View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8899_low_66 (Length: 318)

Name: NF8899_low_66
Description: NF8899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8899_low_66
NF8899_low_66
[»] chr1 (33 HSPs)
chr1 (1-308)||(45825546-45825858)
chr1 (1-308)||(23275214-23275526)
chr1 (2-308)||(51321382-51321685)
chr1 (24-308)||(35258004-35258282)
chr1 (6-308)||(31782823-31783131)
chr1 (1-308)||(47502954-47503266)
chr1 (1-304)||(52802805-52803114)
chr1 (6-308)||(2424305-2424612)
chr1 (6-308)||(19524289-19524590)
chr1 (1-146)||(38126597-38126741)
chr1 (6-308)||(19525137-19525438)
chr1 (6-308)||(19525798-19526099)
chr1 (6-308)||(19526272-19526573)
chr1 (1-146)||(47656682-47656827)
chr1 (188-306)||(49857281-49857399)
chr1 (6-298)||(22524910-22525195)
chr1 (6-146)||(97018-97158)
chr1 (1-146)||(50343083-50343228)
chr1 (2-214)||(49857061-49857277)
chr1 (24-214)||(30890778-30890973)
chr1 (234-307)||(11196351-11196424)
chr1 (24-122)||(19156877-19156975)
chr1 (6-91)||(21141746-21141831)
chr1 (247-308)||(19524716-19524777)
chr1 (247-308)||(19524903-19524964)
chr1 (247-308)||(19525564-19525625)
chr1 (247-308)||(19526699-19526760)
chr1 (24-146)||(13639118-13639241)
chr1 (24-146)||(3731478-3731600)
chr1 (24-146)||(26876496-26876618)
chr1 (247-308)||(19526886-19526947)
chr1 (59-135)||(2366077-2366153)
chr1 (184-216)||(30890674-30890706)
[»] chr8 (29 HSPs)
chr8 (1-308)||(34822107-34822420)
chr8 (1-308)||(40076348-40076663)
chr8 (1-308)||(5303331-5303643)
chr8 (24-308)||(15035842-15036131)
chr8 (6-308)||(39252672-39252976)
chr8 (6-308)||(43212175-43212482)
chr8 (6-308)||(41249204-41249511)
chr8 (6-294)||(39602271-39602564)
chr8 (1-308)||(39846089-39846403)
chr8 (41-304)||(45064904-45065174)
chr8 (1-308)||(43188718-43189029)
chr8 (1-146)||(35552479-35552624)
chr8 (6-308)||(39938315-39938621)
chr8 (6-146)||(20858099-20858239)
chr8 (2-146)||(37327660-37327803)
chr8 (10-122)||(5677897-5678009)
chr8 (2-122)||(45128577-45128698)
chr8 (6-122)||(34369634-34369750)
chr8 (6-122)||(34370962-34371078)
chr8 (24-214)||(42484697-42484891)
chr8 (2-214)||(2984875-2985100)
chr8 (24-213)||(488816-489013)
chr8 (24-146)||(1053378-1053500)
chr8 (24-146)||(23021418-23021540)
chr8 (24-146)||(26660300-26660422)
chr8 (24-146)||(24635-24757)
chr8 (203-298)||(2984758-2984850)
chr8 (161-202)||(45128489-45128530)
chr8 (184-216)||(489057-489089)
[»] chr3 (36 HSPs)
chr3 (1-308)||(42756820-42757133)
chr3 (1-308)||(49195557-49195869)
chr3 (1-308)||(20917108-20917419)
chr3 (1-308)||(20926070-20926381)
chr3 (6-306)||(3976378-3976683)
chr3 (1-308)||(49268360-49268672)
chr3 (10-308)||(48563596-48563903)
chr3 (2-308)||(30255095-30255406)
chr3 (6-304)||(50963631-50963934)
chr3 (24-308)||(42165832-42166122)
chr3 (1-307)||(44230383-44230683)
chr3 (59-308)||(4007472-4007726)
chr3 (6-304)||(47073303-47073606)
chr3 (6-308)||(597570-597877)
chr3 (9-308)||(50216036-50216343)
chr3 (159-308)||(48889403-48889552)
chr3 (1-146)||(20351441-20351586)
chr3 (1-146)||(17567187-17567333)
chr3 (170-286)||(54682060-54682171)
chr3 (1-122)||(41613194-41613315)
chr3 (229-308)||(42805586-42805665)
chr3 (6-146)||(2274020-2274160)
chr3 (6-122)||(36128458-36128574)
chr3 (10-146)||(52390489-52390625)
chr3 (6-122)||(16611943-16612059)
chr3 (6-122)||(22047194-22047310)
chr3 (24-146)||(29009713-29009835)
chr3 (24-146)||(42903287-42903409)
chr3 (24-146)||(49143560-49143682)
chr3 (24-146)||(50479904-50480026)
chr3 (24-146)||(34046229-34046351)
chr3 (24-146)||(46701123-46701245)
chr3 (24-146)||(54386977-54387099)
chr3 (24-146)||(46389804-46389926)
chr3 (77-122)||(48889594-48889639)
chr3 (2-46)||(48889633-48889677)
[»] chr5 (19 HSPs)
chr5 (1-308)||(42537818-42538130)
chr5 (2-308)||(42941579-42941891)
chr5 (6-308)||(13893-14199)
chr5 (8-308)||(28877312-28877617)
chr5 (24-304)||(8579620-8579905)
chr5 (2-308)||(8701316-8701628)
chr5 (2-308)||(38968767-38969079)
chr5 (2-308)||(17658991-17659298)
chr5 (194-308)||(7757994-7758108)
chr5 (2-146)||(40624019-40624163)
chr5 (6-146)||(5197776-5197916)
chr5 (4-108)||(19228041-19228145)
chr5 (24-146)||(27672766-27672888)
chr5 (6-122)||(7758166-7758282)
chr5 (24-146)||(28240937-28241059)
chr5 (26-146)||(19040216-19040336)
chr5 (24-146)||(30705939-30706061)
chr5 (159-214)||(28241080-28241135)
chr5 (184-216)||(28241227-28241259)
[»] chr4 (41 HSPs)
chr4 (1-308)||(51683871-51684183)
chr4 (1-304)||(55406879-55407187)
chr4 (8-308)||(21021987-21022292)
chr4 (6-308)||(37021174-37021481)
chr4 (6-308)||(50275385-50275692)
chr4 (24-308)||(40357395-40357684)
chr4 (2-308)||(50902148-50902448)
chr4 (159-308)||(48255826-48255975)
chr4 (1-146)||(30704837-30704982)
chr4 (24-248)||(1088838-1089069)
chr4 (2-122)||(11083104-11083224)
chr4 (2-122)||(41932748-41932868)
chr4 (1-122)||(50194316-50194437)
chr4 (2-122)||(46437059-46437179)
chr4 (2-121)||(10752532-10752651)
chr4 (2-121)||(10966301-10966420)
chr4 (188-308)||(68189-68306)
chr4 (6-122)||(44679154-44679270)
chr4 (24-214)||(30725906-30726102)
chr4 (6-122)||(3184854-3184970)
chr4 (75-214)||(14316132-14316268)
chr4 (24-207)||(1308268-1308456)
chr4 (184-248)||(30726162-30726226)
chr4 (26-146)||(41798094-41798214)
chr4 (24-146)||(6180887-6181009)
chr4 (24-146)||(31422542-31422664)
chr4 (24-146)||(49091274-49091396)
chr4 (36-146)||(9892387-9892497)
chr4 (24-146)||(49165887-49166009)
chr4 (162-214)||(11049839-11049891)
chr4 (238-298)||(21537868-21537928)
chr4 (203-298)||(11049916-11050008)
chr4 (62-122)||(11049726-11049786)
chr4 (159-214)||(10752703-10752758)
chr4 (159-214)||(10966472-10966527)
chr4 (70-122)||(3185018-3185070)
chr4 (6-122)||(21537566-21537682)
chr4 (74-146)||(50022741-50022813)
chr4 (187-236)||(10752761-10752810)
chr4 (187-236)||(10966530-10966579)
chr4 (184-216)||(1308542-1308574)
[»] chr6 (10 HSPs)
chr6 (1-308)||(6319655-6319967)
chr6 (159-308)||(31769375-31769524)
chr6 (1-146)||(24722706-24722851)
chr6 (188-298)||(24088066-24088176)
chr6 (2-214)||(24087845-24088062)
chr6 (26-146)||(27617569-27617689)
chr6 (24-146)||(6202002-6202124)
chr6 (24-146)||(11688969-11689091)
chr6 (24-146)||(22302034-22302156)
chr6 (24-146)||(30828749-30828871)
[»] chr7 (31 HSPs)
chr7 (1-308)||(37340973-37341286)
chr7 (26-308)||(9493921-9494200)
chr7 (24-308)||(17835746-17836035)
chr7 (6-308)||(10517564-10517871)
chr7 (1-308)||(27452710-27453023)
chr7 (6-308)||(34739035-34739340)
chr7 (159-308)||(47672350-47672499)
chr7 (159-308)||(36978267-36978415)
chr7 (1-146)||(39461294-39461439)
chr7 (1-146)||(16677865-16678010)
chr7 (1-146)||(17652101-17652246)
chr7 (1-146)||(19798109-19798254)
chr7 (6-122)||(5540671-5540787)
chr7 (159-259)||(39461169-39461269)
chr7 (1-146)||(47777087-47777232)
chr7 (24-214)||(15073382-15073579)
chr7 (229-308)||(47777003-47777082)
chr7 (2-122)||(14689250-14689369)
chr7 (6-122)||(46739609-46739725)
chr7 (184-248)||(15073649-15073713)
chr7 (27-214)||(42507194-42507388)
chr7 (24-146)||(17462402-17462524)
chr7 (24-146)||(17590690-17590812)
chr7 (184-248)||(42507448-42507512)
chr7 (24-146)||(9370487-9370609)
chr7 (24-146)||(41881344-41881466)
chr7 (24-146)||(48404211-48404333)
chr7 (244-308)||(14689405-14689469)
chr7 (24-146)||(35609523-35609645)
chr7 (56-146)||(36978433-36978523)
chr7 (258-298)||(556121-556161)
[»] chr2 (20 HSPs)
chr2 (6-308)||(45429260-45429567)
chr2 (6-308)||(39948270-39948577)
chr2 (24-308)||(28469310-28469599)
chr2 (1-308)||(45136397-45136707)
chr2 (159-304)||(22687052-22687197)
chr2 (194-308)||(32955648-32955762)
chr2 (6-146)||(10828099-10828239)
chr2 (4-122)||(25514978-25515096)
chr2 (8-135)||(29400696-29400823)
chr2 (24-146)||(15831971-15832093)
chr2 (184-248)||(17421155-17421219)
chr2 (26-146)||(17421365-17421485)
chr2 (24-146)||(3939837-3939959)
chr2 (24-146)||(30496044-30496166)
chr2 (24-146)||(43979373-43979495)
chr2 (1-122)||(36655482-36655596)
chr2 (24-146)||(5352808-5352930)
chr2 (24-122)||(43538835-43538933)
chr2 (164-214)||(17421289-17421339)
chr2 (161-202)||(25515143-25515184)
[»] scaffold0180 (1 HSPs)
scaffold0180 (6-308)||(14718-15025)
[»] scaffold0155 (1 HSPs)
scaffold0155 (2-293)||(10940-11242)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-144)||(18047-18190)
[»] scaffold0293 (2 HSPs)
scaffold0293 (184-248)||(164-228)
scaffold0293 (159-214)||(49-104)
[»] scaffold0634 (1 HSPs)
scaffold0634 (266-308)||(8017-8059)


Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 45825858 - 45825546
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  45825858 cgaagtccctgaaccatccaacctccgacctcttcccctctttgggatgtgcccactttgtctctccttccggtggctctgagtcatcgcacgcctacca 45825759  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |     |         |||||||||||||||||||||||||||||||||| ||    
T  45825758 ccaatcatcttagatggatcaaccgggttctgatcagacatatctacacaaaaaatttaaaaattaacatcatttccataacctaatcaaacacattaaa 45825659  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45825658 cctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaa 45825559  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  45825558 atttatgtccatc 45825546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 23275214 - 23275526
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| ||||||    
T  23275214 cgaactccctgaaccatccaccatccgacctcttcccctctttgggatgtgcccgctttgcctctcctttcgatggctttgagtcatcgcacgcctacca 23275313  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |     |         |||||||||||||||||||||||||||||||||| ||    
T  23275314 ccaatcatcttagatggatcaaccgggttctgatcagacatatctacacaaaaaattaaaaatttaacatcatttccataacctaatcaaacacattaaa 23275413  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  23275414 cctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaacatcatttccataacttaaaatcattcaatataatcatcattacaataaa 23275513  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  23275514 atttatgtccatc 23275526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 2 - 308
Target Start/End: Complemental strand, 51321685 - 51321382
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||  || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  51321685 gaagtccctgaaccatctcccctccgacctcttcccctctttgggatgtgcccgctttgcctctccttccggtggctttgggtcatcgcacgcctaccac 51321586  T
Q  102 ctatcatcttagatggatcaaccgggttctgatcagacatatctagaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaa 201  Q
    | |||||||||||||||||||   ||| |||||| | |||||||| |          |||||||||||| ||||||||||||||||||||| ||||||||    
T  51321585 caatcatcttagatggatcaatgaggtcctgatcggccatatctaca---caaaaaattaacatcattttcataacctaatcaaacacattaaacctaaa 51321489  T
Q  202 ctaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgat 301  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  51321488 ctaaacataaacataatcaaacacattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaatttat 51321389  T
Q  302 gtccatc 308  Q
    |||||||    
T  51321388 gtccatc 51321382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 24 - 308
Target Start/End: Original strand, 35258004 - 35258282
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||||||  |||||||||||||||| |||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||||||     
T  35258004 tccgacctcttcctttctttgggatgtgcccgctttgcctctccttccggtggctttgggtcatcgcacacctaccaccaatcatcttagatggatcaat 35258103  T
Q  124 cgggttctgatcagacatatctagaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaatcaaac 223  Q
     |||| ||||||   |||||||| |          ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35258104 ggggtcctgatc---catatctaca---caaaaaattaacattatttccataacctaatcaaacacattaaacctaaactaaacataaacaaaatcaaac 35258197  T
Q  224 tgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  35258198 tcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaattttatgtccatc 35258282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 31782823 - 31783131
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  ||||||||||||| ||||||||||||||||| || || ||||||||| || ||||||| |||||||||||||| |||||||| ||    
T  31782823 tccctgaaccatctcccttccgacctctacccctctttgggatgtggccgctctgcctctccctctggtggctctgagtcatcgcacgcctaccaccaat 31782922  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga------agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaaccta 199  Q
    |||||||||||||||||  |||| |||||| | |||||||| |      |         |||||||||||||||||||||||||||||||||| || |||    
T  31782923 catcttagatggatcaatggggtcctgatcggccatatctacacaaaaaaataataaaattaacatcatttccataacctaatcaaacacattaaaacta 31783022  T
Q  200 aactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattg 299  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  31783023 aactaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaattt 31783122  T
Q  300 atgtccatc 308  Q
    |||||||||    
T  31783123 atgtccatc 31783131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 47503266 - 47502954
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| |||||||||| |||||||||| |||||| || ||||| |||||| |||||||||| |||||||||||||| ||||||    
T  47503266 cgaactccctgaaccatccaccctccgacctctacccctctttgagatgtggccgctttgtctctccctccggtggctctgagtcatcgcacgcctacca 47503167  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    || |||||||||||| ||||||  |  | |||||| | |||||||| |     |         |||||||||||||||||||||||||||||| ||| ||    
T  47503166 ccaatcatcttagatcgatcaatggaatcctgatcggccatatctacacaaaaaataataaaattaacatcatttccataacctaatcaaacatattaaa 47503067  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  47503066 cctaaattaaacataaacataatcaaactcattaaaagtacaacaatgaatatcatttccataacataaaatcattcaatataatcatcattacaataaa 47502967  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  47502966 atttatgtccatc 47502954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 52803114 - 52802805
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| |||||||||||||  || |||||||||| ||| ||||||||||||| || || ||||||||| |||||||||| |||||||||||||| ||||||    
T  52803114 cgaactccctgaaccatctcccctccgacctctaccc-tctttgggatgtggccgctctgcctctccctccggtggctctgagtcatcgcacgcctacca 52803016  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctaga-------agnnnnnnnnttaacatcatttccataacctaatcaaacacattc 193  Q
    || |||||||||||||||||||  |||| |||||| | |||||||| |       |         ||||||||||||||||||||||||||||||||||     
T  52803015 ccaatcatcttagatggatcaatggggtcctgatcggccatatctacacacaaaaaataataaaattaacatcatttccataacctaatcaaacacatta 52802916  T
Q  194 aacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaata 293  Q
    ||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  52802915 aacctacgctaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacataaaatcattcaatataatcatcattacaata 52802816  T
Q  294 aaattgatgtc 304  Q
    ||||| |||||    
T  52802815 aaatttatgtc 52802805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 2424305 - 2424612
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||| ||||  || |||||||||| |||||||||||||||||  | || | ||||||| |||||||||| || |||||||| || |||||||| ||    
T  2424305 tccctgaatcatctcccctccgacctctacccctctttgggatgtgggcgctctacctctccctccggtggctctgggtcatcgctcgcctaccaccaat 2424404  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    ||| |||||||||||||  ||||  || || | |||||||| |     |         ||| |||||||||||||||||||||||||||||| |||||||    
T  2424405 cattttagatggatcaatggggtcatggtcggccatatctacacaaaaaataataaaattagcatcatttccataacctaatcaaacacattaaacctaa 2424504  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  2424505 actaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaattta 2424604  T
Q  301 tgtccatc 308  Q
    | ||||||    
T  2424605 tatccatc 2424612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 19524289 - 19524590
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||| ||||||||||||| || || ||||||||  ||||||||||||| ||||||||||| |||||||| ||    
T  19524289 tccctgaaccatctcccctccgacctctccccttctttgggatgtggccgctctgcctctctctccggtggctttgggtcatcgcacgcctaccaccaat 19524388  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    ||| |||||||||||||  |||| |||||| | |||||||| |     |         |||||||||||||||||||||||| ||||||||| |||||||    
T  19524389 cattttagatggatcaatggggtcctgatcggccatatctacacaaaaaataataaaattaacatcatttccataacctaataaaacacattaaacctaa 19524488  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||      | ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |    
T  19524489 actaaacataa------taaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcaacattacaataaaattta 19524582  T
Q  301 tgtccatc 308  Q
    ||||||||    
T  19524583 tgtccatc 19524590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 38126597 - 38126741
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38126597 cgaagtccctgaaccatccccct-ccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgcctacca 38126695  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    || ||||||||||||||||||||||||||||||||| |||||||||    
T  38126696 ccaatcatcttagatggatcaaccgggttctgatcaaacatatcta 38126741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 19525137 - 19525438
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||| ||||||||||||| || || ||||||||  ||||||||||||| ||||||||||| |||||||| ||    
T  19525137 tccctgaaccatctcccctccgacctctacccttctttgggatgtggccgctctgcctctctctccggtggctttgggtcatcgcacgcctaccaccaat 19525236  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    ||| |||||||||||||  |  | |||||| | |||||||| |     |         |||||||||||||||||||||||| ||||||||| |||||||    
T  19525237 cattttagatggatcaatggattcctgatcggccatatctacacaaaaaataataaaattaacatcatttccataacctaataaaacacattaaacctaa 19525336  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||      | ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |    
T  19525337 actaaacataa------taaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcaacattacaataaaattta 19525430  T
Q  301 tgtccatc 308  Q
    ||||||||    
T  19525431 tgtccatc 19525438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 19525798 - 19526099
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||| ||||||||||||| || || ||||||||  ||||||||||||| ||||||||||| |||||||| ||    
T  19525798 tccctgaaccatctcccctccgacctctacccttctttgggatgtggccgctctgcctctctctccggtggctttgggtcatcgcacgcctaccaccaat 19525897  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    ||| |||||||||||||  |  | |||||| | |||||||| |     |         |||||||||||||||||||||||| ||||||||| |||||||    
T  19525898 cattttagatggatcaatggattcctgatcggccatatctacacaaaaaataataaaattaacatcatttccataacctaataaaacacattaaacctaa 19525997  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||      | ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |    
T  19525998 actaaacataa------taaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcaacattacaataaaattta 19526091  T
Q  301 tgtccatc 308  Q
    ||||||||    
T  19526092 tgtccatc 19526099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 19526272 - 19526573
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||| ||||||||||||| || || ||||||||  ||||||||||||| ||||||||||| |||||||| ||    
T  19526272 tccctgaaccatctcccctccgacctctacccttctttgggatgtggccgctctgcctctctctccggtggctttgggtcatcgcacgcctaccaccaat 19526371  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    ||| |||||||||||||  |  | |||||| | |||||||| |     |         |||||||||||||||||||||||| ||||||||| |||||||    
T  19526372 cattttagatggatcaatggattcctgatcggccatatctacacaaaaaataataaaattaacatcatttccataacctaataaaacacattaaacctaa 19526471  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||      | ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |    
T  19526472 actaaacataa------taaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcaacattacaataaaattta 19526565  T
Q  301 tgtccatc 308  Q
    ||||||||    
T  19526566 tgtccatc 19526573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 47656827 - 47656682
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    ||||||||||||| |||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47656827 cgaagtccctgaatcatcccacctccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgcctacca 47656728  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    || |||||||||| ||||||||||||||||||||||||||||||||    
T  47656727 ccaatcatcttagctggatcaaccgggttctgatcagacatatcta 47656682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 188 - 306
Target Start/End: Original strand, 49857281 - 49857399
Alignment:
Q  188 acattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcatt 287  Q
    ||||| ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49857281 acattaaacctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcatt 49857380  T
Q  288 acaataaaattgatgtcca 306  Q
     |||||||||| |||||||    
T  49857381 gcaataaaatttatgtcca 49857399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 298
Target Start/End: Complemental strand, 22525195 - 22524910
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  ||||||||||||| |||||||||||||||||  | || ||||||||| | |||||||| |  |||||||| || |||||||| ||    
T  22525195 tccctgaaccatctcccttccgacctctacccctctttgggatgtggacgctctgcctctcccttcggtggctcttggtcatcgctcgcctaccaccaat 22525096  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||  ||||||||| ||  || | ||| || | |||||||| |     |         ||| ||||||||||||||||||||||||||||||            
T  22525095 cattctagatggattaatgggatcctggtcggccatatctacagaaaaaataataaaattagcatcatttccataacctaatcaaacacatt-------- 22525004  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaatt 298  Q
       ||||||||||| |||||||||  |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  22525003 ---aaacataaacataatcaaactccttaaaagtacaacaatgaacatcatttc-ataacctaaaatcattcaatataatcatcattacaataaaatt 22524910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 97018 - 97158
Alignment:
Q  6 tccctgaaccatc-caccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccaccta 104  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||| || || ||||||||| |||||||||| |||||||||||||  |||||||| |    
T  97018 tccctgaaccatctcacc-tccgacctctacccctctttgggatgtggccgctctgcctctccctccggtggctctgagtcatcgcacacctaccaccaa 97116  T
Q  105 tcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    ||||||||||||||||||  |||| |||||||| ||||||||    
T  97117 tcatcttagatggatcaatggggtcctgatcagccatatcta 97158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 50343083 - 50343228
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| |||| ||||| ||||||||||||||||| || ||||||| |||| |||||||||| ||||||||||||   ||||||    
T  50343083 cgaactccctgaaccatccaccctccggcctctacccctctttgggatgtggccgctttgccgctccctccggtggctctgagtcatcgcagacctacca 50343182  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    || |||||||||||||||||||  |||| |||||| | ||||||||    
T  50343183 ccaatcatcttagatggatcaatggggtcctgatcggccatatcta 50343228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 49857061 - 49857277
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||  || |||||||||||||||||||| |||||||||| ||||||  ||||||||| |||||||| |||||| |||| ||| |||    
T  49857061 gaagtccctgaaccatctcccctccgacctcttcccctctttaggatgtgcccgctttgc--ctccttccgatggctttgggtcatcacacgcctatcac 49857158  T
Q  102 ctatcatcttagatggatcaaccgggttctgatcagacatatct------agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    | |||||||||||||||||||  ||||  ||||| | |||||||      | ||         | |||||||||||||||||||||| ||||||||| ||    
T  49857159 caatcatcttagatggatcaatggggtcttgatcggccatatctacacaaaaaataaaaaaaataaacatcatttccataacctaataaaacacattaaa 49857258  T
Q  196 cctaaactaaacataaaca 214  Q
    |||| ||||||||||||||    
T  49857259 cctagactaaacataaaca 49857277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 30890973 - 30890778
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| || || || |||||||| |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||     
T  30890973 tccgacctctacccctctttgggatgtggccgctctgtctctccttgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaat 30890874  T
Q  124 cgggttctgatcagacatatct-----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaaca 214  Q
     | || |||||| | |||||||     | ||         ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  30890873 ggagtcctgatcggccatatctacaaaaaaaaaaaaaaaattaacatcatttcaataacctaatcaaacacattaaacctaaactaaacataaaca 30890778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 11196424 - 11196351
Alignment:
Q  234 tacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccat 307  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  11196424 tacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaatttatgtccat 11196351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 19156975 - 19156877
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaa 122  Q
    |||||||||| ||||||||||||||||| || || ||||||||| |||||||||| |||||||||||||| |||||||| |||||||| ||||||||||    
T  19156975 tccgacctctacccctctttgggatgtggccgctctgcctctccctccggtggctctgagtcatcgcacgcctaccaccaatcatctttgatggatcaa 19156877  T

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Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 21141831 - 21141746
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgca 91  Q
    ||||||||||||||||| || ||||||| ||||||||||||||||| ||||||||||||||| |||||||||| | ||||||||||    
T  21141831 tccctgaaccatccaccctcagacctctacccctctttgggatgtggccactttgcctctccctccggtggctctaagtcatcgca 21141746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 19524716 - 19524777
Alignment:
Q  247 atcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  19524716 atcatttccataacctaaaatcattcaatataatcaacattacaataaaatttatgtccatc 19524777  T

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Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 19524903 - 19524964
Alignment:
Q  247 atcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  19524903 atcatttccataacctaaaatcattcaatataatcaacattacaataaaatttatgtccatc 19524964  T

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Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 19525564 - 19525625
Alignment:
Q  247 atcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  19525564 atcatttccataacctaaaatcattcaatataatcaacattacaataaaatttatgtccatc 19525625  T

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Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 19526699 - 19526760
Alignment:
Q  247 atcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  19526699 atcatttccataacctaaaatcattcaatataatcaacattacaataaaatttatgtccatc 19526760  T

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Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 13639118 - 13639241
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctct-ccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaa 122  Q
    |||||||||| ||||||||||||||||| || || || |||| || | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||    
T  13639118 tccgacctctacccctctttgggatgtggccgctctgtctctcccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaa 13639217  T
Q  123 ccgggttctgatcagacatatcta 146  Q
      |||| |||||| | ||||||||    
T  13639218 tggggtcctgatcggccatatcta 13639241  T

