View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8901_high_21 (Length: 408)

Name: NF8901_high_21
Description: NF8901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8901_high_21
NF8901_high_21
[»] chr1 (24 HSPs)
chr1 (145-402)||(4882568-4882824)
chr1 (1-82)||(424353-424434)
chr1 (1-82)||(7995622-7995703)
chr1 (1-82)||(12871599-12871680)
chr1 (1-82)||(33487092-33487173)
chr1 (1-80)||(32784088-32784167)
chr1 (1-66)||(4882421-4882486)
chr1 (1-82)||(27534677-27534758)
chr1 (1-82)||(28678192-28678273)
chr1 (1-82)||(42490871-42490952)
chr1 (1-78)||(3232770-3232847)
chr1 (1-78)||(20411555-20411632)
chr1 (1-78)||(29205267-29205344)
chr1 (1-78)||(13488598-13488675)
chr1 (1-78)||(14265266-14265343)
chr1 (1-82)||(18343592-18343673)
chr1 (19-82)||(33939082-33939145)
chr1 (4-82)||(45750456-45750534)
chr1 (1-65)||(37822407-37822471)
chr1 (1-82)||(45193688-45193769)
chr1 (4-78)||(4871091-4871165)
chr1 (1-50)||(44517157-44517206)
chr1 (4-52)||(10627008-10627056)
chr1 (5-81)||(15791554-15791630)
[»] scaffold0312 (1 HSPs)
scaffold0312 (1-82)||(6115-6196)
[»] chr5 (24 HSPs)
chr5 (1-82)||(17331306-17331387)
chr5 (1-76)||(17699537-17699612)
chr5 (1-82)||(32347776-32347858)
chr5 (1-82)||(6281022-6281103)
chr5 (1-82)||(28040607-28040688)
chr5 (1-80)||(29097769-29097848)
chr5 (1-78)||(27241046-27241123)
chr5 (1-82)||(33164530-33164611)
chr5 (1-82)||(43493850-43493931)
chr5 (1-82)||(17096301-17096385)
chr5 (1-82)||(26295120-26295201)
chr5 (21-82)||(7771888-7771949)
chr5 (1-77)||(178168-178244)
chr5 (1-77)||(42609127-42609203)
chr5 (1-82)||(6635227-6635309)
chr5 (1-82)||(23882178-23882259)
chr5 (1-77)||(12439696-12439771)
chr5 (1-75)||(34431045-34431119)
chr5 (1-81)||(20483165-20483245)
chr5 (1-78)||(39531465-39531540)
chr5 (1-47)||(3079367-3079413)
chr5 (1-82)||(3740336-3740416)
chr5 (1-78)||(6681936-6682013)
chr5 (1-50)||(39179890-39179939)
[»] chr2 (35 HSPs)
chr2 (1-82)||(9690035-9690116)
chr2 (1-82)||(17268186-17268267)
chr2 (1-82)||(43474190-43474271)
chr2 (1-78)||(44942267-44942344)
chr2 (1-82)||(11937920-11938002)
chr2 (1-82)||(12704665-12704746)
chr2 (1-82)||(15919852-15919933)
chr2 (1-82)||(22597113-22597194)
chr2 (1-82)||(25067830-25067911)
chr2 (1-78)||(27095687-27095764)
chr2 (3-82)||(20561196-20561275)
chr2 (1-82)||(5754266-5754347)
chr2 (1-81)||(13740722-13740801)
chr2 (1-82)||(9978731-9978812)
chr2 (1-82)||(18089454-18089535)
chr2 (1-78)||(33012059-33012136)
chr2 (1-82)||(38384504-38384585)
chr2 (6-82)||(32015198-32015274)
chr2 (4-82)||(7073013-7073091)
chr2 (1-82)||(34416823-34416904)
chr2 (5-82)||(36867986-36868063)
chr2 (1-82)||(38535367-38535448)
chr2 (4-81)||(4739310-4739385)
chr2 (1-75)||(35333490-35333564)
chr2 (1-78)||(4604369-4604446)
chr2 (1-82)||(34963128-34963208)
chr2 (38-82)||(12891188-12891232)
chr2 (12-78)||(28261966-28262032)
chr2 (1-82)||(31908878-31908959)
chr2 (4-76)||(11798582-11798653)
chr2 (1-82)||(13879068-13879157)
chr2 (1-82)||(14019193-14019282)
chr2 (1-72)||(4732059-4732130)
chr2 (145-183)||(8799510-8799548)
chr2 (1-72)||(34470952-34471025)
[»] chr8 (25 HSPs)
chr8 (1-80)||(41361712-41361791)
chr8 (1-82)||(1810290-1810370)
chr8 (1-82)||(37612631-37612712)
chr8 (1-82)||(2025279-2025360)
chr8 (1-78)||(10338892-10338969)
chr8 (1-82)||(24791238-24791319)
chr8 (1-82)||(10147924-10148006)
chr8 (4-82)||(11161860-11161938)
chr8 (1-82)||(30026950-30027031)
chr8 (1-82)||(39067759-39067840)
chr8 (1-82)||(14600768-14600849)
chr8 (1-78)||(31202440-31202517)
chr8 (1-82)||(31407818-31407899)
chr8 (1-78)||(2234540-2234617)
chr8 (1-77)||(9501572-9501649)
chr8 (1-82)||(13570796-13570877)
chr8 (1-75)||(1039963-1040037)
chr8 (1-78)||(12329608-12329685)
chr8 (1-82)||(23971164-23971245)
chr8 (26-82)||(7583859-7583915)
chr8 (1-82)||(31308120-31308207)
chr8 (1-76)||(30039402-30039476)
chr8 (12-82)||(13576257-13576326)
chr8 (2-75)||(10334159-10334232)
chr8 (42-78)||(24699812-24699848)
[»] chr7 (32 HSPs)
chr7 (1-82)||(42603831-42603912)
chr7 (1-80)||(5684345-5684424)
chr7 (1-80)||(5709395-5709474)
chr7 (1-78)||(28664974-28665051)
chr7 (1-80)||(9785297-9785376)
chr7 (1-80)||(22747570-22747648)
chr7 (1-82)||(11832996-11833078)
chr7 (1-79)||(17473785-17473863)
chr7 (1-79)||(17579351-17579429)
chr7 (4-82)||(46026094-46026172)
chr7 (1-82)||(36579374-36579455)
chr7 (1-82)||(45457618-45457699)
chr7 (1-82)||(48304457-48304538)
chr7 (1-82)||(21603441-21603521)
chr7 (1-82)||(45482042-45482123)
chr7 (6-78)||(10574363-10574435)
chr7 (1-82)||(21990639-21990721)
chr7 (1-78)||(1281199-1281276)
chr7 (1-82)||(27535434-27535515)
chr7 (1-78)||(39533037-39533114)
chr7 (1-82)||(6667373-6667455)
chr7 (1-82)||(17509266-17509346)
chr7 (1-82)||(17543868-17543948)
chr7 (1-82)||(42644654-42644735)
chr7 (1-82)||(3266360-3266447)
chr7 (4-66)||(2622586-2622648)
chr7 (1-78)||(32740734-32740812)
chr7 (4-78)||(39707272-39707345)
chr7 (1-82)||(41287935-41288017)
chr7 (1-78)||(21954881-21954957)
chr7 (26-78)||(36719628-36719680)
chr7 (38-82)||(40761567-40761611)
[»] chr4 (38 HSPs)
chr4 (1-82)||(43244443-43244524)
chr4 (1-81)||(394336-394416)
chr4 (1-80)||(31521962-31522041)
chr4 (1-82)||(7060302-7060383)
chr4 (1-82)||(22757072-22757153)
chr4 (1-82)||(29268839-29268920)
chr4 (1-82)||(44757104-44757185)
chr4 (1-80)||(51152105-51152184)
chr4 (1-80)||(8712510-8712589)
chr4 (1-75)||(13965545-13965619)
chr4 (1-82)||(478074-478154)
chr4 (1-82)||(6911658-6911739)
chr4 (1-82)||(24568775-24568856)
chr4 (1-82)||(24825627-24825708)
chr4 (1-82)||(30202016-30202097)
chr4 (1-82)||(24611861-24611942)
chr4 (1-78)||(26742525-26742602)
chr4 (4-80)||(27394810-27394886)
chr4 (1-82)||(39837572-39837654)
chr4 (1-82)||(24100117-24100198)
chr4 (1-82)||(25658145-25658226)
chr4 (1-78)||(26674354-26674431)
chr4 (1-82)||(29922812-29922896)
chr4 (1-67)||(38944209-38944275)
chr4 (4-77)||(5814330-5814403)
chr4 (1-82)||(7084184-7084265)
chr4 (1-82)||(11210375-11210456)
chr4 (1-74)||(20399965-20400038)
chr4 (1-78)||(22049467-22049543)
chr4 (1-73)||(7083878-7083950)
chr4 (1-82)||(626610-626690)
chr4 (1-58)||(6881958-6882015)
chr4 (1-78)||(7861267-7861344)
chr4 (1-80)||(19745369-19745448)
chr4 (1-80)||(19794358-19794437)
chr4 (1-46)||(43493349-43493394)
chr4 (1-77)||(12717180-12717255)
chr4 (1-73)||(20887817-20887889)
[»] chr3 (30 HSPs)
chr3 (1-82)||(3456921-3457002)
chr3 (1-82)||(11819061-11819142)
chr3 (1-82)||(36691869-36691950)
chr3 (1-82)||(48652510-48652591)
chr3 (1-82)||(1074963-1075044)
chr3 (1-82)||(31462816-31462897)
chr3 (1-82)||(14585440-14585521)
chr3 (1-82)||(30156352-30156432)
chr3 (1-78)||(31270308-31270385)
chr3 (1-78)||(32080824-32080901)
chr3 (3-82)||(4206583-4206662)
chr3 (1-82)||(13702042-13702123)
chr3 (1-82)||(34960928-34961009)
chr3 (1-82)||(53155500-53155581)
chr3 (1-76)||(53402614-53402689)
chr3 (1-80)||(54239088-54239167)
chr3 (1-82)||(49628157-49628239)
chr3 (1-82)||(55090653-55090734)
chr3 (1-82)||(39610182-39610271)
chr3 (1-80)||(35174684-35174763)
chr3 (4-82)||(27189467-27189545)
chr3 (1-82)||(36624764-36624845)
chr3 (1-82)||(48400877-48400958)
chr3 (1-60)||(22484965-22485024)
chr3 (1-66)||(24483748-24483813)
chr3 (1-82)||(38527241-38527322)
chr3 (1-77)||(40013342-40013421)
chr3 (153-193)||(4512853-4512893)
chr3 (27-77)||(48854889-48854939)
chr3 (39-82)||(49628194-49628238)
[»] scaffold1379 (1 HSPs)
scaffold1379 (1-82)||(1148-1229)
[»] chr6 (14 HSPs)
chr6 (1-82)||(6419920-6420001)
chr6 (1-82)||(12481432-12481513)
chr6 (1-82)||(15590141-15590222)
chr6 (1-82)||(21507870-21507951)
chr6 (1-82)||(14783233-14783314)
chr6 (7-76)||(29927447-29927516)
chr6 (1-78)||(31937481-31937557)
chr6 (1-82)||(8693719-8693803)
chr6 (1-82)||(23654228-23654309)
chr6 (1-81)||(35219966-35220045)
chr6 (1-80)||(4921943-4922023)
chr6 (1-82)||(2304872-2304953)
chr6 (18-82)||(4084996-4085060)
chr6 (1-81)||(19402870-19402950)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-77)||(35065-35141)
[»] scaffold0536 (1 HSPs)
scaffold0536 (1-82)||(2878-2961)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-67)||(7186-7252)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-82)||(74142-74223)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-82)||(404320-404401)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-80)||(2479-2557)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-82)||(13307-13392)


Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 145 - 402
Target Start/End: Original strand, 4882568 - 4882824
Alignment:
Q  145 ttataatgagttatttggtcgcttcactttaaattatgtttgacccattagtnnnnnnnnttaaataaattgcaggttgacgagttggcatgcaggtcgg 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  4882568 ttataatgagttatttggtcgcttcactttaaattatgtttgacccattagtaaaaaaa-ttaaataaattgcaggttgacgagttggcatgcaggtcgg 4882666  T
Q  245 ccctgtctctgccccaccccattttttcaacaagtttaatgggacgagtcaactaaaagcgacaagttcaaaatggaagttcatctggtcaaaaatagca 344  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |     
T  4882667 ccctgtctctgccccaccccattttttcaacaagtttaacgggacgagtcaactaaaagcggcaagttcaaaatggaagttcatctggtcaaaaataacg 4882766  T
Q  345 gactaaacaaactggtctgacagattgaacctgttttactacacctattgatgtccat 402  Q
    | |||||||||| | || |||||||||||||| |||||||||||||||||||||||||    
T  4882767 ggctaaacaaaccgatccgacagattgaacctattttactacacctattgatgtccat 4882824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 424353 - 424434
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  424353 atcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 424434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7995622 - 7995703
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| | |||| |||||||||||||||||| |||||| ||||||||||||||    
T  7995622 atcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttgggtcaaaattgaccctaaatcacccctct 7995703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12871680 - 12871599
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  12871680 atcacttattcgattaggatataatgaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 12871599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33487092 - 33487173
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  33487092 atcacatattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 33487173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32784167 - 32784088
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||||||||| ||||||||| ||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||    
T  32784167 atcacttattcaataaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccct 32784088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4882421 - 4882486
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgac 66  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||    
T  4882421 atcacttattcaattaggatataatgaaaaacaaatcggaggggtgatttttgggtcgaaattgac 4882486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27534758 - 27534677
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| | ||||| ||||||||||| |||||| |||||||||||||||| |||||| ||||||| ||||||    
T  27534758 atcacttattcaattaaggtagaaggaaaaacaaatcggagggatgatttttgggtcaaaattgaccctaaatcatccctct 27534677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28678192 - 28678273
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| ||||||| ||||||||| | ||| | ||||||||||||||||| |||||| ||||||||||||||    
T  28678192 atcacttattcaattatgatagaacgaaaaacaattcggacgagtgatttttgggtcaaaattgaccctaaatcacccctct 28678273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 42490952 - 42490871
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| ||||||| ||||||||| | ||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  42490952 atcacttattcaattaagatagaacgaaaaacaattcggaggggtgatttttaggtcaaacttgaccctaaatcacctctct 42490871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3232847 - 3232770
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||| ||||||||||||||||||| ||||||||| | ||||||||||||||| | ||||| |||||| ||||||||||    
T  3232847 atcatttattcaattaggatagaaggaaaaacaattcggaggggtgattttttgatcaaaattgaccctaaatcaccc 3232770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20411632 - 20411555
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||||||||||| | ||| || ||||||||| | ||| ||||||||||||||||||| |||||||||||||||||    
T  20411632 atcacttattcaatttgaataaaaagaaaaacaattcggatgggtgatttttgggtcaaaattgaccataaatcaccc 20411555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29205344 - 29205267
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||| ||||||| ||||||||| |   ||||||||||||||||||||| |||||| ||||||||||    
T  29205344 atcacttattcaattatgatagaaggaaaaacaattccaaggggtgatttttgggtcaaaattgaccctaaatcaccc 29205267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13488598 - 13488675
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||| | | ||| ||||||||||| ||| ||||||||||||||||||| | |||| ||||||||||    
T  13488598 atcacttattcaattaaggtggaaggaaaaacaaatcggatgggtgatttttgggtcaaaatcgaccctaaatcaccc 13488675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14265343 - 14265266
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||| ||||||||||||| ||||||||  | |||||||||||||||  |||||| |||||| ||||||||||    
T  14265343 atcacttatttaattaggatagaaggaaaaacagctcggaggggtgatttttttgtcaaaattgaccctaaatcaccc 14265266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18343673 - 18343592
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||| ||| ||||| | ||||| ||||||||||| | ||||||||||||||||||||| |||| | ||||||||||||||    
T  18343673 atcactcatttaattaaggtagaaggaaaaacaaatcgaaggggtgatttttgggtcaaaattgatcctaaatcacccctct 18343592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 33939082 - 33939145
Alignment:
Q  19 atagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||| ||||||||| |  |||||||||||||||||||||| |||||| ||||||||||||||    
T  33939082 atagaaagaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctct 33939145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 45750534 - 45750456
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||| || ||||||  ||| |||  | |||||||||||||||| |||||| ||||||||||||||    
T  45750534 acttattcaattaggataaaaggaaaaaacaatcggattgatgatttttgggtcaaaattgaccttaaatcacccctct 45750456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37822407 - 37822471
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttga 65  Q
    |||||||||||||||||||||||| ||||||||| |  || |||| |||||||||||||| ||||    
T  37822407 atcacttattcaattaggatagaaggaaaaacaattcagaagggtaatttttgggtcaaaattga 37822471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45193688 - 45193769
Alignment:
Q  1 atcacttattcaattaggatagaatg-aaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| | |||||||| | |||||||| ||| |||||| ||| |||||| |||||| |||||||    
T  45193688 atcacttattcaattaggatagaaggaaaaaacaactcggaggggt-attattgggttaaaattgaccctaaatcgcccctct 45193769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 4871091 - 4871165
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||| ||| || ||||||||| | |||| |||||||| || |||||| |||| | ||||||||||    
T  4871091 acttattcaattagaataaaaggaaaaacaattcggagtggtgatttatgagtcaaaattgatcttaaatcaccc 4871165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44517206 - 44517157
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgattt 50  Q
    |||||||||| ||||||||||||| ||||||||| | ||| |||||||||    
T  44517206 atcacttattgaattaggatagaaggaaaaacaattcggaagggtgattt 44517157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 10627056 - 10627008
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgattttt 52  Q
    |||||||||||||||||| || ||||||||| | |||||| ||||||||    
T  10627056 acttattcaattaggatataaagaaaaacaactcggagggatgattttt 10627008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 15791554 - 15791630
Alignment:
Q  5 cttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctc 81  Q
    |||||||||||| |||| || ||||||||| | ||| | |||||||||| |||||| |||| | ||||||| |||||    
T  15791554 cttattcaattaagatataaggaaaaacaactcggatgagtgatttttgtgtcaaaattgatcctaaatcagccctc 15791630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6196 - 6115
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  6196 atcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 6115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17331387 - 17331306
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||    
T  17331387 atcacttattcaattaagatagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 17331306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17699612 - 17699537
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcac 76  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||| ||||||||    
T  17699612 atcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcac 17699537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32347776 - 32347858
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaa-caaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| |||||| ||| | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  32347776 atcacttattcaattaggatagaaggaaaaaacaagtcggaggggtgatttttgggtcaaagttgaccctaaatcacccctct 32347858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6281103 - 6281022
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||| |||||| |||||| || |  |||||||||||||||||||||| |||||||||||||||||||||    
T  6281103 atcacttattcaattagaatagaaggaaaaataattcagaggggtgatttttgggtcaaaattgaccataaatcacccctct 6281022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28040688 - 28040607
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| || ||||||| | | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  28040688 atcacttattcaattaggatataaggaaaaacgatttggaggggtgatttttgggtcaaaattgaccgtaaatcacccctct 28040607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29097848 - 29097769
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||||||||||| | ||||| ||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||||    
T  29097848 atcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatctttgggtcaaaattgaccctaaatcacccct 29097769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27241123 - 27241046
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||||||||||||||||| || ||||||||| |  |||||||||||||||||||||| |||| ||||||||||||    
T  27241123 atcacttattcaattaggataaaaggaaaaacaattcagaggggtgatttttgggtcaaaattgatcataaatcaccc 27241046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33164530 - 33164611
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| | ||||| ||||||||| | ||||| |||||||||| |||||| |||||||||||||||||||||    
T  33164530 atcacttattcaattaaggtagaaggaaaaacaattcggaggagtgatttttgagtcaaaattgaccataaatcacccctct 33164611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 43493931 - 43493850
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||| |||||| ||||||||| | |||| |||||||||||| ||||| |||||| ||||||||||||||    
T  43493931 atcacttattcaattagaatagaaggaaaaacaattcggagaggtgatttttggatcaaaattgaccctaaatcacccctct 43493850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17096301 - 17096385
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaa---caaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||   ||| | |||||||||||| |||||||||| |||||| ||||||||||||||    
T  17096301 atcacttattcaattaggatagaaggaaaaaaaacaactgggaggggtgattattgggtcaaaattgaccctaaatcacccctct 17096385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26295120 - 26295201
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||| ||||||||| ||||||||  | ||||||||||||||||| ||||| |||||| ||||||||| ||||    
T  26295120 atcacttattcaataaggatagaaggaaaaacacttcggaggggtgatttttggatcaaaattgaccctaaatcacctctct 26295201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 7771888 - 7771949
Alignment:
Q  21 agaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||| ||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  7771888 agaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 7771949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 178168 - 178244
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacc 77  Q
    ||||||||||||||||||||| || |||| |||| | |||| ||||||||||| |||||| |||||| |||||||||    
T  178168 atcacttattcaattaggatataaggaaacacaactcggagaggtgatttttgagtcaaaattgaccttaaatcacc 178244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42609203 - 42609127
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacc 77  Q
    ||||||||||||||||||||||||  |||||||| | ||| | ||||||||| ||||||| |||||| |||||||||    
T  42609203 atcacttattcaattaggatagaagaaaaaacaattcggatgagtgatttttaggtcaaaattgaccctaaatcacc 42609127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6635309 - 6635227
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggag-gggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| ||||||| ||||||||| |  ||| ||||||||||||||||||| ||| || ||||||| ||||||    
T  6635309 atcacttattcaattatgatagaaggaaaaacaactcagagagggtgatttttgggtcaaaattggccctaaatcatccctct 6635227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23882178 - 23882259
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||| |||||||| ||||||||| | |||  | |||||||||  ||||| |||||| ||||||||||||||    
T  23882178 atcacttattcaatttggatagaaagaaaaacaatttggattgatgatttttgaatcaaaattgaccctaaatcacccctct 23882259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12439696 - 12439771
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacc 77  Q
    ||||||||||||| |||||||||||||||||||| | ||| ||||||||||| ||||||| ||  || |||||||||    
T  12439696 atcacttattcaactaggatagaatgaaaaacaattcgga-gggtgatttttaggtcaaaattatccctaaatcacc 12439771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 34431119 - 34431045
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatca 75  Q
    ||||||||||||||||  ||||||  |||||||| | | | ||||||||||||||||||| |||||| |||||||    
T  34431119 atcacttattcaattaaaatagaagaaaaaacaattcgaatgggtgatttttgggtcaaaattgaccctaaatca 34431045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20483245 - 20483165
Alignment:
Q  1 atcacttattcaa-ttaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctc 81  Q
    ||||||||||||| |||| ||| || ||||||||| | |||||| |||||||||||||||| |||| | |||||||||||||    
T  20483245 atcacttattcaaattagaataaaaggaaaaacaatttggaggg-tgatttttgggtcaaaattgatcctaaatcacccctc 20483165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39531465 - 39531540
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||| ||||||| | ||||||| | |||||| ||| |||||||||||| |||||| ||||||||||    
T  39531465 atcacttattcaattacgatagaa-ggaaaacaactcggagggatga-ttttgggtcaaaattgaccttaaatcaccc 39531540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3079367 - 3079413
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtga 47  Q
    |||||||||||||||| |||| || ||||||||||| ||||||||||    
T  3079367 atcacttattcaattatgatataaggaaaaacaaatcggaggggtga 3079413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3740416 - 3740336
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| | ||||||| |  || || ||||||||| |||||| || ||| |||||||| |||||    
T  3740416 atcacttattcaattaggatagaa-ggaaaacaattcagatggatgatttttgagtcaaaattaaccctaaatcacacctct 3740336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6681936 - 6682013
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||  |||| || ||||||||| | | | | |||||||||||| ||||||||||  ||||||||||    
T  6681936 atcacttattcaattcagataaaaggaaaaacaactcgaatgagtgatttttgggccaaatttgactctaaatcaccc 6682013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39179890 - 39179939
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgattt 50  Q
    ||||||||||||||||| |||||| |||||| || | |||||||||||||    
T  39179890 atcacttattcaattagaatagaaggaaaaataattcggaggggtgattt 39179939  T

