View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8895_low_27 (Length: 257)
Name: NF8895_low_27
Description: NF8895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8895_low_27 |
 | |
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| [»] scaffold0266 (1 HSPs) |
| | |
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| [»] scaffold0225 (1 HSPs) |
| | |
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| [»] scaffold0008 (2 HSPs) |
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| [»] scaffold1140 (1 HSPs) |
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| [»] scaffold0467 (2 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
| | |
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| [»] scaffold0462 (1 HSPs) |
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| [»] scaffold0615 (1 HSPs) |
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| [»] scaffold0302 (1 HSPs) |
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| [»] scaffold0218 (1 HSPs) |
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| [»] scaffold0610 (1 HSPs) |
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| [»] scaffold0673 (1 HSPs) |
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| [»] scaffold0120 (1 HSPs) |
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| [»] scaffold0011 (2 HSPs) |
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| [»] scaffold0009 (1 HSPs) |
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| [»] scaffold0021 (2 HSPs) |
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| [»] scaffold0465 (2 HSPs) |
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| [»] scaffold0162 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 21847370 - 21847117
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
21847370 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacaa |
21847271 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
21847270 |
caccaccttccaactcaagtctgcccttggcattggtccaccagtactctgcttcctcagctagcatatgagtcgccaatctgaccttctggtcatcacc |
21847171 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
21847170 |
agtaaccatagcttggaaaatccgctccattccctgcacccaagtctgtgctcc |
21847117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 20649388 - 20649135
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||| ||||||||||| | |
|
|
| T |
20649388 |
ccttgttttaaattcagaaactcaacctccttcttggtcctcaagtcttcagggaaacacttcctcaagaattcaactttgaacttcgcccaggtcacaa |
20649289 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| |||||||||| || || |||||||| |||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
20649288 |
catcacctcccaactcaagtcttcctttggcattagtccacaagtgctctgcttcctcagcaagcatatgagtcgccagtctgaccttctggtcatctcc |
20649189 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||| |||||||||| |||| ||||||||| |||| |||||||||||||||||| |
|
|
| T |
20649188 |
cgtcaccatagctcgaaaaacccgctccatgccctgcacccaagtctgtgctcc |
20649135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 16415835 - 16415934
Alignment:
| Q |
3 |
ttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcaccaca |
102 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
16415835 |
ttgtttcagattcagaaactcaatctccttcttggtcctcaagtcttcggggaaatacttcctcaagaattcaaccttgaacttagccgaggtcaccaca |
16415934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 254
Target Start/End: Complemental strand, 21193573 - 21193332
Alignment:
| Q |
13 |
ttcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcaccacaccaccttcca |
112 |
Q |
| |
|
||||||||| | ||||||||| |||||||||| ||||| |||||||||||||||||||| ||| | |||||||| ||||| ||||| || | || | | |
|
|
| T |
21193573 |
ttcagaaacgctacctccttcctggtcctcaaatcttcagggaaatacttcctcaagaactcagctttgaacttcgcccaagtcacgacttccccaacaa |
21193474 |
T |
|
| Q |
113 |
actcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcccgtaaccatagc |
212 |
Q |
| |
|
|||||| || |||||||||||||||||||| || || || |||||||| ||||||||||| |||||||||||||||||||| | ||| |||||||| |
|
|
| T |
21193473 |
tctcaagtcttcccttggcattggtccaccaatattcggcctcctcagcaagcatatgagtcgtcaatctgaccttctggtcatcactcgtcaccatagc |
21193374 |
T |
|
| Q |
213 |
tcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|| || |||| |||||| |||| ||||||||| || ||||| |
|
|
| T |
21193373 |
acaaaatatcctctccatgccctgcacccaagtttgagctcc |
21193332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 1660578 - 1660325
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1660578 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
1660479 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||| |
|
|
| T |
1660478 |
