)
chr4 (20-110)||(21034238-21034328)
chr4 (20-110)||(28465534-28465624)
chr4 (20-110)||(34789385-34789475)
chr4 (20-110)||(54441022-54441112)
chr4 (20-110)||(12593027-12593117)
chr4 (20-110)||(26974286-26974376)
chr4 (20-110)||(56077777-56077867)
chr4 (20-110)||(6616675-6616765)
chr4 (22-110)||(24851319-24851407)
chr4 (20-110)||(14440281-14440371)
chr4 (20-110)||(33777635-33777725)
chr4 (20-110)||(41114160-41114250)
chr4 (20-110)||(45839003-45839092)
chr4 (21-110)||(16214949-16215038)
chr4 (21-110)||(28166007-28166096)
chr4 (20-110)||(34807119-34807209)
chr4 (20-110)||(46736658-46736748)
chr4 (25-110)||(1397598-1397683)
chr4 (22-110)||(41608870-41608958)
chr4 (20-110)||(33689832-33689922)
chr4 (20-110)||(34807592-34807682)
chr4 (20-110)||(35643558-35643648)
chr4 (20-110)||(46737108-46737198)
chr4 (21-110)||(12593477-12593566)
chr4 (20-110)||(41608377-41608465)
chr4 (23-110)||(54440574-54440661)
chr4 (20-110)||(14439831-14439921)
chr4 (20-110)||(19529147-19529237)
chr4 (20-110)||(28465084-28465174)
chr4 (20-110)||(34789836-34789926)
chr4 (21-110)||(21034691-21034780)
chr4 (20-110)||(19528872-19528962)
chr4 (20-110)||(24851919-24852009)
chr4 (20-110)||(36168332-36168422)
chr4 (20-110)||(36168784-36168874)
chr4 (20-110)||(55677411-55677501)
chr4 (20-88)||(17504412-17504480)
chr4 (20-99)||(35193322-35193401)
chr4 (20-110)||(33778065-33778155)
chr4 (20-106)||(45838554-45838640)
chr4 (23-110)||(229615-229702)
chr4 (23-110)||(23986523-23986610)
chr4 (20-110)||(26974698-26974788)
chr4 (21-107)||(30597973-30598059)
chr4 (23-110)||(229164-229251)
chr4 (21-110)||(6617116-6617205)
chr4 (63-110)||(35193798-35193845)
chr4 (47-110)||(35644042-35644105)
chr4 (31-110)||(40160554-40160633)
chr4 (23-110)||(51309961-51310048)
chr4 (20-110)||(40160097-40160187)
chr4 (40-110)||(44219378-44219448)
chr4 (33-110)||(10795777-10795854)
chr4 (39-100)||(37336620-37336681)
chr4 (38-110)||(24335764-24335836)
[»] chr2 (50 HSPs)
chr2 (20-110)||(38008404-38008494)
chr2 (21-110)||(5560054-5560143)
chr2 (20-110)||(4356209-4356299)
chr2 (20-110)||(11539640-11539730)
chr2 (20-110)||(13315496-13315586)
chr2 (20-110)||(20127739-20127829)
chr2 (20-110)||(16952938-16953028)
chr2 (20-110)||(17060909-17060999)
chr2 (24-110)||(33921069-33921155)
chr2 (20-110)||(43160464-43160554)
chr2 (20-110)||(62960-63050)
chr2 (20-110)||(4809332-4809422)
chr2 (20-110)||(6949454-6949544)
chr2 (28-110)||(15551136-15551218)
chr2 (31-110)||(649801-649880)
chr2 (20-110)||(42192243-42192333)
chr2 (20-110)||(44219647-44219737)
chr2 (20-110)||(44220098-44220188)
chr2 (20-109)||(16175803-16175892)
chr2 (22-111)||(43160011-43160100)
chr2 (20-110)||(4355758-4355848)
chr2 (20-110)||(38007953-38008043)
chr2 (24-110)||(42192700-42192786)
chr2 (21-110)||(32418600-32418689)
chr2 (20-110)||(9330248-9330338)
chr2 (20-110)||(11540091-11540181)
chr2 (20-110)||(20128190-20128280)
chr2 (20-110)||(33920615-33920705)
chr2 (21-110)||(13399874-13399962)
chr2 (21-110)||(24140128-24140217)
chr2 (52-110)||(9329833-9329892)
chr2 (20-110)||(63417-63507)
chr2 (20-110)||(649530-649620)
chr2 (20-110)||(15550676-15550766)
chr2 (20-110)||(31797230-31797320)
chr2 (21-110)||(6949898-6949987)
chr2 (21-110)||(25336054-25336143)
chr2 (21-110)||(43216163-43216252)
chr2 (51-110)||(9329915-9329974)
chr2 (23-110)||(20495196-20495283)
chr2 (23-110)||(28143485-28143572)
chr2 (20-110)||(4808882-4808972)
chr2 (20-110)||(16953387-16953477)
chr2 (21-110)||(32418162-32418249)
chr2 (27-110)||(14942306-14942389)
chr2 (20-75)||(13399460-13399515)
chr2 (27-110)||(22445642-22445724)
chr2 (23-73)||(5035903-5035953)
chr2 (27-103)||(2190536-2190612)
chr2 (38-110)||(3824179-3824251)
[»] scaffold0712 (2 HSPs)
scaffold0712 (20-110)||(6395-6485)
scaffold0712 (24-110)||(6853-6939)
[»] scaffold0709 (2 HSPs)
scaffold0709 (20-110)||(6413-6503)
scaffold0709 (24-110)||(6871-6957)
[»] scaffold0097 (2 HSPs)
scaffold0097 (20-110)||(46721-46811)
scaffold0097 (20-110)||(46269-46359)
[»] scaffold0007 (2 HSPs)
scaffold0007 (23-110)||(205823-205910)
scaffold0007 (23-110)||(210793-210880)
[»] scaffold0021 (1 HSPs)
scaffold0021 (23-76)||(159337-159390)