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Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9690035 - 9690116
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||  | |||||||||||||||||||||||||||||| ||||||||||||||    
T  9690035 atcacttattcaattaggatagaaggaaaaacagttcggaggggtgatttttgggtcaaatttgaccttaaatcacccctct 9690116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17268186 - 17268267
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| | | |||| |||||||||||||||| |||||||||||||||||||||    
T  17268186 atcacttattcaattaggatagaaggaaaaacaactcgaagggatgatttttgggtcaaaattgaccataaatcacccctct 17268267  T

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Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 43474190 - 43474271
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||| |||||| ||||||||||||||    
T  43474190 atcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccctaaatcacccctct 43474271  T

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Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44942344 - 44942267
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  44942344 atcacttattcaattaggatagaagaaaaaacaactcggaggggtgatttttgggtcaaaattgaccataaatcaccc 44942267  T

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Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11937920 - 11938002
Alignment:
Q  1 atcacttattcaattaggatagaatg-aaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  11937920 atcacttattcaattaggatagaaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 11938002  T

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Target: chr2; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12704746 - 12704665
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| || ||||||||| | | ||||||||||||||||||||| |||||| ||||||||||||||    
T  12704746 atcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccctct 12704665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 15919933 - 15919852
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||| ||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||  ||||||||||||||    
T  15919933 atcatttattcaattaggatagaaggaaaaacaactcggaggggtgatttttgggtcaaaattgactctaaatcacccctct 15919852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22597194 - 22597113
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||| ||||||||||||| ||||||||| | |||||| |||||||||||||||| |||||| ||||||||||||||    
T  22597194 atcacttatttaattaggatagaaggaaaaacaactcggagggatgatttttgggtcaaaattgaccttaaatcacccctct 22597113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 25067911 - 25067830
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||  |||||| ||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||    
T  25067911 atcacttattcaattaaaatagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacctctct 25067830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27095764 - 27095687
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||| |||||| ||||||||||    
T  27095764 atcacttattcaattaggatagaaggaaaaacaactcggaggggtgatttttaggtcaaaattgaccctaaatcaccc 27095687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 20561196 - 20561275
Alignment:
Q  3 cacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||| ||| |||||||| ||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  20561196 cacttattcgatttggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 20561275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5754347 - 5754266
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||| |||||||| |||||||||| ||||||||| | |||||| |||||||||||||||| |||||| ||||||||||||||    
T  5754347 atcatttattcaactaggatagaaggaaaaacaattcggagggatgatttttgggtcaaaattgaccctaaatcacccctct 5754266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13740722 - 13740801
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctc 81  Q
    |||||||||||||||||||||||| ||||||||| | |||| ||||||||||||||||||  ||||||||||||| |||||    
T  13740722 atcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttttgggtcaaa-atgaccataaatcatccctc 13740801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9978731 - 9978812
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||| ||||||||||| |||| || ||||||||| | | ||||||||||||||||||||| |||||| ||||||||||||||    
T  9978731 atcatttattcaattaagataaaaggaaaaacaatttgaaggggtgatttttgggtcaaaattgaccttaaatcacccctct 9978812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18089454 - 18089535
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| ||  |||||||| | ||||| ||||||||||| ||||| |||||| ||||||||||||||    
T  18089454 atcacttattcaattaggatataagaaaaaacaattcggaggagtgatttttggatcaaaattgaccctaaatcacccctct 18089535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33012136 - 33012059
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||||||||||||| |||||| ||||||||| | ||| | ||||||||||||||||| |||||| ||||||||||    
T  33012136 atcacttattcaattagaatagaaggaaaaacaattcggatgagtgatttttgggtcaaaattgaccctaaatcaccc 33012059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 38384504 - 38384585
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||| || || ||||||||||| ||||  ||||||||||||||||| ||||||  |||||||||||||    
T  38384504 atcacttattcaattagggtataaggaaaaacaaatcggagatgtgatttttgggtcaaaattgacccaaaatcacccctct 38384585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 32015274 - 32015198
Alignment:
Q  6 ttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||| ||||| |||| || ||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  32015274 ttattgaattatgatataaggaaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 32015198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 7073013 - 7073091
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| ||||| ||| | | | ||| ||||||||||||||| |||||| ||||||||||||||    
T  7073013 acttattcaattaggatagaaggaaaaccaattcgaaagggcgatttttgggtcaaaattgaccctaaatcacccctct 7073091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 34416823 - 34416904
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| || ||||||||| | |||||| |||||||| ||||||| |||||| || |||| ||||||    
T  34416823 atcacttattcaattaggatataaggaaaaacaattcggagggatgattttttggtcaaaattgaccttagatcatccctct 34416904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 36868063 - 36867986
Alignment:
Q  5 cttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||| |||||| |||||| ||||||||| |  ||||||||||||||| |||||| |||||| ||||||||||||||    
T  36868063 cttattgaattagaatagaaggaaaaacaattcagaggggtgatttttgagtcaaaattgaccctaaatcacccctct 36867986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 38535367 - 38535448
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| ||||||| |||||| || |   ||||||| ||||||||||||| |||||| ||||||||||||||    
T  38535367 atcacttattcaattatgatagaaggaaaaaaaattcaaaggggtgctttttgggtcaaaattgaccctaaatcacccctct 38535448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 4739385 - 4739310
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctc 81  Q
    ||||||| ||||||||| ||| ||||||||| | |||||||||||||| |||||||  |||||| |||||||||||||    
T  4739385 acttatttaattaggatggaaggaaaaacaactcggaggggtgattttggggtcaa--ttgaccctaaatcacccctc 4739310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 35333564 - 35333490
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatca 75  Q
    |||||||||||||||||||||| | ||||||||| |   ||||||||||||||||||||| |||| | |||||||    
T  35333564 atcacttattcaattaggatagcaggaaaaacaattcttaggggtgatttttgggtcaaaattgatcctaaatca 35333490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4604369 - 4604446
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||||||||||||| |||||| ||||||||| | | | | || |||||||||||||| |||||| ||||||||||    
T  4604369 atcacttattcaattagaatagaaggaaaaacaactcgaatgagtaatttttgggtcaaaattgaccttaaatcaccc 4604446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 34963128 - 34963208
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||| ||||| |||||||||||  || ||||||||||| ||||||| ||||||  |||| ||||||||    
T  34963128 atcacttattcaattagggtagaaggaaaaacaaatcaga-gggtgatttttaggtcaaaattgacccaaaattacccctct 34963208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 12891188 - 12891232
Alignment:
Q  38 ggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||    
T  12891188 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 12891232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 28261966 - 28262032
Alignment:
Q  12 aattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||| ||||||| ||||||||| | ||| | ||||||||||||||||| |||||| ||||||||||    
T  28261966 aattatgatagaaggaaaaacaattcggatgagtgatttttgggtcaaaattgaccctaaatcaccc 28262032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31908878 - 31908959
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||| ||||||| ||  |||||||| | ||| ||||||||||||| ||||| |||||  ||||||| ||||||    
T  31908878 atcacttattcaactaggataaaagaaaaaacaattcggaagggtgatttttggatcaaaattgactctaaatcatccctct 31908959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 11798582 - 11798653
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcac 76  Q
    ||||||| |||||||||| || ||||| |||   |||||||||||||| |||||||| |||||||||||||||    
T  11798582 acttatttaattaggatataaggaaaagcaacatggaggggtgatttt-gggtcaaaattgaccataaatcac 11798653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13879068 - 13879157
Alignment:
Q  1 atcacttattcaattaggatagaatgaa--------aaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| |||        |||||| | |||||||||||| |||||||||| |||||| ||||||| ||||||    
T  13879068 atcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcatccctct 13879157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14019193 - 14019282
Alignment:
Q  1 atcacttattcaattaggatagaatgaa--------aaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| |||        |||||| | |||||||||||| |||||||||| |||||| ||||||| ||||||    
T  14019193 atcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcatccctct 14019282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 4732130 - 4732059
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaa 72  Q
    |||||||||||||||||||||||| ||||  ||| ||  | |||||||||||| |||||| |||||| ||||    
T  4732130 atcacttattcaattaggatagaaggaaatgcaactaacaagggtgatttttgagtcaaaattgaccctaaa 4732059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 8799548 - 8799510
Alignment:
Q  145 ttataatgagttatttggtcgcttcactttaaattatgt 183  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  8799548 ttataatgagttatttggtcacttcattttaaattatgt 8799510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 34471025 - 34470952
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtg--atttttgggtcaaatttgaccataaa 72  Q
    |||||| ||||||||| ||||||| || |||||| | |||||||||  |||||||||||||| |||||| ||||    
T  34471025 atcactgattcaattaagatagaaagataaacaattcggaggggtgtgatttttgggtcaaaattgaccctaaa 34470952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 41361791 - 41361712