catcaccgcccaactcaagcctgcccttggcattgatccaccagtactctgcttcctcagcaaacatatgagtcgctagtctgaccttctggtcatctcc |
1660379 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
1660378 |
cgtaaccatagctcggaaaatccgctccattccctgcacccaagtctgtgctcc |
1660325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 17786742 - 17786996
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||| ||||||||| |
|
|
| T |
17786742 |
ccttgtttcagattcagaaactcaatctccttcttggtcctcaagtcttcagggaaatatttcctcaagaattcgaccttgaacttagcctaggtcacca |
17786841 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctga-ccttctggtcatatc |
199 |
Q |
| |
|
|| ||||| ||| |||||| || || |||||||| |||||||||| | || ||||||||||| |||||||||||| | ||||| |||||||||||| || |
|
|
| T |
17786842 |
catcacctcccatctcaagtcttcctttggcattagtccaccagtgcccttcttcctcagctagcatatgagtcgctagtctgagccttctggtcatttc |
17786941 |
T |
|
| Q |
200 |
ccgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||| |
|
|
| T |
17786942 |
ccgtaaccatagctcggaaaatccgttccataccctgcacccaagtctgtgctcc |
17786996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 18421110 - 18421363
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||||| |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||| | |
|
|
| T |
18421110 |
ccttgttatagattcagaaactcaatctccttgttggtcctcaagtcttcagggaaatacttcctcaagaattcaacctggaacttagcccaggtcacaa |
18421209 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| ||| |||||| || || |||||||| |||||||||| ||||||||||| ||| |||||||||||| | ||||||||||||||||| | |
|
|
| T |
18421210 |
catcacctcccatctcaagtcttcctttggcattagtccaccagtgctctgcttccttagcaagcatatgagtcgctagtctgaccttctggtcatccct |
18421309 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||| ||||||| || |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
18421310 |
cgtcaccatagatcggaaaatccgctccattccctgcacccaagtctgtgctcc |
18421363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 16103851 - 16104104
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||||||| ||||||||||||| |
|
|
| T |
16103851 |
ccttgattcaaattcagaaactcaacctccttcttagtcctcaagtcttcagggaaatacttcctcaagaattcagctttgaacttagcccaggtcacca |
16103950 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| ||| ||||| || || |||||||| |||||||||| ||| ||||||||||| || ||||||||| | ||||||||||||||||| ||| |
|
|
| T |
16103951 |
catcacctcccatttcaagtcttcctttggcattagtccaccagtgctccgcttcctcagcaagcacatgagtcgctagtctgaccttctggtcatctcc |
16104050 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||| ||||||||| ||||||||||||||| |||| ||||||||| ||| |||| |
|
|
| T |
16104051 |
cgtcaccatagcttggaaaatccgctccataccctgcacccaagtttgtactcc |
16104104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 254
Target Start/End: Complemental strand, 21412255 - 21412008
Alignment:
| Q |
7 |
ttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcaccacaccac |
106 |
Q |
| |
|
||||| |||||||| || ||||||||| | || ||||| ||||| |||||||||||||| |||||||| | |||||||| ||||||||||| || | | |
|
|
| T |
21412255 |
ttcaggttcagaaattccacctccttcctagttctcaaatcttcagggaaatacttccttaagaattctgctttgaacttcgcccaggtcacaacttctc |
21412156 |
T |
|
| Q |
107 |
cttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcccgtaac |
206 |
Q |
| |
|
|| ||| ||||| || || ||| |||| |||||||||||||| || |||||||| ||||||||||||||||||| |||| ||||||| |||||| || |
|
|
| T |
21412155 |
ctcccatctcaaatcttcctttgacattagtccaccagtactcagcctcctcagcaagcatatgagtcgccaatctggccttttggtcatctcccgtcac |
21412056 |
T |
|
| Q |
207 |
catagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|||||| | || ||||||||||| |||| |||||||||||| ||||| |
|
|
| T |
21412055 |
catagcacgaaatatccgctccatgccctgcacccaagtctgagctcc |
21412008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 22365081 - 22364852
Alignment:
| Q |
19 |
aactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcaccacaccaccttccaactcaa |
118 |
Q |
| |
|
||||| || |||||| |||||||||| |||| |||||||||||||||||||| ||||| |||||||| ||||| ||||| || | || | | ||||| |
|
|
| T |
22365081 |
aactctacttccttcctggtcctcaaaccttcagggaaatacttcctcaagaactcaactttgaactttgcccaagtcacaacttctccaccaatctcaa |
22364982 |
T |
|
| Q |
119 |
gcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcccgtaaccatagctcagaa |
218 |
Q |
| |
|
| || ||||| | ||| |||||||| ||||| || |||||||| ||| ||||| |||| |||||||||| ||||| | || |||||||| | ||| |
|
|
| T |
22364981 |
gtcttcccttagaattagtccaccaatactcggcctcctcagcaagcatgtgagtaaccaacctgaccttctagtcatcacttgtcaccatagcacggaa |
22364882 |
T |
|
| Q |
219 |
aatccgctccattcccttcacccaagtctg |
248 |
Q |
| |
|
|||| ||| || |||| |||||||||||| |
|
|
| T |
22364881 |
tatcctctctatgccctgcacccaagtctg |
22364852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 16646704 - 16646509