Alignment Details
Target: chr5 (Bit Score: 250; Significance: 1e-139; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 118 - 375
Target Start/End: Original strand, 12549969 - 12550226
Alignment:
Q  118 taaaattaaaaaggtagagtaatttaaattctctaacttttgatacaatattgaattgtaattaaattcatcccatgatctattataaattagcttcttt 217  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12549969 taaaattaaaaaggtaaagtaatttaaattctctaacttttgatacaatattgaatggtaattaaattcatcccatgatctattataaattagcttcttt 12550068  T
Q  218 tgtctctatctttcctaccacacaactataacacccctagattgcgtgagaatcttagttcttcattttaataatgttataacattgtctttgactttaa 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12550069 tgtctctatctttcctaccacacaactataacacccctagattgcgtgagaatcttagttcttcattttaataatgttataacattgtctttgactttaa 12550168  T
Q  318 atggctaccaaaaagtttgttctatgggatgtaacataggaggaaacactgtgttggc 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12550169 atggctaccaaaaagtttgttctatgggatgtaacataggaggaaacactgtgttggc 12550226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 28290097 - 28290187
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28290097 catatagtttaaggacgattttgttcgatttaaaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 28290187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 15029762 - 15029852
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  15029762 catatagtttaaggacgattttgttcgatttaaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaa 15029852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 18149826 - 18149736
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| || ||||||||||| |||||||||||||||    
T  18149826 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtccaaatggtaggatcaaaagtgtaattaa 18149736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 19291449 - 19291359
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  19291449 catatagtttaaggacgattttgttcgatttaaaaaagataggaccatttttgtgagttgttcaaaatagtaggaccaaaagtgtaattaa 19291359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 8419074 - 8419163
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  8419074 atatagtttaaggacgattttgttcaatttaaaaaagataggaccatattcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 8419163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 14340478 - 14340401
Alignment:
Q  33 gacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||    
T  14340478 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaa 14340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 21370776 - 21370689
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| |||| | |||||||    
T  21370776 atagtttaaagacgattttgttcgatttaaaaaagatataaccattttcgtcagttggtcaaaatagtaggacaaaaaatataattaa 21370689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 15115546 - 15115635
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||| ||||||||  |||| |||||||||||||||    
T  15115546 atatagtttaaggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaa 15115635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 4967224 - 4967314
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||||||| |||||||| ||||||||  ||||||||||||||||||||    
T  4967224 catatagtttagggacgattttgttcgatttaaaagaggtaagaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 4967314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 38901093 - 38901183
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||| | ||  ||||||||||||  ||  ||||||||| ||||||||||||||||||||    
T  38901093 catatagtttaaggacgattttgttcgatttaaaaagggtaggaccattttcgtgctttagtcaaaatggaaggaccaaaagtgtaattaa 38901183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 4966909 - 4966819
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| ||  |  || |||||||||||||| ||||||||  ||||||||||||||||||||    
T  4966909 catatagtttagggacgattttgttcgatttaaaagaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 4966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 38900737 - 38900648
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaatta 109  Q
    |||||| |||| ||||||||||||||||||||||| || ||  | ||||||||||||||| ||||||||  |||||||||||||||||||    
T  38900737 catataatttagggacgattttgttcgatttaaaagaggtaggatcattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 39083450 - 39083362
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||| || |||||||||||||||||||| |||  ||||||||||||||||| |||||||| ||||| | |||||||||||||    
T  39083450 atatagtttaagaacaattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggatc-aaagtgtaattaa 39083362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 22651767 - 22651854
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||||||| ||||||  | ||||||||||||||| || ||||||||  ||||| ||||||||||||||    
T  22651767 atagtttatggacgattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaa 22651854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 28289777 - 28289687
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||| ||||||||||||||||||||||| || ||| || | |||||||||||| ||||||||  |||| |||||||||||||||    
T  28289777 catataatttagggacgattttgttcgatttaaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 28289687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 32697679 - 32697769
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||||| |||||||||||||| || ||  |||| |||||||||||| ||||||||  | ||||||||||||||||||    
T  32697679 catatagtttagggacgattctgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaa 32697769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 14340864 - 14340953
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||||||||||||||||||||| |  ||| |||| |||||||||||| ||||||||  || ||||||| |||||||||    
T  14340864 atatagtttatggacgattttgttcgatttaaaagatgtatgaccaatttcgtgagttggtcaaaatgcaagtaccaaaaatgtaattaa 14340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 32305908 - 32305843
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatg 88  Q
    |||||||| ||||||||||||||||||||||| || || ||| ||||||||||| |||||||||||    
T  32305908 atagtttagggacgattttgttcgatttaaaagaggtagaacaattttcgtgagctgatcaaaatg 32305843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 10721868 - 10721789
Alignment:
Q  31 aggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||| ||| ||| |  |||||||||||||| || ||||||||  |||||||||| |||||||||    
T  10721868 aggacgattttgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaa 10721789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 20266371 - 20266458
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||||||| ||| ||| || ||||||||||| || || |||||||   ||||||||||||| ||||||    
T  20266371 atagtttagggacgattttgttcgatttgaaagagacatgaccattttcgtaagctggtcaaaatacgaggaccaaaagtgcaattaa 20266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 5161675 - 5161609
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaa 86  Q
    |||||| ||||| ||| ||||||||||||||||||||||||| || |||||||||| ||||| ||||    
T  5161675 catataatttaaagacaattttgttcgatttaaaaaagatatgacaattttcgtgatttgattaaaa 5161609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 16752675 - 16752585
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||| ||| |   || | |||||||||||| || ||||||||   |||||||||||||||||||    
T  16752675 catatagtttatggacgattttgttcgatttgaaagaagcatgatcattttcgtgagctggtcaaaatgcagggaccaaaagtgtaattaa 16752585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 21371149 - 21371239
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||| ||||||||| || ||  |||| |||  ||||||| ||||||||  |||| |||||||||||||||    
T  21371149 catatagtttagggacgattttgtttgatttaaaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaa 21371239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 17260676 - 17260763
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||| | ||||||||||||| ||| || || || ||||||||||| ||| ||||||||  ||||||||||||| ||||||    
T  17260676 atagtttagggatggttttgttcgatttgaaagaggtagaatcattttcgtgaattggtcaaaatgcgaggaccaaaagtgcaattaa 17260763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 18150177 - 18150267
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||| ||||||||||||||||||| || ||  |||| |||||||||||  |||||||   |||| || ||||||||||||    
T  18150177 catatagtttagggatgattttgttcgatttaaaagaggtaggaccaatttcgtgagtttgtcaaaatacaaggatcacaagtgtaattaa 18150267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 27307513 - 27307603
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||| ||||||||||||| ||| ||  | ||||||||||||||  || ||||||||   ||||||||||| |||||||    
T  27307513 catatagtttatggacggttttgttcgatttgaaagagggagaaccattttcgtgaactggtcaaaatgcggggaccaaaagtctaattaa 27307603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 12549931 - 12549967
Alignment:
Q  118 taaaattaaaaaggtagagtaatttaaattctctaac 154  Q
    |||||||||||||||| ||||||||||||||||||||    
T  12549931 taaaattaaaaaggtaaagtaatttaaattctctaac 12549967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 41834555 - 41834602
Alignment:
Q  63 accattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||| || ||||||||  ||||||||||||||||||||    
T  41834555 accattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 41834602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 5162022 - 5162112
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||| ||||||||||||||||||||||| || ||| || | | || ||||||| ||||||||  ||||  |||| |||||||||    
T  5162022 catataatttagggacgattttgttcgatttaaaagaggtatgactaatctcatgagttggtcaaaatgcaaggataaaaaatgtaattaa 5162112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 16753065 - 16753113
Alignment:
Q  62 aaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||| ||||||||  | |||||||| |||||||||    
T  16753065 aaccattttcgtgagttggtcaaaatgcgatgaccaaaaatgtaattaa 16753113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 28494919 - 28494847
Alignment:
Q  38 ttttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||| ||| ||  | |||||||||| |||  || ||||||||  ||||||||||||||||||||    
T  28494919 ttttgttcgatttgaaagaggcagaaccattttcctgaactggtcaaaatgtaaggaccaaaagtgtaattaa 28494847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 44676925 - 44677015
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44676925 catatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 44677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 43678388 - 43678298
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  43678388 catatagtttaaggacgattttgttcgatttaaaaaagatatgaccatgttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 43678298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 49720814 - 49720904
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  49720814 catatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 49720904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 49951639 - 49951549
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49951639 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 49951549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 2051388 - 2051298
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2051388 catatagtttaagaacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 2051298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 16701245 - 16701335
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  16701245 catatagtttaaggacgattttgttcgaattaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaa 16701335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 38535402 - 38535312
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  38535402 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaattaa 38535312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 41998322 - 41998232
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  41998322 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaa 41998232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 51473309 - 51473399
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||    
T  51473309 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 51473399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 47431789 - 47431699
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47431789 catatagtttaaagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 47431699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 50662865 - 50662955
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||  |||||||||||||||||||||| |||||||    
T  50662865 catatagtttaaggacgattttgttcgatttaaaaaagatatgactattttcgtgagtttgtcaaaatggtaggaccaaaagtataattaa 50662955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 51828411 - 51828501
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  51828411 catatagtttaaggacaattttgttcgatttaaaaaatatatgaccattttcgtgagttggtcaaagtggtaggaccaaaagtgtaattaa 51828501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 14654292 - 14654202
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| | |||||||||||||||    
T  14654292 catatagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtagtatcaaaagtgtaattaa 14654202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 46013876 - 46013966
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||| |||||||| ||| |||||||||||||||||    
T  46013876 catatagtttaaggacgattttgttcgatttaaaaaagatagaaccatttttgggagttggtcaaaatgatagtaccaaaagtgtaattaa 46013966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 51828993 - 51829083
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||| || ||||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  51828993 catatagtttaaggacgattttgtttgaattaaaaaagatacgaccattttcgtgagttgatcaaaatagtatgaccaaaagtgtaattaa 51829083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 329939 - 329850
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaatta 109  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||| || ||||||||||||||||    
T  329939 catatagtttaaggacgattttgttcgatttaaaaaagttaggaccattttcgtgagttggtcaaaatggaagaaccaaaagtgtaatta 329850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 55389698 - 55389609
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaatta 109  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| || |||||| |||||||||||||||||||    
T  55389698 catatagtttaaggacgattttgttcgatttaaaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaatta 55389609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 34104731 - 34104644
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaat 107  Q
    |||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||| || |||||||||||    
T  34104731 catatagtttaatgacgattttgttcaatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtagaacaaaaagtgtaat 34104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 32730842 - 32730932
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||| | ||||||||| ||||||||||||||||||    
T  32730842 catatagtttaaggacgattttgttcaatttaaaaaagataggaccattttcttgagttggttaaaatggtatgaccaaaagtgtaattaa 32730932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 330289 - 330379
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||| |||||||||||| ||  ||||||||||||||||| ||||||||  ||||||||| ||||||||||    
T  330289 catatagtttagggacgattttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaa 330379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 22370689 - 22370599
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||| | |||||||||| ||  ||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  22370689 catatagtttagggacgattttgtttggtttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 40838745 - 40838655
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||| ||||||||| || ||| ||||||||||||||||| ||||||||  |||| |||||||||||||||    
T  40838745 catatagtttatggacgattttgtttgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaa 40838655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 40839105 - 40839195
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  ||||||||||||||||  ||||||||  ||||||||||||||||||||    
T  40839105 catatagtttagggacgattttgttcgatttaaaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaa 40839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 51828050 - 51827960
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  51828050 catatagtttagggacgattttgttcgatttaaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 51827960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 52236909 - 52236819
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||| ||||||||||||| ||| ||||||||  ||||| ||||||||||||||    
T  52236909 catatagtttagggacgattttgttcgatttaaaagaggtatgaccattttcgtgaattgttcaaaatgcgaggactaaaagtgtaattaa 52236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 52237270 - 52237360
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||| ||||||||||||||||||||||| || ||  ||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  52237270 catataatttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 52237360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 52375784 - 52375874
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||||||||||| |||||||| || ||  ||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  52375784 catatagtttatggacgattttgttcaatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 52375874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 33412609 - 33412697
Alignment:
Q  22 tatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||| ||||||||||||||||||  ||| ||| | ||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  33412609 tatagtttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaattaa 33412697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 14654645 - 14654732
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||||||||||| || || | ||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  14654645 atagtttacggacgattttgttcgatttaaaagaggtagagccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 14654732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 36701196 - 36701109
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||||||| ||| ||  || | ||||||||||||||||||||||||  ||||||||||||||||||||    
T  36701196 atagtttatggacgattttgttcgatttgaaagaggcatgatcattttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaa 36701109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 16689451 - 16689361
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||| ||||||||||||||||||||||| || ||  |||| |||||||||||| |||||||| ||||||||||| |||||||||    
T  16689451 catatattttatggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgctaggaccaaaactgtaattaa 16689361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 30513814 - 30513725
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||| |||||||| ||||||||||||||||||  ||||||||||||||||  ||||||||  |||||||||| |||||||||    
T  30513814 catatagtttaag-acgattttattcgatttaaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaa 30513725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 40275186 - 40275096
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||| |||||| |||| |||||||||||||||||| || ||  ||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  40275186 catagagtttagggacaattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 40275096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 43222483 - 43222393
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||  | ||||||||  ||||||||    
T  43222483 catatagtttagggacgattttgttcgatttaaaagagacataactattttcgtgagttggtcaaaatgtgatgaccaaaaacgtaattaa 43222393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 43678737 - 43678827
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || |   ||||  ||||||||||||||||||||  ||||||||||||||||||||    
T  43678737 catatagtttatggacgattttgttcgatttaaaagaggttggaccaagttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 43678827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 46013515 - 46013425
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||| ||||||||||||||||||||||| || ||| |||| |||||||||||| ||||||||  |||| |||||||||||||||    
T  46013515 catatactttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 46013425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 52375420 - 52375330
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||||||||||| |||||||| || ||| ||||||||||||| ||| | ||||||  ||||||||||||||||||||    
T  52375420 catatagtttagggacgattttgttcaatttaaaagaggtatgaccattttcgtgaattggttaaaatgtgaggaccaaaagtgtaattaa 52375330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 36701552 - 36701639
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||| ||||||||||||||| ||| ||| || |||||||||||||| || ||||||||  ||||||||||||||||||||    
T  36701552 atagtttagggatgattttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 36701639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 2044364 - 2044274
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||| ||||||||||||||||||||||| || ||| ||||||||| ||||||| ||||||||  || |||||||||| ||||||    
T  2044364 catataatttatggacgattttgttcgatttaaaagaggtatgaccattttcatgagttggtcaaaatgcgagaaccaaaagtgaaattaa 2044274  T