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Target: chr1; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 3731478 - 3731600
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  || | || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  3731478 tccgacctctacccctctttgggatgtgggcaatctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 3731577  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  3731578 ggggtcctgatcggccatatcta 3731600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 26876618 - 26876496
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | || ||||| |||||||| ||||| |||||||| |||||||| ||||||| ||     
T  26876618 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcgttggctctgagtcatggcacgcctaccaccaatcatcttcgatggataaat 26876519  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  26876518 ggggtcctgatcggccatatcta 26876496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 19526886 - 19526947
Alignment:
Q  247 atcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||| |||||||||    
T  19526886 atcatttccataacttaaaatcattcaatataatcaacattacaataaaatttatgtccatc 19526947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 2366153 - 2366077
Alignment:
Q  59 tgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccgggttctgatc 135  Q
    ||||||||| | |||||||| |||||||| ||||| |||||||| ||||||| |||||||||||  |||| ||||||    
T  2366153 tgcctctccctacggtggctatgagtcatggcacgcctaccaccaatcatctgagatggatcaatggggtcctgatc 2366077  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 30890706 - 30890674
Alignment:
Q  184 aaacacattcaacctaaactaaacataaacaaa 216  Q
    ||||||||| |||||||||||||||||||||||    
T  30890706 aaacacattaaacctaaactaaacataaacaaa 30890674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 34822107 - 34822420
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  34822107 cgaagtccctgaaccatccaccctccgacctcttcccctctttgggatgtgcccgctttgcctctccttccggtggctttgagtcatcgcacgcctacca 34822206  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatct------agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattca 194  Q
    | |||||||||||||||||||||||||||||||||||||||||||      | ||         |||||||||||||||||||||||||||||| ||| |    
T  34822207 catatcatcttagatggatcaaccgggttctgatcagacatatctacaaaaacaaaattaaaaattaacatcatttccataacctaatcaaacaaattaa 34822306  T
Q  195 acctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataa 294  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  34822307 acctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaacatcattttcataacctaaaatcattcaatataatcatcattacaataa 34822406  T
Q  295 aattgatgtccatc 308  Q
    |||| |||||||||    
T  34822407 aatttatgtccatc 34822420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 40076348 - 40076663
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||||||||||||||||||||| |||||||||||||||| ||||| |||||||  |||||||||||||| |||||||||||||||||| |||| ||||||    
T  40076348 cgaagtccctgaaccatccaccctccgacctcttcccctatttggaatgtgcctgctttgcctctcctttcggtggctttgagtcatcacacgcctacca 40076447  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctaga--------agnnnnnnnnttaacatcatttccataacctaatcaaacacatt 192  Q
    || ||||| ||||||||||||||| | ||||||||||||||||||| |        |         ||||||||||||||||||||||||||||||||||    
T  40076448 ccaatcattttagatggatcaaccagattctgatcagacatatctacacaaaaaaaaaaaaaaaaattaacatcatttccataacctaatcaaacacatt 40076547  T
Q  193 caacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaat 292  Q
     ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40076548 aaacctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaat 40076647  T
Q  293 aaaattgatgtccatc 308  Q
    |||||| |||||||||    
T  40076648 aaaatttatgtccatc 40076663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 5303331 - 5303643
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  5303331 cgaactccctgaaccatccaccctccgacctcttctcatctttgggatgtgcccgctttgcctctccttccggtggctttgagtcatcgcacgcctacca 5303430  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatct-----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    || |||||||||||| |||||||||||||||||||||||||||||     | ||         |||||||||||||||||| ||||||||||||||| ||    
T  5303431 ccaatcatcttagatagatcaaccgggttctgatcagacatatctacacaaaaaattaaaaatttaacatcatttccataagctaatcaaacacattaaa 5303530  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    || |||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| |||| |||||||||| ||| ||||||||||||||||||     
T  5303531 ccaaaactaaacataaacataatcaaacatattaaaagtacaacaatgaacatcatttccgtaacttaaaatcattcaatttaatcatcattacaataac 5303630  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  5303631 atttatgtccatc 5303643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 24 - 308
Target Start/End: Original strand, 15035842 - 15036131
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| || || ||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||||||||     
T  15035842 tccgacctctacccctctttgggatgtggccgctctgcctctccctccggtggctctgagtcatcgcacgcctaccaccaatcatcttagatggatcaat 15035941  T
Q  124 cgggttctgatcagacatatctagaagnnnnnnnnt-----taacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaat 218  Q
     |||| |||||| | |||||||| ||         |     ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15035942 ggggtcctgatcggccatatctacaaaacaaaaaataaaattaatatcattttcataacctaatcaaacacattcaacctaaactaaacataaacaaaat 15036041  T
Q  219 caaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15036042 caaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaatttatgtccatc 15036131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 6 - 308
Target Start/End: Complemental strand, 39252976 - 39252672
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||||||||| || || ||||||||| || ||||||| |||||||| |||||||||||||| ||    
T  39252976 tccctgaaccatctcccctccgacctctacccctctttgggatgtggccgctctgcctctccctctggtggctctgagtcattgcacgtctaccaccaat 39252877  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga---agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaac 202  Q
    |||||||||||||||||  |||| |||||| | |||||||| |   |         |||||||||||||||||||||||||||||||||| |||||||||    
T  39252876 catcttagatggatcaatggggtcctgatcggccatatctacacaaaataataaaattaacatcatttccataacctaatcaaacacattaaacctaaac 39252777  T
Q  203 taaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatg 302  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  39252776 taaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatca-ttaatataatcatcattacaataaaatttatg 39252678  T
Q  303 tccatc 308  Q
    ||||||    
T  39252677 tccatc 39252672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 6 - 308
Target Start/End: Complemental strand, 43212482 - 43212175
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||||||||| || || ||||||||| |||||||||| |||||||||||||  |||||||| ||    
T  43212482 tccctgaaccatctcccctccgacctctacccctctttgggatgtggccgctctgcctctccctccggtggctctgagtcatcgcacacctaccaccaat 43212383  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||||||||||||||||  |||| |||||| | |||||||| |     |         |||||||||| | ||||||||||||||||||||| |||||||    
T  43212382 catcttagatggatcaatggggtcctgatcggccatatctacacaaaaaataataaaattaacatcatcttcataacctaatcaaacacattaaacctaa 43212283  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  43212282 actaaacataaacataatcaaactcattaaaagcacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaattta 43212183  T
Q  301 tgtccatc 308  Q
    ||||||||    
T  43212182 tgtccatc 43212175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 41249204 - 41249511
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    ||||||||| |||  || |||||||||| || |||||||||||||| || || ||||||||| ||||||||||||| ||||||||||| |||||||| ||    
T  41249204 tccctgaactatctcccctccgacctctacctctctttgggatgtggccgctctgcctctccctccggtggctttgggtcatcgcacgcctaccaccaat 41249303  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    ||| |||||||||||||  |||| |||||| | |||||||| |     |         |||||||||||||||||||||||| ||||||||| |||||||    
T  41249304 cattttagatggatcaatggggtcctgatcggccatatctacacaaaaaataataaaattaacatcatttccataacctaattaaacacattaaacctaa 41249403  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  41249404 actaaacataaacataatcaaactcattaaaagtacagcaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaattta 41249503  T
Q  301 tgtccatc 308  Q
    ||||||||    
T  41249504 tgtccatc 41249511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 6 - 294
Target Start/End: Complemental strand, 39602564 - 39602271
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    ||||| |||||||  || |||||||||| ||||||||||||||||| || || ||||||||| |||||||||| |||||||||||||| |||||||| ||    
T  39602564 tcccttaaccatctcccctccgacctctacccctctttgggatgtggccgctctgcctctccctccggtggctctgagtcatcgcacgcctaccaccaat 39602465  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||||||||||||||||  |||| |||||| | |||| ||| |     |         ||||||||||||| |||||||||||||||||||| |||||||    
T  39602464 catcttagatggatcaatggggtcctgatcggccatacctacacaaaaaataataaaattaacatcatttcgataacctaatcaaacacattaaacctaa 39602365  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataa 294  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39602364 actaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataa 39602271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 39846089 - 39846403
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctcct--tccggtggctttgagtcatcgcacgtctac 98  Q
    |||| ||||||||||||||||  | |||||| | ||||||||||||||||| || ||||||||||| |  |||| ||||| |||||||| ||||| ||||    
T  39846089 cgaactccctgaaccatccacactacgacctttacccctctttgggatgtggccgctttgcctctcttcctccgatggctctgagtcattgcacgcctac 39846188  T
Q  99 cacctatcatcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattc 193  Q
    |||| |||||||||||||||||||   ||| |||||| | |||||||| |     |         |||||||||||||||||||||||||||||| |||     
T  39846189 caccaatcatcttagatggatcaatgaggtcctgatcggccatatctacacaaaaaataataaaattaacatcatttccataacctaatcaaacaaatta 39846288  T
Q  194 aacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaata 293  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39846289 aacctaaactaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaata 39846388  T
Q  294 aaattgatgtccatc 308  Q
    ||||  |||||||||    
T  39846389 aaatgtatgtccatc 39846403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 41 - 304
Target Start/End: Complemental strand, 45065174 - 45064904
Alignment:
Q  41 tttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccgggttctgatcagaca 140  Q
    ||||||||||| || || ||||||||| ||||||| || |||||||||||||| |||||||| |||||||||||||||||||  |||| |||||||| ||    
T  45065174 tttgggatgtggccgctctgcctctccctccggtgactctgagtcatcgcacgcctaccaccaatcatcttagatggatcaatggggtcctgatcagcca 45065075  T
Q  141 tatctagaagnnnnnnnn--ttaacatcatttccataacctaatcaaacacattcaacctaaactaaac-----ataaacaaaatcaaactgattaaaag 233  Q
    |||||| ||           ||||||||||||| |||||||||||||||||||| ||||||||||||||     ||||||||||| ||||| ||||||||    
T  45065074 tatctacaaaaaaaaaaaaattaacatcatttctataacctaatcaaacacattaaacctaaactaaactaaacataaacaaaattaaactcattaaaag 45064975  T
Q  234 tacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45064974 tacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaatttatgtc 45064904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 43189029 - 43188718
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||| ||||||||||||| |||||||||| ||| ||||||||||||| || |||||||||||| |||  ||||| |||||||| ||||| ||||||    
T  43189029 cgaattccatgaaccatccaccctccgacctctacccttctttgggatgtggccgctttgcctctccatccc-tggctctgagtcattgcacgcctacca 43188931  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatct-----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    || |||||||||||||||||||  | || |||||| | |||||||     | ||         ||||||| |||| ||||||||||||||||||||| ||    
T  43188930 ccaatcatcttagatggatcaatggagtcctgatcggccatatcttcacaaaaaattaaaaaattaacattattttcataacctaatcaaacacattaaa 43188831  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    ||||||||||||||||||| ||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  43188830 cctaaactaaacataaacataatcaaacacattgaaagtacaacaatgaacatcattttcataacctaaaatcattcaaaataatcatcattacaataaa 43188731  T
Q  296 attgatgtccatc 308  Q
    ||| |||| ||||    
T  43188730 atttatgttcatc 43188718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 35552624 - 35552479
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  35552624 cgaagtccctgaaccatcccccctccgacctcttcccctctttgggatgtgcccgctttgcctcttcttccggtggctttgagtcatcgcacgtctacca 35552525  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    || ||||||||||||||||||||| |||||||||||||||||||||    
T  35552524 ccaatcatcttagatggatcaaccaggttctgatcagacatatcta 35552479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 39938315 - 39938621
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||||| ||| || || | ||||||| ||||||| || ||||||||| |||| |||||||| ||    
T  39938315 tccctgaaccatctcccctccgacctctacccctctttgggacgtggccgctctacctctccctccggtgactctgagtcatcacacgcctaccaccaat 39938414  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||||||||||||||||  || | |||||| | | |||||| |     |         |||||||||||| ||||||||||||||||||||| ||| |||    
T  39938415 catcttagatggatcaatgggatcctgatcggcc-tatctacacaaaaaataataaaattaacatcattttcataacctaatcaaacacattaaacataa 39938513  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||| |    
T  39938514 actaaacataaacataagcaaactcattaaaagtacaacaatgaacatcatttccataacctaaattcattcaatataatcaacattacaataaaattta 39938613  T
Q  301 tgtccatc 308  Q
    | ||||||    
T  39938614 tttccatc 39938621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 20858239 - 20858099
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||| |||||||| ||    
T  20858239 tccctgaaccatccactctccgacctcttcccctctttgggatgtgaccgctttgcctctccctccggtggctctgagtcatcgcacgcctaccaccaat 20858140  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    |||||||||||||||||  ||||||||||| | ||||||||    
T  20858139 catcttagatggatcaatggggttctgatcggccatatcta 20858099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 37327803 - 37327660
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||||||| ||||||||||| ||||| || || |||||||||||||| ||| |||    
T  37327803 gaagtccctgaaccatcccccctccgacctctacccctctttgggatgtgccc-ctttgcctctctttccgatgactctgagtcatcgcacgcctatcac 37327705  T
Q  102 ctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    | ||||||||||||||||||| |||||  || |||||||||||||    
T  37327704 caatcatcttagatggatcaatcgggtcatgctcagacatatcta 37327660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 5678009 - 5677897
Alignment:
Q  10 tgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatc 109  Q
    |||||||||| || ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||| ||||||||||  |||||||| ||||||    
T  5678009 tgaaccatcccccctccgacctcttcccctctttgggatgttcccgctttacctctccttccggtggctttgtgtcatcgcacacctaccaccaatcatc 5677910  T
Q  110 ttagatggatcaa 122  Q
    |||||||||||||    
T  5677909 ttagatggatcaa 5677897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 45128698 - 45128577
Alignment:
Q  2 gaagtccctgaaccat-ccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    ||||| |||||||||| || || || |||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| |||| ||| ||    
T  45128698 gaagtacctgaaccattcccccctctgacctcttcccctctttgggatgtgcccgccttgcctctccttccggtggctttgtgtcatctcacgcctatca 45128599  T
Q  101 cctatcatcttagatggatcaa 122  Q
    || |||||||||||||||||||    
T  45128598 ccaatcatcttagatggatcaa 45128577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 34369634 - 34369750
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| |||||||||||||||||  | || ||||||||| ||||||| || |||||||||||||| |||||||| ||    
T  34369634 tccctgaaccatctcccctccgacctctacccctctttgggatgtggtcgctctgcctctccctccggtgactctgagtcatcgcacgcctaccaccaat 34369733  T
Q  106 catcttagatggatcaa 122  Q
    |||||||||||||||||    
T  34369734 catcttagatggatcaa 34369750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 34370962 - 34371078
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| |||||||||||||||||  | || ||||||||| ||||||| || |||||||||||||| |||||||| ||    
T  34370962 tccctgaaccatctcccctccgacctctacccctctttgggatgtggtcgctctgcctctccctccggtgactctgagtcatcgcacgcctaccaccaat 34371061  T
Q  106 catcttagatggatcaa 122  Q
    |||||||||||||||||    
T  34371062 catcttagatggatcaa 34371078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 24 - 214
Target Start/End: Original strand, 42484697 - 42484891
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| ||  | || |||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||     
T  42484697 tccgacctctacccctctttgggatgtggccgttctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaat 42484796  T
Q  124 cgggttctgatcagacatatct----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaaca 214  Q
     |||| |||||| | |||||||    | ||         ||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  42484797 ggggtcctgatcggccatatctacaaaaaaaaaaaaaaattaacatcatttcaataacataatcaaacacattaaacctaaactaaacataaaca 42484891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 2985100 - 2984875
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||| || ||||||||||||||||||| || || ||  |  ||| ||||| |||| | |||||||| |||||  |||| |||||||    
T  2985100 gaagtccctgaaccatcccccctccgacctcttcccctcttcggtatttgtgcgtttttcctcttcttctgatggctttgtgtcataccacgcctaccac 2985001  T
Q  102 ctatcatcttagatggatcaa---------ccgggttctgatcagacatatctaga----agnnnnnnnnttaacatcatttccataacctaatcaaaca 188  Q
    | |||||||||||||||||||         || ||| ||||||||||||||||| |    |         ||||||||||||||||||||||||||||||    
T  2985000 caatcatcttagatggatcaatcagctgcccctggtcctgatcagacatatctacacaaaaaattaaaaattaacatcatttccataacctaatcaaaca 2984901  T
Q  189 cattcaacctaaactaaacataaaca 214  Q
    |||| |||||||||||||||||||||    
T  2984900 cattaaacctaaactaaacataaaca 2984875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 488816 - 489013
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  488816 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 488915  T
Q  124 cgggttctgatcagacatatcta--------gaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaac 213  Q
     |||| |||||| | ||||||||         ||         |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  488916 ggggtcctgatcggccatatctacaaaaaataaaaataaaaaattaatatcatttcaataacctaatcaaacacattaaacctaaactaaacataaac 489013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 1053500 - 1053378
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  1053500 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 1053401  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  1053400 ggggtcctgatcggccatatcta 1053378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 23021418 - 23021540
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  23021418 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 23021517  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  23021518 ggggtcctgatcggccatatcta 23021540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 26660422 - 26660300
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  26660422 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 26660323  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  26660322 ggggtcctgatcggccatatcta 26660300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 24635 - 24757
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  || | || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  24635 tccgacctctacccctctttgggatgtgggcaatctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 24734  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  24735 ggggtcctgatcggccatatcta 24757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 203 - 298
Target Start/End: Complemental strand, 2984850 - 2984758
Alignment:
Q  203 taaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaatt 298  Q
    |||||||||||| ||||||||  ||||||| |    |||||||||||||||||||||||||||| ||||  |||||||||||||| ||||| ||||    
T  2984850 taaacataaacataatcaaacacattaaaatt---ccaatgaacatcatttccataacctaaaaccattccatataatcatcatttcaatataatt 2984758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 45128530 - 45128489
Alignment:
Q  161 aacatcatttccataacctaatcaaacacattcaacctaaac 202  Q
    |||||||||||||||||||||||||| ||||| ||| |||||    
T  45128530 aacatcatttccataacctaatcaaaaacattaaacataaac 45128489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 489057 - 489089
Alignment:
Q  184 aaacacattcaacctaaactaaacataaacaaa 216  Q
    ||||||||| |||||||||||||||||||||||    
T  489057 aaacacattaaacctaaactaaacataaacaaa 489089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 42757133 - 42756820
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||    
T  42757133 cgaagtccctgaaccatccaccctccgacctcttcccttctttgggatgtgcccgctttgtctctccttccggtggctttgagtcatcgcacgcctacca 42757034  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatct------agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattca 194  Q
    || ||||||||||||||||||||||||||||||||||||||||||      | ||         |||||||||||||||||||||||||||||||||| |    
T  42757033 ccaatcatcttagatggatcaaccgggttctgatcagacatatctacacaaaaaataaaaaaaattaacatcatttccataacctaatcaaacacattaa 42756934  T
Q  195 acctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataa 294  Q
    ||||||||||||||||||||   |  |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42756933 acctaaactaaacataaacattttttaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataa 42756834  T
Q  295 aattgatgtccatc 308  Q
    |||| |||||||||    
