View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8895_low_28 (Length: 244)
Name: NF8895_low_28
Description: NF8895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8895_low_28 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 32866167 - 32866390
Alignment:
| Q |
18 |
gtttggactttgaattatatgaagccctttttctttcctacaaatcttttactctatttacaagatttattttacatatgcggttttgtaaaaaataaat |
117 |
Q |
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| T |
32866167 |
gtttggactttgaattatatgaagccctttttctttcctaccaatcttttactctatttacaagatttattttacatatggggttttgtaaaaaataaat |
32866266 |
T |
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| Q |
118 |
ggcctatactcactttacaaataatcttaacaattagtagtgctattaaataaacctacggttagatattgggtacacaaataattccaataattattat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
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| T |
32866267 |
ggcctatactcactttacaaataatcttaacaattagtagtgctattaaataaacctacggttaaatattgggtacacaaataattccaata---attat |
32866363 |
T |
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| Q |
218 |
taataatacaatttctaaaaagtgtgc |
244 |
Q |
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| T |
32866364 |
taataatacaatttctaaaaagtgtgc |
32866390 |
T |
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