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  41361791 atcacttattcaattacggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccataaatcacccct 41361712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1810290 - 1810370
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||||    
T  1810290 atcacttattgaattaggatagaa-gaaaaaaaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 1810370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 37612712 - 37612631
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||| |||||||||| |||||| || | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  37612712 atcacttattcaactaggatagaaggaaaaaaaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 37612631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2025279 - 2025360
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||| ||| || ||||||||| | ||| ||||||||||| ||||||| |||||||||||||||||||||    
T  2025279 atcacttattcaattagaataaaaggaaaaacaacttggaagggtgattttttggtcaaaattgaccataaatcacccctct 2025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10338892 - 10338969
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||||||||||||||||| || ||||||||| | |||||||||||||||| |||||| |||||| ||||||||||    
T  10338892 atcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgcgtcaaaattgaccttaaatcaccc 10338969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24791238 - 24791319
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||| |||||||||| || ||||||||| | ||| || |||||||||||||||| |||||||||||||||||||||    
T  24791238 atcacttattgaattaggatataaggaaaaacaattcggatggatgatttttgggtcaaaattgaccataaatcacccctct 24791319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 10148006 - 10147924
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaa-caaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||||||  ||||| ||| | |||||||||||| |||||||||| |||||| ||||||||||||||    
T  10148006 atcacttattcaattaggatagaagaaaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcacccctct 10147924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 11161938 - 11161860
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||| || ||||||||| | | ||||||||||||||||||||| |||||| ||||| ||||||||    
T  11161938 acttattcaattaggatataaagaaaaacaacttgaaggggtgatttttgggtcaaaattgaccctaaattacccctct 11161860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30026950 - 30027031
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| |||||||  |||||||| | ||| |||||||||||||||||||  ||||| ||||||||||||||    
T  30026950 atcacttattcaattatgatagaagaaaaaacaactcggatgggtgatttttgggtcaaaaatgaccctaaatcacccctct 30027031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39067759 - 39067840
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||| ||||||||||||| ||||||||| | |||   ||||||||||||||||| |||||| ||||||||||||||    
T  39067759 atcacttattaaattaggatagaaggaaaaacaatttggaacagtgatttttgggtcaaaattgaccttaaatcacccctct 39067840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14600768 - 14600849
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||| |||||||||||||||||||  |||||||| | ||| || |||||||||||||||| |||||| ||||||||| ||||    
T  14600768 atcagttattcaattaggatagaagaaaaaacaactcggatggatgatttttgggtcaaaattgaccctaaatcacctctct 14600849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31202517 - 31202440
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||||||||||||  |||||| ||||||||| | ||| || |||||||||||||||| |||||| ||||||||||    
T  31202517 atcacttattcaattataatagaaagaaaaacaatttggatggatgatttttgggtcaaaattgaccttaaatcaccc 31202440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31407818 - 31407899
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||| |||||||| || ||||||| ||||||||| | |||| | |||||||||||||||| |||||| ||||||||||||||    
T  31407818 atcatttattcaactatgatagaaggaaaaacaattcggagagatgatttttgggtcaaaattgaccctaaatcacccctct 31407899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2234540 - 2234617
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||||||||| |||||||||| ||||||||| | | ||||||||||||||| ||||| || ||| || |||||||    
T  2234540 atcacttattcaactaggatagaaggaaaaacaattcgaaggggtgatttttggatcaaaattaaccctagatcaccc 2234617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9501649 - 9501572
Alignment:
Q  1 atcacttattcaattaggatagaatg-aaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacc 77  Q
    |||||||||||||||||||||||| | |||||||| |  || ||||||||||||| ||||| |||||| |||||||||    
T  9501649 atcacttattcaattaggatagaaggaaaaaacaattcagatgggtgatttttggatcaaaattgaccctaaatcacc 9501572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13570796 - 13570877
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||| ||||||||||||||||||||||| | ||| |  |||||||| | ||||| |||||  ||||||||||||||    
T  13570796 atcacttatttaattaggatagaatgaaaaacaattgggatgaatgatttttagatcaaaattgactctaaatcacccctct 13570877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1039963 - 1040037
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatca 75  Q
    |||||||||| |||||| |||||| ||||| ||| | ||| ||||||||||||| ||||| |||||| |||||||    
T  1039963 atcacttattgaattagaatagaaggaaaaccaattcggatgggtgatttttggatcaaaattgaccttaaatca 1040037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12329685 - 12329608
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||||||||||||||||| || ||||||||| | | |  |||||||||||| ||||| |||||  ||||||||||    
T  12329685 atcacttattcaattaggataaaaggaaaaacaattcgaaatggtgatttttggatcaaaattgactctaaatcaccc 12329608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23971164 - 23971245
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||| |||||| ||||||||| | ||| | ||||||||| ||||||| || ||  ||||||||| ||||    
T  23971164 atcacttattcaattagaatagaaggaaaaacaactcggatgagtgattttttggtcaaaatttactttaaatcacctctct 23971245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 7583859 - 7583915
Alignment:
Q  26 gaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||| | ||| ||||||||||||||||||| |||| | ||||||||||||||    
T  7583859 gaaaaacaactcggatgggtgatttttgggtcaaaattgatcctaaatcacccctct 7583915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 31308207 - 31308120
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaaca------aataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||      | | |||| |||||||||| | ||||| |||||| ||||||||||||||    
T  31308207 atcacttattcaattaggatagaaggaaaaacaactcggagtcggagaggtgatttttagatcaaaattgaccttaaatcacccctct 31308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30039402 - 30039476
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcac 76  Q
    ||||| ||||||||||| | |||| ||||||||| | ||| | |||||||| |||||||| |||||||||||||||    
T  30039402 atcacatattcaattagaaaagaaggaaaaacaattcggatgagtgatttt-gggtcaaaattgaccataaatcac 30039476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 13576257 - 13576326
Alignment:
Q  12 aattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||| ||||||||| | |||||| ||| |||| ||||||| |||| | ||||||||||||||    
T  13576257 aattaggatagaaagaaaaacaactcggagggatga-ttttaggtcaaaattgatcctaaatcacccctct 13576326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 10334232 - 10334159
Alignment:
Q  2 tcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatca 75  Q
    ||||||||| ||||||||||||| ||||||||| |   | | ||||||||||| ||||| |||||| |||||||    
T  10334232 tcacttatttaattaggatagaaggaaaaacaactcatatgagtgatttttggatcaaaattgaccctaaatca 10334159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 24699848 - 24699812
Alignment:
Q  42 gggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  24699848 gggtgatttttgggtcaaaattgaccctaaatcaccc 24699812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42603831 - 42603912
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| ||||||||||||||||| | |||||||||||||||| |||||| |||||||||||||||| ||||    
T  42603831 atcacttattcaattatgatagaatgaaaaacaattcggaggggtgatttttgagtcaaaattgaccataaatcaccgctct 42603912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5684424 - 5684345
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||||||||||||||||||||||||||||| | |||| ||||||||||| |||||| |||||| ||||||||||||    
T  5684424 atcacttattcaattaggatagaatgaaaaacaattcggagaggtgatttttgcgtcaaaattgaccctaaatcacccct 5684345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5709474 - 5709395
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||||||||||||||||||||||||||||| | |||| ||||||||||| |||||| |||||| ||||||||||||    
T  5709474 atcacttattcaattaggatagaatgaaaaacaattcggagaggtgatttttgcgtcaaaattgaccctaaatcacccct 5709395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28664974 - 28665051
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||| |||||||| |||||| ||||||||||    
T  28664974 atcacttattcaattaggatagaaggaaaaacaactcggaggggtgattttagggtcaaaattgaccctaaatcaccc 28665051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9785376 - 9785297
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||||||||||| ||||||| ||||||||| | | ||||||||||||||||||||| |||||| ||||||||||||    
T  9785376 atcacttattcaattaagatagaaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccct 9785297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22747570 - 22747648
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||||||||||||||||||| ||||| ||| | ||||||||||||||||||||||| |||||| ||||||||||||    
T  22747570 atcacttattcaattaggatagaaggaaaa-caacttggaggggtgatttttgggtcaaaattgaccctaaatcacccct 22747648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11833078 - 11832996
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggagggg-tgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||| |||| ||||||||| | ||||||| |||||||||||||||| |||||||||||||| ||||||    
T  11833078 atcacttattcaattaggaaagaaggaaaaacaattcggagggggtgatttttgggtcaaaattgaccataaatcatccctct 11832996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17473785 - 17473863
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccc 79  Q
    ||||||||||||||||||||| || ||||||||| | ||||||||||||||| ||||||| |||||| |||||||||||    
T  17473785 atcacttattcaattaggataaaaggaaaaacaattcggaggggtgattttttggtcaaaattgaccctaaatcacccc 17473863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17579429 - 17579351
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccc 79  Q
    ||||||||||||||||||||| || ||||||||| | ||||||||||||||| ||||||| |||||| |||||||||||    
T  17579429 atcacttattcaattaggataaaaggaaaaacaattcggaggggtgattttttggtcaaaattgaccctaaatcacccc 17579351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 46026094 - 46026172
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| ||||||||| | ||| | ||||||||||||||||| |||||| ||||||||||||||    
T  46026094 acttattcaattaggatagaaggaaaaacaattcggatgtgtgatttttgggtcaaaattgaccctaaatcacccctct 46026172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36579374 - 36579455
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||| |||||||||| ||||||||| | |||||||||||||| |||||||| |||||| ||||||| ||||||    