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Target: chr3; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 40275547 - 40275636
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||  |||||||||||||||||||||| || ||  ||||||| ||||||||| ||||||||  ||||||||||||||||||||    
T  40275547 catatagtttagagacgattttgttcgatttaaaagaggtaggaccattt-cgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 40275636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 49952003 - 49952089
Alignment:
Q  24 tagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| |||||||||||||||||||||| || ||  |||| |||||||||||| ||||||||  |||||||||| |||||||||    
T  49952003 tagtttaatgacgattttgttcgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 49952089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 51828632 - 51828542
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| |||||| | ||| ||||||||  ||||||||||||||||||||    
T  51828632 catatagtttacggacgattttgttcgatttaaaagaggtaagaccaatttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaa 51828542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 55390050 - 55390140
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||  |||||||||||| |||||||||||| ||  ||||||||||||| ||| | ||||||  ||||||||||||||||||||    
T  55390050 catatagtttagtgacgattttgtttgatttaaaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaa 55390140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 39010482 - 39010554
Alignment:
Q  28 ttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaa 100  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||| || ||||||||| |||| |||||    
T  39010482 ttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagctggtcaaaatggcaggatcaaaa 39010554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 49720462 - 49720374
Alignment:
Q  22 tatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||| |||| ||||||||||||||||||||||| || ||  |||| |||||||||||| ||||||||  |||| |||||||||||||||    
T  49720462 tatactttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 49720374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 25534971 - 25534893
Alignment:
Q  32 ggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||| || ||  ||||||||| ||| ||| ||||||||  ||||||||||||||||||||    
T  25534971 ggacgattttgttcgatttaaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaa 25534893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 32730482 - 32730392
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||||||||||| |||||||| || ||  |||| ||||  |||||| ||||||||  ||||||||||||||||||||    
T  32730482 catatagtttagggacgattttgttcaatttaaaagaggtaggaccaatttcaagagttggtcaaaatgcaaggaccaaaagtgtaattaa 32730392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 41998693 - 41998771
Alignment:
Q  32 ggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||| || ||  |||| |||||| ||||| ||||||||  ||||||||||||||||||||    
T  41998693 ggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 41998771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 44676565 - 44676475
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||| ||||||||||||||||| || ||| | || |||| ||||||  ||||||||  ||||||||||||||||||||    
T  44676565 catatagtttagggacggttttgttcgatttaaaagaggtatgatcaatttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaa 44676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 34105103 - 34105190
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaat 107  Q
    ||||||||||| ||||||||||||||||||||||| ||  |  ||||  ||||| ||||| ||||||||  |||||||||||||||||    
T  34105103 catatagtttagggacgattttgttcgatttaaaagagggaggaccaacttcgtaagttggtcaaaatgcaaggaccaaaagtgtaat 34105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 27199795 - 27199705
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||  |||| ||||||||||||| ||| ||  || |||||||||||||| || ||||||||  |||||||||| |||||||||    
T  27199795 catatagtttagtgacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaatgtaattaa 27199705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 39010168 - 39010078
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||| |||||||| || |||||||||||||||||| || ||| | || ||| |||||||| ||||||||  |||||||||| |||||||||    
T  39010168 catacagtttaagaacaattttgttcgatttaaaagaggtatgagcaattttgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 39010078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 43222843 - 43222933
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||| |||||| ||||||||||||||||||||||| ||  || |||||||||||| | |  ||||||||  |||||||||||||| |||||    
T  43222843 cataaagtttagggacgattttgttcgatttaaaagaggcatgaccattttcgtgcgcttgtcaaaatgcgaggaccaaaagtgtgattaa 43222933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 49407889 - 49407799
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||| |||||| ||||| |||||||| |||| ||| ||  || |||||||||||||| || ||||||||  ||||||||||||||||||||    
T  49407889 cataaagtttagggacggttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 49407799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 49408252 - 49408324
Alignment:
Q  38 ttttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||| ||| ||| | ||||||||||||||| || ||||||||  || |||||||||||||||||    
T  49408252 ttttgttcgatttgaaagagacacaaccattttcgtgagatggtcaaaatgcgagtaccaaaagtgtaattaa 49408324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 27200155 - 27200234
Alignment:
Q  31 aggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| | ||||||||||| ||| ||  | ||||||||||||||| || ||||||||  ||||||||||||||||||||    
T  27200155 aggacggtattgttcgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 27200234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 37076138 - 37076217
Alignment:
Q  31 aggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||| ||| ||     |||||||||||||| |||||||||||  |||||||||| |||||||||    
T  37076138 aggacgattttgttcgatttgaaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaatgtaattaa 37076217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 38535748 - 38535838
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||||||| |||||||||||| ||||   || | |||||| ||||| ||||||||   ||||||||||| |||||||    
T  38535748 catatagtttagggacgattttattcgatttaaaagagatcggactaatttcgtaagttggtcaaaatgcacggaccaaaagtataattaa 38535838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 8873770 - 8873694
Alignment:
Q  33 gacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||| ||||||||||||||||| ||| || ||||||||||| |  |||||||||||  |||||||||| |||||||||    
T  8873770 gacggttttgttcgatttaaaagagacatgaccattttcgtaaactgatcaaaatgcgaggaccaaaa-tgtaattaa 8873694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 50900614 - 50900535
Alignment:
Q  31 aggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| ||||||||||||| ||| || ||  |||||||||||||| ||||||||||   | |||||||||| |||||||    
T  50900614 aggacggttttgttcgatttgaaagagttaggaccattttcgtgagctgatcaaaatttgaagaccaaaagtttaattaa 50900535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 37075779 - 37075689
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||  |||||| ||||| ||| ||  |  ||||||||||||||||| ||||||||    ||||||||||||||||||    
T  37075779 catatagtttagggacgggtttgtttgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaa 37075689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 37505160 - 37505070
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37505160 catatagtttaaggacgattttgttcgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 37505070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 30787251 - 30787341
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  30787251 catatagtttaaggacgattttgttcgattttaaaaagatatgaccattttcgtgagttgatctaaatggtaggatcaaaagtgtaattaa 30787341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 34555835 - 34555925
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  34555835 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaa 34555925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 10279000 - 10279090
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  10279000 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaacggtaggatcaaaagtgtaattaa 10279090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 21938656 - 21938566
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  21938656 catatagtttatggacgattttgttcgatttaaaaaagataagatcattttcgtgagttgatcaaaatggtaagaccaaaagtgtaattaa 21938566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 29439375 - 29439465
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| |||||||||||| ||||||    
T  29439375 catatagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagttgatcaaaatggtgggaccaaaagtgcaattaa 29439465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 44582512 - 44582602
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||| |||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  44582512 catatagtttaaagacgattttgttcgatttgaaaatgatatgaccattttcgtgagttgatcaaaatggtagaaccaaaagtgtaattaa 44582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 50305239 - 50305328
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| | |||||||||| |||||||||||||||||    
T  50305239 atatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggttaaaatggtagaaccaaaagtgtaattaa 50305328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 9992248 - 9992157
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatc-aaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||| || ||||||||||||||||||||||||||||    
T  9992248 catatagtttaaggaccattttgttcgatttaaaaaagataggaccatttccgtgagttggtcaaaaatggtaggaccaaaagtgtaattaa 9992157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 37421397 - 37421488
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaa-gatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  37421397 catatagtttaaggacgattttgttcgatttaaaaaaagataggaccattttcgtgagttggtcaaaatggtatgactaaaagtgtaattaa 37421488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 17641825 - 17641912
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||||||||||| || ||| ||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  17641825 atagtttagggacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 1837598 - 1837508
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||| |||||||||||||||||| |||||| | || |||||||||||||||||||||  ||||||||||||||||||||    
T  1837598 catatagtttagggacaattttgttcgatttaaaagagatatgatcaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 1837508  T

