View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8901_low_1 (Length: 1186)

Name: NF8901_low_1
Description: NF8901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8901_low_1
NF8901_low_1
[»] chr8 (17 HSPs)
chr8 (291-625)||(29722216-29722550)
chr8 (413-501)||(13638290-13638378)
chr8 (413-501)||(13738703-13738791)
chr8 (794-886)||(39432332-39432426)
chr8 (388-516)||(42240320-42240448)
chr8 (765-888)||(220338-220462)
chr8 (765-888)||(689493-689617)
chr8 (765-888)||(733961-734085)
chr8 (765-888)||(857857-857981)
chr8 (839-888)||(7345423-7345472)
chr8 (765-888)||(16808335-16808461)
chr8 (775-883)||(14011024-14011133)
chr8 (772-886)||(25470829-25470944)
chr8 (308-383)||(13638212-13638287)
chr8 (308-383)||(13738625-13738700)
chr8 (390-429)||(36024103-36024142)
chr8 (462-501)||(38896172-38896211)
[»] chr6 (23 HSPs)
chr6 (291-625)||(32362551-32362885)
chr6 (294-533)||(17720314-17720551)
chr6 (291-471)||(15102214-15102394)
chr6 (291-599)||(29520423-29520732)
chr6 (294-503)||(17252441-17252651)
chr6 (776-895)||(22730688-22730809)
chr6 (765-886)||(9031763-9031886)
chr6 (765-882)||(4844144-4844262)
chr6 (793-886)||(24256913-24257008)
chr6 (793-882)||(32540954-32541045)
chr6 (765-886)||(26669635-26669757)
chr6 (772-884)||(3029965-3030079)
chr6 (839-885)||(30668235-30668281)
chr6 (439-485)||(34117544-34117590)
chr6 (439-492)||(34144553-34144606)
chr6 (439-492)||(34157169-34157222)
chr6 (805-886)||(25064684-25064767)
chr6 (795-882)||(30833018-30833107)
chr6 (295-356)||(8385240-8385301)
chr6 (804-886)||(19135926-19136010)
chr6 (291-340)||(34144709-34144758)
chr6 (291-340)||(34157325-34157374)
chr6 (765-818)||(34571444-34571497)
[»] chr4 (23 HSPs)
chr4 (291-625)||(28732191-28732525)
chr4 (291-516)||(8081569-8081794)
chr4 (393-503)||(56337943-56338053)
chr4 (775-886)||(49039431-49039543)
chr4 (804-886)||(15640457-15640542)
chr4 (776-887)||(34684564-34684674)
chr4 (766-834)||(39293579-39293647)
chr4 (775-884)||(49319392-49319503)
chr4 (765-886)||(54854155-54854277)
chr4 (775-872)||(21023338-21023435)
chr4 (388-429)||(41381553-41381594)
chr4 (825-886)||(9062173-9062236)
chr4 (795-887)||(18740921-18741016)
chr4 (803-860)||(44272959-44273018)
chr4 (291-339)||(56338111-56338159)
chr4 (839-886)||(41492549-41492596)
chr4 (776-852)||(47416499-47416576)
chr4 (397-432)||(53569598-53569633)
chr4 (376-432)||(55261556-55261614)
chr4 (394-432)||(9690008-9690046)
chr4 (839-884)||(4419737-4419782)
chr4 (839-888)||(27921891-27921940)
chr4 (840-885)||(53335306-53335351)
[»] chr7 (18 HSPs)
chr7 (291-625)||(38076705-38077039)
chr7 (294-625)||(14746640-14746971)
chr7 (776-892)||(35498389-35498505)
chr7 (839-888)||(7465461-7465510)
chr7 (328-432)||(27724620-27724724)
chr7 (765-886)||(27726345-27726467)
chr7 (765-886)||(43635585-43635707)
chr7 (765-885)||(32814825-32814946)
chr7 (775-883)||(44409201-44409309)
chr7 (766-869)||(32309125-32309229)
chr7 (842-886)||(32514690-32514734)
chr7 (806-886)||(45267942-45268024)
chr7 (294-332)||(4939025-4939063)
chr7 (854-888)||(14772401-14772435)
chr7 (854-888)||(15222853-15222887)
chr7 (793-872)||(19924778-19924859)
chr7 (765-887)||(11808034-11808158)
chr7 (776-882)||(43712300-43712407)
[»] chr2 (26 HSPs)
chr2 (291-625)||(856085-856419)
chr2 (291-625)||(3704213-3704546)
chr2 (291-625)||(34832885-34833219)
chr2 (291-501)||(39072621-39072831)
chr2 (293-507)||(13352095-13352311)
chr2 (291-384)||(20930989-20931082)
chr2 (765-888)||(39334857-39334981)
chr2 (765-886)||(34107271-34107393)
chr2 (775-872)||(44132548-44132647)
chr2 (772-884)||(1244568-1244681)
chr2 (765-886)||(20942085-20942204)
chr2 (794-887)||(32288372-32288467)
chr2 (765-884)||(38581582-38581701)
chr2 (783-888)||(38807876-38807983)
chr2 (782-885)||(2057479-2057581)
chr2 (397-432)||(31265814-31265849)
chr2 (839-885)||(917342-917388)
chr2 (804-887)||(3179320-3179405)
chr2 (804-886)||(21970453-21970538)
chr2 (1034-1076)||(26545908-26545950)
chr2 (839-885)||(34376540-34376586)
chr2 (395-432)||(6823001-6823038)
chr2 (844-885)||(22014713-22014754)
chr2 (804-885)||(44187701-44187785)
chr2 (776-886)||(44487754-44487865)
chr2 (375-432)||(45126361-45126418)
[»] chr3 (23 HSPs)
chr3 (291-625)||(38356012-38356346)
chr3 (291-625)||(52194930-52195264)
chr3 (292-625)||(55366097-55366430)
chr3 (294-557)||(53272610-53272872)
chr3 (293-612)||(1660393-1660706)
chr3 (294-503)||(36624258-36624469)
chr3 (329-509)||(18380576-18380759)
chr3 (765-881)||(33533205-33533322)
chr3 (795-883)||(31108765-31108855)
chr3 (796-872)||(34407096-34407174)
chr3 (393-432)||(46249373-46249412)
chr3 (839-885)||(28951864-28951910)
chr3 (843-888)||(16985015-16985060)
chr3 (843-884)||(19149423-19149464)
chr3 (291-340)||(21398428-21398477)
chr3 (839-886)||(38555078-38555126)
chr3 (393-432)||(4963949-4963988)
chr3 (839-886)||(6951841-6951888)
chr3 (765-884)||(24160504-24160624)
chr3 (793-872)||(51017801-51017881)
chr3 (847-884)||(6284876-6284913)
chr3 (439-492)||(10349662-10349715)
chr3 (766-888)||(49299217-49299339)
[»] chr5 (14 HSPs)
chr5 (11-269)||(24653388-24653654)
chr5 (630-1115)||(24652904-24653402)
chr5 (27-269)||(24651388-24651626)
chr5 (133-233)||(29418556-29418655)
chr5 (630-756)||(24651274-24651402)
chr5 (1114-1177)||(24652116-24652179)
chr5 (293-585)||(29488616-29488907)
chr5 (775-886)||(3535922-3536034)
chr5 (766-811)||(41181816-41181861)
chr5 (804-888)||(6447494-6447581)
chr5 (765-868)||(8934797-8934900)
chr5 (839-886)||(5932069-5932116)
chr5 (774-833)||(6291047-6291105)
chr5 (775-886)||(40250163-40250275)
[»] chr1 (24 HSPs)
chr1 (291-468)||(26701186-26701364)
chr1 (776-886)||(41998095-41998205)
chr1 (772-886)||(18179325-18179440)
chr1 (765-886)||(9931084-9931206)
chr1 (776-892)||(37262093-37262209)
chr1 (772-886)||(2643798-2643913)
chr1 (776-882)||(9769567-9769674)
chr1 (765-886)||(9410304-9410425)
chr1 (795-883)||(43020611-43020701)
chr1 (795-886)||(9768814-9768907)
chr1 (765-883)||(13941319-13941438)
chr1 (396-432)||(22565648-22565684)
chr1 (776-872)||(195055-195152)
chr1 (776-872)||(5684133-5684230)
chr1 (825-883)||(8758404-8758463)
chr1 (397-500)||(13868263-13868366)
chr1 (774-886)||(42908768-42908881)
chr1 (775-886)||(7906312-7906424)
chr1 (302-348)||(17823621-17823667)
chr1 (840-882)||(28417330-28417372)
chr1 (775-886)||(41677057-41677169)
chr1 (839-885)||(46670895-46670941)
chr1 (840-886)||(51917554-51917600)
chr1 (295-356)||(10122377-10122438)
[»] scaffold0057 (1 HSPs)
scaffold0057 (393-501)||(3380-3488)
[»] scaffold0119 (1 HSPs)
scaffold0119 (765-886)||(1036-1158)
[»] scaffold0045 (1 HSPs)
scaffold0045 (776-871)||(30885-30983)


Alignment Details
Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 291 - 625
Target Start/End: Complemental strand, 29722550 - 29722216
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataag 390  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29722550 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactaaagaggtcaccccaaagaacaaacagtcactacataattacaaaaataag 29722451  T
Q  391 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatac 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  29722450 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctactcgtgccataaacaaagttggcattgttagctttcagccaccacaaagaattatac 29722351  T