T  42756833 aatttatgtccatc 42756820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 49195557 - 49195869
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||||| ||||||    
T  49195557 cgaactccctgaaccatccaccctccgacctcttcccctctttgggatgtgcccgctttcgctctccttccggtggctctgagtcatcgcacgcctacca 49195656  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctagaagnnnnnnnn-----ttaacatcatttccataacctaatcaaacacattcaa 195  Q
     | ||||||||||||||||||||||| ||||||||||||||||||| |               ||||||||||||||||||||||||||||||| || ||    
T  49195657 gcaatcatcttagatggatcaaccggattctgatcagacatatctacacaaaatttttaaaaattaacatcatttccataacctaatcaaacacgttaaa 49195756  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49195757 cctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaa 49195856  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  49195857 atttatgtccatc 49195869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 20917108 - 20917419
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  20917108 cgaagtccctgaaccatccacccttcgacctcttcccctctttgggatgtgcccgctttgcctctccttccggtggctctgagtcatcgcacgcctacca 20917207  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatct-----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
     | |||||||||||||||||||||||||||| |||||||||||||     | ||         |||||||||||||||||| ||||||||||||||| ||    
T  20917208 gcaatcatcttagatggatcaaccgggttcttatcagacatatctacacaaaaaaaaaaaaaattaacatcatttccataa-ctaatcaaacacattaaa 20917306  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    |||||||||||||||| ||  |||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  20917307 cctaaactaaacataagcatgatcaaacacattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattgcaataaa 20917406  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  20917407 atttatgtccatc 20917419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 20926070 - 20926381
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  20926070 cgaagtccctgaaccatccacccttcgacctcttcccctctttgggatgtgcccgctttgcctctccttccggtggctctgagtcatcgcacgcctacca 20926169  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatct-----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
     | |||||||||||||||||||||||||||| |||||||||||||     | ||         |||||||||||||||||| ||||||||||||||| ||    
T  20926170 gcaatcatcttagatggatcaaccgggttcttatcagacatatctacacaaaaaaaaaaaaaattaacatcatttccataa-ctaatcaaacacattaaa 20926268  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    |||||||||||||||| ||  |||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  20926269 cctaaactaaacataagcatgatcaaacacattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattgcaataaa 20926368  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  20926369 atttatgtccatc 20926381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 6 - 306
Target Start/End: Complemental strand, 3976683 - 3976378
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  |  |||||||||| ||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||| |||||||| ||    
T  3976683 tccctgaaccatctcctctccgacctctacccctctttgggatgtggccactctgcctctccctccggtggctctgagtcatcgcacgcctaccaccaat 3976584  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||||||||||||||||  |||| |||||| | |||||||| |     |         |||||||||||||||||||||||||||||||||| |||||||    
T  3976583 catcttagatggatcaatggggtcctgatcggccatatctacacaaaaaataataaaattaacatcatttccataacctaatcaaacacattaaacctaa 3976484  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  3976483 actaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaattta 3976384  T
Q  301 tgtcca 306  Q
    ||||||    
T  3976383 tgtcca 3976378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 49268360 - 49268672
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| |||||||||| ||||| ||||||||||| || |||||||||||| |||||||||| |||||||||||||| ||||||    
T  49268360 cgaactccctgaaccatccaccctccgacctctacccctgtttgggatgtgaccgctttgcctctccctccggtggctctgagtcatcgcacgcctacca 49268459  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    || |||||||||||||||||||  | || |||||| | |||||||| |     |         |||||||||||| ||||||||||||||||||||| ||    
T  49268460 ccaatcatcttagatggatcaatggagtcctgatcggccatatctacacacaaaataataaaattaacatcattttcataacctaatcaaacacattaaa 49268559  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |    
T  49268560 cctaaactaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaattta 49268659  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  49268660 atttatgtccatc 49268672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 10 - 308
Target Start/End: Complemental strand, 48563903 - 48563596
Alignment:
Q  10 tgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatc 109  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| ||||||    
T  48563903 tgaaccatccaccctccgacctcttcccctatttgggatgtgcccgctttgcctctccttccggtggctttgagttatcgcatgcctaccaccaatcatc 48563804  T
Q  110 ttagatggatcaaccgggttctgatcagacatatctaga---------agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||||||||| | ||| |||||||||| | ||||||| |         |         |||||||||||||||||||||||||||||||||| |||||||    
T  48563803 ttagatggattacccgagttctgatcataaatatctacacaaaaaaaaaattaaaaaattaacatcatttccataacctaatcaaacacattaaacctaa 48563704  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |    
T  48563703 actaaacataaacataatcaaacacattaaaagtacaacaatgaacatcatttccataacttaaaatcattcaatataatcatcattacaataaaattta 48563604  T
Q  301 tgtccatc 308  Q
    || |||||    
T  48563603 tgcccatc 48563596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 2 - 308
Target Start/End: Original strand, 30255095 - 30255406
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||  || |||||||||||||| |||||||||||||||||||||||||||||||||  |||||||| ||||||||||  |||||||    
T  30255095 gaagtccctgaaccatctcccctccgacctcttcccttctttgggatgtgcccactttgcctctccttccaatggctttgggtcatcgcacacctaccac 30255194  T
Q  102 ctatcatcttagatggatcaaccgggttctgatcagacatatct-----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaac 196  Q
    | |||||||||||||||||||  |||| |||||| | |||||||     | ||         |||||||||||||||||||||||||||||||||| |||    
T  30255195 caatcatcttagatggatcaatggggtcctgatcggtcatatctgcacaaaaaattaaaaaattaacatcatttccataacctaatcaaacacattaaac 30255294  T
Q  197 ctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaa 296  Q
    ||||||||||||||||||  ||  |||  ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  30255295 ctaaactaaacataaacatcatttaacacattaaaagtacaacaatgaacatcatttccataacctaaaatcattcgatataatcatcattacaataaaa 30255394  T
Q  297 ttgatgtccatc 308  Q
    || |||||||||    
T  30255395 tttatgtccatc 30255406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 6 - 304
Target Start/End: Complemental strand, 50963934 - 50963631
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||||||||| || || ||||||||| |||||| ||| |||||||||||||| |||||||| ||    
T  50963934 tccctgaaccatctcccctccgacctctacccctctttgggatgtggccgctctgcctctccctccggtagctctgagtcatcgcacgcctaccaccaat 50963835  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||||||||||||||||  |||| ||||||   |||||||| |     |         |||||||||||||||||||||||||||||||||| |||||||    
T  50963834 catcttagatggatcaatggggtcctgatcgaccatatctacacaaaaaataataaaattaacatcatttccataacctaatcaaacacattaaacctaa 50963735  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  50963734 actaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaattta 50963635  T
Q  301 tgtc 304  Q
    ||||    
T  50963634 tgtc 50963631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 24 - 308
Target Start/End: Complemental strand, 42166122 - 42165832
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| || || ||||||||| || ||||||| |||||||||| ||| |||||||| |||||||||||||||||||     
T  42166122 tccgacctctacccctctttgggatgtggccgctctgcctctccctctggtggctctgagtcatcgtacgcctaccaccaatcatcttagatggatcaat 42166023  T
Q  124 cgggttctgatcagacatatctaga------agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaa 217  Q
     |||| |||||| | |||||||| |      |         |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  42166022 ggggtcctgatcggccatatctacacaaaaaaataataaaattaacatcatttccataacctaatcaaacacattaaacctaaactaaacataaacataa 42165923  T
Q  218 tcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  42165922 tcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaatttatgtccatc 42165832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 44230683 - 44230383
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||| ||| |||||||| || || | ||||    
T  44230683 cgaactccctgaaccatccaccctccgacctcttcccctctttgggatgtgcccgctttgcctctccctccggttgctctgagtcattgctcgccgacca 44230584  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctagaagnnnnnnnnt-----taacatcatttccataacctaatcaaacacattcaa 195  Q
     | ||||| ||||||||||||||||||||||||||||||||||||| |          |     ||||||||||||||||||||||||||||||||        
T  44230583 gcaatcattttagatggatcaaccgggttctgatcagacatatctacacaattttttttaaaactaacatcatttccataacctaatcaaacacat---- 44230488  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
           |||||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44230487 -------taaacataaacataatcaaacacattaaaagtacaacattgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaa 44230395  T
Q  296 attgatgtccat 307  Q
    ||| ||||||||    
T  44230394 atttatgtccat 44230383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 59 - 308
Target Start/End: Original strand, 4007472 - 4007726
Alignment:
Q  59 tgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccgggttctgatcagacatatctaga-----agnnn 153  Q
    ||||||||| |||||||||| |||||||||| ||| |||||||| |||||||||||||||||||  | || |||||| | |||||||| |     |        
T  4007472 tgcctctccatccggtggctctgagtcatcgtacgcctaccaccaatcatcttagatggatcaatggagtcctgatcggccatatctatacaaaaaataa 4007571  T
Q  154 nnnnnttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcattt 253  Q
         |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  4007572 taaaattaacatcatttccataacctaatcaaacacattaaacctaaactaaacataaacataatcaaactcattaaaagtacaacaatgaacatcattt 4007671  T
Q  254 ccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  4007672 ccataacctaaaatcattcaatataatcatcattacaataaaatttatgtccatc 4007726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 6 - 304
Target Start/End: Original strand, 47073303 - 47073606
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||||||||| |  || ||||||||| ||||||| || |||||||||||||  |||| ||| ||    
T  47073303 tccctgaaccatctcccctccgacctctacccctctttgggatgtggctgctctgcctctccctccggtgactctgagtcatcgcacacctactaccaat 47073402  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctagaagnnnnnnnnt-----taacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||||||||||||||||  ||||  ||||| | |||||||| |          |     ||||||||||||||||||||||||||||||||| |||||||    
T  47073403 catcttagatggatcaatggggtcttgatcggccatatctacacaaaaaataataaaactaacatcatttccataacctaatcaaacacattaaacctaa 47073502  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    || ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |    
T  47073503 accaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaatagaattta 47073602  T
Q  301 tgtc 304  Q
    ||||    
T  47073603 tgtc 47073606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 6 - 308
Target Start/End: Complemental strand, 597877 - 597570
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| |||||||||||||||||  | || ||||||||| |||||||||| |  |||||||| || |||||||  ||    
T  597877 tccctgaaccatctcccctccgacctctacccctctttgggatgtgggcgctctgcctctccctccggtggctctaggtcatcgctcgcctaccacaaat 597778  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    ||| |||||||||||||  |||| ||| || | |||||||| |     |         ||| |||||||||||||||||||||||||||||| |||||||    
T  597777 cattttagatggatcaatggggtcctggtcggccatatctacacaaaaaataataaaattagcatcatttccataacctaatcaaacacattaaacctaa 597678  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  597677 actaaacataaacataatcaaactcattaaaagtataacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaattta 597578  T
Q  301 tgtccatc 308  Q
    | ||||||    
T  597577 tatccatc 597570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 9 - 308
Target Start/End: Original strand, 50216036 - 50216343
Alignment:
Q  9 ctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcat 108  Q
    ||||||||||  || |||||||||| ||||||||||||||||| || || ||||| ||| |||| || ||||||||||||||||| |||||||| |||||    
T  50216036 ctgaaccatctcccctccgacctctacccctctttgggatgtggccgctctgcctgtccctccgatgactttgagtcatcgcacgcctaccaccaatcat 50216135  T
Q  109 cttagatggatcaaccgggttctgatcagacatatctaga---------agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaaccta 199  Q
     |||||||||||||  |||| |||||| | |||||||| |         |         ||||||||||||||||||| |||||||||||||| || |||    
T  50216136 tttagatggatcaatggggtcctgatcggccatatctacacaaaaaaaaaaaaaaaaaattaacatcatttccataacataatcaaacacattaaatcta 50216235  T
Q  200 aactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattg 299  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| || ||||||||||||     
T  50216236 aactaaacataaacataatcaaactcactaaaagtacaacaatgaacatcatttccataaccttaaatcattcaatataatcaaca-tacaataaaattt 50216334  T
Q  300 atgtccatc 308  Q
    |||||||||    
T  50216335 atgtccatc 50216343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 159 - 308
Target Start/End: Complemental strand, 48889552 - 48889403
Alignment:
Q  159 ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccata 258  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||  |||||||||| | ||||||||||||||||||||    
T  48889552 ttaacatcatttccataacctaatcaaacacattaaacctaaattaaacataaacataatcaaacacattaaaagtaaagcaatgaacatcatttccata 48889453  T
Q  259 acctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  48889452 acctaaaataattcaatataatcatcattacaataaaatttatgtccatc 48889403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 20351586 - 20351441
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| || ||||||| |||||||||||||| ||||||    
T  20351586 cgaactccctgaaccatccaccctccgacctcttcccctctttgggatgtggccgctttgcctctccctcaggtggctctgagtcatcgcacgcctacca 20351487  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    || |||||||||||||||||||| |||| || ||| | ||||||||    
T  20351486 ccaatcatcttagatggatcaacggggtccttatcggccatatcta 20351441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 17567187 - 17567333
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtcta-cc 99  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||||| || ||||| |||||| |||||||||| |||||||||||||| ||| ||    
T  17567187 cgaactccctgaaccatccaccctccgacctctacccctctttgggatgtggccgctttgactctccctccggtggctctgagtcatcgcacgcctaccc 17567286  T
Q  100 acctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
     || |||||||||||||||||||  ||||||||||| | ||||||||    
T  17567287 cccaatcatcttagatggatcaatggggttctgatcggccatatcta 17567333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 170 - 286
Target Start/End: Complemental strand, 54682171 - 54682060
Alignment:
Q  170 tccataacctaatcaaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatca 269  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| ||     |||||||||||||||| ||||||||||||||||||||    
T  54682171 tccataacctaatcaaacacattaaacttaaactaaacataaacataatcaaactcat-----gtacaacaatgaacattatttccataacctaaaatca 54682077  T
Q  270 tttaatataatcatcat 286  Q
    || ||||||||||||||    
T  54682076 ttcaatataatcatcat 54682060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 41613315 - 41613194
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||| ||||||| |||||||||| ||||||||||||||||| || |||||||||||| |||||||||| |||||||||||| | ||||||    
T  41613315 cgaactccctgaactatccaccatccgacctctacccctctttgggatgtggccgctttgcctctccctccggtggctctgagtcatcgcaggcctacca 41613216  T
Q  101 cctatcatcttagatggatcaa 122  Q
    || |||||||| | ||||||||    
T  41613215 ccaatcatcttgggtggatcaa 41613194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 42805586 - 42805665
Alignment:
Q  229 aaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  42805586 aaaagtacaacaatgaacatcattttcataacctaaaatcattcaatataatcatcattacaataaaatttatgtccatc 42805665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 2274020 - 2274160
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||||||||| || || ||||||||| |||||||||| ||||| |||||||| ||||| || ||    
T  2274020 tccctgaaccatctcccctccgacctctacccctctttgggatgtggccgctctgcctctccctccggtggctctgagttatcgcacgcctacccccaat 2274119  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    ||||||||||| |||||  |||| |||||| | ||||||||    
T  2274120 catcttagatgaatcaatggggtcctgatcggccatatcta 2274160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 36128574 - 36128458
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||||||||| || || ||||||||| ||||||||||  ||||||||||||| |||||||| ||    
T  36128574 tccctgaaccatctcccctccgacctctacccctctttgggatgtggccgctctgcctctccctccggtggctccgagtcatcgcacgcctaccaccaat 36128475  T
Q  106 catcttagatggatcaa 122  Q
    ||||||||||| |||||    
T  36128474 catcttagatgaatcaa 36128458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 146
Target Start/End: Original strand, 52390489 - 52390625
Alignment:
Q  10 tgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatc 109  Q
    |||||||||  || |||||||||| ||||||||||||||||| || || ||| ||||| |||||||||| |||||||||||||  |||||||| ||||||    
T  52390489 tgaaccatctcccctccgacctctacccctctttgggatgtggccgctctgcttctccctccggtggctctgagtcatcgcacacctaccaccaatcatc 52390588  T
Q  110 ttagatggatcaaccgggttctgatcagacatatcta 146  Q
    |||||||||||||  |||| |||||| | ||||||||    
T  52390589 ttagatggatcaatggggtcctgatcggccatatcta 52390625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 16612059 - 16611943
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||| | ||||||||||||||||| || || ||||||| | || ||||||| |||||||||||||| |||||||  ||    
T  16612059 tccctgaaccatctcccctccgacctgtacccctctttgggatgtggccgctctgcctctgcctctggtggctctgagtcatcgcacgcctaccactaat 16611960  T
Q  106 catcttagatggatcaa 122  Q
    |||||||||||||||||    
T  16611959 catcttagatggatcaa 16611943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 22047194 - 22047310
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||| | ||||||||||||||||| || || ||||||| | || ||||||| |||||||||||||| |||||||  ||    
T  22047194 tccctgaaccatctcccctccgacctgtacccctctttgggatgtggccgctctgcctctgcctctggtggctctgagtcatcgcacgcctaccactaat 22047293  T
Q  106 catcttagatggatcaa 122  Q
    |||||||||||||||||    
T  22047294 catcttagatggatcaa 22047310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 29009835 - 29009713
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| || || || |||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||| ||||||     
T  29009835 tccgacctctacccctctttgggatgtggccgctctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgattgatcaat 29009736  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  29009735 ggggtcctgatcggccatatcta 29009713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 42903287 - 42903409
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  42903287 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 42903386  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  42903387 ggggtcctgatcggccatatcta 42903409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 49143560 - 49143682
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  49143560 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 49143659  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  49143660 ggggtcctgatcggccatatcta 49143682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 50479904 - 50480026
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  50479904 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 50480003  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  50480004 ggggtcctgatcggtcatatcta 50480026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 34046351 - 34046229
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||| ||     
T  34046351 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggattaat 34046252  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  34046251 ggggtcctgatcggccatatcta 34046229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 46701123 - 46701245
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  || | || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  46701123 tccgacctctacccctctttgggatgtgggcaatctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 46701222  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  46701223 ggggtcctgatcggccatatcta 46701245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 54387099 - 54386977
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || ||||||   |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  54387099 tccgacctctacccctctttgggatgtgggcactctgtctctccccgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 54387000  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  54386999 ggggtcctgatcggccatatcta 54386977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 46389926 - 46389804
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  || | || |||||| | |||||||| |||||||| ||| | |||||||| |||||| | ||||||||||     
T  46389926 tccgacctctacccctctttgggatgtgggcaatctgtctctccctgcggtggctctgagtcatggcatgcctaccaccaatcatcctcgatggatcaat 46389827  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  46389826 ggggtcctgatcggccatatcta 46389804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 48889639 - 48889594
Alignment:
Q  77 ctttgagtcatcgcacgtctaccacctatcatcttagatggatcaa 122  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||||    
T  48889639 ctttgggtcatcgcacgcctaccaccaatcatcttagatggatcaa 48889594  T