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Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 9992608 - 9992698
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||| |||||||||||||||||||||||||||  ||||||||| ||||||  ||||||||  ||||||||||||||||||||    
T  9992608 catatagtttaagcacgattttgttcgatttaaaaaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaa 9992698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 50304532 - 50304442
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||  |||||||||||||||||||||| || ||| ||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  50304532 catatagtttagagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 50304442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 16299135 - 16299224
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||| ||| |||||| |||  |||||||||| |||||||||||||||||||||| |||||| |||||||    
T  16299135 catatagtttaaggacgattttgttcaattaaaaaaa-ataggaccattttcgcgagttgatcaaaatggtaggacaaaaagtataattaa 16299224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 45048248 - 45048158
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||||||||||| |||||||| || || |||||||||||| ||||| ||||||||  ||||||||||||||||||||    
T  45048248 catatagtttatggacgattttgttcaatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 45048158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 44954319 - 44954228
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaat 111  Q
    |||||| ||||| |||||||||||| |||||||||||| ||| ||||||||||||||||| |||||||||  |||| |||| ||||||||||    
T  44954319 catataatttaaagacgattttgttggatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgggtggacaaaaaatgtaattaat 44954228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 2868004 - 2867914
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||| ||| |||||||||||||||||| |||||| | ||||||||||||||| ||||||||  | |||||||| |||||||||    
T  2868004 catatagtttaacgacaattttgttcgatttaaaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgtaattaa 2867914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 8230094 - 8230184
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| | | ||||||||  || ||||||| |||||||||    
T  8230094 catatagtttagggacgattttgttcgatttaaaagaggtataaccattttcgtgaataggtcaaaatgcgagaaccaaaaatgtaattaa 8230184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 10278641 - 10278551
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  | || |||||||||||| ||||||||  ||||||||||||||||||||    
T  10278641 catatagtttagggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 10278551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 16298775 - 16298685
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||| |||| |||||||||||| ||||||||  ||| |||||| |||||||||    
T  16298775 catatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaagggccaaaaatgtaattaa 16298685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 29439019 - 29438933
Alignment:
Q  24 tagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||| ||||||||||||||||||||||| || ||  |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  29439019 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 29438933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 44954679 - 44954769
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||| ||||||||| |||||||||||| ||| | ||||||| ||||||| ||||||||  ||||||||||||||||||||    
T  44954679 catatagtttatggatgattttgtttgatttaaaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaa 44954769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 30786865 - 30786774
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataacc-attttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  ||| |||||||||||||| ||||||||  || |||||||||||||||||    
T  30786865 catatagtttagggacgattttgttcgatttaaaagaggtaggaccaattttcgtgagttggtcaaaatgcaagaaccaaaagtgtaattaa 30786774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 2868161 - 2868251
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| || ||||||||||||||||||||||| || ||  |||||||||||| |||| ||||||||  |||| |||||||||||||||    
T  2868161 catatagtgtagggacgattttgttcgatttaaaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaagtgtaattaa 2868251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 8229730 - 8229640
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||  ||||||||| |||||||||||| |  || || ||||||||||||||||||||||||  |||| |||||||||||||||    
T  8229730 catatagtttagagacgattttattcgatttaaaagatgtagaatcattttcgtgagttgatcaaaatgtgaggatcaaaagtgtaattaa 8229640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 34555472 - 34555382
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| ||||| |||||  ||||||||  ||||||||||||||||||||    
T  34555472 catatagtttagggacgattttgttcgatttaaaagaggtagcaccaatttcgcgagttagtcaaaatgcaaggaccaaaagtgtaattaa 34555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 37421253 - 37421163
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| |||||||| ||| ||||||||  | ||||||||||||||||||    
T  37421253 catatagtttagggacgattttgttcgatttaaaagaggtaagaccaatttcgtgaattggtcaaaatgcaaagaccaaaagtgtaattaa 37421163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 39485158 - 39485068
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||| ||| || ||  |||||||||||||| |  ||||||||  ||||||||||||||||||||    
T  39485158 catatagtttagggacgattttgttcgatttgaaagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaagtgtaattaa 39485068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 6224789 - 6224700
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||| ||||||||||||||||||||||||||||||   | |||||||||  ||||||| |||||||| ||||| ||||| |||||||||    
T  6224789 atataatttaaggacgattttgttcgatttaaaaaaacaagaaccatttttatgagttggtcaaaatgataggatcaaaaatgtaattaa 6224700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 52335964 - 52336053
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||||||||||||||||||||| || ||  |||| |||| ||||||| |||||||| ||| |||||||| ||||||||    
T  52335964 atatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaaaatgatagaaccaaaagagtaattaa 52336053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 4080114 - 4080026
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaatt 108  Q
    ||||||||||| ||||||||||||||||||||||| || ||  | || |||||||||||| |||| |||  ||||||||||||||||||    
T  4080114 catatagtttagggacgattttgttcgatttaaaataggtacgatcaatttcgtgagttggtcaagatgcaaggaccaaaagtgtaatt 4080026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 44291391 - 44291304
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| |||||||||||||| |||| ||| ||  ||||||||||||||||| || ||||||||  ||||||||||||| ||||||    
T  44291391 atagtttatggacgattttgttcaatttgaaagaggcataaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaa 44291304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 50926320 - 50926233
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||||||| ||| || ||| |  ||||||||||| || ||||||||| |||||||||| |||||||||    
T  50926320 atagtttagggacgattttgttcgatttgaaagaggtatgattattttcgtgagctggtcaaaatgggaggaccaaaactgtaattaa 50926233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 44582150 - 44582060
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| ||||  |||||||||||||||||||||| || ||  |||| |||||| ||||| ||||||||  ||||||||||||||||||||    
T  44582150 catataatttagagacgattttgttcgatttaaaagaggtaggaccaatttcgttagttggtcaaaatgtaaggaccaaaagtgtaattaa 44582060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 17088593 - 17088682
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||| ||||||| ||||| ||| ||  || |||||||||||||| || ||||||||  ||||||||||||||||||||    
T  17088593 atatagtttagggacggttttgtttgatttgaaagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaa 17088682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 23340275 - 23340186
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| |  |||||||||||||||||||| |||||  |||| |||||||||||| ||||||||  | || |||||||||||||||    
T  23340275 atatagtttatgagcgattttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaa 23340186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 17641456 - 17641397
Alignment:
Q  22 tatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgat 81  Q
    ||||||||||| || ||||||||||||||||||||| ||| ||||||||||||| |||||    
T  17641456 tatagtttaagaacaattttgttcgatttaaaaaaggtatgaccattttcgtgaattgat 17641397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 23526986 - 23527073
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||  |||| ||||||||||||||||||||  || ||||||||| |||| |||||||||||  |||| ||||||| |||||||    
T  23526986 atagtttagagacggttttgttcgatttaaaaaaggcatgaccattttcatgagctgatcaaaatgtgaggatcaaaagtataattaa 23527073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 444004 - 444094
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| | ||||||||||||||||||||| || ||| || | |||||||||||| ||||||||  | || ||||||| |||||||    
T  444004 catatagtttaggaacgattttgttcgatttaaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaagatcaaaagtataattaa 444094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 37505520 - 37505610
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||| | ||||||| |||||| | || |||||||||||| |||||||   |||||||||| | |||||||    
T  37505520 catatagtttatggacgattttgtttgttttaaaagagatatgatcaatttcgtgagttggtcaaaataaaaggaccaaaaatataattaa 37505610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 23526748 - 23526665
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaa 106  Q
    ||||| || ||| ||||||||||||||||||| ||  |  |||||||||||||| || ||||||||  ||||||||||||||||    
T  23526748 atagtctagggatgattttgttcgatttaaaagaggcaggaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaa 23526665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 29021325 - 29021408
Alignment:
Q  27 tttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||| ||||||||||||||||||| ||| ||  || | |||||||||||| || ||||||||  ||||||||||||| ||||||    
T  29021325 tttagggacgattttgttcgatttgaaagaggcatgaacattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaa 29021408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 44802627 - 44802714
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||  ||| ||| ||  || |||| ||||||||| || ||||||||  ||||||||||||||||||||    
T  44802627 atagtttagggacgattttgttccgtttgaaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 44802714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 45048599 - 45048678
Alignment:
Q  31 aggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| ||||||||||||  ||| || ||| |||||||||||||  || ||||||||  ||||||||||||||||||||    
T  45048599 aggacggttttgttcgattggaaagaggtatgaccattttcgtgaactggtcaaaatgcgaggaccaaaagtgtaattaa 45048678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 50926697 - 50926784
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||| ||||||||||||| ||| |||    |||||||||||||| || ||||||||  | ||||||||||||||||||    
T  50926697 atagtttagggacggttttgttcgatttgaaagagacgggaccattttcgtgagctggtcaaaatgcgatgaccaaaagtgtaattaa 50926784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 25274845 - 25274760
Alignment:
Q  24 tagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaatta 109  Q
    ||||||| | ||| ||||||||||||| ||| ||  || |||||||||||||| || ||||||||  ||||||||||||| |||||    
T  25274845 tagtttaggaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgcaatta 25274760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 29020966 - 29020906
Alignment:
Q  27 tttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaat 87  Q
    |||||||| ||||||||||||||||||| ||| || ||||||||  |||| ||||||||||    
T  29020966 tttaaggatgattttgttcgatttaaaagagacatgaccatttttatgagctgatcaaaat 29020906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 50419473 - 50419393
Alignment:
Q  30 aaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| | |||||||||||| ||||||| || |||||||| |||||||| |  |||||  ||||||||||||| ||||||    
T  50419473 aaggactactttgttcgatttgaaaaagacatgaccatttttgtgagttggtttaaatgcgaggaccaaaagtgcaattaa 50419393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 17088228 - 17088149
Alignment:
Q  31 aggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| ||||||||||||| ||| ||  | ||||||||||||||| || ||||||||  | |||||| |||||||||||    
T  17088228 aggacggttttgttcgatttgaaagaggcaaaaccattttcgtgagctggtcaaaatgcgatgaccaacagtgtaattaa 17088149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 5e-38; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 18049683 - 18049595
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaatt 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  18049683 catatagtttaaggacgattttgttcgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 18049595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 18428215 - 18428305
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18428215 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 18428305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 9797180 - 9797271
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaat 111  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9797180 catatagtttaaggacgattttatttgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaat 9797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 599951 - 600041
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  599951 catatagtttaaggacgattttgttccatttaaaaaagatatgaccattttcgttagttggtcaaaatggtaggaccaaaagtgtaattaa 600041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 15256284 - 15256374
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  15256284 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaa 15256374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 28254518 - 28254428
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28254518 catatagtttaaggacgattttgttcaatttaaaatagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 28254428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 41260364 - 41260274
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  41260364 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaa 41260274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 5730910 - 5730820
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||| |||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||||||    
T  5730910 catatagtttaaggacgattttgtttgatttaaaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 5730820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 16578549 - 16578639
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  16578549 catatagtttaatgatgattttgttcgatttgaaaaagatataaccattttcgtgagttcgtcaaaatggtaggaccaaaagtgtaattaa 16578639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 2208806 - 2208717
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||||||| |||||||||||||||    
T  2208806 atatagtttaaggacgattttgttcgatttaaaaaagataggacaattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 2208717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 7910709 - 7910619
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||  |||||||||| |||||||||    
T  7910709 catataatttagggacgattttgttcgatttaaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaa 7910619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 34799172 - 34799082
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||| |||||||||||||||||| |||  ||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  34799172 catatagtttaaggacgactttgttcgatttaaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaagtgtaattaa 34799082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 42035864 - 42035775
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||||||||||||||||||||| || || |||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  42035864 atatagtttatggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 42035775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 35694332 - 35694421
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||  ||  |||||||| |||||||  ||||||||| ||||||||||||||||||||    
T  35694332 atatagtttaaggacgattttgttcgatttaaaaaatgtaggaccatttttgtgagttagtcaaaatggaaggaccaaaagtgtaattaa 35694421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 15255946 - 15255856
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  15255946 catatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 15255856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 18050044 - 18050134
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||| |||| |||||||||||| ||||||||  |||||||||| |||||||||    
T  18050044 catatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 18050134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 7911070 - 7911159
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||||||||||||||||||||| || || |||||||||||||||||| ||||||||  ||||  ||||||||||||||    
T  7911070 atatagtttagggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaa 7911159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 28254880 - 28254969
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||||||||||||||||||||| || ||  |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  28254880 atatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 28254969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 35427266 - 35427355
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||| |||| ||||||||||||||| ||||||| || || |||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  35427266 atataatttagggacgattttgttcggtttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 35427355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 41260714 - 41260804
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||| | || |||||||||||||||||||||  | |||||||||| |||||||    
T  41260714 catatagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttgatcaaaatgcaatgaccaaaagtataattaa 41260804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 599625 - 599535
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||| ||| ||||||||||||||||||| || ||| |||| |||||||||||| ||||||||  |||||||||| |||||||||    
T  599625 catataatttagggatgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 599535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 9796819 - 9796729
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||| ||||||||||||||||||| || ||  |||| ||| |||||||| ||||||||  ||||||||||||||||||||    
T  9796819 catatagtttatggatgattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9796729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 28877354 - 28877432
Alignment:
Q  32 ggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||| ||||||||| |||| ||| || ||||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  28877354 ggacaattttgttcaatttgaaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 28877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 5731265 - 5731355
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||||||||||||||||| ||||| || ||||| |||| ||||||| ||||||||  | ||| |||||| |||||||    
T  5731265 catatagtttatggacgattttgttcgatttataaaaggtagaaccaatttcctgagttggtcaaaatgcaatgacaaaaagtataattaa 5731355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 6115564 - 6115654
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| ||||| |||||| |||||||   |||||||||||| |||||||    
T  6115564 catatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaa 6115654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 16578201 - 16578111
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||| ||||||||||||||||||||||| || ||  |||| |||||||||||| ||||||||  || ||||||| |||||||||    
T  16578201 catataatttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaagaaccaaaaatgtaattaa 16578111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 34799536 - 34799626
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||| |||||||||||||||||| || ||  |||| |||||| | ||| ||||||||  ||||||||||||||||||||    
T  34799536 catatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgttaattggtcaaaatgaaaggaccaaaagtgtaattaa 34799626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 35693960 - 35693871