Q  491 ttaaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagca 590  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||    
T  29722350 ttaaccttttctacaagatctatcatagtaagttgtgtattattgaaaattatattatttctttcgtgccaaacaatccatacacacaagagccaaaaca 29722251  T
Q  591 tttgcatgattgtccggcgcttcgtcgacccacca 625  Q
    |||||||||||||||||||||||||||||||||||    
T  29722250 tttgcatgattgtccggcgcttcgtcgacccacca 29722216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 413 - 501
Target Start/End: Original strand, 13638290 - 13638378
Alignment:
Q  413 aacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatacttaaccttttc 501  Q
    ||||||||||||||||||||| | |||||||||||||| ||||||||||| | ||||| |||||| || |||| || ||| ||||||||    
T  13638290 aacgggtccgaccaccatctaatcgtgccataaacaaacttggcattgttcgttttcagccaccaaaaggaattatgcttgaccttttc 13638378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 413 - 501
Target Start/End: Original strand, 13738703 - 13738791
Alignment:
Q  413 aacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatacttaaccttttc 501  Q
    ||||||||||||||||||||| | |||||||||||||| ||||||||||| | ||||| |||||| || |||| || ||| ||||||||    
T  13738703 aacgggtccgaccaccatctaatcgtgccataaacaaacttggcattgttcgttttcagccaccaaaaggaattatgcttgaccttttc 13738791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 794 - 886
Target Start/End: Original strand, 39432332 - 39432426
Alignment:
Q  794 ttttttcaatgtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataaggcatgtctctgccaactgaattatgctcacggg 886  Q
    ||||||||| ||||||||| ||||| |||||||||||||| ||||  ||||||||||| |  ||||||| |||||||||||  ||||||||||||    
T  39432332 ttttttcaaagtgaataagtggggtgtctgaggttcgaaccccaacccctgcatataacattgcatgtccctgccaactgagctatgctcacggg 39432426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 42240448 - 42240320
Alignment:
Q  388 aagttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatga 487  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||    | | |||||||||| |  |||| ||||||| ||| | |||| ||||||| |    
T  42240448 aagtcagtcgatactcaaacaaagtaacgggtccaaccaccatctttgagagtcataaacaaaatatgcatggttagctatcagcaaccaaaaagaatta 42240349  T
Q  488 tacttaaccttttctacaagatctatcat 516  Q
    || |||||||| ||||  |||||||||||    
T  42240348 tatttaaccttgtctagtagatctatcat 42240320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 765 - 888
Target Start/End: Original strand, 220338 - 220462
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaac--ctgcatataataaggcatgtctc 862  Q
    |||||| ||||||||||||||||||| || |||||||| ||||||||| ||||| || | | ||||||| |  ||  |||||||||| |  ||||||| |    
T  220338 gtcaagtagtctagtggttagaattcacc-tttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccc 220436  T
Q  863 tgccaactgaattatgctcacgggaa 888  Q
    ||||||||||  ||||||||||||||    
T  220437 tgccaactgagctatgctcacgggaa 220462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 765 - 888
Target Start/End: Original strand, 689493 - 689617
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaac--ctgcatataataaggcatgtctc 862  Q
    |||||| ||||||||||||||||||| || |||||||| ||||||||| ||||| || | | ||||||| |  ||  |||||||||| |  ||||||| |    
T  689493 gtcaagtagtctagtggttagaattcacc-tttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccc 689591  T
Q  863 tgccaactgaattatgctcacgggaa 888  Q
    ||||||||||  ||||||||||||||    
T  689592 tgccaactgagctatgctcacgggaa 689617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 765 - 888
Target Start/End: Original strand, 733961 - 734085
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaac--ctgcatataataaggcatgtctc 862  Q
    |||||| ||||||||||||||||||| || |||||||| ||||||||| ||||| || | | ||||||| |  ||  |||||||||| |  ||||||| |    
T  733961 gtcaagtagtctagtggttagaattcacc-tttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccc 734059  T
Q  863 tgccaactgaattatgctcacgggaa 888  Q
    ||||||||||  ||||||||||||||    
T  734060 tgccaactgagctatgctcacgggaa 734085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 765 - 888
Target Start/End: Original strand, 857857 - 857981
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaac--ctgcatataataaggcatgtctc 862  Q
    |||||| ||||||||||||||||||| || |||||||| ||||||||| ||||| || | | ||||||| |  ||  |||||||||| |  ||||||| |    
T  857857 gtcaagtagtctagtggttagaattcacc-tttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccc 857955  T
Q  863 tgccaactgaattatgctcacgggaa 888  Q
    ||||||||||  ||||||||||||||    
T  857956 tgccaactgagctatgctcacgggaa 857981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 839 - 888
Target Start/End: Complemental strand, 7345472 - 7345423
Alignment:
Q  839 cctgcatataataaggcatgtctctgccaactgaattatgctcacgggaa 888  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  7345472 cctgcatataataatgcatgtccctgccaactgagttatgctcacgggaa 7345423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 765 - 888
Target Start/End: Original strand, 16808335 - 16808461
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaa---cctgcatataataaggcatgtct 861  Q
    |||||| || |||||||||||||||| | |||||| || ||||||||| ||| | | || ||||||||| ||     |||||||||||||| |||||||     
T  16808335 gtcaagcagcctagtggttagaattcacttttttttaaggtgaataagtgggctgtatggggttcgaaccccccacccctgcatataataatgcatgtcc 16808434  T
Q  862 ctgccaactgaattatgctcacgggaa 888  Q
    |||| |||||| ||||||||| |||||    
T  16808435 ctgctaactgagttatgctcatgggaa 16808461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 775 - 883
Target Start/End: Original strand, 14011024 - 14011133
Alignment:
Q  775 ctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactga 872  Q
    |||||||||||||||| | |||||| ||  |||||||| ||| | || ||||||||||||||  ||  ||||||||| || ||||||| |||||||||||    
T  14011024 ctagtggttagaattcacatttttt-aagatgaataagtgggatgtccgaggttcgaactccggcccctgcatataacaatgcatgtccctgccaactga 14011122  T
Q  873 attatgctcac 883  Q
    | |||||||||    
T  14011123 actatgctcac 14011133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 772 - 886
Target Start/End: Original strand, 25470829 - 25470944
Alignment:
Q  772 agtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaac 869  Q
    |||||||||| |||||||| |||| || ||| ||||||||  ||||| || ||||||||||| || |||  || ||||||||| ||||||  ||| ||||    
T  25470829 agtctagtggctagaattcaccttctt-caaggtgaataaatggggtgtccgaggttcgaaccccgacccatgaatataataatgcatgttcctgtcaac 25470927  T
Q  870 tgaattatgctcacggg 886  Q
    ||| |||||||||||||    
T  25470928 tgagttatgctcacggg 25470944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 383
Target Start/End: Original strand, 13638212 - 13638287
Alignment:
Q  308 ggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaa 383  Q
    |||||||  |||||| ||||||||| ||||||| ||| | |||||||||||| |||||||||  | ||||||||||    
T  13638212 ggcgatggtttctctttagcacaagatgtactaaagaagccaccccaaagaacaaacagtcataatataattacaa 13638287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 383
Target Start/End: Original strand, 13738625 - 13738700
Alignment:
Q  308 ggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaa 383  Q
    |||||||  |||||| ||||||||| ||||||| ||| | |||||||||||| |||||||||  | ||||||||||    