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||| |||| |||||| ||||| || |||||| | |||||||| || || || || ||||||||||| || ||| ||||||| | | ||| ||||| | |
|
|
| T |
16646704 |
ccttgcttcaaattcaggaactccacttccttcctagtcctcaaatcctctggaaagtacttcctcaaaaactcagtcttgaacgttgtccaagtcacaa |
16646605 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcat |
196 |
Q |
| |
|
| || || || | |||||| || ||||| |||||||||||||| ||||| || |||||||| ||| ||||| ||||| || |||||||| |||| |
|
|
| T |
16646604 |
cccctccatcaatctcaagtcttcccttagcattggtccaccaatactcagcctcctcagcaagcatgtgagtagccaacctcaccttctgatcat |
16646509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 15000336 - 15000588
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15000336 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaa-tacttcctcaagaattcaaccttgaacttggcccaggtcacca |
15000434 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| ||||| ||| |
|
|
| T |
15000435 |
catcaccccccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagctaacatatgagtcgctagtctgaccttctagtcatctcc |
15000534 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
15000535 |
cgtaaccatagctcggaaaatccgctccattccctgcacccaagtctgtgctcc |
15000588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28266127 - 28266083
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaag |
45 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28266127 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaag |
28266083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0266 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0266
Description:
Target: scaffold0266; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 6450 - 6200
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6450 |
ccttgcttcagattcagaaactcaacctccttcttggtcctcaagtcttcagggaaatacttcctcaagaattcaaccttgaacttagcccaggtcacca |
6351 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| || | ||||||||||||| |||||||||||||||||| ||| |||||||||||||| ||||||||||||| | ||||||||||||||||| ||| |
|
|
| T |
6350 |
catcatttcccaactcaagccttcccttggcattggtccactagtgctctgcttcctcagtcaacatatgagtcgctagtctgaccttctggtcatctcc |
6251 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgc |
251 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6250 |
cgtaaccatagctcggaaaatccgctccattccctgcacccaagtctgtgc |
6200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0225 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0225
Description:
Target: scaffold0225; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 27107 - 27360
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
27107 |
ccttgtttcagattcagaaactcaatctccttcttggtcctcaagtctttcgggaaataattcctcaagaattcaaacttgaacttagcccaggtcacca |
27206 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| ||| |||||| || || |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
27207 |
catcacctcccatctcaagtcttcctttggcattggtccaccagtactctgcttcctcagctagcatatgagtcgctaatctgaccttctggtcatctcc |
27306 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||| ||||||||||||| |||| |
|
|
| T |
27307 |
cgtaaccatagctcggaaaatccgctccatcccctgcacccaagtctgtcctcc |
27360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 23509271 - 23509524
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||| ||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
23509271 |
ccttgcttcagattcagaaactcaatcgccttcttggtcctcaagtcttcggggaaatacttcctcaagaattcaaccttgaacttagcccaggtcacca |
23509370 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| |||||| |||||| || ||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
23509371 |
catcacctcccaacttaagccttcctttggcattggtccaccagtgctctgcttcctcagtcaacatatgagtcgccagtctgaccttctggtcatctcc |
23509470 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
23509471 |
cgtaaccatagctcggaaaatccgctccatcccctgcacccaagtctgtgctcc |
23509524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 171; Significance: 6e-92; HSPs: 2)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 131079 - 130829
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
131079 |
ccttgcttcagattcagaaactcaacctccttcttggtcctcaagtcttcagggaaatacttcctcaagaattcaaccttgaacttagcccaggtcacca |
130980 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| || || |||| |||||||| |||||||||||||||||| ||| |||||||||||||| ||||||||||||||| ||| ||||| ||||||| | | |
|
|
| T |
130979 |
catcatctcccaattcaagccttcccttggcattggtccactagtgctctgcttcctcagtcaacatatgagtcgccagtctaaccttttggtcatcttc |
130880 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgc |
251 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
130879 |
cgtaacaatagctcagaaaatccgctccattccctgcacccaagtctgtgc |