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| |||||||||| |||||||||||| || || || ||||||||| | ||| ||||||||  |||| |||||||||||||||    
T  35693960 atatagtttatggacgattttattcgatttaaaagaggtagaatcattttcgtaaattggtcaaaatgcaaggatcaaaagtgtaattaa 35693871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 28876993 - 28876910
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaa 106  Q
    |||||||| ||||||||||||||||||| ||| ||  | ||  ||||||||||| |||||||||||  ||||||||||||||||    
T  28876993 atagtttagggacgattttgttcgatttgaaagaggcagaattattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaa 28876910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 35426892 - 35426845
Alignment:
Q  63 accattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  35426892 accattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaa 35426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 18674241 - 18674151
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||||||||||||||||||||  |  | ||||| |||||||| ||| ||||| ||  |||||||| |||||||||||    
T  18674241 catatagtttagggacgattttgttcgatttaaaagtggaagaaccaatttcgtgaattggtcaaagtgcaaggaccaagagtgtaattaa 18674151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 42036225 - 42036293
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatg 88  Q
    ||||||||||| ||||||||||||||||||||||| || ||  | ||||||||| ||||| ||||||||    
T  42036225 catatagtttagggacgattttgttcgatttaaaagaggtaagatcattttcgtaagttggtcaaaatg 42036293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 26252902 - 26252847
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtga 75  Q
    ||||||||||| ||||||||||||||||||||||| |||| | |||| ||||||||    
T  26252902 catatagtttagggacgattttgttcgatttaaaagagatgttaccaatttcgtga 26252847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 18805238 - 18805167
Alignment:
Q  38 ttttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||| ||| | ||||||||||||||| |  ||||||||   |||||||||||||||||||    
T  18805238 ttttgttcgatttaaaagaga-agaaccattttcgtgagcttgtcaaaatgcagggaccaaaagtgtaattaa 18805167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 7e-37; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 16917806 - 16917716
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16917806 catatagtttaaggaggattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 16917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 25637651 - 25637741
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25637651 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 25637741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 9181624 - 9181535
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9181624 atatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9181535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 15712457 - 15712368
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15712457 atatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 15712368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 7732940 - 7733030
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  7732940 catatagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 7733030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 48248045 - 48248135
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  48248045 catatagtttaaggacgattttgttcgatttaaaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 48248135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 5745732 - 5745642
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  5745732 catatagtttaagaaagattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 5745642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 11971427 - 11971337
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| | |||||||||||||||||||||| |||||||    
T  11971427 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtaggtcaaaatggtaggaccaaaagtataattaa 11971337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 27245657 - 27245747
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  27245657 catataatttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaagaccaaaagtataattaa 27245747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 28687685 - 28687596
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||| || ||||||||||||||||||    
T  28687685 atatagtttaaggacgattttgttcgatttataaaagatagaaccattttcgtgagttggtcaaaatgatatgaccaaaagtgtaattaa 28687596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 26048050 - 26047958
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaatt 112  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| || ||||||||| | |||||||||||||||||    
T  26048050 catatagtttaaggacaattttattcgatttaaaaaagatatgaccattttcgtgagttggtcgaaatggtagaatcaaaagtgtaattaatt 26047958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 786875 - 786785
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||  ||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| |||| |||||||||||||||    
T  786875 catatagtttaaggaaaattttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaa 786785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 2758151 - 2758241
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||| |||||||  ||||||||||||||||||||    
T  2758151 catatagtttatggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaagtgtaattaa 2758241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 14311740 - 14311832
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaatt 112  Q
    |||||||||||| ||||||||||||||||||||||||||||  |||||||| |||||||| ||||| ||||| ||| ||||||||||||||||    
T  14311740 catatagtttaaagacgattttgttcgatttaaaaaagataggaccatttttgtgagttggtcaaattggtacgacaaaaagtgtaattaatt 14311832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 16081389 - 16081302
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| | ||||||| ||||||| | ||||||||||||||||||||    
T  16081389 atagtttaaggacgattttgttcgatttaaaaaagataggaccatttccatgagttggtcaaaatagaaggaccaaaagtgtaattaa 16081302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 7732581 - 7732491
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||| || ||  |||| |||||||||||||||||||||  |||||||||| |||||||||    
T  7732581 catatagtttaaggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 7732491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 5333973 - 5333883
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  ||||||||||||||||| ||||||||  |||| |||||||||||||||    
T  5333973 catatagtttagggacgattttgttcgatttaaaagaggtacgaccattttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 5333883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 26026771 - 26026861
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||| | |||||||||||||| ||||||||  ||||||||||||| ||  ||||||| ||||||||||||||||||||||    
T  26026771 catatagtttaaggatggttttgttcgatttataaaagataggaccattttcgtgaatttgtcaaaatagtaggaccaaaagtgtaattaa 26026861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 5334273 - 5334362
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||||||||||||||||||||| || ||  || |||||||||||||| ||||||||  ||||||||||||||||||||    
T  5334273 atatagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 5334362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 35160746 - 35160660
Alignment:
Q  22 tatagtttaaggacgattttgttcgatttaaaaaagatata--accattttcgtgagttgatcaaaatggtaggaccaaaagtgtaa 106  Q
    |||| |||||| ||||||| ||||||||||||||| | |||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  35160746 tataatttaagaacgatttagttcgatttaaaaaaaaaatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 35160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 26026410 - 26026320
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||| |||| ||||||||| || |||||||   ||||||||||||||||||||    
T  26026410 catatagtttatggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaa 26026320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 48247679 - 48247590
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||| |||| ||||||||||||| ||||||||| || ||  |||| |||||||||||||||||||||  ||||||||||||||||||||    
T  48247679 atatactttagggacgattttgtttgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 48247590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 787242 - 787329
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||||||||||| || ||  ||||||||||||||||| |||||||   || |||||||||||||||||    
T  787242 atagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaa 787329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 34595228 - 34595315
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||||||||||| |   |  ||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  34595228 atagtttagggacgattttgttcgatttaaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 34595315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 35161255 - 35161342
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaat 107  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| || ||||||||| ||||||||  |||||||||||||||||    
T  35161255 catatagtttagggacgattttgttcgatttaaaagaggtaggaccaattccgtgagttggtcaaaatgcaaggaccaaaagtgtaat 35161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 9181865 - 9181955
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||| | || |||||||| ||| ||||||||  |||| |||||||||||||||    
T  9181865 catatagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgaattggtcaaaatgcaaggatcaaaagtgtaattaa 9181955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 25637290 - 25637200
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| |||| ||||||| |||| |||  ||||||||||||||||||||    
T  25637290 catatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaatatgcaaggaccaaaagtgtaattaa 25637200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 27245284 - 27245206
Alignment:
Q  32 ggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||| || ||  |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  27245284 ggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 27245206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 28687952 - 28688041
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||| | || |||||||||||| ||||||||  |||||||||| |||||||||    
T  28687952 catatagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaa-tgtaattaa 28688041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 39388721 - 39388811
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||  |||||||||||||||||||||| || ||  || | |||||||||||| ||||||||  ||||||||||||||||||||    
T  39388721 catatagtttagagacgattttgttcgatttaaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 39388811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 24929762 - 24929851
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||||||||||| ||||||||| || ||  |||| |||||||||||| ||||||||  |||||||||| |||||||||    
T  24929762 atatagtttagggacgattttgtttgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 24929851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 39136776 - 39136689
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||||||| ||| ||  | ||||||||||||||| || ||||||||  |||| |||||||||||||||    
T  39136776 atagtttagggacgattttgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatgcaaggatcaaaagtgtaattaa 39136689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 16081752 - 16081842
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||| ||||||||||||||||||| || ||  | || |||||||||||| ||||||||  ||||||||| ||||||||||    
T  16081752 catatagtttagggatgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaggtgtaattaa 16081842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 26048399 - 26048489
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||| |||||||| ||||||||| || ||  |||| |||||||||||| |||||| |  |||| |||||||||||||||    
T  26048399 catatagtttaaggacaattttgtttgatttaaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggaacaaaagtgtaattaa 26048489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 9394184 - 9394272
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||| ||||||||||||| |||||| ||  |||||||| ||||| || ||||||||  | ||||||||||||||||||    
T  9394184 atatagtttagggacggttttgttcgatttgaaaaaggtaggaccatttttgtgagctggtcaaaatgcga-gaccaaaagtgtaattaa 9394272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 11973862 - 11973945
Alignment:
Q  27 tttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||| |||||||||||||| |||||||| || || ||||| ||||||  |||| ||||||||  |||||||||| |||||||||    
T  11973862 tttagggacgattttgttcaatttaaaagaggtagaaccaatttcgtacgttggtcaaaatgcaaggaccaaaaatgtaattaa 11973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 35579349 - 35579428
Alignment:
Q  31 aggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| ||||||| ||||| ||| ||  |||| |||||||||||| |||||||||||  |||| |||||||||||||||    
T  35579349 aggacggttttgtttgatttgaaagaggcataatcattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaa 35579428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 40669689 - 40669751
Alignment:
Q  48 tttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||  ||| | ||||||||||||||| ||||||||| |||| |||||||||||||||    
T  40669689 tttaaaaaaagtatgatcattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaa 40669751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 39136991 - 39137076
Alignment:
Q  25 agtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| ||||||||||||||||||||||| ||  |  ||||||||||||||  | |||||||   |||| |||||||||||||||    
T  39136991 agtttatggacgattttgttcgatttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaa 39137076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 9393818 - 9393739
Alignment:
Q  31 aggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| ||||||||||||| ||| ||  |  || ||||||||||| |||||||||||  |||| |||||||||||||||    
T  9393818 aggacggttttgttcgatttgaaagaggcaagacaattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaa 9393739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 49064124 - 49064037
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||| |||||||||| |||| ||| ||  |  |||||||||||||| || |||||||   ||||||||||||||||||||    
T  49064124 atagtttatggaagattttgttctatttgaaagaggcaataccattttcgtgagctggtcaaaatacgaggaccaaaagtgtaattaa 49064037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 14311408 - 14311318
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||||||| ||| |||||||| || |||||||| |||  ||||||| | ||||||  || ||||||| | |||||||    
T  14311408 catatagtttagggacgattttattcaatttaaaagaggtataaccaattttatgagttggttaaaatgcaagtaccaaaaatataattaa 14311318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 45815431 - 45815347
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||| ||||||||||||| ||| ||  || |||||||||   || || ||||||||  ||||||||||||||||||||    
T  45815431 atagtttagggacggttttgttcgatttgaaagaggcatgaccattttc---agctggtcaaaatgcaaggaccaaaagtgtaattaa 45815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 34594630 - 34594586
Alignment:
Q  66 attttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||  ||||||||  ||||||||||||||||||||    
T  34594630 attttcgtgagttagtcaaaatgcgaggaccaaaagtgtaattaa 34594586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 7e-37; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 24640638 - 24640728
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||    
T  24640638 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtataattaa 24640728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 5114561 - 5114471
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  5114561 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaa 5114471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 25472466 - 25472556
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||    
T  25472466 catatagtttaaggacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 25472556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 30251148 - 30251235
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||| |||||| |||||||||||||||    
T  30251148 atagtttaaggacgattttgttcgatttaaaaaagatatgacaatttttgtgagttggtcaaaatagtaggatcaaaagtgtaattaa 30251235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 25468942 - 25468852
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  25468942 catatagtttagggacgattttgttcgatttaaaagagatatgaccaatttcgtgagttggtcaaaatgtaaggaccaaaagtgtaattaa 25468852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 31573814 - 31573723
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaaga-tataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||| ||||||||||||||||||||||| | ||  || |||||||||||||| |||||||||||||||||||||| |||||||    
T  31573814 catatagtttaagaacgattttgttcgatttaaaaaaaaataggactattttcgtgagttggtcaaaatggtaggaccaaaagtataattaa 31573723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 31574178 - 31574268
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||| || | |||||||||||| ||||||||  ||||||||||||||||||||    
T  31574178 catatagtttagggacgattttgttcgatttaaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 31574268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 31073595 - 31073685
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||| |||||||||||||||||| || ||| |||| ||||||||| || ||||||||  ||||||||||||||||||||    
T  31073595 catatagtttagggacaattttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 31073685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 5120922 - 5121012
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |  | |||||||||||| ||||||||  ||||||||||||||||||||    
T  5120922 catatagtttagggacgattttgttcgatttaaaagaggtaggaataatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 5121012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 29891533 - 29891627
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaa-aaagatataa---ccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||| ||||||| ||| | | ||   ||||||||  |||||| ||||||||||||||||||||||||||||||    
T  29891533 catatagtttaaggacgattttgttcaatttaaataaataaaaaaggaccattttcacgagttggtcaaaatggtaggaccaaaagtgtaattaa 29891627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 31073222 - 31073146
Alignment:
Q  34 acgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||  ||||||||| || |||| |||||||   ||||||||||||||||||||    
T  31073222 acgattttgttcgatttaaaaaagataggaccattttcatgtgttggtcaaaattaaaggaccaaaagtgtaattaa 31073146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 35163640 - 35163730
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||| ||||| ||| ||  | ||||||||||||||| || ||||||||   |||||||||||||||||||    
T  35163640 catatagtttagggacgattttgtttgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaa 35163730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 32836449 - 32836539
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||| |||||||| ||| ||||||||||||| ||| ||  || |||||||||||||| || ||||||||  ||||| ||||||||||||||    
T  32836449 catacagtttaagaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggactaaaagtgtaattaa 32836539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 28636385 - 28636295
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| | ||||||||||||||||||||| |  ||  |||| |||||||||||| |||||||   | |||||||| |||||||||    
T  28636385 catatagtttaggaacgattttgttcgatttaaaagaagtaagaccaatttcgtgagttggtcaaaatacaatgaccaaaaatgtaattaa 28636295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 29891173 - 29891083
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||| ||||||||| ||||||| || ||| | || |||||| ||||  ||||||||  |||| |||||||||||||||    
T  29891173 catatagtttagggacgcttttgttcggtttaaaagaggtatgatcaatttcgtaagttagtcaaaatgtaaggaacaaaagtgtaattaa 29891083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 22534220 - 22534267
Alignment:
Q  63 accattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||| |||||||   ||||||||||||||||||||    
T  22534220 accattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaa 22534267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 33095804 - 33095717
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||| ||||||||||||| ||| || |   |||||||||| ||| |||| ||||||  ||||||||||||| ||||||    