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Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 48889677 - 48889633
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttggg 46  Q
    |||||||||||||||||   | |||||||||||||||||||||||    
T  48889677 gaagtccctgaaccatctctcctccgacctcttcccctctttggg 48889633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 42538130 - 42537818
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | ||||||    
T  42538130 cgaactccctgaaccatccaccctccgacctcttcccctctttgggatgtgcccgctttgtctctccttccggtggctttgagtcatcgcatgcctacca 42538031  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatct-----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    || ||||||||||||||||||||||||||||||||||||||||||     | ||         |||||||||||||||||||||||||||||||||| ||    
T  42538030 ccaatcatcttagatggatcaaccgggttctgatcagacatatctacacaaaaaattaaaagattaacatcatttccataacctaatcaaacacattaaa 42537931  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| |||||| |||||||||| |||||| |||||||||||||||     
T  42537930 cctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaacatcattttcataacttaaaatcattcaatatattcatcattacaataag 42537831  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  42537830 atttatgtccatc 42537818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 2 - 308
Target Start/End: Original strand, 42941579 - 42941891
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||  |  ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||| |||||||    
T  42941579 gaagtccctgaaccatctcctctccaacctcttcccctctttgggatgtgcccgctttgcctctccttccggtggctttgggtcatcacacgcctaccac 42941678  T
Q  102 ctatcatcttagatggatcaaccgggttctgatcagacatatctaga------agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    | |||||||||||||||||||  |||| |||||| | ||||| || |      |         |||||||||||||||||||||||| ||||||||| ||    
T  42941679 caatcatcttagatggatcaatggggtcctgatcggccatatgtatacaaaaaattaaaaaaattaacatcatttccataacctaataaaacacattaaa 42941778  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42941779 cctaaactaaacataaacataatcaaactcattaaaagtacaacgatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaa 42941878  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  42941879 atttatgtccatc 42941891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 13893 - 14199
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||  ||||||||||||| || || ||||||||| |||||||||| || ||||||||||| |||||||| ||    
T  13893 tccctgaaccatctcccctccgacctctaccattctttgggatgtggccgctctgcctctccctccggtggctctgtgtcatcgcacgcctaccaccaat 13992  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctagaagnnnnnnnn----ttaacatcatttccataacctaatcaaacacattcaacctaaa 201  Q
    |||||||||||||||||  |||| |||||| | |||||||| ||             ||||||||||||||||||||||||||||| |||| ||||||||    
T  13993 catcttagatggatcaatggggtcctgatcggccatatctacaaaaaaaaaaaaaaattaacatcatttccataacctaatcaaacgcattaaacctaaa 14092  T
Q  202 ctaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgat 301  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14093 ctaaacataaacaaaatcgaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaatttat 14192  T
Q  302 gtccatc 308  Q
    |||||||    
T  14193 gtccatc 14199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 8 - 308
Target Start/End: Complemental strand, 28877617 - 28877312
Alignment:
Q  8 cctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatca 107  Q
    ||||| ||||||||| |||||||||| ||||| ||||||||||| ||||| ||||||||| | |||||||| ||| |||| ||||| |||||||| ||||    
T  28877617 cctgagccatccaccctccgacctctacccctttttgggatgtggccactctgcctctccctgcggtggctctgaatcatggcacgcctaccaccaatca 28877518  T
Q  108 tcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaac 202  Q
    |||| ||||||||||||||| |||||||||||||||||| |     |         |||||||||||||||||| ||||||||||||||| ||||||||     
T  28877517 tcttcgatggatcaaccgggatctgatcagacatatctacataaaaaattaaaaatttaacatcatttccataatctaatcaaacacattaaacctaaat 28877418  T
Q  203 taaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatg 302  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||    
T  28877417 taaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctgaaatcattcaatataatcatcattacaataaaatttatg 28877318  T
Q  303 tccatc 308  Q
    ||||||    
T  28877317 tccatc 28877312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 24 - 304
Target Start/End: Original strand, 8579620 - 8579905
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||| ||||||||| || || ||||||||| | |||||||| |||||||||||||| |||||||| |||||||||||||||||||     
T  8579620 tccgacctctacccctctctgggatgtggccgctctgcctctcccttcggtggctctgagtcatcgcacgcctaccaccaatcatcttagatggatcaat 8579719  T
Q  124 cgggttctgatcagacatatctagaagnnnnnnnn-----ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaat 218  Q
     |||| |||||| | |||||||| ||              | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8579720 ggggtcctgatcggccatatctacaaaaaaaataaaaaaataaacatcatttccataacctaatcaaacacattaaacctaaactaaacataaacaaaat 8579819  T
Q  219 caaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtc 304  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8579820 caaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaatttatgtc 8579905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 2 - 308
Target Start/End: Original strand, 8701316 - 8701628
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    ||||||||||||||||   || |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||    
T  8701316 gaagtccctgaaccatatcccctccgacctcttcccctcttttggatgtgcccgctttgcctctccttccggtggctttaggtcatcgcacgcctaccac 8701415  T
Q  102 ctatcatcttagatggatcaaccgggttctgatcagacatatctaga------agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    | |||||||||||| ||||||  |||| |||||| | |||||||| |      |         |||||||||||| ||||||||||||||||||||| ||    
T  8701416 caatcatcttagattgatcaatggggtcctgatcggtcatatctacacaaaaaaattaaaaaattaacatcattttcataacctaatcaaacacattaaa 8701515  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  8701516 cctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaatatcatttccataacctaaaatcattcaatataatcattattacaataaa 8701615  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  8701616 atttatgtccatc 8701628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 2 - 308
Target Start/End: Complemental strand, 38969079 - 38968767
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||  || ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||| ||||||| |||||||    
T  38969079 gaagtccctgaaccatctcccctccgacctcttcccctctttgggatgtgcccacttagcctctctttctggtggctttgggtcttcgcacgcctaccac 38968980  T
Q  102 ctatcatcttagatggatcaaccgggttctgatcagacatatctaga------agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    | ||||||||| |||||||||  |||| |||||| | |||||||| |      |         ||||||||||||||||||| |||||||||||||| ||    
T  38968979 caatcatcttaaatggatcaatggggtcctgatcggccatatctaaacaaaaaattaaaaaatttaacatcatttccataacttaatcaaacacattaaa 38968880  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    ||||||||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  38968879 cctaaactaaacataaacataatcaatcacattaaaagtacaacaatgaacatcatttccataacctaaaatcattgaatataatcttcattacaataaa 38968780  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  38968779 atttatgtccatc 38968767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 308
Target Start/End: Complemental strand, 17659298 - 17658991
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||    | || ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| |||||||    
T  17659298 gaagtccctgaaccatc----tcccaacctcttcccctctttgggatgtacccgctttgcctctccttccggtggctttgtgtcatcccacgcctaccac 17659203  T
Q  102 ctatcatcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaac 196  Q
    | ||||||||||||| |||||  | || |||||| | |||||| | |     |         |||||||||||||||||||||| ||||||||||| ||     
T  17659202 caatcatcttagatgaatcaatagtgtcctgatcggccatatcaacacaaaaaattaaaaaattaacatcatttccataacctagtcaaacacattaaaa 17659103  T
Q  197 ctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaa 296  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| |    
T  17659102 ctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaacatcattttcataatctaaaatcattcaatataatcatcattacaataaca 17659003  T
Q  297 ttgatgtccatc 308  Q
    || |||||||||    
T  17659002 tttatgtccatc 17658991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 194 - 308
Target Start/End: Complemental strand, 7758108 - 7757994
Alignment:
Q  194 aacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaata 293  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7758108 aacctaaactaaacataaacataatcaaactcattaaaagtacaacaacgaacatcatttccataacctaaaatcattcaatataatcatcattacaata 7758009  T
Q  294 aaattgatgtccatc 308  Q
    ||||| || ||||||    
T  7758008 aaatttatatccatc 7757994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 40624019 - 40624163
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||||||| |||||||||||||| || ||||| | |||||||||||| |||||||    
T  40624019 gaagtccctgaaccatcccccctccgacctctacccctctttgggatgtgccccctttgcctctcctttcgatggctctaagtcatcgcacgcctaccac 40624118  T
Q  102 ctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    | ||||||||| ||||||||| ||||| ||| |||||||||||||    
T  40624119 caatcatcttaaatggatcaatcgggtcctgctcagacatatcta 40624163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 5197916 - 5197776
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||||| || |||||||||||| |||| ||||| |||||||||||||| |||||||| ||    
T  5197916 tccctgaaccatccaccctccgacctctacccctatttgggatgtggccgctttgcctctccctccgatggctctgagtcatcgcacgcctaccaccaat 5197817  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    |||||||||||||||||  |||| |||||| | ||||||||    
T  5197816 catcttagatggatcaatggggtcctgatcggccatatcta 5197776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 19228041 - 19228145
Alignment:
Q  4 agtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacct 103  Q
    |||||||||||||||  || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||     
T  19228041 agtccctgaaccatctcccctccgacctcttcccctctttgggatgtgcccgctttgcctctccttccggtggctttgggtcatcgcacgcctaccacca 19228140  T
Q  104 atcat 108  Q
    |||||    
T  19228141 atcat 19228145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 27672766 - 27672888
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| || || ||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||||||||     
T  27672766 tccgacctctacccctctttgggatgtggccgctctgcctctccctccggtggctctgagtcatcgcacgcctaccaccaatcatcttagatggatcaat 27672865  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  27672866 ggggtcctgatcggccatatcta 27672888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 7758282 - 7758166
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||||||||  || || ||||||||| |||||||||| |||||||||||||| |||||||| ||    
T  7758282 tccctgaaccatctcccctccgacctctacccctctttgggatgtcgccgctctgcctctccctccggtggctctgagtcatcgcacgcctaccaccaat 7758183  T
Q  106 catcttagatggatcaa 122  Q
    |||||||||| ||||||    
T  7758182 catcttagatcgatcaa 7758166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 28240937 - 28241059
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| ||||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||     
T  28240937 tccgacctctacccctctttgggatgtggccactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaat 28241036  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  28241037 ggggtcctgatcggccatatcta 28241059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 19040216 - 19040336
Alignment:
Q  26 cgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccg 125  Q
    |||||||| ||||||||||||||||| || |  ||||||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||  |    
T  19040216 cgacctctacccctctttgggatgtggccgccctgcctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaatgg 19040315  T
Q  126 ggttctgatcagacatatcta 146  Q
    ||| |||||| | ||||||||    
T  19040316 ggtcctgatcggccatatcta 19040336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 30706061 - 30705939
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||| ||| |  || ||||||| | | |||||||| |||||||||||||| |||||||| |||||||| ||||||||||     
T  30706061 tccgacctctacccctctttgggaagtggctgctctgcctcttcctgcggtggctctgagtcatcgcacgcctaccaccaatcatcttcgatggatcaat 30705962  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  30705961 ggggtcctgatcggccatatcta 30705939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 28241080 - 28241135
Alignment:
Q  159 ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaaca 214  Q
    |||| |||||||| ||||||||||||||||| || |||||||||||||||||||||    
T  28241080 ttaatatcatttcaataacctaatcaaacactttaaacctaaactaaacataaaca 28241135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 28241227 - 28241259
Alignment:
Q  184 aaacacattcaacctaaactaaacataaacaaa 216  Q
    ||||||||| |||||||||||||||||||||||    
T  28241227 aaacacattaaacctaaactaaacataaacaaa 28241259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 51684183 - 51683871
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  51684183 cgaactccctgaaccatccaccctctgacctcttcccctctttgggatgcgcccactttgcctctcctttcggtagctttgagtcatcgcacgcctacca 51684084  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |     |         |||||||||||||||||||||||||||| ||||| ||    
T  51684083 ccaatcatcttagatggatcaaccgggttctgatcagacatatctacataaaaaattaaaaatttaacatcatttccataacctaatcaaatacattaaa 51683984  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    ||||||||||||||||||| ||||||||  | ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  51683983 cctaaactaaacataaacataatcaaacacactaaaagtacaacaatgaacatcatttccataacttaaaatcattcaatataatcatcattacaataaa 51683884  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  51683883 atttatgtccatc 51683871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 55406879 - 55407187
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||||||||||||| |||||||||||||  ||||||    
T  55406879 cgaagtccctgaaccatccaccctccgacctcttcccatctttgggatgtgcccgatttgcctctccttccggtggctctgagtcatcgcacacctacca 55406978  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
     | |||||||||||||||||||  |||||||||||||||||||||| |     |         |||||||||||||||||||||||||||||||||| ||    
T  55406979 gcaatcatcttagatggatcaaatgggttctgatcagacatatctacaccaaaaatttaaaaattaacatcatttccataacctaatcaaacacattaaa 55407078  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  55407079 cctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaa 55407178  T
Q  296 attgatgtc 304  Q
    ||| |||||    
T  55407179 atttatgtc 55407187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 8 - 308
Target Start/End: Original strand, 21021987 - 21022292
Alignment:
Q  8 cctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatca 107  Q
    |||||||||||  || |||||||||| ||||||||||||||||| || || ||||||||| |||||||||| |||||||||||||| |||||||| ||||    
T  21021987 cctgaaccatctcccctccgacctctacccctctttgggatgtggccgctctgcctctccctccggtggctctgagtcatcgcacgcctaccaccaatca 21022086  T
Q  108 tcttagatggatcaaccgggttctgatcagacatatctagaagnnnnnnnnt-----taacatcatttccataacctaatcaaacacattcaacctaaac 202  Q
    |||||||||||||||  |||| |||||| | |||||||| ||         |     |||||||||||| |||||||||||||||||||| |||||||||    
T  21022087 tcttagatggatcaatggggtcctgatcggccatatctacaaaaaaaataataaaattaacatcatttcaataacctaatcaaacacattaaacctaaac 21022186  T
Q  203 taaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatg 302  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21022187 taaacataaacaaaattaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaatttatg 21022286  T
Q  303 tccatc 308  Q
    ||||||    
T  21022287 tccatc 21022292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 37021174 - 37021481
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || || ||||||| ||||||||||||||||| || || ||||||||| |||| ||||| |||||||||||||| |||||||| ||    
T  37021174 tccctgaaccatctcccctctgacctctacccctctttgggatgtggccgctctgcctctccctccgatggctctgagtcatcgcacgcctaccaccaat 37021273  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||||||||||||||||  |||| |||||| | |||||||| |     |         | |||||||||||||||||||||||||||||||| |||||||    
T  37021274 catcttagatggatcaatggggtcctgatcggccatatctacacaaaaaataataaaataaacatcatttccataacctaatcaaacacattaaacctaa 37021373  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |    
T  37021374 actaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattataataaaattta 37021473  T
Q  301 tgtccatc 308  Q
    ||||||||    
T  37021474 tgtccatc 37021481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 6 - 308
Target Start/End: Complemental strand, 50275692 - 50275385
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||||||||| || || ||||||||| |||  |||||||| ||||||||||| | |||||| ||    
T  50275692 tccctgaaccatctcccctccgacctctacccctctttgggatgtggccgctctgcctctccctccaatggctttgggtcatcgcacgccaaccaccaat 50275593  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    ||| |||||||||||||  |||| |||||| | |||||||| |     |         ||||||||||||||||||||||||||||||| || |||||||    
T  50275592 cattttagatggatcaatggggtcctgatcggccatatctacacaaaaaataataaaattaacatcatttccataacctaatcaaacacgttaaacctaa 50275493  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  50275492 actaaacatgaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcaacattacaataaaattta 50275393  T
Q  301 tgtccatc 308  Q
    ||||||||    
T  50275392 tgtccatc 50275385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 24 - 308
Target Start/End: Original strand, 40357395 - 40357684
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| || || ||||||||| | | |||||  |||| ||||||||| |||||||| |||||||||||||||||||     
T  40357395 tccgacctctacccctctttgggatgtggccgctctgcctctccctgcagtggccctgagccatcgcacgcctaccaccaatcatcttagatggatcaat 40357494  T
Q  124 cgggttctgatcagacatatctagaagnnnnnnnnt-----taacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaat 218  Q
     |||| |||||| | |||||||| ||         |     |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  40357495 ggggtcctgatcggccatatctacaaaaaaaataataaaattaacatcatttcaataacctaatcaaacacattaaacctaaactaaacataaacaaaat 40357594  T
Q  219 caaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
     ||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40357595 taaactcattaaaagtacaacaacgaacatcatttcgataacctaaaatcatttaatataatcatcattacaataaaatttatgtccatc 40357684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 308
Target Start/End: Complemental strand, 50902448 - 50902148
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |  |||||||||||| || ||||||| ||||||||||||||  ||||||    
T  50902448 gaagtccctgaaccatccaccctccgacctcttcccctctttgggatgtggctgctttgcctctccctctggtggctctgagtcatcgcacgcttaccac 50902349  T
Q  102 ctatcatcttagatggatcaaccgggttctgatcagacatatct-----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaac 196  Q
    | |||||||||||||||||||  |||| |||||| | |||||||     | ||         ||||||||||||| |||||||||||||||||||         
T  50902348 caatcatcttagatggatcaatggggtcctgatcggtcatatctacaaaaaaaataataagattaacatcatttctataacctaatcaaacacat----- 50902254  T
Q  197 ctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaa 296  Q
          ||||| |||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  50902253 ------taaacctaaacataatcaaactcattaaaagtacaacaatgaacattatttccataacctaaaatcattcaatataatcatcattacaataaaa 50902160  T
Q  297 ttgatgtccatc 308  Q
    || |||||||||    
T  50902159 tttatgtccatc 50902148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 159 - 308
Target Start/End: Original strand, 48255826 - 48255975
Alignment:
Q  159 ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccata 258  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||   ||||||||||||||| ||||||||||||||||    
T  48255826 ttaacatcatttccataacctaatcaaacacattaaacctaaactaaacataaacataatcaaacacgttaaaagtacaacaacgaacatcatttccata 48255925  T
Q  259 acctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  48255926 acctaaaatcattcaatataatcatcattacaataaaatttatgtccatc 48255975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 30704982 - 30704837
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    ||||||||||||||||||| || ||| || |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| |||||| ||||||    
T  30704982 cgaagtccctgaaccatcccccctcccacgtcttcccctctttgggatgtgcccgctttgcctctcctttcggtggttttgagtcaacgcacgcctacca 30704883  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    || |||||||||||||||||||  ||||||||||||||||||||||    
T  30704882 ccaatcatcttagatggatcaattgggttctgatcagacatatcta 30704837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 248
Target Start/End: Original strand, 1088838 - 1089069
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| |  || ||||||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||     
T  1088838 tccgacctctacccctctttgggatgtggctgctctgcctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaat 1088937  T
Q  124 cgggttctgatcagacatatctagaagnnnnnnnn-------ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaa 216  Q
     |||| |||||| | |||||||| ||                ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  1088938 ggggtcctgatcggccatatctacaaaaaaaaaaaaaaaaaattaacatcatttcaataacctaatcaaacacattaaacctaaactaaacataaacaaa 1089037  T
Q  217 atcaaactgattaaaagtacaacaatgaacat 248  Q
    || ||||| |||||||||||||||||||||||    
T  1089038 attaaactcattaaaagtacaacaatgaacat 1089069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 11083104 - 11083224
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||| || || ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||  |||||||    
T  11083104 gaagtccctgaaccatcccccctctgacctctgcccctctttgggatgtgcccgctttgcctctccttccggtggctttgtgtcatcgcactcctaccac 11083203  T
Q  102 ctatcatcttagatggatcaa 122  Q
    | |||||||||||||||||||    
T  11083204 caatcatcttagatggatcaa 11083224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 41932748 - 41932868
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    ||||| |||||| ||||| || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||| |||||||    
T  41932748 gaagtacctgaaacatcccccctccgacctcttcccctctttgggatgtgcccgccttgcctctccttccggtggctttgtgtcatcgcacgcctaccac 41932847  T
Q  102 ctatcatcttagatggatcaa 122  Q
    | |||||||||||||||||||    
T  41932848 caatcatcttagatggatcaa 41932868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 50194437 - 50194316
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||| ||  ||||||    
T  50194437 cgaactccctgaaccatccaccctccgacctcttcccctctttgggatgtggccgctttgcctctccctccggtggctctgagtcatcgtacacctacca 50194338  T
Q  101 cctatcatcttagatggatcaa 122  Q
    || |||||||||||||||||||    
T  50194337 ccaatcatcttagatggatcaa 50194316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 46437179 - 46437059
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||| ||||| || |||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||    
T  46437179 gaagtccctgaatcatcccccctccgacctctacccctctttgggatgtgcccgctttgcctctccttccggtagctctgagtcatcgcacgcctaccac 46437080  T
Q  102 ctatcatcttagatggatcaa 122  Q
    | |||||||||||| ||||||    
T  46437079 caatcatcttagatagatcaa 46437059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 10752532 - 10752651
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    ||||||| |||||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||| | |||||||| ||||||||||  |||||||    
T  10752532 gaagtccttgaaccatcccccctccgacatcttcccctctttgggatgtgcccgctttgcctctccttctgatggctttgtgtcatcgcacacctaccac 10752631  T