130829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 27487 - 27740
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||| ||||||||| ||| |
|
|
| T |
27487 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttcagggaaatacttcctcaagaatttgactttgaacttagcccaggtcccca |
27586 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| ||| |||||| || || |||||||| |||||||||| || |||||||||||| ||||| |||||| | ||||||||||||||||| || |
|
|
| T |
27587 |
catcacctcccatctcaagtcttcctttggcattagtccaccagtgctttgcttcctcagcaagcatataagtcgctagtctgaccttctggtcatctct |
27686 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||| ||| |||||| ||||||||||||||| |||| ||||||||| |||||||| |
|
|
| T |
27687 |
cgtgaccgtagctcggaaaatccgctccatcccctgcacccaagtttgtgctcc |
27740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1140 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: scaffold1140
Description:
Target: scaffold1140; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 302 - 555
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
302 |
ccttgtttcagattcagaaactcaatctccttcttggtcctcaagtcttacgggaaatacttcctcaagaattcaaccttgaacttagcccacgtcacca |
401 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| |||| ||||||||||||| || |||||||| ||||| |||| |||||||||||||||| |||||||||||| | ||||||||||||||||| ||| |
|
|
| T |
402 |
cataacctcccaactcaagccttcctttggcattagtccatcagtgctctgcttcctcagctagcatatgagtcgctagtctgaccttctggtcatctcc |
501 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||| ||||||||| |||||||| |
|
|
| T |
502 |
cgtaaccatagctcggaaaatccgctccataccctgcacccaagtatgtgctcc |
555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 7 - 251
Target Start/End: Original strand, 22281424 - 22281668
Alignment:
| Q |
7 |
ttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcaccacaccac |
106 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |
|
|
| T |
22281424 |
ttcagattcaaaaactcaatctccttcttggtcctcaagtctttcgggaaatacttcctcaagaattcaaccttgaacttagcccaggttaccacatcac |
22281523 |
T |
|
| Q |
107 |
cttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcccgtaac |
206 |
Q |
| |
|
|| ||| ||||||||| || ||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
22281524 |
ctcccatctcaagccttcctttggcattggtccaccagtgctctgcttcctcagtcaacatatgagtcgccagtctgaccttctggtcatctcccgtaac |
22281623 |
T |
|
| Q |
207 |
catagctcagaaaatccgctccattcccttcacccaagtctgtgc |
251 |
Q |
| |
|
|||||||| ||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
22281624 |
catagctcggaaaatccgctccatcccctgcacccaagtctgtgc |
22281668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0467 (Bit Score: 166; Significance: 6e-89; HSPs: 2)
Name: scaffold0467
Description:
Target: scaffold0467; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 12924 - 12671
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
12924 |
ccttgtttcagattcagaaactcaatttccttcttggtcctcaagtcttcagggaaatacttcctcaagaattcaaccttgaacttagcccagttcacca |
12825 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| ||| |||||| || || |||||||| | |||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
12824 |
catcacctcccatctcaagtcttcctttggcattagcccaccagtgctctgcttcctcagctagcatatgagtcgccagtctgaccttctggtcatctcc |
12725 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
12724 |
cgtaaccatagctcggaaaatccgctccatcccctagacccaagtctgtgctcc |
12671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0467; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 214 - 1
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
214 |
ccttgtttcagattcagaaactcaatttccttcttggtcctcaagtcttcagggaaatacttcctcaagaattcaaccttgaacttagcccagttcacca |
115 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| ||| |||||| || || |||||||| | |||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
114 |
catcacctcccatctcaagtcttcctttggcattagcccaccagtgctctgcttcctcagctagcatatgagtcgccagtctgaccttctggtcatctcc |
15 |
T |
|
| Q |
201 |
cgtaaccatagctc |
214 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
14 |
cgtaaccatagctc |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 8029 - 7776
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
8029 |
ccttgtttcagattcagaaacttcatctccttcttggccctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacatagcccaggtcacct |
7930 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| |||||||||||||||| ||||||||||||||| ||| || ||||||||||||| |||||||||||| | | ||||||||||||||| ||| |
|
|
| T |
7929 |
catcacctcccaactcaagcctgcctttggcattggtccactagtgctatgcttcctcagctagcatatgagtcgctagtttgaccttctggtcatctcc |
7830 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
7829 |
cgtaaccatagctcggaaaatccgctccatcccctacacccaagtctgtgctcc |