T  13738625 ggcgatggtttctctttagcacaagatgtactaaagaagccaccccaaagaacaaacagtcataatataattacaa 13738700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 390 - 429
Target Start/End: Original strand, 36024103 - 36024142
Alignment:
Q  390 gttagtcgatacccaaacaaagtaacgggtccgaccacca 429  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  36024103 gttagtcaatacccaaacaaagtaacgggtctgaccacca 36024142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 462 - 501
Target Start/End: Complemental strand, 38896211 - 38896172
Alignment:
Q  462 tagctttcatccaccacaaagaatgatacttaaccttttc 501  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  38896211 tagctttcatccaccacaaagaatgatactttactttttc 38896172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 291; Significance: 1e-163; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 291 - 625
Target Start/End: Original strand, 32362551 - 32362885
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataag 390  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  32362551 tggaatatattaacaacggcgatgaattctctatagcacaagatgtactaaagaggtcatcccaaagaacaaacagtcactacataattacaaaaataag 32362650  T
Q  391 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatac 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  32362651 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctactcgtgccataaacaaagttggcattgttagctttcaaccaccacaatgaattatac 32362750  T
Q  491 ttaaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagca 590  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32362751 ttaaccttttctacaagatctatcataacaagttgtgtattattgaaaattctattatttctttcgtgccaaacaatccatacacacaagagccaaagca 32362850  T
Q  591 tttgcatgattgtccggcgcttcgtcgacccacca 625  Q
    |||||||||||||||||||||||||||||||||||    
T  32362851 tttgcatgattgtccggcgcttcgtcgacccacca 32362885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 294 - 533
Target Start/End: Original strand, 17720314 - 17720551
Alignment:
Q  294 aatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataagtta 393  Q
    |||||||||||||||||| |||| |||| ||||||||||||||||||  ||||||||||||||||| |||||||||||||  ||||||||||| |  |||    
T  17720314 aatatattaacaacggcggtgaactctcgatagcacaaggtgtactaatgaggtcaccccaaagaacaaacagtcactactaaattacaaaaaaa--tta 17720411  T
Q  394 gtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatactta 493  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17720412 gtcgatacccaaacaaattaacgggtccgaccaccatctactcgtgccataaacaaagttggcatggttagctttcatccaccacaaagaatgatactta 17720511  T
Q  494 accttttctacaagatctatcatagtaagttgtgtattat 533  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  17720512 accttttctacaagatctatcatagtaaggtgagtattat 17720551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 291 - 471
Target Start/End: Complemental strand, 15102394 - 15102214
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataag 390  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| ||||| |||||||| || || |||||  ||||||||||||| ||     
T  15102394 tggaatatattaacaacggcggtgaattctctgtagcacaaggtgtactaaagaagtcactccaaagaacaagcattcactgaataattacaaaaacaaa 15102295  T
Q  391 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcat 471  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  15102294 ttagtcgatacccaaataaagtaacgggtccgaccaccatctactcgtgccataaataaagttggcattgttagctttcat 15102214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 291 - 599
Target Start/End: Original strand, 29520423 - 29520732
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaa-aataa 389  Q
    ||||||||||||||| || |||||  | ||||| |||||||||||||||| ||||| ||||||||| || ||| | |||||  |||||||||||  | |     
T  29520423 tggaatatattaacaccgacgatggttcctctaaagcacaaggtgtactaaagaggccaccccaaaaaacaaagaatcactgtataattacaaagcaaag 29520522  T
Q  390 gttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgata 489  Q
    || ||||||||||  ||||||||||| | | |||||||||||||    || |||||||||| ||||||||||| ||||||| |||||| || || | |||    
T  29520523 gtcagtcgataccacaacaaagtaacagattcgaccaccatctatgattgtcataaacaaaattggcattgtttgctttcagccaccaaaatgagttata 29520622  T
Q  490 cttaaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagc 589  Q
     ||||||||||||| ||| |||||||| |||  |||  |||| ||||| ||| | || |||| ||| |  ||||| ||||  |||||||||||||||||     
T  29520623 tttaaccttttctaaaagttctatcatggtagtttgaatattcttgaatattttgttgtttcgttcattccaaactatccgcacacacaagagccaaaga 29520722  T
Q  590 atttgcatga 599  Q
    | ||||||||    
T  29520723 agttgcatga 29520732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 294 - 503
Target Start/End: Complemental strand, 17252651 - 17252441
Alignment:
Q  294 aatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcacccc-aaagaataaacagtcactacataattacaaaa-ataagt 391  Q
    ||||||||||||  ||||||| ||||| |  || ||||||||||||  |||| ||||||| ||| || |||||| ||||  |||||||||||| | | ||    
T  17252651 aatatattaacactggcgatggattcttttcagtacaaggtgtactcaagagatcaccccgaaacaacaaacaggcactgtataattacaaaagagaggt 17252552  T
Q  392 tagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatact 491  Q
     ||||||||||||||||||||||| |||||||||||||  || |  || ||||||||||||||||||||| |||||| | |||||| | ||| || || |    
T  17252551 cagtcgatacccaaacaaagtaacaggtccgaccaccagtta-tgatgtcataaacaaagttggcattgtgagctttaagccaccaaagagattggtatt 17252453  T
Q  492 taaccttttcta 503  Q
    ||||||||||||    
T  17252452 taaccttttcta 17252441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 776 - 895
Target Start/End: Original strand, 22730688 - 22730809
Alignment:
Q  776 tagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataaggcatgtctctgccaactgaa 873  Q
    |||||| |||||||| |||| ||| || ||||||||| ||||| || |||||||||||| ||   ||||||||||| || |||||||||||||||||||     
T  22730688 tagtggctagaattcaccttattttaaggtgaataagtggggtgtccgaggttcgaacttcagtccctgcatataacaatgcatgtctctgccaactgag 22730787  T
Q  874 ttatgctcacgggaaaaaacaa 895  Q
    ||||||||||||| | ||||||    
T  22730788 ttatgctcacggggacaaacaa 22730809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 765 - 886
Target Start/End: Complemental strand, 9031886 - 9031763
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataaggcatgtctc 862  Q
    |||||| ||||||||||||||||||| ||||||||  |  |||||||| ||||| |||||||||| |||| |||  ||||||||||| || ||||||| |    
T  9031886 gtcaagtagtctagtggttagaattcaccttttttttaaatgaataagtggggtgtctgaggttcaaacttcaagccctgcatataacaatgcatgtccc 9031787  T
Q  863 tgccaactgaattatgctcacggg 886  Q
    ||||||||||  |||| |||||||    
T  9031786 tgccaactgagctatgttcacggg 9031763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 765 - 882
Target Start/End: Complemental strand, 4844262 - 4844144
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctc 862  Q
    |||||| ||||||||||||||||||| | ||||||||| ||||||||| | ||| |||||||||  ||| || |||  ||||||||| || ||||||| |    
T  4844262 gtcaagtagtctagtggttagaattcac-ttttttcaaggtgaataagtgaggtgtctgaggtttaaaccccgacccctgcatataacaatgcatgtccc 4844164  T
Q  863 tgccaactgaattatgctca 882  Q
    |||||||||| |||| ||||    
T  4844163 tgccaactgagttatactca 4844144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 793 - 886
Target Start/End: Complemental strand, 24257008 - 24256913
Alignment:
Q  793 cttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactgaattatgctcacggg 886  Q