T  33095804 atagtttagggacggttttgttcgatttgaaagaggtgagaccattttcgcgagctgataaaaatgcgaggaccaaaagtgcaattaa 33095717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 35163266 - 35163187
Alignment:
Q  31 aggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| ||||||||||||| ||| ||| |  |||||||| ||||| || ||||||||  ||||| ||||||||||||||    
T  35163266 aggacggttttgttcgatttgaaagagacaagaccatttttgtgagctggtcaaaatgcgaggactaaaagtgtaattaa 35163187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 31242878 - 31242809
Alignment:
Q  41 tgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||  |  | ||||||||||||||| ||||||||  |||  |||||||||||||||    
T  31242878 tgttcgatttaaaaaaggcaggatcattttcgtgagttggtcaaaatgcgagggtcaaaagtgtaattaa 31242809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 7e-37; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 21034328 - 21034238
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21034328 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 21034238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 28465534 - 28465624
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28465534 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 28465624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 34789475 - 34789385
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34789475 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 34789385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 54441022 - 54441112
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||    
T  54441022 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagctgatcaaaatggtaggaccaaaagtgtaattaa 54441112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 12593117 - 12593027
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  12593117 catatagtttaaggacgattttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgtaattaa 12593027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 26974376 - 26974286
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||||||    
T  26974376 catatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagtttgttaaaatggtaggaccaaaagtgtaattaa 26974286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 56077777 - 56077867
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  56077777 catatagtttaaggacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaa 56077867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 6616765 - 6616675
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  6616765 catatagtttaaggacgattttgttcgatttaaaaaaaataagaccattttcgtgagttgatcaaaatgatagaaccaaaagtgtaattaa 6616675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 24851407 - 24851319
Alignment:
Q  22 tatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||    
T  24851407 tatagtttaaggacgattttgttcaatttaaaaaagatagcaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 24851319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 14440281 - 14440371
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  14440281 catatagtttaaggatgattttgttcgatttaaaaaagataggaccattttcgtaagttggtcaaaatggtaggaccaaaagtataattaa 14440371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 33777725 - 33777635
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||| ||||| |||| | ||||||||||||||| |||||||||||||| |||||||||||||||    
T  33777725 catatagtttaaggacgattttgttcgattttaaaaaaatatgatcattttcgtgagttggtcaaaatggtaggaacaaaagtgtaattaa 33777635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 41114250 - 41114160
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  41114250 catatagtttaaggacgtttttgttcgatttaaaaaagataggacccttttcgtgagttggtcaaaatggtaggaccaaaagtgtcattaa 41114160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 45839003 - 45839092
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  45839003 catatagtttaaggacgattttgttcgatttaaaaaagataggacca-tttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 45839092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 16214949 - 16215038
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||| ||| ||||||||||||||| | ||||||||| |||||||||||||| ||||||||||||| |||||||    
T  16214949 atatagtttaaggacgattttattcaatttaaaaaagatatgatcattttcgtaagttgatcaaaatgataggaccaaaagtataattaa 16215038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 28166096 - 28166007
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||||||| | |||||||    
T  28166096 atatagtttaaggacaattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaaatttaattaa 28166007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 34807209 - 34807119
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||| ||||||||||||||||||||||| || ||| |||| |||||||||||||||||||||  ||||||||||||||||||||    
T  34807209 catatactttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 34807119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 46736748 - 46736658
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||| ||||||| |||| ||||||||| |||||||    
T  46736748 catatagtttaaggacaattttgttcgatttaaaaaaaataagaccattttcgtgagttggtcaaaatagtagaaccaaaagtataattaa 46736658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 1397683 - 1397598
Alignment:
Q  25 agtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||  ||||||| |||||||||| ||| |||||||||||||||    
T  1397683 agtttaaggacgattttgttcgatttaaaaaagataggaccatttttatgagttggtcaaaatggttggatcaaaagtgtaattaa 1397598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 41608870 - 41608958
Alignment:
Q  22 tatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||| ||||||||| || ||  |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  41608870 tatagtttaagaacgattttgttggatttaaaagaggtaggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 41608958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 33689922 - 33689832
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||| || ||  |||| ||| |||||||| ||||||||  ||||||||||||||||||||    
T  33689922 catatagtttaaggacgattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 33689832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 34807592 - 34807682
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||||||||  || |||||||| | |||||||    
T  34807592 catatagtttaaggacgattttgttcgaattaaaaaagatagaataattttcgtgagttgatcaaaataataagaccaaaaatataattaa 34807682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 35643648 - 35643558
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||| ||| |||| |||||||||  ||||||||||||||||| ||||||||||| |||||| ||||| |||||    
T  35643648 catatagtttaaggacgattttattcaattttaaaaagataggaccattttcgtgagttggtcaaaatggtaagaccaatagtgtgattaa 35643558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 46737108 - 46737198
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  46737108 catatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 46737198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 12593477 - 12593566
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||  |||||||||||||||||||||| || ||| |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  12593477 atatagtttacagacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 12593566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 41608465 - 41608377
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||  ||||||||||||||||||||||| || ||| |||| |||| ||||||||||||||||  ||||||||||||||||||||    
T  41608465 catatagttt--ggacgattttgttcgatttaaaagaggtatgaccaatttcatgagttgatcaaaatgcaaggaccaaaagtgtaattaa 41608377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 54440661 - 54440574
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||||||||||| || ||  |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  54440661 atagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 54440574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 14439921 - 14439831
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||||||||||  ||||||||||| ||| |||| |||||||||||| ||||||||  |||||||||| |||||||||    
T  14439921 catatagtttagggacgattttgtttaatttaaaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 19529147 - 19529237
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||| ||||||||||||| |||||||| ||||| || ||||||  | ||||| |||||||||||||| |||||||||||||||    
T  19529147 catatagtttaaagacgattttgttcaatttaaaagagatagaatcatttttataagttggtcaaaatggtaggagcaaaagtgtaattaa 19529237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 28465174 - 28465084
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||| || ||  | || |||||| ||||| ||||||||| ||||| ||||||||||||||    
T  28465174 catatagtttaaggacgattttgttcgatttaaaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgtaattaa 28465084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 34789836 - 34789926
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||| |||||||||||||||||| || ||  |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  34789836 catatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 34789926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 21034691 - 21034780
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| | ||||||||||||||||||||||| |||||  |||| |||||||||||| ||||||||  |||||||||| |||||||||    
T  21034691 atatagttcagggacgattttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaa 21034780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 19528962 - 19528872
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||||||||| |||||||||||| || ||  |||| |||||||| ||| ||||||||  ||||||||||||||||||||    
T  19528962 catatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaa 19528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 24851919 - 24852009
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  | || |||||||||||| ||||||||  |||||||||||| |||||||    
T  24851919 catatagtttagggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtataattaa 24852009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 36168422 - 36168332
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||||||||||||||||||||||||||| || ||  |||| ||||||| |||| ||||||||  |||| |||||||||||||||    
T  36168422 catataatttaaggacgattttgttcgatttaaaagaggtaagaccaatttcgtgggttggtcaaaatgcaaggagcaaaagtgtaattaa 36168332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 36168784 - 36168874
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||||| |  ||||||||| |||||||||| |||  | ||||||||||||||| |||||||||||||||||| |||||||||||    
T  36168784 catataatttaagaataattttgttctatttaaaaaaaataggatcattttcgtgagttggtcaaaatggtaggaccaagagtgtaattaa 36168874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 55677411 - 55677501
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||  |||||||||||||||||||||| || ||  |||| |||||||||||| |||||||   ||||||||||||||||||||    
T  55677411 catatagtttagagacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaa 55677501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 17504412 - 17504480
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatg 88  Q
    ||||||||||||||||| ||||||||||||||||| |||||  |||||||||||||| || ||||||||    
T  17504412 catatagtttaaggacggttttgttcgatttaaaagagataggaccattttcgtgagctgttcaaaatg 17504480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 35193401 - 35193322
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaa 99  Q
    ||||||||||| ||||||||||||||||||| ||| || ||  |||||||||||||| |||||||||||  |||||||||    
T  35193401 catatagtttagggacgattttgttcgatttgaaagaggtaggaccattttcgtgagctgatcaaaatgcgaggaccaaa 35193322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 33778065 - 33778155
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||| | ||||||||||| ||||||||| || || || ||||||||||||||  |||||||||||| || ||||||||||||||    
T  33778065 catataatttaggaacgattttgtttgatttaaaagaggtagaatcattttcgtgagttagtcaaaatggtagaacgaaaagtgtaattaa 33778155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 45838640 - 45838554
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaa 106  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| || ||||||||| |||||||   ||||||||||||||||    
T  45838640 catatagtttagggacgattttgttcgatttaaaagaggtaggaccaattacgtgagttggtcaaaatacaaggaccaaaagtgtaa 45838554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 229615 - 229702
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||| ||||| ||| ||  |  |||||||||||||| || ||||||||  | ||||||||||||||||||    
T  229615 atagtttaaggacgattttgtttgatttgaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 23986610 - 23986523
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||  ||||||||||||| ||| ||| || |||||||||||||| || ||||||||  ||||||||||||| ||||||    
T  23986610 atagtttagggacagttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgaaattaa 23986523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 26974698 - 26974788
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| |||| |||||||||||||||||| || ||  |||| |||||||| ||  ||||||||  |||||||||| |||||||||    
T  26974698 catatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgaattattcaaaatgcaaggaccaaaaatgtaattaa 26974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 30597973 - 30598059
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaat 107  Q
    ||||| |||| ||||||||||||||||||||||| ||| | ||||| || ||||||||| ||||||    |||||||||||||||||    
T  30597973 atataatttagggacgattttgttcgatttaaaagagacagaaccaattccgtgagttggtcaaaacacgaggaccaaaagtgtaat 30598059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 229251 - 229164
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||| |||| ||| ||  |  |||||||||| ||| || |||||||   ||||||||||||||||||||    
T  229251 atagtttaaggacgattttgttcaatttgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaa 229164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 6617116 - 6617205
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| |||||||||| |||||||||||| || ||  |||| |||||||||||  ||||||||  || | ||||| |||||||||    
T  6617116 atatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtcaaaatgcaagtagcaaaaatgtaattaa 6617205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 35193798 - 35193845
Alignment:
Q  63 accattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||| | |||||||||  ||||||||||||||||||||    
T  35193798 accattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaa 35193845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 35644042 - 35644105
Alignment:
Q  47 atttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| || ||| |||  |||||||||||| ||||||||  ||||||||||||||||||||    
T  35644042 atttaaaagaggtatgacctatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 35644105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 40160554 - 40160633
Alignment:
Q  31 aggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||||||| |||| ||| ||  || || |||||||||||||| ||||||||  |||||||||| |||||||||    
T  40160554 aggacggttttgttcaatttgaaagaggcatgactattttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 40160633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 51309961 - 51310048
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||  ||||||||||||| ||| ||  || |||||||||||||| || | ||||||  ||||||||||||| ||||||    
T  51309961 atagtttagggactgttttgttcgatttgaaagaggcatgaccattttcgtgagctggtaaaaatgcgaggaccaaaagtgcaattaa 51310048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 40160187 - 40160097
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||| ||||||||||||||||| ||  || || ||||||||||| || | ||||||   ||| ||||| |||||||||    
T  40160187 catatagtttagggacggttttgttcgatttaaaagaggcatgactattttcgtgagctggttaaaatgcggggatcaaaaatgtaattaa 40160097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 44219448 - 44219378
Alignment:
Q  40 ttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||||||||||| |  |||| |||||||||||| | |||||   ||||||||||||||||||||    
T  44219448 ttgttcaatttaaaaaagagaggaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaa 44219378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 10795777 - 10795854
Alignment:
Q  33 gacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||| ||| ||| |  |||| ||||||||| || ||||||||   ||| |||||||||||||||    
T  10795777 gacgattttgttcgatttgaaagagagaggaccaatttcgtgagctgttcaaaatgcggggatcaaaagtgtaattaa 10795854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 37336620 - 37336681
Alignment:
Q  39 tttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaa 100  Q
    |||||||||||| ||||||| ||||||  |||||||||||| | ||||||  ||||||||||    
T  37336620 tttgttcgatttgaaaaagagataacctatttcgtgagttggttaaaatgcgaggaccaaaa 37336681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 24335836 - 24335764
Alignment:
Q  38 ttttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||| ||| ||  || |||||||||||||| || ||||||||  |||| | |||||||||||||    
T  24335836 ttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggatcgaaagtgtaattaa 24335764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 7e-37; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 38008404 - 38008494
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38008404 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 38008494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 5560143 - 5560054
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5560143 atatagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 5560054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 4356209 - 4356299
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||||    
T  4356209 catatagtttaaggacgattttgttcgatttaaaaaagatatgaccattatcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 4356299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 11539730 - 11539640
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11539730 catatagtttaaggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 11539640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 13315586 - 13315496
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  13315586 catatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcatgagttggtcaaaatggtaggacaaaaagtgtaattaa 13315496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 20127829 - 20127739
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  20127829 catatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaa 20127739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 16953028 - 16952938
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||||||||||||||| |||||||    
T  16953028 catatagtttaaggacgattttgttcgatttaaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaa 16952938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 17060999 - 17060909
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||||||||||||||| |||||||    
T  17060999 catatagtttaaggacgattttgttcgatttaaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaa 17060909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 33921069 - 33921155
Alignment:
Q  24 tagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33921069 tagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 33921155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 43160464 - 43160554
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||  |||||||||||||||| |||||||||||||    
T  43160464 catatagtttaaggacgatttagttcgatttaaaaaagataggaccattttcgtgagtttgtcaaaatggtaggacctaaagtgtaattaa 43160554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 63050 - 62960
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  63050 catatagtttaaggacgattttgttcgattttaaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaa 62960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 4809332 - 4809422
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||| ||||||| |||||||||| |||  ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  4809332 catatagtttaaggacgactttgttcaatttaaaaaacataggaccattttcgtgagttagtcaaaatggtaggaccaaaagtgtaattaa 4809422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 6949544 - 6949454
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||  |||||||| ||||||||||| |||||||||    
T  6949544 catatagttaaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaa 6949454  T