7776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 7 - 251
Target Start/End: Original strand, 20928757 - 20929001
Alignment:
| Q |
7 |
ttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcaccacaccac |
106 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
20928757 |
ttcagattcagaaactcaatctccttcttggtcctcaagtcttcggggaaatacttccttaagaattcaaccttgaacttagcccaggtcaccacatcat |
20928856 |
T |
|
| Q |
107 |
cttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcccgtaac |
206 |
Q |
| |
|
|| ||| ||||||||| |||||||||||||||||||| | |||||||||||||| || |||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
20928857 |
ctcccatctcaagccttcccttggcattggtccaccaatgctctgcttcctcagtcaacttatgagtcgccagtctgaccttctggtcatctcccgtaac |
20928956 |
T |
|
| Q |
207 |
catagctcagaaaatccgctccattcccttcacccaagtctgtgc |
251 |
Q |
| |
|
|||||||| ||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
20928957 |
catagctcggaaaatccgttccattccctacacccaagtctgtgc |
20929001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 20528756 - 20528999
Alignment:
| Q |
7 |
ttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcaccacaccac |
106 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
20528756 |
ttcagattcagaaactcaatgtccttcttggtcctcaagtcttcggggaaatacttcctcaagaattcaaccttgaacttagcccaggtcaccacatcat |
20528855 |
T |
|
| Q |
107 |
cttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcccgtaac |
206 |
Q |
| |
|
|| ||| ||||||||| || |||||||| |||||||||| |||||||||||||| ||||||||||||| | ||| ||||||||||||| | ||||||| |
|
|
| T |
20528856 |
ctcccatctcaagccttcctttggcattagtccaccagtgctctgcttcctcagtcaacatatgagtcgctagtctaaccttctggtcatcttccgtaac |
20528955 |
T |
|
| Q |
207 |
catagctcagaaaatccgctccattcccttcacccaagtctgtg |
250 |
Q |
| |
|
||||||| ||||||||||||||| | || |||||||||||||| |
|
|
| T |
20528956 |
catagcttggaaaatccgctccatcctctgcacccaagtctgtg |
20528999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 159; Significance: 9e-85; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 15943424 - 15943174
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||| || |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
15943424 |
ccttgctttagattcagaaactcaatctcattcttggtcctcaagtcttccgggaaatacttccttaagaattcaaccttgaacttagcccaggtcacca |
15943325 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||| ||||||||||||||| ||| ||||| ||||||| ||| |
|
|
| T |
15943324 |
catcaccttccaactcaagccttcccttggcattggtccaccagtgctccgcttcctcagtcaacatatgagtcgccagtctaaccttttggtcatctcc |
15943225 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgc |
251 |
Q |
| |
|
||||||||||||| ||||||| ||||||| || | ||||||||||||||| |
|
|
| T |
15943224 |
tgtaaccatagctcggaaaatctgctccatcccttgcacccaagtctgtgc |
15943174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 6149682 - 6149429
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
6149682 |
ccttgtttcagattcagaaactcaatctccttcttggtcctcaagtcttcagggaaatacttcctcaagaattcaaccttaaacttcgcccaggtcacca |
6149583 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| ||| |||||| || || |||||||| |||||||||| ||||||||||||||| |||||||||||| | ||||||||||||||| ||| |
|
|
| T |
6149582 |
catcacctcccatctcaagtcttcctttggcattagtccaccagtgctctgcttcctcagcaagcatatgagtcgctagcctgaccttctggtcacctcc |
6149483 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|| |||||||||| ||||||||||||||| |||| ||||||||| |||||||| |
|
|
| T |
6149482 |
tgtcaccatagctcggaaaatccgctccataccctgcacccaagtttgtgctcc |
6149429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 25768526 - 25768779
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| ||| | |||||||| ||||||||||| | |
|
|
| T |
25768526 |
ccttgtttcaagttcagaaactcaacctccttcctggtcctcaaatcttcagggaaatacttcctcaagaactcagctttgaacttcgcccaggtcacaa |
25768625 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
| | ||| |||||||||| || || |||||||| |||||||| | || || |||||||| |||||||||||||||||||||||| ||||||| | |
|
|
| T |
25768626 |
cttctcctcccaactcaagtcttcctttggcattagtccaccaatgttcggcctcctcagcaagcatatgagtcgccaatctgaccttttggtcatcact |
25768725 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||| |||||||| | ||| |||| ||| || |||| ||||||||| || ||||| |
|
|
| T |
25768726 |
cgtcaccatagcacggaatatcctctctatgccctgcacccaagtatgagctcc |
25768779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 196
Target Start/End: Complemental strand, 22149539 - 22149380
Alignment:
| Q |
37 |
gtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcaccacaccaccttccaactcaagcctgcccttggcattgg |
136 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||| || |||||||| | ||||| |||||||| | || |||| |||||| || || |||||||| | |
|
|
| T |
22149539 |