    |||||||||| ||||||||| |||||||| | |||||||||  |  ||  |||||||||||| |||||||||| |||||||| |||||||||||||    
T  24257008 cttttttcaaggtgaataagtggggtatccggggttcgaacctcggcccctgcatataataatgcatgtctctaccaactgacttatgctcacggg 24256913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 793 - 882
Target Start/End: Original strand, 32540954 - 32541045
Alignment:
Q  793 cttttttcaatgtgaataagcggggtatctgaggttcgaactccaacctgcatata--ataaggcatgtctctgccaactgaattatgctca 882  Q
    ||||||| || ||||||||| ||||||||||  ||||||||||| ||||  |||||  |||| |||||||||||||||||||| ||||||||    
T  32540954 ctttttttaaggtgaataagtggggtatctggagttcgaactccgacctctatatataataatgcatgtctctgccaactgaactatgctca 32541045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 765 - 886
Target Start/End: Original strand, 26669635 - 26669757
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctc 862  Q
    |||||| ||| |||||| |||||||| ||||||| ||| ||||||||| ||||| |||| ||||||||| ||| ||  | |||||||| | ||||||| |    
T  26669635 gtcaagtagtttagtggctagaattcaccttttt-caaggtgaataagtggggtgtctggggttcgaaccccagcccctacatataattatgcatgtccc 26669733  T
Q  863 tgccaactgaattatgctcacggg 886  Q
    | ||||||||  ||||||||||||    
T  26669734 taccaactgagctatgctcacggg 26669757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 772 - 884
Target Start/End: Complemental strand, 3030079 - 3029965
Alignment:
Q  772 agtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaac--ctgcatataataaggcatgtctctgccaac 869  Q
    |||| |||||||||||||| | |||||| || ||||||||| ||||| ||   |||||||||||||||  || ||||||||||   ||||| ||||||||    
T  3030079 agtccagtggttagaattcacatttttttaaggtgaataagtggggtgtccagggttcgaactccaaccactacatataataatttatgtccctgccaac 3029980  T
Q  870 tgaattatgctcacg 884  Q
    | | |||||||||||    
T  3029979 taagttatgctcacg 3029965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 839 - 885
Target Start/End: Original strand, 30668235 - 30668281
Alignment:
Q  839 cctgcatataataaggcatgtctctgccaactgaattatgctcacgg 885  Q
    |||||||||||||| |||||||| |||||||||| ||||||||||||    
T  30668235 cctgcatataataatgcatgtctatgccaactgagttatgctcacgg 30668281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 439 - 485
Target Start/End: Complemental strand, 34117590 - 34117544
Alignment:
Q  439 gccataaacaaagttggcattgttagctttcatccaccacaaagaat 485  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||    
T  34117590 gccataaacaaagttggcattgttggctttcagccaccaaaaagaat 34117544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 439 - 492
Target Start/End: Complemental strand, 34144606 - 34144553
Alignment:
Q  439 gccataaacaaagttggcattgttagctttcatccaccacaaagaatgatactt 492  Q
    |||||||||||||||||||||||| ||||||| | |||| ||||||| ||||||    
T  34144606 gccataaacaaagttggcattgttggctttcagctaccaaaaagaattatactt 34144553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 439 - 492
Target Start/End: Complemental strand, 34157222 - 34157169
Alignment:
Q  439 gccataaacaaagttggcattgttagctttcatccaccacaaagaatgatactt 492  Q
    |||||||||||||||||||||||| ||||||| | |||| ||||||| ||||||    
T  34157222 gccataaacaaagttggcattgttggctttcagctaccaaaaagaattatactt 34157169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 805 - 886
Target Start/End: Original strand, 25064684 - 25064767
Alignment:
Q  805 tgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactgaattatgctcacggg 886  Q
    |||| ||| ||||| |||| ||||||||| ||||||  |||||||||||| |||||||  | ||||||||| ||||||||||||    
T  25064684 tgaagaagtggggtgtctggggttcgaaccccaacccctgcatataataatgcatgtccataccaactgaactatgctcacggg 25064767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 795 - 882
Target Start/End: Complemental strand, 30833107 - 30833018
Alignment:
Q  795 tttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactgaattatgctca 882  Q
    |||||||| | ||||||| ||||| || | ||||||||| || |||  ||||||||| || ||||||| |||||||||||| ||||||||    
T  30833107 tttttcaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgaactatgctca 30833018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 295 - 356
Target Start/End: Complemental strand, 8385301 - 8385240
Alignment:
Q  295 atatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaa 356  Q
    ||||||||||||||||| ||||| | |   |||||||||||||||  |||||||||||||||    
T  8385301 atatattaacaacggcggtgaatccccataagcacaaggtgtactcaagaggtcaccccaaa 8385240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 804 - 886
Target Start/End: Complemental strand, 19136010 - 19135926
Alignment:
Q  804 gtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactgaattatgctcacggg 886  Q
    ||||||||| | ||| | ||||||||||||  |||||  |||||||||||| ||||||| |||||||| ||  ||||||||||||    
T  19136010 gtgaataagtgtggtgtatgaggttcgaacgtcaacccatgcatataataatgcatgtccctgccaaccgagctatgctcacggg 19135926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 291 - 340
Target Start/End: Complemental strand, 34144758 - 34144709
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtacta 340  Q
    ||||||||||||||||||| | | ||||||||  ||||||||||||||||    
T  34144758 tggaatatattaacaacggtggtaaattctcttcagcacaaggtgtacta 34144709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 291 - 340
Target Start/End: Complemental strand, 34157374 - 34157325
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtacta 340  Q
    ||||||||||||||||||| | | ||||||||  ||||||||||||||||    
T  34157374 tggaatatattaacaacggtggtaaattctcttcagcacaaggtgtacta 34157325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 765 - 818
Target Start/End: Complemental strand, 34571497 - 34571444
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggt 818  Q
    |||||| || |||||||||||||||| ||||||||||| | ||||||| |||||    
T  34571497 gtcaagtagactagtggttagaattccccttttttcaaagcgaataagtggggt 34571444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 279; Significance: 1e-155; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 279; E-Value: 1e-155
Query Start/End: Original strand, 291 - 625
Target Start/End: Complemental strand, 28732525 - 28732191
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataag 390  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||| |||    
T  28732525 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactaaagaggtcaccccaaagaccaaacagtcactacataattacaaaaacaag 28732426  T
Q  391 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatac 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  28732425 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctactcgtgccataaacaaagttggcattgttagctttcagccaccacaatgaattatac 28732326  T
Q  491 ttaaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagca 590  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  28732325 ttaaccttttctacaagatctatcatagtaagttgggtattattgaaaattctattatttctttcgtgctaaacaatccatacacacaagagccaaagca 28732226  T
Q  591 tttgcatgattgtccggcgcttcgtcgacccacca 625  Q
    ||||||| ||||| |||||||| ||||||||||||    
T  28732225 tttgcataattgttcggcgctttgtcgacccacca 28732191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 291 - 516
Target Start/End: Original strand, 8081569 - 8081794
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataag 390  Q
    ||||||||| ||||| ||||||||  | ||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||  |||||||||||   |||    