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Target: chr2; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 15551136 - 15551218
Alignment:
Q  28 ttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||||| |||| |||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  15551136 ttaaggacgattttgttcgatttaaaaaatatatgaccatttttgtgagttggtcaaaatggtagggccaaaagtgtaattaa 15551218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 649801 - 649880
Alignment:
Q  31 aggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||| |||  ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  649801 aggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 649880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 42192333 - 42192243
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  ||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  42192333 catatagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 42192243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 44219737 - 44219647
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| ||||||||| ||||||||||||||||||||| ||  | |||||| |||||||||||||||||| ||||||||||||||||||||    
T  44219737 catataatttaaggacaattttgttcgatttaaaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaa 44219647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 44220098 - 44220188
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||| ||||||||  ||||| ||||||||||||||    
T  44220098 catatagtttagggacgattttgtttgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaa 44220188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 16175803 - 16175892
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaatta 109  Q
    ||||||||||||||||||||||||||||||||||| || ||| |||| |||||||||||| | ||||||  |||||||||||||||||||    
T  16175803 catatagtttaaggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtaaaaatgtaaggaccaaaagtgtaatta 16175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 43160100 - 43160011
Alignment:
Q  22 tatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaat 111  Q
    ||||||||| ||||||||||||||||||||||| || ||| |||| |||||||||||||||||||||  |||||||||| ||||||||||    
T  43160100 tatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaat 43160011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 4355848 - 4355758
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||| |||| |||||||||| | ||||||||  ||||||||||||||||||||    
T  4355848 catatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaa 4355758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 38008043 - 38007953
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  38008043 catatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 38007953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 42192700 - 42192786
Alignment:
Q  24 tagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||| ||||||||||||||||||||||| || ||  ||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  42192700 tagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 42192786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 32418600 - 32418689
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||||||||||||||||||| || || || || |||||||| ||| |||||||| ||||||||||||| |||||||    
T  32418600 atatagtttaaggacgattttgttcgatttaaaagaggtagaatcaatttcgtgaattggtcaaaatgataggaccaaaagtataattaa 32418689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 9330248 - 9330338
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||  ||||||||||||||||||||||| || ||| || | |||||||||||| ||||||||  ||||||||||||||||||||    
T  9330248 catatagtttggggacgattttgttcgatttaaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9330338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 11540091 - 11540181
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  ||||||||||||||||| ||||||||  | |||||||||| |||||||    
T  11540091 catatagtttatggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaagtataattaa 11540181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 20128190 - 20128280
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||| ||||||||| || ||  |||| |||||||||||| | ||||||  ||||||||||||||||||||    
T  20128190 catatagtttaaggacgattttgtttgatttaaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaa 20128280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 33920705 - 33920615
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||| | || |||||||||||| ||||||||  |||||||||| |||||||||    
T  33920705 catatagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 33920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 13399874 - 13399962
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||| |||||||||||||||||| | ||| | |||||||||||||||| ||||||||||||||| |||| || ||||||    
T  13399874 atatagtttaaggacaattttgttcgatttaaaagaaataga-ccattttcgtgagttggtcaaaatggtaggactaaaattgcaattaa 13399962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 24140128 - 24140217
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||||||||||| |||||||||||| ||  ||||||||||||||||| |||| |||  |||| |||||||||||||||    
T  24140128 atatagtttatggacgattttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaa 24140217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 9329892 - 9329833
Alignment:
Q  52 aaaaagatataaccattttcgtgagtt-gatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  9329892 aaaaagatataaccattttcgtgagttagatcaaaatgataggaccaaaagtgtaattaa 9329833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 63417 - 63507
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||| ||||||||| |||||  ||||||||||||||||| |||||||   |||||||||| | |||||||    
T  63417 catatagtttagggacgattttgtttgatttaaaagagataagaccattttcgtgagttggtcaaaatacaaggaccaaaaatataattaa 63507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 649620 - 649530
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| |||||| ||||| |||| |||  ||||||||||||||||||||    
T  649620 catatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaagatgcaaggaccaaaagtgtaattaa 649530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 15550766 - 15550676
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  |||| |||||||||||| ||| ||||  |||| |||||||||||||||    
T  15550766 catatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcagaatgcaaggatcaaaagtgtaattaa 15550676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 31797230 - 31797320
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||| ||||||||||||| ||| ||  || |||||||||||||| || ||||||||  ||||||||||||||||||||    
T  31797230 catatagtttagggacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaa 31797320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 6949898 - 6949987
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| |||||||||||||| |||||||| |  ||  |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  6949898 atatagtttagggacgattttgttctatttaaaagatgtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 6949987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 25336054 - 25336143
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||| |||| ||||||||||||||||||||||| |  ||  |||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  25336054 atataatttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 25336143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 43216163 - 43216252
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||||||||||||||||||||| || ||  |||| |||||||||||| |||||| |  ||||| ||||||||||||||    
T  43216163 atatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaa 43216252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 9329974 - 9329915
Alignment:
Q  51 aaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||  |||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  9329974 aaaaaagataggaccatttttgtgagttggtcaaaattgtaggaccaaaagtgtaattaa 9329915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 20495283 - 20495196
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||| ||||||||| ||  || | ||||||||||||||| ||||||||  || |||||||||| ||||||    
T  20495283 atagtttagggacgattttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaatgcgagaaccaaaagtgaaattaa 20495196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 28143485 - 28143572
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||||||||||||||||| ||| ||  |  |||||||||||||| || ||||||||  ||||||||||||| ||||||    
T  28143485 atagtttagggacgattttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaa 28143572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 4808972 - 4808882
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||||||||||||||||||||||| || ||  | || |||||||||||| ||||||||  || || |||| |||||||||    
T  4808972 catatagtttatggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaagaactaaaaatgtaattaa 4808882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 16953387 - 16953477
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| |||| ||||  ||||||||||||||||| || ||  |||| |||| ||||||| ||||||||  ||||||||||||||||||||    
T  16953387 catatactttagggacatttttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaa 16953477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 32418249 - 32418162
Alignment:
Q  21 atatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||||||||||||||||  ||| || ||  |||| |||||||||||| ||||||||  ||||||| ||||||||||||    
T  32418249 atatagtttagggacgattttgttcgatt--aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaa 32418162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 14942306 - 14942389
Alignment:
Q  27 tttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||| |||| |||||||||||||| ||| ||| |  |||||||||||||| || ||||||||  | ||||||||||||||||||    
T  14942306 tttatggacaattttgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 14942389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 13399515 - 13399460
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtga 75  Q
    ||||||||||| |||||||||||||| |||||||| || ||| |||| ||||||||    
T  13399515 catatagtttagggacgattttgttccatttaaaagaggtatgaccaatttcgtga 13399460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 22445724 - 22445642
Alignment:
Q  27 tttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||| ||||||||||||||| || | ||| |||| |||  | ||||||||||||| | | ||||||||||||||||||    
T  22445724 tttaaggacggttttgttcgatttaataatggtatgaccaattttataagttgatcaaaat-gcaagaccaaaagtgtaattaa 22445642  T