gtcctcaaatcttccgaaaaatacttcctcaagaactcggccttgaaccttgcccaagtcaccacctccccctccatctcaagtcttcctttggcattag |
22149440 |
T |
|
| Q |
137 |
tccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcat |
196 |
Q |
| |
|
||||| | |||||||| |||||||| ||||||||| ||||| || ||||||||||||| |
|
|
| T |
22149439 |
tccactaatactctgcctcctcagcaagcatatgagtagccaacctaaccttctggtcat |
22149380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 17201959 - 17202192
Alignment:
| Q |
13 |
ttcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcaccacaccaccttcca |
112 |
Q |
| |
|
||||| ||||| || |||||| |||||||||| ||||| || ||||||||||||||||| ||| | |||||||| ||||| ||||| || | || | | |
|
|
| T |
17201959 |
ttcaggaactccacttccttcctggtcctcaaatcttcaggaaaatacttcctcaagaactcagctttgaactttgcccaagtcacaacttctccaccaa |
17202058 |
T |
|
| Q |
113 |
actcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcccgtaaccatagc |
212 |
Q |
| |
|
|||||| || ||||| ||||| |||||| | ||||| || |||||||| ||| ||||| ||||| || |||||||| |||| | ||| |||||||| |
|
|
| T |
17202059 |
tctcaagtcttcccttagcattagtccactaatactcggcctcctcagcaagcatgtgagtagccaacctcaccttctgttcatcactcgtcaccatagc |
17202158 |
T |
|
| Q |
213 |
tcagaaaatccgctccattcccttcacccaagtc |
246 |
Q |
| |
|
| || |||| |||||| |||| |||||||||| |
|
|
| T |
17202159 |
acgaaatatcctctccatgccctgcacccaagtc |
17202192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 5224957 - 5225013
Alignment:
| Q |
198 |
tcccgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||| ||||||||||| |||||| |
|
|
| T |
5224957 |
tcccgtaaccatagcttggaaaatccgctccatcccctgcacccaagtctatgctcc |
5225013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0462 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0462
Description:
Target: scaffold0462; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 3422 - 3675
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | | |||||||| ||||||||||||| |
|
|
| T |
3422 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttcagggaaatacttcctcaataattaagctttgaacttagcccaggtcacca |
3521 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| ||| |||||| || || |||||||| |||||| ||| ||||||||||||||| |||||||||||| | ||||||||||||||||| ||| |
|
|
| T |
3522 |
catcacctcccatctcaagtcttcctttggcattagtccactagttctctgcttcctcagcaagcatatgagtcgctagtctgaccttctggtcatctcc |
3621 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||| |||||||||| ||||||||||||||| |||| ||||||||| |||||||| |
|
|
| T |
3622 |
cgtcaccatagctcggaaaatccgctccataccctgcacccaagtttgtgctcc |
3675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0615 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0615
Description:
Target: scaffold0615; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 8982 - 8732
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
8982 |
ccttgtttcagattcagaaactcaacctccttattggtcctcaagtcttcagggaaatacttcctcaagaattcaaccttgaacttagcccaggtcacca |
8883 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| |||||||| | || || ||||| | |||||||||| |||||| ||||||| ||||||||||||| | |||||||||||||||| | | |
|
|
| T |
8882 |
catcacctcccaactcatgtcttcctttggcgctagtccaccagtgctctgcctcctcagtcaacatatgagtcgctagcctgaccttctggtcatcttc |
8783 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgc |
251 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||| || |||||||||||| |
|
|
| T |
8782 |
cgtaaccatagctcggaaaatccgctccataccctgcatccaagtctgtgc |
8732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0302
Description:
Target: scaffold0302; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 48 - 254
Target Start/End: Original strand, 3168 - 3374
Alignment:
| Q |
48 |
ttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcaccacaccaccttccaactcaagcctgcccttggcattggtccaccagtac |
147 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||| | | |
|
|
| T |
3168 |
ttccgggaaatacttcctcaagaattcaaccttgaacttagcccaggtcaccacatcacctcccaactcaagccttcccttggcattggtccaccaatgc |
3267 |
T |
|
| Q |
148 |
tctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcccgtaaccatagctcagaaaatccgctccattcccttcacccaagtct |
247 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||||||||||||||| |||| ||||||||||| |
|
|
| T |
3268 |
tctgcttcctcagtcaacatatgagtcgccagtctaaccttctggtcatctcccgtaaccatagctcggaaaatccgctccatcccctgcacccaagtct |
3367 |
T |
|
| Q |
248 |
gtgctcc |
254 |
Q |
| |
|
||||||| |
|
|
| T |
3368 |
gtgctcc |
3374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 544 - 315
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
544 |
ccttgcttcagatttagaaactcaatctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacgtagcccaggtcacca |
445 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| ||||||||||||| || ||||| || |||||||||| ||||||||| |||||| ||||||||| || | | ||||||||| ||||| ||| |
|
|
| T |
444 |
catcacctcccaactcaagccttcctttggcgtttgtccaccagtgctctgcttcttcagctagcatatgagttgcaagtttgaccttctagtcatctcc |
345 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccat |
230 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |
|
|
| T |
344 |
cgtaaccatagctcggaaaatccgctccat |
315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0610 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold0610
Description:
Target: scaffold0610; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 3519 - 3266
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||| |||||||||| | |
|
|
| T |
3519 |
ccttgtttcagattcaaaaactcaacctccttcttggtcctcaagtcttcagggaaatacttcctcaagaattcagctttgaacttttcccaggtcacaa |
3420 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
| ||||| ||| ||||| || ||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||| ||||||||||||| ||| |
|
|
| T |
3419 |
cttcacctcccatatcaagtcttcccttggcattagtccaccagtgctccgcttcctcagtaagcatatgagtcgccaatctaaccttctggtcatctcc |
3320 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||| |||||||| ||| ||||||||||| |||| |||||||||||||||||| |
|
|
| T |
3319 |
cgtcaccatagcatggaatatccgctccatgccctgcacccaagtctgtgctcc |
3266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0673 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0673
Description:
Target: scaffold0673; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 4963 - 4711
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
4963 |
ccttgtttcagattcagaaactcaatctccttcttggtcctcaagtcttcagggaaatacttcctctagaattcaaccttgaacttagcccaggtcacca |
4864 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| ||||| ||| ||||| ||| || ||| |||| ||| || ||| ||||||||||||||| ||| |||||||||| ||||||||||||||||| ||| |
|
|
| T |
4863 |
catcacctcccatctcaa-ccttcctttgacattagtcaactagtgctctgcttcctcagcaagcatttgagtcgccagtctgaccttctggtcatctcc |
4765 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|| |||| ||||||||||||| | ||||| |||| ||||||||| ||||||| |
|
|
| T |
4764 |
tgtgaccacagctcagaaaatctgttccatgccctgcacccaagttcgtgctcc |
4711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0120 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0120
Description:
Target: scaffold0120; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 25890 - 26142
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||| |||||||||||| |||||||| ||||| ||||||| |
|
|
| T |
25890 |
ccttgtttcagattcagaaactcaacctccttcttagttctcaagtcttcagggaaatacttcc-caagaattcaactttgaacttagcccaagtcacca |
25988 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
|| |||| ||| |||||| || || |||||||| |||||||||| ||||||||||||| | |||||||||||| | ||||||||||||||||| ||| |
|
|
| T |
25989 |
cattacctcccatctcaagtcttcctttggcattagtccaccagtgctctgcttcctcaacaagcatatgagtcgctagtctgaccttctggtcatctcc |
26088 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|| |||||||||| |||||||| | |||| |||| |||||||||||||||||| |
|
|
| T |
26089 |
tgtcaccatagctcggaaaatccaccccataccctgcacccaagtctgtgctcc |
26142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 68 - 254
Target Start/End: Complemental strand, 73251 - 73065
Alignment:
| Q |
68 |
agaattcaaccttgaacttggcccaggtcaccacaccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacat |
167 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| || ||||| || |||||||||| |||||||||||| ||| ||| |
|
|
| T |
73251 |
agaattcaaccttgaacttagcccaggtcaccacatcacctcccaactcaagccttcctttggcgttagtccaccagtgctctgcttcctcggctagcat |
73152 |
T |
|
| Q |
168 |
atgagtcgccaatctgaccttctggtcatatcccgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||| | || |||| |||||||||||||||||| |
|
|
| T |
73151 |
atgagtcgctagtctgaccttctggtcatctcccgtaaccatagctcggaaaatccgcgctataccctgcacccaagtctgtgctcc |
73065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 68 - 254
Target Start/End: Complemental strand, 77632 - 77446
Alignment:
| Q |
68 |
agaattcaaccttgaacttggcccaggtcaccacaccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacat |
167 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| || ||||| || |||||||||| |||||||||||| ||| ||| |
|
|
| T |
77632 |
agaattcaaccttgaacttagcccaggtcaccacatcacctcccaactcaagccttcctttggcgttagtccaccagtgctctgcttcctcggctagcat |
77533 |
T |
|
| Q |
168 |
atgagtcgccaatctgaccttctggtcatatcccgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||| | || |||| |||||||||||||||||| |
|
|
| T |
77532 |
atgagtcgctagtctgaccttctggtcatctcccgtaaccatagctcggaaaatccgcgctataccctgcacccaagtctgtgctcc |
77446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 97236 - 97489