T  8081569 tggaatatactaacaccggcgatggttcctctaaagcacaaggtgtactaaagaagtcaccccaaa-aataaacagtcactgtataattacaaagcaaag 8081667  T
Q  391 -ttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgata 489  Q
     || |||||||| |||||||||||| ||||||||||||||||||   |||||||||||||| ||| ||||||||||||||| |||||| ||| | | |||    
T  8081668 gtttgtcgatactcaaacaaagtaatgggtccgaccaccatctatgagtgccataaacaaaattgacattgttagctttcagccaccaaaaaaagttata 8081767  T
Q  490 cttaaccttttctacaagatctatcat 516  Q
     ||||||||||||| ||| ||||||||    
T  8081768 tttaaccttttctaaaagttctatcat 8081794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 393 - 503
Target Start/End: Complemental strand, 56338053 - 56337943
Alignment:
Q  393 agtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatactt 492  Q
    ||||||||||||||||||| ||| ||||| ||||||||||    |  |||||||||||  |||||||||||||||| | |||||||||||||  ||| ||    
T  56338053 agtcgatacccaaacaaagcaaccggtccaaccaccatctttgagaaccataaacaaaagtggcattgttagcttttagccaccacaaagaagtatattt 56337954  T
Q  493 aaccttttcta 503  Q
    |||||| ||||    
T  56337953 aaccttatcta 56337943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 775 - 886
Target Start/End: Original strand, 49039431 - 49039543
Alignment:
Q  775 ctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataaggcatgtctctgccaactga 872  Q
    ||||||| |||||||| ||||||| ||| ||||||||| ||||| || | ||||||||| |||   ||||||||||| || ||||||| |||||||||||    
T  49039431 ctagtggctagaattcaccttttt-caaggtgaataagtggggtgtccggggttcgaaccccagtccctgcatataacaatgcatgtccctgccaactga 49039529  T
Q  873 attatgctcacggg 886  Q
      ||||||||||||    
T  49039530 gctatgctcacggg 49039543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 804 - 886
Target Start/End: Original strand, 15640457 - 15640542
Alignment:
Q  804 gtgaataagcggggtatctgaggttcgaactcc-aac-ctgcatataataaggca-tgtctctgccaactgaattatgctcacggg 886  Q
    ||||||||| ||||| |||||||||||||| || ||| ||||||||||||| ||| ||||||||||||||||  ||||||||||||    
T  15640457 gtgaataagtggggtgtctgaggttcgaaccccgaacactgcatataataatgcattgtctctgccaactgagatatgctcacggg 15640542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 776 - 887
Target Start/End: Complemental strand, 34684674 - 34684564
Alignment:
Q  776 tagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaac--ctgcatataataaggcatgtctctgccaactgaa 873  Q
    ||||||||||||||| |||| |   || ||||||||| ||||| ||||||||||||| ||||||  ||||||||||||| | ||  | || |||| ||||    
T  34684674 tagtggttagaattcaccttat---aaggtgaataagtggggtgtctgaggttcgaattccaacctctgcatataataatgtattcccctaccaattgaa 34684578  T
Q  874 ttatgctcacggga 887  Q
    ||||||||||||||    
T  34684577 ttatgctcacggga 34684564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 766 - 834
Target Start/End: Complemental strand, 39293647 - 39293579
Alignment:
Q  766 tcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaact 834  Q
    ||||| |||||||| | |||||||| ||||||||||| ||||||||| ||| | |||||||||||||||    
T  39293647 tcaagtagtctagtagctagaattcaccttttttcaaggtgaataagtgggatgtctgaggttcgaact 39293579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 775 - 884
Target Start/End: Complemental strand, 49319503 - 49319392
Alignment:
Q  775 ctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactga 872  Q
    ||||||| || ||||| ||||||||||| ||||||||| ||||| || | |||| |||| || |||  |||||||||||| |||||||  ||||||||||    
T  49319503 ctagtggctataattcaccttttttcaaggtgaataagtggggtgtccggggttggaaccccgacccctgcatataataatgcatgtccatgccaactga 49319404  T
Q  873 attatgctcacg 884  Q
      ||||||||||    
T  49319403 gctatgctcacg 49319392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 765 - 886
Target Start/End: Original strand, 54854155 - 54854277
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctc 862  Q
    |||||| |||||||||| |||||||| | ||||||||| ||||||||| | | | || | ||||||||| ||| ||  |||||||||| | ||||||| |    
T  54854155 gtcaagtagtctagtggctagaattcac-ttttttcaaggtgaataagtgtgatgtccggggttcgaaccccagcccctgcatataattatgcatgtccc 54854253  T
Q  863 tgccaactgaattatgctcacggg 886  Q
    ||||||||||  ||||||||||||    
T  54854254 tgccaactgagctatgctcacggg 54854277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 775 - 872
Target Start/End: Original strand, 21023338 - 21023435
Alignment:
Q  775 ctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaa-cctgcatataataaggcatgtctctgccaactga 872  Q
    |||||||||||||||| || |||||||| ||||||||| ||||| || | ||||||||| |||| || | |||||| || |||||| ||||||||||||    
T  21023338 ctagtggttagaattcacc-tttttcaaggtgaataagtggggtgtcgggggttcgaaccccaaccccggatataacaatgcatgtttctgccaactga 21023435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 429
Target Start/End: Original strand, 41381553 - 41381594
Alignment:
Q  388 aagttagtcgatacccaaacaaagtaacgggtccgaccacca 429  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  41381553 aagttagtcaatacccaaacaaagtaacgggtctgaccacca 41381594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 825 - 886
Target Start/End: Complemental strand, 9062236 - 9062173
Alignment:
Q  825 ggttcgaactccaacc--tgcatataataaggcatgtctctgccaactgaattatgctcacggg 886  Q
    ||||||||| ||||||  |||||||||||| ||||||| ||||||||| || ||||||||||||    
T  9062236 ggttcgaaccccaacccttgcatataataatgcatgtccctgccaactaaactatgctcacggg 9062173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 795 - 887
Target Start/End: Original strand, 18740921 - 18741016
Alignment:
Q  795 tttttcaatgtgaataagcgggg-tatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactgaattatgctcacggga 887  Q
    |||||||| ||||||||| |||| | | || |||||||||||| |||  |||||||||||| |||| |||||||||||||| || |||| ||||||    
T  18740921 tttttcaaggtgaataagtgggggtgtttggggttcgaactccgacccctgcatataataatgcatatctctgccaactgagttgtgcttacggga 18741016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 803 - 860
Target Start/End: Complemental strand, 44273018 - 44272959
Alignment:
Q  803 tgtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataaggcatgtc 860  Q
    |||||||||| |||||||| |||||||||||||| |  |||||||||||||| |||||||    
T  44273018 tgtgaataagtggggtatccgaggttcgaactccgacccctgcatataataatgcatgtc 44272959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 56338159 - 56338111
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtact 339  Q
    ||||||||||||||||||||  ||||| |||| ||||||||||||||||    
T  56338159 tggaatatattaacaacggcagtgaatcctctttagcacaaggtgtact 56338111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 839 - 886
Target Start/End: Original strand, 41492549 - 41492596
Alignment:
Q  839 cctgcatataataaggcatgtctctgccaactgaattatgctcacggg 886  Q
    |||||||||||||| ||||||| |||||||||||  ||||||||||||    
T  41492549 cctgcatataataatgcatgtccctgccaactgagctatgctcacggg 41492596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 776 - 852
Target Start/End: Complemental strand, 47416576 - 47416499
Alignment:
Q  776 tagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataa 852  Q
    ||||||||||||||| || |||||||| ||||||||| ||||| || ||| ||||||| ||||  ||||||||||||||    
T  47416576 tagtggttagaattcacc-tttttcaaagtgaataagtggggtgtccgagattcgaaccccaacccctgcatataataa 47416499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 397 - 432
Target Start/End: Original strand, 53569598 - 53569633
Alignment:
Q  397 gatacccaaacaaagtaacgggtccgaccaccatct 432  Q
    |||||||||||||||||| |||||||||||||||||    
T  53569598 gatacccaaacaaagtaaagggtccgaccaccatct 53569633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 55261556 - 55261614
Alignment:
Q  376 aattacaaaaataa--gttagtcgatacccaaacaaagtaacgggtccgaccaccatct 432  Q
    ||||||||||||||  || ||||||||||||  ||||||||||||||| ||||||||||    
T  55261556 aattacaaaaataaaggtcagtcgatacccagtcaaagtaacgggtccaaccaccatct 55261614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 394 - 432
Target Start/End: Original strand, 9690008 - 9690046
Alignment:
Q  394 gtcgatacccaaacaaagtaacgggtccgaccaccatct 432  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  9690008 gtcgatacccaaacaaagtaaagggttcgaccaccatct 9690046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 839 - 884
Target Start/End: Original strand, 4419737 - 4419782
Alignment:
Q  839 cctgcatataataaggcatgtctctgccaactgaattatgctcacg 884  Q
    ||||||||||| || ||||||||||| ||||||| |||||||||||    
T  4419737 cctgcatataacaatgcatgtctctgacaactgagttatgctcacg 4419782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 839 - 888
Target Start/End: Complemental strand, 27921940 - 27921891
Alignment:
Q  839 cctgcatataataaggcatgtctctgccaactgaattatgctcacgggaa 888  Q
    |||||||||||||| ||||||| || ||||||||  ||||||||||||||    
T  27921940 cctgcatataataatgcatgtccctaccaactgagctatgctcacgggaa 27921891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 840 - 885
Target Start/End: Complemental strand, 53335351 - 53335306
Alignment:
Q  840 ctgcatataataaggcatgtctctgccaactgaattatgctcacgg 885  Q
    ||||||||||  | ||||||| ||||||||||||||||||||||||    
T  53335351 ctgcatataacgatgcatgtcgctgccaactgaattatgctcacgg 53335306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 275; Significance: 1e-153; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 291 - 625
Target Start/End: Complemental strand, 38077039 - 38076705
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataag 390  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  38077039 tggaatatattaacaacggcgatgaattctctatagcacaagatgtactaaagaggtcatcccaaagaacaaacagtcactacataattacaaaaataag 38076940  T
Q  391 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatac 490  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  38076939 ttagtagatacccaaacaaagtaacggatccgaccaccatctactcgtgccataaacaaagttggcattgttagctttcagccaccacaatgaattatac 38076840  T
Q  491 ttaaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagca 590  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  38076839 ttcaccttttctacaagatctatcatagcaagttgtgtattattgaaaattctattatttctttcgtgccaaacaatccatacacacaagagccaaaaca 38076740  T
Q  591 tttgcatgattgtccggcgcttcgtcgacccacca 625  Q
    |||||||||||||||| ||||||||||||||||||    
T  38076739 tttgcatgattgtccgacgcttcgtcgacccacca 38076705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 294 - 625
Target Start/End: Original strand, 14746640 - 14746971
Alignment:
Q  294 aatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataagtta 393  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  14746640 aatatattaacaacgacgatgaactctcaatagcacaaggtgtactaaagaggtcaccccaaagaacaaacagtcactacaaaattacaaaaataagtta 14746739  T
Q  394 gtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatactta 493  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14746740 gtcgatacccaaacaaagtaacgggtccgaccaccatctactcgtgccataaacaaagttggcattgttagctttcagccaccacaaagaatgatactta 14746839  T
Q  494 accttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagcattt 593  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  14746840 accttttctacaagatctatcatagtaagctcagtattattgaaaattctattatttctttcgtggcaaacaacccatacacacaagagccaaagcattt 14746939  T
Q  594 gcatgattgtccggcgcttcgtcgacccacca 625  Q
    ||||||||||||| |||||| | |||||||||    
T  14746940 gcatgattgtccgccgcttcattgacccacca 14746971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 776 - 892
Target Start/End: Complemental strand, 35498505 - 35498389
Alignment:
Q  776 tagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactgaa 873  Q
    |||||| |||||||| ||||||| ||| ||||||||| ||||| || || ||| |||| ||||||  |||||||||||| ||||||| |||||||||||     
T  35498505 tagtggctagaattcaccttttt-caaagtgaataagtggggtgtccgaagtttgaac-ccaacccctgcatataataatgcatgtccctgccaactgag 35498408  T
Q  874 ttatgctcacgggaaaaaa 892  Q
    ||||||| |||||| ||||    
T  35498407 ttatgcttacgggacaaaa 35498389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 839 - 888
Target Start/End: Complemental strand, 7465510 - 7465461
Alignment:
Q  839 cctgcatataataaggcatgtctctgccaactgaattatgctcacgggaa 888  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  7465510 cctgcatataataatgcatgtctctgccaactgagctatgctcacgggaa 7465461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 432
Target Start/End: Complemental strand, 27724724 - 27724620
Alignment:
Q  328 acaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataagttagtcgatacccaaacaaagtaacgggtccgaccac 427  Q
    ||||| |||||||||||| ||||||| || || |||   | || |||||| ||||  || |||| |||||||||||||||||||||| || |||||||||    
T  27724724 acaagatgtactagagagttcaccccgaaaaagaaatgtttacaacataagtacagtaaaaagtcagtcgatacccaaacaaagtaaaggatccgaccac 27724625  T
Q  428 catct 432  Q
    |||||    
T  27724624 catct 27724620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 765 - 886
Target Start/End: Original strand, 27726345 - 27726467
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaac--ctgcatataataaggcatgtctc 862  Q
    |||||| ||||||||||||||||||| || |||| ||| | |||||||| |||| || ||||||||||| ||  |  |||| |||||||| ||||||| |    
T  27726345 gtcaagtagtctagtggttagaattcacc-ttttccaaagcgaataagcagggtgtccgaggttcgaaccccggccactgcttataataatgcatgtccc 27726443  T
Q  863 tgccaactgaattatgctcacggg 886  Q
    ||||||||||  |||| |||||||    
T  27726444 tgccaactgagctatgttcacggg 27726467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 765 - 886
Target Start/End: Complemental strand, 43635707 - 43635585
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctc 862  Q
    |||||| ||| |||||| |||||||| || ||| | || ||||||||| ||||| || | ||||||||| || |||  ||||||||| || |||||| ||    
T  43635707 gtcaagtagtttagtggctagaattcaccctttgt-aaggtgaataagtggggtgtccggggttcgaaccccgaccgctgcatataacaatgcatgtttc 43635609  T
Q  863 tgccaactgaattatgctcacggg 886  Q
    |||||||||| |||||||||||||    
T  43635608 tgccaactgagttatgctcacggg 43635585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 765 - 885
Target Start/End: Complemental strand, 32814946 - 32814825
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctc 862  Q
    |||||| |||| |||||||| ||||| |||||||| | | |||||||| ||||| || | | |||||||||| |||  |||||||||||| ||||||| |    
T  32814946 gtcaagtagtccagtggttaaaattcaccttttttta-tatgaataagtggggtgtccgggattcgaactccgacccctgcatataataatgcatgtccc 32814848  T
Q  863 tgccaactgaattatgctcacgg 885  Q
    | ||||||||  |||||||||||    
T  32814847 taccaactgagctatgctcacgg 32814825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 775 - 883
Target Start/End: Complemental strand, 44409309 - 44409201
Alignment:
Q  775 ctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactga 872  Q