Q  102 ctatcatcttagatggatca 121  Q
    | ||||||||||||||||||    
T  10752632 cgatcatcttagatggatca 10752651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 10966301 - 10966420
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    ||||||| |||||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||| | |||||||| ||||||||||  |||||||    
T  10966301 gaagtccttgaaccatcccccctccgacatcttcccctctttgggatgtgcccgctttgcctctccttctgatggctttgtgtcatcgcacacctaccac 10966400  T
Q  102 ctatcatcttagatggatca 121  Q
    | ||||||||||||||||||    
T  10966401 cgatcatcttagatggatca 10966420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 68306 - 68189
Alignment:
Q  188 acattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcatt 287  Q
    ||||| ||| ||||||||||||||||| ||||||||  |||||||||||||   |||||||||||||||||||||||||||||| ||||||||||| |||    
T  68306 acattaaacttaaactaaacataaacataatcaaacacattaaaagtacaa---tgaacatcatttccataacctaaaatcattcaatataatcattatt 68210  T
Q  288 acaataaaattgatgtccatc 308  Q
    |||||||||||  ||||||||    
T  68209 acaataaaatttgtgtccatc 68189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 44679154 - 44679270
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||| ||||||||||||| ||||| ||||||||| |||||||||| |||||||||||| | |||| ||| ||    
T  44679154 tccctgaaccatctcccctccgacctctacccttctttgggatgtggccactctgcctctccctccggtggctctgagtcatcgcatgcctactaccaat 44679253  T
Q  106 catcttagatggatcaa 122  Q
    |||||||||||||||||    
T  44679254 catcttagatggatcaa 44679270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 24 - 214
Target Start/End: Original strand, 30725906 - 30726102
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| || || ||||||||| | |||||||| |||||||| || || |||||||| || ||||| ||||||||||     
T  30725906 tccgacctctacccctctttgggatgtggccgctctgcctctccctgcggtggctctgagtcatggcgcgcctaccaccaattatcttcgatggatcaat 30726005  T
Q  124 cgggttctgatcagacatatct------agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaaca 214  Q
     |||| |||||| | |||||||      | ||         ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  30726006 ggggtcctgatcggccatatctacaaaaaaaaaaaaaaaaattaacatcatttcaataacctaatcaaacacattaaacctaaactaaacataaaca 30726102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 3184970 - 3184854
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || || ||||||| ||||||||||||||||| || || || |||||| |||||||||| ||||||||||||||  ||||||| ||    
T  3184970 tccctgaaccatctcccctctgacctctacccctctttgggatgtggccgctctgtctctccctccggtggctctgagtcatcgcacgcataccaccaat 3184871  T
Q  106 catcttagatggatcaa 122  Q
    |||||||||||||||||    
T  3184870 catcttagatggatcaa 3184854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 75 - 214
Target Start/End: Complemental strand, 14316268 - 14316132
Alignment:
Q  75 ggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccgggttctgatcagacatatctagaagnnnnnnnnttaacatcatttccat 174  Q
    ||||||| ||||| ||||| |||||||| ||||||| |||| |||||| | ||| ||||||||||||||||| |          ||||||||||||||||    
T  14316268 ggctttgtgtcatagcacgcctaccaccaatcatctcagatagatcaatccggtcctgatcagacatatctaca---caaaaaattaacatcatttccat 14316172  T
Q  175 aacctaatcaaacacattcaacctaaactaaacataaaca 214  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  14316171 aacctaatcaaacacattaaacctagactaaacataaaca 14316132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 207
Target Start/End: Original strand, 1308268 - 1308456
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||| ||| ||||||||||||||||| || || || |||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||     
T  1308268 tccgacttctacccctctttgggatgtggccgctctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaat 1308367  T
Q  124 cgggttctgatcagacatatct-----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaactaaac 207  Q
     |||| ||||||   |||||||     | ||         ||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  1308368 ggggtcctgatcgaccatatctacaaaaaaaataataaaattaacatcatttcaataacctaatcaaacacattaaacctaaactaaac 1308456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 30726162 - 30726226
Alignment:
Q  184 aaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacat 248  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  30726162 aaacacattaaacctaaactaaacataaacaaaattaaactcattaaaagtacaacaatgaacat 30726226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 41798094 - 41798214
Alignment:
Q  26 cgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccg 125  Q
    |||||||| ||||||||||||||||| || |  ||||||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||  |    
T  41798094 cgacctctacccctctttgggatgtggccgccctgcctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaatgg 41798193  T
Q  126 ggttctgatcagacatatcta 146  Q
    ||| |||||| | ||||||||    
T  41798194 ggtcctgatcggccatatcta 41798214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 6180887 - 6181009
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  6180887 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 6180986  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  6180987 ggggtcctgatcggccatatcta 6181009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 31422664 - 31422542
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | ||||| || |||||||| ||||| |||||||| |||||||| ||||||||||     
T  31422664 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtgactctgagtcatggcacgcctaccaccaatcatcttcgatggatcaat 31422565  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  31422564 ggggtcctgatcggccatatcta 31422542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 49091396 - 49091274
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  || | || |||||||| |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  49091396 tccgacctctacccctctttgggatgtgggcaatctgtctctccttgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 49091297  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  49091296 ggggtcctgatcggccatatcta 49091274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 9892387 - 9892497
Alignment:
Q  36 ccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccgggttctgatc 135  Q
    |||||||||||||||| || || ||||||||| | |||||||| ||||||||  |||| |||||||| |||||||| ||||||||||  |||| ||||||    
T  9892387 ccctctttgggatgtggccgctctgcctctccctgcggtggctctgagtcatgacacgcctaccaccaatcatcttcgatggatcaatggggtcctgatc 9892486  T
Q  136 agacatatcta 146  Q
     | ||||||||    
T  9892487 ggccatatcta 9892497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 49166009 - 49165887
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| ||||| || ||||| |||||||| |||||||| || |||||||     
T  49166009 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagttatggcacgcctaccaccaatcatcttcgaaggatcaat 49165910  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  49165909 ggggtcctgatcggccatatcta 49165887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 11049839 - 11049891
Alignment:
Q  162 acatcatttccataacctaatcaaacacattcaacctaaactaaacataaaca 214  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  11049839 acatcatttccataacctaatcaaacacattaaacctaaactgaacataaaca 11049891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 21537868 - 21537928
Alignment:
Q  238 acaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaatt 298  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||    
T  21537868 acaataaacatcatttccataacctaaaatcattcaatataatcatcatttcaatataatt 21537928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 203 - 298
Target Start/End: Original strand, 11049916 - 11050008
Alignment:
Q  203 taaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaatt 298  Q
    |||||||||||| ||||||||  |||||||||||||   |||||||||||||||||||||||||  | |  |||| ||||||||||||||| ||||    
T  11049916 taaacataaacataatcaaacacattaaaagtacaa---tgaacatcatttccataacctaaaactagtccatatcatcatcattacaatataatt 11050008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 11049726 - 11049786
Alignment:
Q  62 ctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaa 122  Q
    |||||||| ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  11049726 ctctcctttcggtggctttgtgtcatagcacgcctaccaccaatcatcttagatggatcaa 11049786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 10752703 - 10752758
Alignment:
Q  159 ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaaca 214  Q
    |||||||||||| ||||||||||||||||||||| |||||| | ||||||||||||    
T  10752703 ttaacatcattttcataacctaatcaaacacattaaacctagattaaacataaaca 10752758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 10966472 - 10966527
Alignment:
Q  159 ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaaca 214  Q
    |||||||||||| ||||||||||||||||||||| |||||| | ||||||||||||    
T  10966472 ttaacatcattttcataacctaatcaaacacattaaacctagattaaacataaaca 10966527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 3185018 - 3185070
Alignment:
Q  70 ccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaa 122  Q
    ||||||||| ||||||||||||||  ||||||| |||||||||||||||||||    
T  3185018 ccggtggctctgagtcatcgcacgcataccaccaatcatcttagatggatcaa 3185070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 21537566 - 21537682
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||| || ||||||||||| |||| || |  || ||  |  ||| |||||||||| |||| ||||| ||||| ||||| |||||||| ||    
T  21537566 tccctgaaccatcccccctccgacctctttccctattcgatatatgtgcgtttttcctctccttctggtgactttgtgtcatagcacgcctaccaccaat 21537665  T
Q  106 catcttagatggatcaa 122  Q
     ||||||||||||||||    
T  21537666 tatcttagatggatcaa 21537682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 50022741 - 50022813
Alignment:
Q  74 tggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    |||||||||||||| ||||| |||||||| ||||||||| |||||||||  |||| |||||| | ||||||||    
T  50022741 tggctttgagtcattgcacgcctaccaccaatcatcttaaatggatcaatggggtcctgatcggtcatatcta 50022813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 10752761 - 10752810
Alignment:
Q  187 cacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtac 236  Q
    |||||| ||||||||||||||||||||| ||||||||  |||| ||||||    
T  10752761 cacattaaacctaaactaaacataaacataatcaaacaaattataagtac 10752810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 10966530 - 10966579
Alignment:
Q  187 cacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtac 236  Q
    |||||| ||||||||||||||||||||| ||||||||  |||| ||||||    
T  10966530 cacattaaacctaaactaaacataaacataatcaaacaaattataagtac 10966579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 1308542 - 1308574
Alignment:
Q  184 aaacacattcaacctaaactaaacataaacaaa 216  Q
    ||||||||| |||||||||||||||||||||||    
T  1308542 aaacacattaaacctaaactaaacataaacaaa 1308574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 6319655 - 6319967
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||    
T  6319655 cgaagtccctgaactatccaccgtacgacctcttcccctctttgggatgtgcccgctttgcctctccttccgatggctttgagtcatcgcacgcctacca 6319754  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatct-----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    || ||||||||||||||||||||||||||||||||||||| ||||     | ||         ||||||||||||||||||||||||||||||  || ||    
T  6319755 ccaatcatcttagatggatcaaccgggttctgatcagacacatctacacaaaaaatttaaaaattaacatcatttccataacctaatcaaacaagttaaa 6319854  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    |||||||||||||| || | ||||||||  |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6319855 cctaaactaaacattaatataatcaaacacattaaaagtacaacaatgaatatcatttccataacctaaaatcattcaatataatcatcattacaataaa 6319954  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  6319955 atttatgtccatc 6319967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 159 - 308
Target Start/End: Complemental strand, 31769524 - 31769375
Alignment:
Q  159 ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccata 258  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||    
T  31769524 ttaacatcatttccataacctaatcaaacacattaaacctaaactaaacataaacataatcaaactcattaaaattacaacaatgaacatcattttcata 31769425  T
Q  259 acctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||||||||| |||||||||||||||| ||||||||| || ||||||    
T  31769424 acctaaaatcattcaatataatcatcattataataaaatttatttccatc 31769375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 24722851 - 24722706
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    ||||||||||||||||||| |  ||  |||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||| ||||||    
T  24722851 cgaagtccctgaaccatcccctctctaacctcttcccctctttggaatgtgcccgctttgcctctccttctggtgggtttgagtcatcgcacgcctacca 24722752  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    || |||||||||||||||||||||||||||||||||||||||||||    
T  24722751 ccaatcatcttagatggatcaaccgggttctgatcagacatatcta 24722706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 188 - 298
Target Start/End: Original strand, 24088066 - 24088176
Alignment:
Q  188 acattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcatt 287  Q
    ||||| ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  24088066 acattaaacctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaacatcattttcataacctaaaatcattcaatataatcatcatt 24088165  T
Q  288 acaataaaatt 298  Q
    || ||||||||    
T  24088166 actataaaatt 24088176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 24087845 - 24088062
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||  || || ||||| |||||| ||||||||||||||   ||||||||||||||||||||||||| ||||||||||| |||||||    
T  24087845 gaagtccctgaaccatctcccctctgaccttttccccgctttgggatgtgcctgttttgcctctccttccggtggctttgggtcatcgcacgcctaccac 24087944  T
Q  102 ctatcatcttagatggatcaaccgggttctgatcagacatatct-----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaac 196  Q
    | |||||||||||| ||||||  |||| |||||| | | |||||     | ||         ||||||||||||||||||||||||||||||| || |||    
T  24087945 caatcatcttagatagatcaatggggtcctgatcggccgtatctacacaaaaaattaaaaaattaacatcatttccataacctaatcaaacactttaaac 24088044  T
Q  197 ctaaactaaacataaaca 214  Q
    ||| ||||||||||||||    
T  24088045 ctagactaaacataaaca 24088062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 27617689 - 27617569
Alignment:
Q  26 cgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccg 125  Q
    |||||||| ||||||||||||||||| || |  ||||||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||  |    
T  27617689 cgacctctacccctctttgggatgtggccgccctgcctctccctacggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaatgg 27617590  T
Q  126 ggttctgatcagacatatcta 146  Q
    ||| |||||| | ||||||||    
T  27617589 ggtcctgatcggccatatcta 27617569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 6202124 - 6202002
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  6202124 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 6202025  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  6202024 ggggtcctgatcggccatatcta 6202002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 11689091 - 11688969
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  11689091 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 11688992  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  11688991 ggggtcctgatcggccatatcta 11688969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 22302156 - 22302034
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  22302156 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 22302057  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  22302056 ggggtcctgatcggccatatcta 22302034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 30828749 - 30828871
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  30828749 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 30828848  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  30828849 ggggtcctgatcggccatatcta 30828871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 183; Significance: 5e-99; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 37341286 - 37340973
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    ||||||||||||||||||| || | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||||    
T  37341286 cgaagtccctgaaccatccccccttcgacctcttcccctctttgggatgtgcccgctttgcctctgcttccggtggctttgagtcatcgcacgcttacca 37341187  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctaga------agnnnnnnnnttaacatcatttccataacctaatcaaacacattca 194  Q
    || |||||||||||||||||||  |||| |||||| | |||||||| |      |         |||||||||||||||||||||||||||||||||| |    
T  37341186 ccaatcatcttagatggatcaatggggtcctgatcggccatatctacacaaaaaaattaaaaaattaacatcatttccataacctaatcaaacacattaa 37341087  T
Q  195 acctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataa 294  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37341086 acctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataa 37340987  T
Q  295 aattgatgtccatc 308  Q
    |||| |||||||||    
T  37340986 aatttatgtccatc 37340973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 26 - 308
Target Start/End: Original strand, 9493921 - 9494200
Alignment:
Q  26 cgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccg 125  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||  |    
T  9493921 cgacctcttcccctctttgggatgtgcccgctttgcctctccttccggtggctttgggtcatcgcacgcctaccaccaatcatcttagatggatcaatgg 9494020  T
Q  126 ggttctgatcagacatatctagaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaatcaaactg 225  Q
    ||| |||||| | |||||||| |          |||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||      
T  9494021 ggtcctgatcggccatatctaca---caaaaaattaacatcatttccataacctaatcaaacacattaaatctaaactaaacataaacataatcaaacac 9494117  T
Q  226 attaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  9494118 attaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaatttatgtccatc 9494200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 24 - 308
Target Start/End: Complemental strand, 17836035 - 17835746
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||| ||||||  | || ||||||| | |||||||||| |||||||||||||| |||||||| |||||||||||||||||||     
T  17836035 tccgacctctacccctctttgcgatgtggtcgctctgcctcttcctccggtggctctgagtcatcgcacgcctaccaccaatcatcttagatggatcaat 17835936  T
Q  124 cgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaat 218  Q
     |||| ||||||   |||||||| |     |         |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  17835935 ggggtcctgatcgaccatatctacacaaaaaataataaaattaacatcatttccataacctaatcaaacacattaaacctaaactaaacataaacataat 17835836  T
Q  219 caaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  17835835 caaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaatttatgtccatc 17835746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 6 - 308
Target Start/End: Complemental strand, 10517871 - 10517564
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||||||||| || || ||||||||| |  ||||||| | |||||||||||| |||||||| ||    
T  10517871 tccctgaaccatctcccctccgacctctacccctctttgggatgtggccgctctgcctctccctatggtggctctcagtcatcgcacgcctaccaccaat 10517772  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||||||||||||||||  |||| |||||| | |||||||| |     |         |||||||||||| ||||||||||||||||||||| |||||||    
T  10517771 catcttagatggatcaatggggtcctgatcggccatatctacacaaaaaataataaaattaacatcattttcataacctaatcaaacacattaaacctaa 10517672  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||| |    
T  10517671 actaaacataaacataatcaaactcattaaaagtacaacaatgaacctcatttccataacctaaaatcattcaatataatcatcatttcaataaaattta 10517572  T
Q  301 tgtccatc 308  Q
    ||||||||    
T  10517571 tgtccatc 10517564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 27452710 - 27453023
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| ||||| |||| ||||| ||||||||||| || |||||||||||| || ||||||| ||||||||  |||| ||| ||    
T  27452710 cgaactccctgaaccatccaccctccgatctctacccctttttgggatgtggccgctttgcctctccctctggtggctctgagtcattacacgcctaaca 27452809  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctaga------agnnnnnnnnttaacatcatttccataacctaatcaaacacattca 194  Q
    || |||||||||||||||||||  |||| |||||| | |||||||| |      |         ||||||||||||||| |||||||||||||||||| |    
T  27452810 ccaatcatcttagatggatcaatggggtcctgatcggccatatctatacaaaaaaataataaaattaacatcatttccaaaacctaatcaaacacattaa 27452909  T
Q  195 acctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataa 294  Q
    || ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  27452910 acttaaactaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataaccaaaaatcattcaatataatcatcattaaaataa 27453009  T
Q  295 aattgatgtccatc 308  Q
    |||| |||| ||||    
T  27453010 aatttatgttcatc 27453023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 6 - 308
Target Start/End: Complemental strand, 34739340 - 34739035
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||| ||||| || || ||||||||| || |||||||||| ||||||||||| |||||||| ||    
T  34739340 tccctgaaccatctcccctccgacctctacccctctttggaatgtggccgctctgcctctccctctggtggctttgggtcatcgcacgcctaccaccaat 34739241  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    ||| |||||||||||||| |||| |||||| | ||||| || |     |         |||||||||||||||||||||||||||||||||| |||||||    
T  34739240 cattttagatggatcaacggggtcctgatcggccatatttacacaaaaaataataaaattaacatcatttccataacctaatcaaacacattaaacctaa 34739141  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||  |||||||||||||| |    
T  34739140 actaaacataaacataatcaaactcattaaaagtacaacgatgaacatcatttccataacct--aatcattcaatataatcaatattacaataaaattta 34739043  T
Q  301 tgtccatc 308  Q
    ||||||||    
T  34739042 tgtccatc 34739035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 159 - 308
Target Start/End: Original strand, 47672350 - 47672499
Alignment:
Q  159 ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccata 258  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  47672350 ttaacatcattttcataacctaatcaaacacattaaacctaaactaaacataaacataatcaaacacattaaaagtacaacaatgaacatcatttccata 47672449  T
Q  259 acctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  47672450 acctaaaatcattaaatataatcatcattacaataaaatttatgttcatc 47672499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 308
Target Start/End: Complemental strand, 36978415 - 36978267
Alignment:
Q  159 ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccata 258  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||  |||||| ||||||||||||||||||||| ||||    
T  36978415 ttaacatcatttgcataacctaatcaaacacattaaacctaaactaaacataaacataatcaaacacattaaa-gtacaacaatgaacatcattttcata 36978317  T
Q  259 acctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||||||||| || ||||||||||||||||||||| | |||||||||    
T  36978316 acctaaaatcattcaacataatcatcattacaataaaaattatgtccatc 36978267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 39461439 - 39461294
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||| ||||||| |||||||| ||||||| |||||||||||||| |||||||||||| |||||||||| ||||||||||| || ||||||    
T  39461439 cgaactccctgaacaatccaccctccgaccttttcccctttttgggatgtgcccgctttgcctctccctccggtggctctgagtcatcgctcgcctacca 39461340  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
     | |||||||||||||||||||||||||||||||||||||||||||    
T  39461339 gcaatcatcttagatggatcaaccgggttctgatcagacatatcta 39461294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16678010 - 16677865
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||| ||||||    
T  16678010 cgaactccctgaaccatccaccctccgacctcttcccctctttgggatgtggccgctttgcctctccctccggtggctctgagtcatcgcacgcctacca 16677911  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    || ||||||||||||| |||||  |||| |||||| | ||||||||    
T  16677910 ccaatcatcttagatgcatcaatggggtcctgatcggccatatcta 16677865  T