T  36579374 atcacttattcaactaggatagaaggaaaaacaattcggaggggtgattttcgggtcaaaattgaccctaaatcatccctct 36579455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45457618 - 45457699
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| ||||||| ||||||||| | ||||| |||||||||| |||||| |||||| ||||||||||||||    
T  45457618 atcacttattcaattaagatagaaggaaaaacaattcggaggagtgatttttgcgtcaaaattgaccctaaatcacccctct 45457699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 48304457 - 48304538
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||| | ||||| ||| | ||| ||||||||||||||||||| |||||| ||||||||||||||    
T  48304457 atcacttattcaattaggatagcaggaaaagcaattcggatgggtgatttttgggtcaaaattgaccctaaatcacccctct 48304538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 21603521 - 21603441
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| |  |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  21603521 atcacttattcaattaggatagaaggaaaaacaattcagaggggtgcttttt-ggtcaaaattgaccctaaatcacccctct 21603441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 45482123 - 45482042
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||| ||||||||||||| ||||||||  | |||||||||||||| |||||||| |||||| |||||||| |||||    
T  45482123 atcacttatttaattaggatagaaggaaaaacagctcggaggggtgattttggggtcaaaattgaccctaaatcactcctct 45482042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 10574435 - 10574363
Alignment:
Q  6 ttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||| || ||||||||| | |||||||||||||||| |||||| |||||| ||||||||||    
T  10574435 ttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgagtcaaaattgaccctaaatcaccc 10574363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 21990721 - 21990639
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaa-caaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||| | |||||| ||| | |||||||||||||||  |||||| |||||| ||||||||||||||    
T  21990721 atcacttattcaattaggatagcaggaaaaaacaattcggaggggtgatttttcagtcaaaattgaccctaaatcacccctct 21990639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1281199 - 1281276
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||||||||||||| ||| |||||||||||| | ||| ||||||||||| ||||||| | |||| ||||||||||    
T  1281199 atcacttattcaattagaatataatgaaaaacaattcggatgggtgattttttggtcaaaatggaccctaaatcaccc 1281276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27535515 - 27535434
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||| ||||||| |||||| ||||||||| | ||| ||||||||||||| | ||| |||||| ||||||||||||||    
T  27535515 atcacttatacaattagaatagaaggaaaaacaattcggatgggtgatttttggataaaaattgaccctaaatcacccctct 27535434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39533037 - 39533114
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||| ||||||| ||||||||| |  ||| | |||||||||||||||| |||||| ||||||||||    
T  39533037 atcacttattcaattaagatagaaggaaaaacaattcagagagatgatttttgggtcaaaattgaccctaaatcaccc 39533114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6667455 - 6667373
Alignment:
Q  1 atcacttattcaa-ttaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||| |||| ||||||  |||||||| | || |||||||||||||||||||| |||||| |||||||| |||||    
T  6667455 atcacttattcaaattagaatagaagaaaaaacaattcggtggggtgatttttgggtcaaaattgaccctaaatcactcctct 6667373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17509266 - 17509346
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| || |||||| || | |||||| |||||||| ||||||| |||||| ||||||| ||||||    
T  17509266 atcacttattcaattaggataaaaggaaaaataattcggaggg-tgattttttggtcaaaattgaccctaaatcatccctct 17509346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17543948 - 17543868
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| || |||||| || | |||||| |||||||| ||||||| |||||| ||||||| ||||||    
T  17543948 atcacttattcaattaggataaaaggaaaaataattcggaggg-tgattttttggtcaaaattgaccctaaatcatccctct 17543868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 42644735 - 42644654
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| |   | | |||||||||| |||||| |||| | ||||||||||||||    
T  42644735 atcacttattcaattaggatagaaggaaaaacaattcaaatgagtgatttttgagtcaaaattgatcctaaatcacccctct 42644654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3266447 - 3266360
Alignment:
Q  1 atcacttattcaattaggatagaatgaa------aaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| |||      |||||| | |||||| ||||| |||| ||||| |||||||||||||||||||||    
T  3266447 atcacttattcaattaggatagaaggaagaaaaaaaacaactcggagggatgattattggatcaaaattgaccataaatcacccctct 3266360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 2622648 - 2622586
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgac 66  Q
    ||||||||||||| ||||||| ||||||||| | ||| | ||||||||||||||||| |||||    
T  2622648 acttattcaattaagatagaaggaaaaacaattcggatgcgtgatttttgggtcaaaattgac 2622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32740812 - 32740734
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgat-ttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||||||||||| ||||||||| | |  |||||||| |||| ||||||| |||||  ||||||||||    
T  32740812 atcacttattcaattaggatagaaggaaaaacaattcgagggggtgatttttttggtcaaaattgactctaaatcaccc 32740734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 39707345 - 39707272
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||| ||||||||||||| ||||||||| | |||| | ||| |||||||||||| |||||| ||||||||||    
T  39707345 acttatttaattaggatagaaagaaaaacaactcggagtgatga-ttttgggtcaaaattgaccctaaatcaccc 39707272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41288017 - 41287935
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaa-taggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||| |||||||||||||||||| ||||||   | | ||| |||||||| |||||||||| |||||| ||||||||||||||    
T  41288017 atcacctattcaattaggatagaaggaaaaaatcactcggatgggtgattattgggtcaaaattgaccctaaatcacccctct 41287935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21954881 - 21954957
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||| ||||| ||||||||||||||||||||||| | ||| | |||| |||||||| ||| |||||| ||||||||||    
T  21954881 atcatttatttaattaggatagaatgaaaaacaactcggatgagtga-ttttgggttaaaattgaccctaaatcaccc 21954957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 36719628 - 36719680
Alignment:
Q  26 gaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||||||| | ||||||||||||||||| ||||| |||||| ||||||||||    
T  36719628 gaaaaacaattcggaggggtgatttttggatcaaaattgaccctaaatcaccc 36719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 40761611 - 40761567
Alignment:
Q  38 ggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||    
T  40761611 ggaggggtgatttttgggtcaaaattgaccctaaatcatccctct 40761567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 43244443 - 43244524
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||||| |||||| ||||||||||||||    
T  43244443 atcacttattcaattaggatagaaggaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctct 43244524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 394336 - 394416
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctc 81  Q
    |||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||| |||||||||||||    
T  394336 atcacttattgaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctc 394416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31522041 - 31521962
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||| |||||| ||||||||||||    
T  31522041 atcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttaggtcaaaattgaccctaaatcacccct 31521962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7060383 - 7060302
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| ||| |||||| ||||| ||||||||    
T  7060383 atcacttattcaattaggatagaaggaaaaacaattcggaggggtgatttttgggttaaaattgaccctaaattacccctct 7060302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22757153 - 22757072
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| | |||| ||||||||||| |||||| |||||| ||||||||||||||    
T  22757153 atcacttattcaattaggatagaaggaaaaacaattcggagtggtgatttttgagtcaaaattgaccctaaatcacccctct 22757072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29268839 - 29268920
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| || ||||||||| | |||||||||||||| |||||||| |||||| ||||||||||||||    
T  29268839 atcacttattcaattaggataaaaggaaaaacaactcggaggggtgattttagggtcaaaattgaccttaaatcacccctct 29268920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44757104 - 44757185
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| | | | ||||||||||||||||||| |||||| ||||||||||||||    
T  44757104 atcacttattcaattaggatagaaggaaaaacaactcgaatgggtgatttttgggtcaaaattgaccttaaatcacccctct 44757185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 51152184 - 51152105
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||||  |||||| ||||||||||||    
T  51152184 atcacttattaaattaggatagaaggaaaaacaattcggaggggtgatttttgggtcaatattgaccntaaatcacccct 51152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8712589 - 8712510
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||| |||| |||||||||| ||||||||| || |||||||||||||||||||||| |||||| ||||||||||||    
T  8712589 atcacttactcaactaggatagaaggaaaaacaattatgaggggtgatttttgggtcaaaattgaccctaaatcacccct 8712510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13965619 - 13965545
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatca 75  Q
    |||||||||||||||||||||||| ||||||||| | | ||||||||||||||||||||| |||||| |||||||    
T  13965619 atcacttattcaattaggatagaaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatca 13965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 478074 - 478154
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| || ||||||||| | ||| || |||||||||||||||| |||||||||||||||||||||    
T  478074 atcacttattcaattaggatataaggaaaaacaattcggatgg-tgatttttgggtcaaaattgaccataaatcacccctct 478154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6911739 - 6911658
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| | ||||| ||||||||||| |||| |||||||||||| ||||| |||||| ||||||||||||||    
T  6911739 atcacttattcaattaaggtagaaggaaaaacaaatcggagaggtgatttttggatcaaaattgaccctaaatcacccctct 6911658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24568775 - 24568856
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| |||||| || | ||| ||||||||||||||||||| || ||| ||||||||||||||    
T  24568775 atcacttattcaattaggatagaaggaaaaataattcggaagggtgatttttgggtcaaaattcaccctaaatcacccctct 24568856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 24825708 - 24825627
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| | ||||| ||||||||| ||||||| |||| | ||||||||||||||    
T  24825708 atcacttattcaattaggatagaaggaaaaacaactcggaggagtgatttttaggtcaaaattgatcctaaatcacccctct 24825627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30202097 - 30202016
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| |||| || ||||||||| ||| ||||||||||||||| ||||| |||||| ||||||||||||||    
T  30202097 atcacttattcaattaagataaaaggaaaaacaactagaaggggtgatttttggatcaaaattgaccttaaatcacccctct 30202016  T