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | |||||||| | ||||||||| | |
|
|
| T |
97236 |
ccttgtttcagattcaaaaactcaacctccttcttggtcctcaagtcttcagggaaatatttcctcaagaattcagctttgaactttgtccaggtcacaa |
97335 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
| | | | |||||||| || | |||||||| |||||||| | ||| ||||||||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
97336 |
cttcttcaccaaactcaagtcttcttttggcattagtccaccactgctcagcttcctcagcaagcatatgagtcgccaatctgaccttctggtcatctcc |
97435 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||| |||||||| | ||| ||||||||||| | || ||||||||||| ||||| |
|
|
| T |
97436 |
cgtcaccatagcacggaatatccgctccatgctctgtacccaagtctgggctcc |
97489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 8868 - 9121
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcacca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||||||| ||||||||||| | |
|
|
| T |
8868 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttcagggaaatacttcatcaagaattcagctttgaacttcgcccaggtcacaa |
8967 |
T |
|
| Q |
101 |
caccaccttccaactcaagcctgcccttggcattggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcc |
200 |
Q |
| |
|
| |||| ||| ||||| || || |||||||| ||||| ||| ||| ||||||||| | |||| ||||||||| | |||||||||| ||| ||| |
|
|
| T |
8968 |
ctttacctcccatctcaattcttcctttggcattagtccaatagtgctcagcttcctcaacaagcatacgagtcgccagtttgaccttctgatcacctcc |
9067 |
T |
|
| Q |
201 |
cgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||| |||||||| | ||| ||||||||| | |||| |||||| || |||||||| |
|
|
| T |
9068 |
cgtcaccatagcaccgaatatccgctccgtgccctgcacccacgtttgtgctcc |
9121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 91216 - 91320
Alignment:
| Q |
4 |
tgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggtcaccacac |
103 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
91216 |
tgtttcagattcagaaactcaatctccttcttggtcctcaagtcttcagggaaatacttcctcaagaattcaaccttgaacttagcccaggtcaccacat |
91315 |
T |
|
| Q |
104 |
cacct |
108 |
Q |
| |
|
||||| |
|
|
| T |
91316 |
cacct |
91320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0465 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0465
Description:
Target: scaffold0465; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 132 - 254
Target Start/End: Complemental strand, 12121 - 11999
Alignment:
| Q |
132 |
attggtccaccagtactctgcttcctcagcttacatatgagtcgccaatctgaccttctggtcatatcccgtaaccatagctcagaaaatccgctccatt |
231 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
12121 |
attggtccaccagtgctctgcttcctcagtcaacatatgagtcgccagtctgaccttctggtcatctcccgtaaccatagctcggaaaatccgctccatc |
12022 |
T |
|
| Q |
232 |
cccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
|||| |||||||||| ||||||| |
|
|
| T |
12021 |
ccctgcacccaagtccgtgctcc |
11999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0465; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12218 - 12124
Alignment:
| Q |
1 |
ccttgtttcagattcagaaactcaacctccttcttggtcctcaagtcttccgggaaatacttcctcaagaattcaaccttgaacttggcccaggt |
95 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
12218 |
ccttgtttcagattcagaaactcaatctccttcttggtcctcaagtcttcggggaaatacttcctcaataattcaaccttgaacttagcccaggt |
12124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0162
Description:
Target: scaffold0162; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 16664 - 16753
Alignment:
| Q |
165 |
catatgagtcgccaatctgaccttctggtcatatcccgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||||||||| || | ||||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
16664 |
catatgagttgctagtctgaccttatggtcatctcccgtaaccatagctcggaaaatccgctccataccctgcacccaagtctgtgctcc |
16753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 254
Target Start/End: Complemental strand, 16575208 - 16575119
Alignment:
| Q |
165 |
catatgagtcgccaatctgaccttctggtcatatcccgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||||||||| |||| ||||||||||||||||| |||| | ||||| || ||| ||||||||||| |||| |||| ||||||||||||| |
|
|
| T |
16575208 |
catatgagttgccagtctgaccttctggtcatctcccatcaccatggcatggaatatccgctccatgccctgcacctaagtctgtgctcc |
16575119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 16590454 - 16590543
Alignment:
| Q |
165 |
catatgagtcgccaatctgaccttctggtcatatcccgtaaccatagctcagaaaatccgctccattcccttcacccaagtctgtgctcc |
254 |
Q |
| |
|
||||||||| |||| ||||||||||||||||| |||| | ||||| || ||| ||||||||||| |||| |||| ||||||||||||| |
|
|
| T |
16590454 |
catatgagttgccagtctgaccttctggtcatctcccatcaccatggcatggaatatccgctccatgccctgcacctaagtctgtgctcc |
16590543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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