    |||||||||||||||| ||||||| ||| ||||||||| ||||| |  | ||||||||| || |||  |||||||||||| ||||||| |||| ||||||    
T  44409309 ctagtggttagaattcaccttttt-caaggtgaataagtggggtgttcg-ggttcgaaccccgacccttgcatataataatgcatgtccctgctaactga 44409212  T
Q  873 attatgctcac 883  Q
     ||||||||||    
T  44409211 gttatgctcac 44409201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 766 - 869
Target Start/End: Original strand, 32309125 - 32309229
Alignment:
Q  766 tcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctct 863  Q
    ||||| |||||||||| |||||||| | |||||| || ||||||||  ||||| |||||| |||||||||| |||  ||||||||| || ||||||| ||    
T  32309125 tcaagtagtctagtggctagaattcacatttttt-aaggtgaataactggggtgtctgagattcgaactccgacccctgcatataacaatgcatgtccct 32309223  T
Q  864 gccaac 869  Q
    ||||||    
T  32309224 gccaac 32309229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 842 - 886
Target Start/End: Original strand, 32514690 - 32514734
Alignment:
Q  842 gcatataataaggcatgtctctgccaactgaattatgctcacggg 886  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||    
T  32514690 gcatataataatacatgtctctgccaactgaactatgctcacggg 32514734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 806 - 886
Target Start/End: Original strand, 45267942 - 45268024
Alignment:
Q  806 gaataagcggggtatctgaggttcgaactccaac--ctgcatataataaggcatgtctctgccaactgaattatgctcacggg 886  Q
    ||||||| ||||| |||  |||||||||||| ||  |||||||||||||   |||||||||||||||||  ||||||||||||    
T  45267942 gaataagtggggtgtctatggttcgaactccgactcctgcatataataatatatgtctctgccaactgagctatgctcacggg 45268024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 332
Target Start/End: Complemental strand, 4939063 - 4939025
Alignment:
Q  294 aatatattaacaacggcgatgaattctctatagcacaag 332  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  4939063 aatatattaacaacggcgatgaactctcgatagcacaag 4939025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 854 - 888
Target Start/End: Original strand, 14772401 - 14772435
Alignment:
Q  854 gcatgtctctgccaactgaattatgctcacgggaa 888  Q
    ||||||||||||||||||| |||||||||||||||    
T  14772401 gcatgtctctgccaactgagttatgctcacgggaa 14772435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 854 - 888
Target Start/End: Original strand, 15222853 - 15222887
Alignment:
Q  854 gcatgtctctgccaactgaattatgctcacgggaa 888  Q
    ||||||||||||||||||| |||||||||||||||    
T  15222853 gcatgtctctgccaactgagttatgctcacgggaa 15222887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 793 - 872
Target Start/End: Complemental strand, 19924859 - 19924778
Alignment:
Q  793 cttttttcaatgtgaataagcggggtatctgaggttcgaactccaac--ctgcatataataaggcatgtctctgccaactga 872  Q
    ||||||| || ||||||||| ||||||| || | |||||||||  ||  ||||||||||||| ||||||| |||||||||||    
T  19924859 ctttttttaaggtgaataagtggggtatatgggattcgaactctcacttctgcatataataatgcatgtccctgccaactga 19924778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 765 - 887
Target Start/End: Complemental strand, 11808158 - 11808034
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctc 862  Q
    |||||| |||||||| |||||||||| | |||||  || ||||||||| ||||| || | ||||||||| || |||  ||||||||| || ||||||| |    
T  11808158 gtcaagtagtctagttgttagaattcacgtttttctaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccc 11808059  T
Q  863 tgccaactgaattatgctcacggga 887  Q
    | |||| |||  || ||||||||||    
T  11808058 taccaattgagctaagctcacggga 11808034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 776 - 882
Target Start/End: Original strand, 43712300 - 43712407
Alignment:
Q  776 tagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataaggcatgtctctgccaactgaa 873  Q
    |||||| |||||||| ||||||| ||| | | ||||| |||||||| ||||||||||| || |  |||| |||||| || ||||||| || ||||||||     
T  43712300 tagtggctagaattctccttttt-caaggaggataagtggggtatccgaggttcgaaccccgacccctgtatataacaatgcatgtccctaccaactgag 43712398  T
Q  874 ttatgctca 882  Q
    |||||||||    
T  43712399 ttatgctca 43712407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 271; Significance: 1e-151; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 291 - 625
Target Start/End: Complemental strand, 856419 - 856085
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataag 390  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| |||    
T  856419 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactaaagaggtcaccccaaagaacaaacactcactacataattacaaaaacaag 856320  T
Q  391 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatac 490  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  856319 ttagtcgatacccaaacaaagtaacgagtccgaccaccatctactcgtgccataaacaaagttggcattgttagctttcagccaccacaatgaattatac 856220  T
Q  491 ttaaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagca 590  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  856219 ttaaccttttctacaagatctatcatagtaagttgggtgttattgaaaattatattatttctttcgtgccaatcaatccatacacacaagagccaaagca 856120  T
Q  591 tttgcatgattgtccggcgcttcgtcgacccacca 625  Q
     ||||||||||||||||||||| ||||||||||||    
T  856119 cttgcatgattgtccggcgctttgtcgacccacca 856085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 291 - 625
Target Start/End: Original strand, 3704213 - 3704546
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataag 390  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| ||     
T  3704213 tggattatattaacaacggcgatgaattctctatagcacaaggtgtattaaagaggtcaccccaaagaacaaacagtcactacataattacaaaaaaaa- 3704311  T
Q  391 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatac 490  Q
    | ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  3704312 tgagtcgatacccaaacaaagtaacgggtccgaccaccatctacccgtgccataaacaaagttggcattgttagctttcagccaccacaatgaattatac 3704411  T
Q  491 ttaaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagca 590  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  3704412 ttaaccttttttacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgccaaataatccatacacacaagagccaaagca 3704511  T
Q  591 tttgcatgattgtccggcgcttcgtcgacccacca 625  Q
    |||||||||||||||||||||||||||||||||||    
T  3704512 tttgcatgattgtccggcgcttcgtcgacccacca 3704546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 291 - 625
Target Start/End: Complemental strand, 34833219 - 34832885
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataag 390  Q
    ||||||||||||||||||||| || | |||||  |||||||||||||||| ||| | |||||||||||| ||||| ||||   ||||||||||||| |||    
T  34833219 tggaatatattaacaacggcggtgtactctctgaagcacaaggtgtactacagaagccaccccaaagaacaaacattcacagaataattacaaaaacaag 34833120  T
Q  391 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatac 490  Q
    | |||||||||||||||||||||||||||||||||||||||||   ||||| |||||||| ||||| ||||| ||||||| ||||||||| |||||||||    
T  34833119 tcagtcgatacccaaacaaagtaacgggtccgaccaccatctaaacgtgccgtaaacaaaattggcgttgttggctttcagccaccacaatgaatgatac 34833020  T
Q  491 ttaaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagca 590  Q
    |||||||||||||||||||| | |||| ||| ||| | ||| ||||| ||||||||||||||||| |  ||||| ||||| |||||||| ||||||| ||    
T  34833019 ttaaccttttctacaagatcgaacatattaacttgggaattcttgaatattctattatttctttcattccaaactatccacacacacaaaagccaaatca 34832920  T
Q  591 tttgcatgattgtccggcgcttcgtcgacccacca 625  Q
    | ||||||| | |||| ||||| ||||||||||||    