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Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24611861 - 24611942
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| | ||||  | |  ||||||||||||||||||| || |||||||||||||||||||||    
T  24611861 atcacttattcaattaggatagaagggaaaatgacttagaggggtgatttttgggtctaaattgaccataaatcacccctct 24611942  T

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Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26742525 - 26742602
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||| ||||||| ||||||||| | ||| ||||||||||||||||||| |||| | ||||||||||    
T  26742525 atcacttattcaattaagatagaaagaaaaacaattcggatgggtgatttttgggtcaaaattgatcctaaatcaccc 26742602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 27394886 - 27394810
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    ||||||||||||||||||||| |||||| ||   ||| ||||||||||||||||||| |||||| ||||||||||||    
T  27394886 acttattcaattaggatagaaggaaaaataatccggaagggtgatttttgggtcaaaattgaccctaaatcacccct 27394810  T

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Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39837654 - 39837572
Alignment:
Q  1 atcacttattcaattaggatagaatg-aaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| || | ||||| |||| | ||||||||||||||||||||| |||||  ||||||||||||||    
T  39837654 atcacttattcaattaggataaaagggaaaaaaaaatcgaaggggtgatttttgggtcaaaattgacgctaaatcacccctct 39837572  T

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Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 24100198 - 24100117
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| ||||||| ||||||||| | ||| |||| |||||||| ||||| |||| | ||||||||||||||    
T  24100198 atcacttattcaattacgatagaaggaaaaacaattcggatgggtaatttttggttcaaaattgatcctaaatcacccctct 24100117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 25658226 - 25658145
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||| |||||||| |||| ||||||||| | |||| ||||||||||| |||||| || ||| ||||||||||||||    
T  25658226 atcacttattaaattaggaaagaaggaaaaacaatttggagaggtgatttttgagtcaaaattaaccctaaatcacccctct 25658145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26674431 - 26674354
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||| ||||||| ||||| ||| | ||||||||||||||| ||||||| |||| | ||||||||||    
T  26674431 atcacttattcaattatgatagaaggaaaagcaatttggaggggtgatttttaggtcaaaattgatcctaaatcaccc 26674354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29922896 - 29922812
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaa---caaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||   ||| | |||||||||||| || ||||||| |||||| ||||||||| ||||    
T  29922896 atcacttattcaattaggatagaaagaaaaaaaacaacttggaggggtgattattaggtcaaaattgaccctaaatcacctctct 29922812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38944209 - 38944275
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgacc 67  Q
    ||||||||||||| || ||||||| ||||||||| | |||||||||||||||||| |||| ||||||    
T  38944209 atcacttattcaactacgatagaaggaaaaacaatttggaggggtgatttttgggccaaaattgacc 38944275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 5814403 - 5814330
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacc 77  Q
    ||||||||||||| ||||||| | ||||||| | |||||| |||||||||| ||||| |||||| |||||||||    
T  5814403 acttattcaattaagatagaagggaaaacaacttggagggatgatttttggatcaaaattgaccctaaatcacc 5814330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7084265 - 7084184
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| | ||||| ||||||||||| ||| |  | |||||||||||||| |||| | ||||||||||||||    
T  7084265 atcacttattcaattaaggtagaaggaaaaacaaatcggaagcataatttttgggtcaaaattgaacctaaatcacccctct 7084184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11210375 - 11210456
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| ||| | | |||||| || | ||||||||||||||| || |||| |||||| ||||||||||||||    
T  11210375 atcacttattcaattatgatgggaggaaaaataattcggaggggtgatttttagggcaaaattgaccctaaatcacccctct 11210456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20399965 - 20400038
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatc 74  Q
    ||||||||||||||||||||||||  |||| ||| | ||  ||||||||||||||||||| |||||| ||||||    
T  20399965 atcacttattcaattaggatagaagaaaaagcaattcgggtgggtgatttttgggtcaaaattgaccctaaatc 20400038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22049467 - 22049543
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||||||||||| ||||||||| | | | |||||| |||||||||||| || ||| ||||||||||    
T  22049467 atcacttattcaattaggatagaaggaaaaacaattcgaaagggtga-ttttgggtcaaaattaaccctaaatcaccc 22049543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7083878 - 7083950
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaat 73  Q
    |||||||||||||||| ||||||| ||||||||| |   ||||||||||||||| ||||| |||||| |||||    
T  7083878 atcacttattcaattatgatagaaggaaaaacaattcataggggtgatttttggatcaaaattgaccctaaat 7083950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 626610 - 626690
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| ||||||| |||||| || |  || ||||||||||||||||||| ||  || ||||||||||||||    
T  626610 atcacttattcaattatgatagaa-gaaaaataattcagatgggtgatttttgggtcaaaattagccctaaatcacccctct 626690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6882015 - 6881958
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtca 58  Q
    |||||||||| ||||||||||||| |||||| || | | |||||||||||||||||||    
T  6882015 atcacttatttaattaggatagaaggaaaaataactcgaaggggtgatttttgggtca 6881958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7861267 - 7861344
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||| ||||||||||||| |||||| || |  ||| |||||||||||||||||| ||||   ||||||||||    
T  7861267 atcacttatttaattaggatagaaggaaaaataattcagagtggtgatttttgggtcaaaattgattctaaatcaccc 7861344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19745448 - 19745369
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||| |||||||||||||||| ||  |||||||| | ||| |  |||||||||||||||| |||| | ||||||||||||    
T  19745448 atcaattattcaattaggataaaagcaaaaacaattcggatgaatgatttttgggtcaaaattgatcctaaatcacccct 19745369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19794358 - 19794437
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||| |||||||||||||||| ||  |||||||| | ||| |  |||||||||||||||| |||| | ||||||||||||    
T  19794358 atcaattattcaattaggataaaagcaaaaacaattcggatgaatgatttttgggtcaaaattgatcctaaatcacccct 19794437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43493349 - 43493394
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtg 46  Q
    |||||||||||||||| ||||||| ||||||||| | |||||||||    
T  43493349 atcacttattcaattaagatagaaggaaaaacaattcggaggggtg 43493394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12717180 - 12717255
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacc 77  Q
    |||||||||| |||||||||||||  |||||||| | ||| || ||| |||||||||||| |||||  |||||||||    
T  12717180 atcacttatttaattaggatagaagaaaaaacaagtcggacggatga-ttttgggtcaaaattgactctaaatcacc 12717255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20887817 - 20887889
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaat 73  Q
    |||||||||| ||||| |||||||  || || || | ||| ||||||||||||||||||| |||||| |||||    
T  20887817 atcacttattgaattaagatagaaaaaataataattcggatgggtgatttttgggtcaaaattgaccttaaat 20887889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3457002 - 3456921
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| | |||| |||||||||||| ||||| |||||||||||||||||||||    
T  3457002 atcacttattcaattaggatagaaggaaaaacaattcggagaggtgatttttggatcaaaattgaccataaatcacccctct 3456921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11819142 - 11819061
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||    
T  11819142 atcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 11819061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36691869 - 36691950
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| |||||| || | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  36691869 atcacttattcaattaggatagaaggaaaaataactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 36691950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 48652510 - 48652591
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||    
T  48652510 atcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaagttgaccctaaatcacccctct 48652591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1074963 - 1075044
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||| ||| || ||||||||| | ||| ||||||||||||||||||| |||||||||||||||||||||    
T  1074963 atcacttattcaattagaatataaggaaaaacaactcggatgggtgatttttgggtcaaaattgaccataaatcacccctct 1075044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31462816 - 31462897
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| || ||||||||| | | ||||||||||||||||||||| |||||| ||||||||||||||    
T  31462816 atcacttattcaattaggatataaggaaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccctct 31462897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14585521 - 14585440
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| |  |||| ||||||||||||||||| |||||  ||||||||||||||    
T  14585521 atcacttattcaattaggatagaaggaaaaacaatttagaggagtgatttttgggtcaaaattgactctaaatcacccctct 14585440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30156352 - 30156432
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| || ||||| ||| | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  30156352 atcacttattcaattaggataaaaggaaaa-caattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 30156432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31270385 - 31270308
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||||||||||| |||||| || | | ||||||||||||||||||||| |||||| ||||||||||    
T  31270385 atcacttattcaattaggatagaaggaaaaataattcgaaggggtgatttttgggtcaaaattgaccctaaatcaccc 31270308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32080824 - 32080901
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    ||||| |||||||||| | ||||| ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  32080824 atcacctattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcaccc 32080901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 4206583 - 4206662
Alignment:
Q  3 cacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||| |  ||||||||| | ||||||||||||||| | ||||| |||||||||||||||||||||    
T  4206583 cacttattcaattaggatatatggaaaaacaattcggaggggtgattttttgatcaaaattgaccataaatcacccctct 4206662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13702042 - 13702123
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| ||||||| |||||| || | | |||||||| |||||||||||| |||||| ||||||||||||||    
T  13702042 atcacttattcaattatgatagaaagaaaaataattcgaaggggtgacttttgggtcaaaattgaccctaaatcacccctct 13702123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 34960928 - 34961009