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Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 5035953 - 5035903
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgt 73  Q
    |||||||| ||||| ||||||||||||||||||||| |  |||||||||||    
T  5035953 atagtttagggacggttttgttcgatttaaaaaagacaggaccattttcgt 5035903  T

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Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 2190536 - 2190612
Alignment:
Q  27 tttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtg 103  Q
    |||| ||||||||||||||||||| ||||||  |  |||| ||||||||| || ||||||||  | |||||||||||    
T  2190536 tttagggacgattttgttcgatttgaaaaaggcaggaccaatttcgtgagctggtcaaaatgcgatgaccaaaagtg 2190612  T

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Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 3824179 - 3824251
Alignment:
Q  38 ttttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||||||||| |  || |||| |||||||||||| | ||||||  | |||||||||| |||||||    
T  3824179 ttttgttcgatttaaaaagggcatgaccaatttcgtgagttggttaaaatgcgatgaccaaaagtataattaa 3824251  T

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Target: scaffold0712 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 6485 - 6395
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  6485 catataatttaaggacgattttgttcgatttaaaaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaa 6395  T

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Target: scaffold0712; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 6853 - 6939
Alignment:
Q  24 tagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||| | ||||||||||||||||||||| |  ||  |||| |||||| | ||| ||||||||  ||||||||||| ||||||||    
T  6853 tagtttaggtacgattttgttcgatttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6939  T

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Target: scaffold0709 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 6503 - 6413
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  6503 catataatttaaggacgattttgttcgatttaaaaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaa 6413  T

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Target: scaffold0709; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 6871 - 6957
Alignment:
Q  24 tagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||| | ||||||||||||||||||||| |  ||  |||| |||||| | ||| ||||||||  ||||||||||| ||||||||    
T  6871 tagtttaggtacgattttgttcgatttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6957  T

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Target: scaffold0097 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 46721 - 46811
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||||||| |||||||||||||||||||||| | |||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46721 catatagtttaaagacgattttgttcgatttaaaatatataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 46811  T

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Target: scaffold0097; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 46359 - 46269
Alignment:
Q  20 catatagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    ||||||||||| ||| ||||||||||||||||||| || || |||||||||||| ||||| ||||||||  ||||||||||||| ||||||    
T  46359 catatagtttagggatgattttgttcgatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaagtgcaattaa 46269  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 205823 - 205910
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||| ||||||||||||| ||| ||  |  ||||||||||||||||| ||||||||  ||||| ||||||||||||||    
T  205823 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaa 205910  T

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Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 210793 - 210880
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 110  Q
    |||||||| ||||| ||||||||||||| ||| ||  |  ||||||||| ||||||| ||||||||  ||||||||||||||||||||    
T  210793 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaa 210880  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 159337 - 159390
Alignment:
Q  23 atagtttaaggacgattttgttcgatttaaaaaagatataaccattttcgtgag 76  Q
    |||||||| | ||||||||||||||||| ||| ||| || ||||||||||||||    
T  159337 atagtttatgaacgattttgttcgatttgaaagagacatgaccattttcgtgag 159390  T

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