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Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 17652246 - 17652101
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||| ||||||    
T  17652246 cgaactccctgaaccatccaccctccgacctcttcccctctttgggatgtggccgctttgcctctccctccggtggctctgagtcatcgcacgcctacca 17652147  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    || ||||||||||||| |||||  |||| |||||| | ||||||||    
T  17652146 ccaatcatcttagatgcatcaatggggtcctgatcggccatatcta 17652101  T

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Target: chr7; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 19798254 - 19798109
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||| ||||||    
T  19798254 cgaactccctgaaccatccaccatccgacctcttcccctctttgggatgtggccgctttgcctctccctccggtggctctgagtcatcgcacgcctacca 19798155  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    || ||||||||||||||||| |  |||| |||||| | ||||||||    
T  19798154 ccaatcatcttagatggatcgatggggtcctgatcggccatatcta 19798109  T

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Target: chr7; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 5540671 - 5540787
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||||||| |||||||| ||    
T  5540671 tccctgaaccatccaccctccgacctctacccctctttgggatgtggccacttttcctctccctccggtggctctgagtcatcgcacgcctaccaccaat 5540770  T
Q  106 catcttagatggatcaa 122  Q
    |||||||||||||||||    
T  5540771 catcttagatggatcaa 5540787  T

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Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 159 - 259
Target Start/End: Complemental strand, 39461269 - 39461169
Alignment:
Q  159 ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccata 258  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||    
T  39461269 ttaacatcatttccataacctaatcaaacacgttaaacctaaactaaacataaacataatcaaacacattaaaagtacgacaatgaacatcatttccata 39461170  T
Q  259 a 259  Q
    |    
T  39461169 a 39461169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 47777232 - 47777087
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||||| |||||||||| || |||||||||||||| || |||||||||||  |||||| |||||||||||| ||| | ||||||    
T  47777232 cgaactccctgaaccatccaccctccgacctctacctctctttgggatgtggccgctttgcctctcgctccggtagctttgagtcattgcatgcctacca 47777133  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    || |||||||||||||||||||  |||| |||||| | ||||||||    
T  47777132 ccaatcatcttagatggatcaatagggtcctgatcggccatatcta 47777087  T

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Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 214
Target Start/End: Original strand, 15073382 - 15073579
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| || || ||||||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||     
T  15073382 tccgacctctacccctctttgggatgtggccgctctgcctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaat 15073481  T
Q  124 cgggttctgatcagacatatct-------agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaaca 214  Q
     |||| |||||| | |||||||       | ||         ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  15073482 ggggtcctgatcggccatatctacaaaaaaaaaaaaaaaaaattaacatcatttcaataacctaatcaaacacattaaacctaaactaaacataaaca 15073579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 47777082 - 47777003
Alignment:
Q  229 aaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  47777082 aaaagtacaacaataaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaatttatgtccatc 47777003  T

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Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 14689250 - 14689369
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||  || ||||| |||||||| | ||||| |||||||| ||||||||||||||| ||||| |||| |||||| |||| |||||||    
T  14689250 gaagtccctgaaccatctcccctccgatctcttcccttttttgg-atgtgcccgctttgcctctccttctggtggttttgggtcatcacacgcctaccac 14689348  T
Q  102 ctatcatcttagatggatcaa 122  Q
    | |||||||||||||||||||    
T  14689349 caatcatcttagatggatcaa 14689369  T

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Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 46739609 - 46739725
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| |||| |||||||||||| || || || |||||| |||||||||| ||| |||||||||| |||||||| ||    
T  46739609 tccctgaaccatctcccctccgacctctaccccgctttgggatgtggccgctctgtctctccctccggtggctctgattcatcgcacgcctaccaccaat 46739708  T
Q  106 catcttagatggatcaa 122  Q
    |||||||||||||||||    
T  46739709 catcttagatggatcaa 46739725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 15073649 - 15073713
Alignment:
Q  184 aaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacat 248  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  15073649 aaacacattcaacctaaactaaacataaacaaaattaaactcattaaaagtacaacaatgaacat 15073713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 42507194 - 42507388
Alignment:
Q  27 gacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccgg 126  Q
    ||||||| ||||||||||||||||| || || ||||||||| | |||||||| |||||||| || || |||||||| |||||||| ||||||||||  ||    
T  42507194 gacctctacccctctttgggatgtggccgctctgcctctccctgcggtggctctgagtcatggcgcgcctaccaccaatcatcttcgatggatcaatggg 42507293  T
Q  127 gttctgatcagacatatct-------agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaaca 214  Q
    || ||||||   |||||||       | ||         ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  42507294 gtcctgatcgaccatatctacaaaaaaaaaaaaaaaaaattaacatcatttcaataacctaatcaaacacattaaacctaaactaaacataaaca 42507388  T