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||| ||||||  |||||||| |  |||||||||||||||||||||| |||||| ||| ||||||||||    
T  34960928 atcacttattcaattagaatagaagaaaaaacaattctgaggggtgatttttgggtcaaaattgaccctaagtcacccctct 34961009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 53155500 - 53155581
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||| |||||||||| || ||||||||| | | | ||||||||||||||||||| |||||| ||||||||||||||    
T  53155500 atcacttattgaattaggatataaggaaaaacaattcgaatgggtgatttttgggtcaaaattgaccctaaatcacccctct 53155581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 53402689 - 53402614
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcac 76  Q
    |||||||||| |||||| |||||| ||||||||| | ||| ||||||||||||||||||| |||||| ||||||||    
T  53402689 atcacttattgaattagaatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcac 53402614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 54239088 - 54239167
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||||||||||||||||||| ||||||||| | ||| | ||||||||| | |||||||| ||| ||||||||||||    
T  54239088 atcacttattcaattaggatagaaggaaaaacaattcggatgtgtgattttttgatcaaatttaaccttaaatcacccct 54239167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 49628157 - 49628239
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttga-ccataaatcacccctct 82  Q
    ||||||||||||| |||||||||| ||||||||| |  |||||||||||||| ||||||| |||| ||| |||||||||||||    
T  49628157 atcacttattcaactaggatagaaggaaaaacaattcagaggggtgatttttaggtcaaaattgacccaaaaatcacccctct 49628239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 55090653 - 55090734
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||| ||||| | ||||| ||||||||||| |||||||||||||||||||  || || ||| ||||||||||||||    
T  55090653 atcacttatttaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggttgaaattaaccctaaatcacccctct 55090734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39610271 - 39610182
Alignment:
Q  1 atcacttattcaattaggatagaatgaa--------aaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| |||        |||||| | |||||||||||| |||||||||| |||||||||||||||||||||    
T  39610271 atcacttattcaattaggatagaaggaagaaaaaaaaaacaactcggaggggtgattattgggtcaaaattgaccataaatcacccctct 39610182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 35174763 - 35174684
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||||||||||||||||||| ||||||||| |   |||||||||||||||||| || |||||| | ||| ||||||    
T  35174763 atcacttattcaattaggatagaaggaaaaacaattcaaaggggtgatttttgggtcgaaattgacccttaataacccct 35174684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 27189467 - 27189545
Alignment:
Q  4 acttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| ||||||||| | ||| | || |||||||| ||||| |||||  ||||||||||||||    
T  27189467 acttattcaattaggatagaaggaaaaacaattcggaagagtaatttttggatcaaaattgactctaaatcacccctct 27189545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36624764 - 36624845
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||| | ||||||||||| ||||||||| | ||| |||||||||||||||||   |||||| | ||||||||||||    
T  36624764 atcacttatttagttaggatagaaggaaaaacaattcggatgggtgatttttgggtcatgattgaccctgaatcacccctct 36624845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 48400958 - 48400877
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||| || |||| ||||| ||||||||| |  || | ||||||||||||||||| |||||| ||||||||||||||    
T  48400958 atcacttattaaaatagggtagaaggaaaaacaattccgatgtgtgatttttgggtcaaaattgaccctaaatcacccctct 48400877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 22485024 - 22484965
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaa 60  Q
    |||||||||||||||||||||||| |||||||||   ||| | |||||||||||||||||    
T  22485024 atcacttattcaattaggatagaaggaaaaacaatccggaagagtgatttttgggtcaaa 22484965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24483748 - 24483813
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgac 66  Q
    |||||||||||||||| ||||||||||||||||| |  || ||||||||| || |||||| |||||    
T  24483748 atcacttattcaattatgatagaatgaaaaacaattcagatgggtgatttgtgtgtcaaaattgac 24483813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38527322 - 38527241
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||| ||||||||||| ||||||| ||||||||| | ||| | ||||||||||| ||||  |||| | ||||||||||||||    
T  38527322 atcatttattcaattaagatagaaggaaaaacaatttggatgtgtgatttttggttcaagattgatcctaaatcacccctct 38527241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40013342 - 40013421
Alignment:
Q  1 atcacttattcaattagga---tagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacc 77  Q
    |||||||||||||||||||   ||||| ||||||||| | | | ||||||||||||||||||| |||||  |||||||||    
T  40013342 atcacttattcaattaggaggatagaaggaaaaacaattcgaatgggtgatttttgggtcaaaattgacactaaatcacc 40013421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 4512853 - 4512893
Alignment:
Q  153 agttatttggtcgcttcactttaaattatgtttgacccatt 193  Q
    ||||||||||||||||||||||||||||||| | |||||||    
T  4512853 agttatttggtcgcttcactttaaattatgtctaacccatt 4512893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 48854939 - 48854889
Alignment:
Q  27 aaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacc 77  Q
    |||||||||| ||||||||||||||||||| ||| ||||||  ||||||||    
T  48854939 aaaaacaaatcggaggggtgatttttgggttaaaattgacccaaaatcacc 48854889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 49628238 - 49628194
Alignment:
Q  39 gaggggtgatttttgggtcaaatttgacc-ataaatcacccctct 82  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||    
T  49628238 gaggggtgatttttgggtcaattttgacctaaaaatcacccctct 49628194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1148 - 1229
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||| ||||| ||||||||| | | ||||||||||||||||||||| |||||| ||||||||||||||    
T  1148 atcacttattcaattagggtagaaggaaaaacaattcgcaggggtgatttttgggtcaaaattgaccttaaatcacccctct 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6419920 - 6420001
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| |  |||||||||||||||| ||||| |||||| ||||||||||||||    
T  6419920 atcacttattcaattaggatagaaggaaaaacaactcagaggggtgatttttggatcaaaattgaccctaaatcacccctct 6420001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12481432 - 12481513
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||| |||| | ||||||||||||||    
T  12481432 atcacttattcaattaaggtagaaggaaaaacaaatcggaggggtgatttttgggtcaaaattgatcctaaatcacccctct 12481513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15590141 - 15590222
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||||||  |||||||| |  |||||||||||||||||||||| |||||| ||||||||||||||    
T  15590141 atcacttattcaattaggatagaagaaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctct 15590222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21507870 - 21507951
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||| |||||||||| ||||||||| | ||||||||||| ||||||||||| |||||| ||||||||||||||    
T  21507870 atcacttattcaactaggatagaaggaaaaacaatttggaggggtgatgtttgggtcaaaattgaccctaaatcacccctct 21507951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14783233 - 14783314
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||| |||||||||| ||||||||| | ||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  14783233 atcacttattcaactaggatagaaggaaaaacaattcggaggcgtgatttttgggtcaaaattgaccctaaatcagccctct 14783314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 29927447 - 29927516
Alignment:
Q  7 tattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcac 76  Q
    |||||||||||||||||| ||||||||| | ||||| ||||||||||||||||| |||||||||||||||    
T  29927447 tattcaattaggatagaaggaaaaacaacttggaggagtgatttttgggtcaaaattgaccataaatcac 29927516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31937481 - 31937557
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcaccc 78  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||  ||||| ||||||||||    
T  31937481 atcacttattcaattaggatagaa-gaaaaacaattcggaggggtgatttttgggtcaaaactgaccctaaatcaccc 31937557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8693719 - 8693803
Alignment:
Q  1 atcacttattcaattagga---tagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||   ||||| ||||||||| | ||| ||||||||||||||||||| |||||| ||||||||||||||    
T  8693719 atcacttattcaattaggaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcacccctct 8693803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23654309 - 23654228
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||| ||| | ||||| ||||||||||| ||| ||||||||||||||||||| |||||| ||||||||| ||||    
T  23654309 atcacttattcagttaaggtagaaggaaaaacaaatcggatgggtgatttttgggtcaaaattgaccctaaatcacctctct 23654228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 35219966 - 35220045
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctc 81  Q
    ||||||||||| ||| |||||||| ||||| ||| | |||||||||||||||| |||||| |||||| |||||||||||||    
T  35219966 atcacttattcgattcggatagaaggaaaa-caacttggaggggtgatttttgagtcaaaattgaccctaaatcacccctc 35220045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 4921943 - 4922023
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaaca--aataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    |||||||||||||||| ||||||| |||||| |  | | |||||||| |||||||||||||| |||||| ||||||||||||    
T  4921943 atcacttattcaattaagatagaaggaaaaaaactactgggaggggt-atttttgggtcaaaattgaccctaaatcacccct 4922023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2304872 - 2304953
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||| || |||| | ||||||| |  ||||| |||||||||||||||| | || | ||||||||||||||    
T  2304872 atcacttattcaattatgacagaagggaaaacaactcagagggttgatttttgggtcaaaatcgatcctaaatcacccctct 2304953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 4085060 - 4084996
Alignment:
Q  18 gatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||| ||||||||| | ||| || |||||||| ||||||| |||||| ||||||||||||||    
T  4085060 gatagaaggaaaaacaattcggaaggatgatttttcggtcaaaattgaccctaaatcacccctct 4084996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19402870 - 19402950
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctc 81  Q
    ||||||| |||||||| |||| || ||||||||| |   ||||||||||||||| |||||  |||||  ||||||||||||    
T  19402870 atcacttgttcaattatgatacaaggaaaaacaactcaaaggggtgatttttggatcaaaagtgacccgaaatcacccctc 19402950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35141 - 35065
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacc 77  Q
    |||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||| |||||| |||||||||    
T  35141 atcacttattcaattaggatagaaggaaaaacaactcggatgggtgatttttgggtcaaaattgaccctaaatcacc 35065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 2961 - 2878
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaa--caaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||  ||| | |||||||||||| |||||||||| |||||| ||||||||||||||    
T  2961 atcacttattcaattaggatagaaggaaaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcacccctct 2878  T