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Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 17462402 - 17462524
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||| ||||| ||||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||     
T  17462402 tccgacctctacccctctttggaatgtggccactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaat 17462501  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  17462502 ggggtcctgatcggccatatcta 17462524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 17590812 - 17590690
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||| ||||| ||||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||     
T  17590812 tccgacctctacccctctttggaatgtggccactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaat 17590713  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  17590712 ggggtcctgatcggccatatcta 17590690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 42507448 - 42507512
Alignment:
Q  184 aaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacat 248  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  42507448 aaacacattaaacctaaactaaacataaacaaaattaaactcattaaaagtacaacaatgaacat 42507512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 9370487 - 9370609
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  9370487 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 9370586  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  9370587 ggggtcctgatcggccatatcta 9370609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 41881466 - 41881344
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  41881466 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 41881367  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  41881366 ggggtcctgatcggccatatcta 41881344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 48404333 - 48404211
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  48404333 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 48404234  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  48404233 ggggtcctgatcggccatatcta 48404211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 14689405 - 14689469
Alignment:
Q  244 aacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||||||||||||||| |||||| | |||||||||||||||||||||| ||| |||||||||    
T  14689405 aacatcatttccataacctcaaatcaatcaatataatcatcattacaataacatttatgtccatc 14689469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 35609523 - 35609645
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||   || | || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  35609523 tccgacctctacccctctttgggatgtaggcaatctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 35609622  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  35609623 ggggtcctgatcggccatatcta 35609645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 36978523 - 36978433
Alignment:
Q  56 ctttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    ||||||||||| |||||||||||||| |||||| |||| ||||   | |||||||| ||| ||||||  |||| |||||| | ||||||||    
T  36978523 ctttgcctctcattccggtggctttgggtcatcacacgcctactgtcaatcatcttggatagatcaatggggtcctgatcggccatatcta 36978433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 556121 - 556161
Alignment:
Q  258 aacctaaaatcatttaatataatcatcattacaataaaatt 298  Q
    |||||||||||||| ||||||||||||||| ||||| ||||    
T  556121 aacctaaaatcattcaatataatcatcatttcaatataatt 556161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 172; Significance: 2e-92; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 6 - 308
Target Start/End: Complemental strand, 45429567 - 45429260
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||||||||| || || ||||||||| |||||||||| |||||||||||||| |||||||| ||    
T  45429567 tccctgaaccatctcccctccgacctctacccctctttgggatgtggccgctctgcctctccctccggtggctctgagtcatcgcacgcctaccaccaat 45429468  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||||||||||||||||  |||| |||||| | |||||||| |     |         |||||||||||||||||||||||||||||||||| |||||||    
T  45429467 catcttagatggatcaatggggtcctgatcggccatatctacacaaaaaataataaaattaacatcatttccataacctaatcaaacacattaaacctaa 45429368  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  45429367 actaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaataaaattta 45429268  T
Q  301 tgtccatc 308  Q
    ||||||||    
T  45429267 tgtccatc 45429260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 6 - 308
Target Start/End: Complemental strand, 39948577 - 39948270
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||| | ||||||||||||||||| || || ||||| ||| ||||||||||||||||||||||||| |||||||| ||    
T  39948577 tccctgaaccatctcccctccgacctttacccctctttgggatgtggccgctctgcctttccctccggtggctttgagtcatcgcacgcctaccaccaat 39948478  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||||||||||||||||  || | |||||| | |||||||| |     |         |||||||||||||||||||||||||||||||||| |||||||    
T  39948477 catcttagatggatcaatgggatcctgatcggccatatctacacaaaaaataaaaaaattaacatcatttccataacctaatcaaacacattaaacctaa 39948378  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  39948377 actaaacataaacataatcaaactcattaaaagtacaacaatgaccatcatttccataacctaaaatcattcaatataatcatcattacaataaaattta 39948278  T
Q  301 tgtccatc 308  Q
    | ||||||    
T  39948277 tatccatc 39948270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 24 - 308
Target Start/End: Complemental strand, 28469599 - 28469310
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| || || ||||||||| |||||||||| || ||||||||||| |||||||| || ||||||||||||||||     
T  28469599 tccgacctctacccctctttgggatgtggccgctctgcctctccctccggtggctctgggtcatcgcacgcctaccaccaattatcttagatggatcaat 28469500  T
Q  124 cgggttctgatcagacatatctagaagnnnnnnnnttaa-----catcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaat 218  Q
     |||| |||||| | |||||||| ||         | ||     |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28469499 ggggtcctgatcggccatatctacaaaaaataaaataaaataaacatcatttccataacctaatcaaacacattaaacctaaactaaacataaacaaaat 28469400  T
Q  219 caaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
     ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28469399 taaactcattaaaactacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaatttatgtccatc 28469310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 45136397 - 45136707
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||||||| | |||||||||| |||||||||||||||||  | ||||| |||||| |||||||||| |||||||||||||| ||||||    
T  45136397 cgaactccctgaaccatccatcctccgacctctacccctctttgggatgtggtcgctttgtctctccctccggtggctctgagtcatcgcacgcctacca 45136496  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaa 195  Q
    || |||||||||||| || |||  |||| |||||| | |||||||| |     |         |||||||||||| ||||||||||||||||||||| ||    
T  45136497 ccaatcatcttagattgaacaatggggtcctgatcggccatatctacacaaaaaataataaaattaacatcattttcataacctaatcaaacacattaaa 45136596  T
Q  196 cctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaa 295  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  45136597 cctaaactaaacataaacataatc-aactcattaaaagtacaacaatgaacatcatttccat-acctaaaatcattcaatataatcatcattacaataaa 45136694  T
Q  296 attgatgtccatc 308  Q
    ||| |||||||||    
T  45136695 atttatgtccatc 45136707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 159 - 304
Target Start/End: Complemental strand, 22687197 - 22687052
Alignment:
Q  159 ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccata 258  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  22687197 ttaacatcatttccataacctaatcaaacacattaaacctaaactaaacataaacaaaattaaactcattaaaagtacaacaatgaacatcatttccata 22687098  T
Q  259 acctaaaatcatttaatataatcatcattacaataaaattgatgtc 304  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||    
T  22687097 acctaaaatcattcaatataatcatcattacaataaaatttatgtc 22687052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 194 - 308
Target Start/End: Original strand, 32955648 - 32955762
Alignment:
Q  194 aacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaata 293  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32955648 aacctaaactaaacataaacataatcaaactcattaaaagtacaacaatgaacatcatttccataacctaaaatcattcaatataatcatcattacaata 32955747  T
Q  294 aaattgatgtccatc 308  Q
    ||||| |||||||||    
T  32955748 aaatttatgtccatc 32955762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 10828099 - 10828239
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  || |||||||||| ||||||||||||||||| || || ||||||||| |||||||||||||| |||||||||| |||||||| ||    
T  10828099 tccctgaaccatctcccctccgacctctacccctctttgggatgtgaccgctctgcctctccctccggtggctttgaatcatcgcacgcctaccaccaat 10828198  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatcta 146  Q
    |||||||||||||||||  |||| |||||| | ||||||||    
T  10828199 catcttagatggatcaatggggtcctgatcggccatatcta 10828239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 25514978 - 25515096
Alignment:
Q  4 agtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacct 103  Q
    |||||||||||||||| || ||| |||||||||||||||||||||||||||   ||||||||| |||||||||||||| ||||||||||| ||||||||     
T  25514978 agtccctgaaccatcccccctccaacctcttcccctctttgggatgtgcccgtcttgcctctcattccggtggctttgtgtcatcgcacgcctaccacca 25515077  T
Q  104 atcatcttagatggatcaa 122  Q
    || ||||||||||||||||    
T  25515078 attatcttagatggatcaa 25515096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 29400696 - 29400823
Alignment:
Q  8 cctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatca 107  Q
    |||||||||||  || |||||||||| ||||||||||||||||| |  |||||||||||| |||||||||| |||||||||||||| |||||||| ||||    
T  29400696 cctgaaccatctcccctccgacctctacccctctttgggatgtggctgctttgcctctccctccggtggctctgagtcatcgcacgcctaccaccaatca 29400795  T
Q  108 tcttagatggatcaaccgggttctgatc 135  Q
    |||||||||||||||  |||| ||||||    
T  29400796 tcttagatggatcaatggggtcctgatc 29400823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 15832093 - 15831971
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| ||||||||||||||||| ||||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||     
T  15832093 tccgacctctacccctctttgggatgtggccactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaat 15831994  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  15831993 ggggtcctgatcggccatatcta 15831971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 17421219 - 17421155
Alignment:
Q  184 aaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacat 248  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  17421219 aaacacattaaacctaaactaaacataaacaaaattaaactcattaaaagtacaacaatgaacat 17421155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 17421485 - 17421365
Alignment:
Q  26 cgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaaccg 125  Q
    |||||||| ||||||||||||||||| || |  ||||||||| | |||||||| |||||||| ||||| |||||||| |||||||| ||||||||||  |    
T  17421485 cgacctctacccctctttgggatgtggccgccctgcctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcttcgatggatcaatgg 17421386  T
Q  126 ggttctgatcagacatatcta 146  Q
    ||| |||||| | ||||||||    
T  17421385 ggtcctgatcggccatatcta 17421365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 3939837 - 3939959
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  3939837 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatccttgatggatcaat 3939936  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  3939937 ggggtcctgatcggccatatcta 3939959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 30496044 - 30496166
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  30496044 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 30496143  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  30496144 ggggtcctgatcggccatatcta 30496166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 43979495 - 43979373
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  43979495 tccgacctctacccctctttgggatgtgggcactctgtctctccctgcggtggctctgagtcatagcacgcctaccaccaatcatcctcgatggatcaat 43979396  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  43979395 ggggtcctgatcggccatatcta 43979373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 36655482 - 36655596
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| |||||||| |||||||| |||||||||| ||||||||||||||||| || |||||||||||| |       || | | |||||||||| ||||||    
T  36655482 cgaactccctgaaacatccaccctccgacctctacccctctttgggatgtggccgctttgcctctccct-------ctctaattcatcgcacgcctacca 36655574  T
Q  101 cctatcatcttagatggatcaa 122  Q
    || |||||||||||||||||||    
T  36655575 ccaatcatcttagatggatcaa 36655596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 5352930 - 5352808
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaac 123  Q
    |||||||||| |||||||||||||||||  || | || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||     
T  5352930 tccgacctctacccctctttgggatgtgggcaatctgtctctccctgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaat 5352831  T
Q  124 cgggttctgatcagacatatcta 146  Q
     |||| |||||| | ||||||||    
T  5352830 ggggtcctgatcggccatatcta 5352808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 43538835 - 43538933
Alignment:
Q  24 tccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctatcatcttagatggatcaa 122  Q
    |||||||||| |||||||||||||||||  |||| || |||||| | |||||||| |||||||| ||||| |||||||| |||||| | ||||||||||    
T  43538835 tccgacctctacccctctttgggatgtgggcactctgtctctccatgcggtggctctgagtcatggcacgcctaccaccaatcatcctcgatggatcaa 43538933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 17421339 - 17421289
Alignment:
Q  164 atcatttccataacctaatcaaacacattcaacctaaactaaacataaaca 214  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  17421339 atcatttcaataacctaatcaaacacattaaacctaaactaaacataaaca 17421289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 25515143 - 25515184
Alignment:
Q  161 aacatcatttccataacctaatcaaacacattcaacctaaac 202  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  25515143 aacatcatttccataacctaatcaaaaacattaaacctaaac 25515184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 6 - 308
Target Start/End: Original strand, 14718 - 15025
Alignment:
Q  6 tccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccacctat 105  Q
    |||||||||||||  |||||||||||||  || |||||||||||||  | || ||||||||| |||||||||| |||||||||||||||||| |||| ||    
T  14718 tccctgaaccatctcccttccgacctctaaccttctttgggatgtgggcgctctgcctctccctccggtggctctgagtcatcgcacgtctatcaccaat 14817  T
Q  106 catcttagatggatcaaccgggttctgatcagacatatctaga-----agnnnnnnnnttaacatcatttccataacctaatcaaacacattcaacctaa 200  Q
    |||||||||||||||||  ||||  |||||   |||||||| |     |         |||||||||||| ||||||||||||||||||||| |||||||    
T  14818 catcttagatggatcaatggggtcttgatcgaccatatctacacaaaaaataataaaattaacatcattttcataacctaatcaaacacattaaacctaa 14917  T
Q  201 actaaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcattacaataaaattga 300  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  14918 actaaacataaacataatcaaactcattaaaagtacaacaatgaacaccatttccataacctaaaatcattcaatataatcatcattacaataaaattta 15017  T
Q  301 tgtccatc 308  Q
    ||||||||    
T  15018 tgtccatc 15025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 293
Target Start/End: Complemental strand, 11242 - 10940
Alignment:
Q  2 gaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctaccac 101  Q
    |||||||||||||||||  || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||  | |||||    
T  11242 gaagtccctgaaccatcacccctccgacctcttcccctctttgggatgtgcccgctttgcctctccttccggtggctttgtgtcatcacacaccgaccac 11143  T
Q  102 ctatcatcttagatggatcaaccgggttc---tgatcagacatatct-----agaagnnnnnnnnttaacatcatttccataacctaatcaaacacattc 193  Q
    | |||||||||||||||||||||||   |   | |||||||||||||     | ||         ||||| |||||| ||||||||||||||| |||||     
T  11142 caatcatcttagatggatcaaccggtggcccttcatcagacatatctacacaaaaatttaaaaacttaacctcattttcataacctaatcaaaaacatta 11043  T
Q  194 aacctaaact------aaacataaacaaaatcaaactgattaaaagtacaacaatgaacatcatttccataacctaaaatcatttaatataatcatcatt 287  Q
    ||||||||||      ||||||||||| ||||||||  |||||||||   ||||||||||||||||||||||||||||| |||| | |||||||||||||    
T  11042 aacctaaactaaacagaaacataaacataatcaaacacattaaaagt---acaatgaacatcatttccataacctaaaaccattcagtataatcatcatt 10946  T
Q  288 acaata 293  Q
    ||||||    
T  10945 acaata 10940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 18047 - 18190
Alignment:
Q  1 cgaagtccctgaaccatccaccttccgacctcttcccctctttgggatgtgcccactttgcctctccttccggtggctttgagtcatcgcacgtctacca 100  Q
    |||| ||||||||||| ||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||| ||||| ||||||    
T  18047 cgaactccctgaaccacccaccctccgacctcttcccctctttaggatgtgctcgctttgcctctccttccggtggctttgagtcattgcacgcctacca 18146  T
Q  101 cctatcatcttagatggatcaaccgggttctgatcagacatatc 144  Q
     | ||||||||||||| ||||||||| || |||||| |||||||    
T  18147 acaatcatcttagatgtatcaaccggattatgatcaaacatatc 18190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 164 - 228
Alignment:
Q  184 aaacacattcaacctaaactaaacataaacaaaatcaaactgattaaaagtacaacaatgaacat 248  Q
    ||||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  164 aaacacattaaacataaactaaacataaacaaaattaaactcattaaaagtacaacaatgaacat 228  T

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Target: scaffold0293; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 49 - 104
Alignment:
Q  159 ttaacatcatttccataacctaatcaaacacattcaacctaaactaaacataaaca 214  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  49 ttaacatcatttcaataacctaatcaaacacattaaacctaaactaaacataaaca 104  T

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Target: scaffold0634 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 8059 - 8017
Alignment:
Q  266 atcatttaatataatcatcattacaataaaattgatgtccatc 308  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  8059 atcatttaatataatcatcattacaataaaatttatgtccatc 8017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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