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Target: scaffold0321 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7186 - 7252
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgacc 67  Q
    ||||||||||||||||||||| || ||||||||| | ||||||||||||||||||||||||| ||||    
T  7186 atcacttattcaattaggataaaaggaaaaacaattcggaggggtgatttttgggtcaaattggacc 7252  T

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Target: scaffold0056 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 74223 - 74142
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||||| ||||   |||||||| |||||    
T  74223 atcacttattcaattaggatagaaggaaaaacaattcggatgggtgatttttgggtcaaaattgattctaaatcactcctct 74142  T

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Target: scaffold0001 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 404320 - 404401
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    |||||||||||||||||||||| | ||||||| | | ||| ||||||||||||| ||||| |||||| |||||| |||||||    
T  404320 atcacttattcaattaggatagcaagaaaaactattcggatgggtgatttttggatcaaaattgaccttaaatcgcccctct 404401  T

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Target: scaffold0432 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2479 - 2557
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaataggaggggtgatttttgggtcaaatttgaccataaatcacccct 80  Q
    ||||||||||| |||| ||||||| ||||||||| |  ||||| ||||||||||||||||  ||||| ||||||||||||    
T  2479 atcacttattcgattatgatagaaggaaaaacaactcagaggg-tgatttttgggtcaaaaatgaccctaaatcacccct 2557  T

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Target: scaffold0121 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13307 - 13392
Alignment:
Q  1 atcacttattcaattaggatagaatgaaaaacaaata----ggaggggtgatttttgggtcaaatttgaccataaatcacccctct 82  Q
    ||||||||||||||||||||| ||  ||||| ||| |    ||||||||||||||||| ||||| |||||| ||||||||| ||||    
T  13307 atcacttattcaattaggataaaaaaaaaaaaaaacaattcggaggggtgatttttggatcaaaattgaccctaaatcacctctct 13392  T

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