T  34832919 tctgcatgaatatccgacgctttgtcgacccacca 34832885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 291 - 501
Target Start/End: Original strand, 39072621 - 39072831
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaa-aaataa 389  Q
    ||||||||||||||||||||||||  | |||| ||||||||||||||||| ||| | |||||||||||| ||||||||||   |||||||||| ||| |     
T  39072621 tggaatatattaacaacggcgatgt-tcctctttagcacaaggtgtactaaagaagccaccccaaagaacaaacagtcacagtataattacaataaacag 39072719  T
Q  390 gttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgata 489  Q
    || |||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||| ||| ||||||||||||||| |||||| || |||| ||     
T  39072720 gtcagtcgatatccaaacaaagtaacgggtccgactaccatctaatcgtgccataaacaaacttgacattgttagctttcagccaccaaaaggaattatg 39072819  T
Q  490 cttaaccttttc 501  Q
    ||||||||||||    
T  39072820 cttaaccttttc 39072831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 293 - 507
Target Start/End: Original strand, 13352095 - 13352311
Alignment:
Q  293 gaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaat-aaacagtcactacataattacaaaa-ataag 390  Q
    ||||||||||||| |||||||| || ||||| |||| |||||||| |  |||||||| |||||| ||  |||||| ||||| ||||||| |||  ||| |    
T  13352095 gaatatattaacaccggcgatggatcctctaaagcataaggtgtattgaagaggtcatcccaaaaaaacaaacagccactatataattataaaggatagg 13352194  T
Q  391 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatac 490  Q
    | |||||||||||||||| |||||||||||||||||| |  ||    || |||||||||| ||| |||||| |||||| | |||||| |  |||| |||     
T  13352195 tcagtcgatacccaaacatagtaacgggtccgaccactagttatgattgtcataaacaaaattgacattgtgagctttaagccaccaaatggaattatag 13352294  T
Q  491 ttaaccttttctacaag 507  Q
    |||||||||||||||||    
T  13352295 ttaaccttttctacaag 13352311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 291 - 384
Target Start/End: Complemental strand, 20931082 - 20930989
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaa 384  Q
    ||||||||||||||| || ||||   ||||||| |||||||||||||||| ||||||||||||||| || |||||||||||  |||||||||||    
T  20931082 tggaatatattaacaccgacgatagtttctctagagcacaaggtgtactaaagaggtcaccccaaaaaacaaacagtcactgtataattacaaa 20930989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 765 - 888
Target Start/End: Original strand, 39334857 - 39334981
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctc 862  Q
    |||||| |||||||||| |||||||| ||||||| ||| ||||||||| ||| | ||||  |||||||| ||| ||  || ||||||||| ||||||| |    
T  39334857 gtcaagtagtctagtggctagaattcaccttttt-caaagtgaataagtgggatgtctggagttcgaaccccagcccctgtatataataatgcatgtccc 39334955  T
Q  863 tgccaactgaattatgctcacgggaa 888  Q
    |||||||||| |||||||||||||||    
T  39334956 tgccaactgagttatgctcacgggaa 39334981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 765 - 886
Target Start/End: Complemental strand, 34107393 - 34107271
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctc 862  Q
    |||||| |||||||||| |||||||| | ||||| ||| ||||||||| ||||| ||||  ||||||||  |||||  |||||||||| |  |||||| |    
T  34107393 gtcaagtagtctagtggctagaattcacattttt-caaggtgaataagtggggtgtctggagttcgaacctcaacccctgcatataattatacatgtccc 34107295  T
Q  863 tgccaactgaattatgctcacggg 886  Q
    ||||||||||  ||||||||||||    
T  34107294 tgccaactgagctatgctcacggg 34107271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 775 - 872
Target Start/End: Original strand, 44132548 - 44132647
Alignment:
Q  775 ctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacct--gcatataataaggcatgtctctgccaactga 872  Q
    ||||||||||| |||  |||||||||||  ||||||| |||||| ||||  |||||||| || ||||  |||||||| || |||||||||||||||||||    
T  44132548 ctagtggttagtatttaccttttttcaagatgaataaacggggtgtctggagttcgaaccccgacctctgcatataacaatgcatgtctctgccaactga 44132647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 772 - 884
Target Start/End: Complemental strand, 1244681 - 1244568
Alignment:
Q  772 agtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaac 869  Q
    |||||||||| |||||||| ||||||| ||| ||||||||| ||||| || | ||||||||| || |||  ||||||||  || | ||||| ||||||||    
T  1244681 agtctagtggctagaattcaccttttt-caaggtgaataagtggggtgtccggggttcgaacccccacccctgcatatagcaatgtatgtccctgccaac 1244583  T
Q  870 tgaattatgctcacg 884  Q
    |||| ||||||||||    
T  1244582 tgaactatgctcacg 1244568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 765 - 886
Target Start/End: Original strand, 20942085 - 20942204
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactcca--acctgcatataataaggcatgtctc 862  Q
    |||||| |||||||||  |||||||| | ||||||||| ||||||||| | ||| |||| |||||||||||||   ||| |||||||| | ||||||| |    
T  20942085 gtcaagtagtctagtgactagaattcac-ttttttcaaggtgaataagtgaggtgtctggggttcgaactccatcccctacatataattatgcatgtccc 20942183  T
Q  863 tgccaactgaattatgctcacggg 886  Q
    |||||||||   ||||||||||||    
T  20942184 tgccaactg---tatgctcacggg 20942204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 794 - 887
Target Start/End: Complemental strand, 32288467 - 32288372
Alignment:
Q  794 ttttttcaatgtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataaggcatgtctctgccaactgaattatgctcacggga 887  Q
    ||||||||| ||||||||| ||||| || ||||||||||| || |  ||| |||||||||| |||||| |||| |||||||  || ||||||||||    
T  32288467 ttttttcaaggtgaataagtggggtgtccgaggttcgaaccccgatccctacatataataatgcatgtttctgtcaactgagctacgctcacggga 32288372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 765 - 884
Target Start/End: Original strand, 38581582 - 38581701
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacct-gcatataataaggcatgtctct 863  Q
    |||||| || |||||||||||||| | |||||||| ||  |||||||| ||| | || ||||||||||   |||| | ||||||||||| | ||||||||    
T  38581582 gtcaagtagcctagtggttagaatacacctttttt-aagatgaataagtgggatgtccgaggttcgaatctcaacgttgcatataataatgtatgtctct 38581680  T
Q  864 gccaactgaattatgctcacg 884  Q
     |||||||| |||||||||||    
T  38581681 accaactgagttatgctcacg 38581701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 783 - 888
Target Start/End: Complemental strand, 38807983 - 38807876
Alignment:
Q  783 tagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataaggcatgtctctgccaactgaattatgct 880  Q
    |||||||| | ||||||||| ||||||||| | ||| |||| ||||||||   ||   |||||||||||| | ||||||| ||||||||||| |||| ||    
T  38807983 tagaattcactttttttcaaggtgaataagtgcggtgtctggggttcgaatctcattccctgcatataattatgcatgtccctgccaactgagttatact 38807884  T
Q  881 cacgggaa 888  Q
    ||||||||    
T  38807883 cacgggaa 38807876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 782 - 885
Target Start/End: Complemental strand, 2057581 - 2057479
Alignment:
Q  782 ttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacctgcatataataaggcatgtctctgccaactgaattatgctc 881  Q
    ||||||||| |||||||| || ||||||||| ||||| || | | ||||||||| | ||||||||||| || | || || |||||||||||  |||||||    
T  2057581 ttagaattcacctttttt-aaggtgaataagtggggtgtccgggattcgaactcgaccctgcatataacaatgtatatccctgccaactgagctatgctc 2057483  T
Q  882 acgg 885  Q
    ||||    
T  2057482 acgg 2057479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 397 - 432
Target Start/End: Original strand, 31265814 - 31265849
Alignment:
Q  397 gatacccaaacaaagtaacgggtccgaccaccatct 432  Q
    |||||||||||||||||| |||||||||||||||||    
T  31265814 gatacccaaacaaagtaaagggtccgaccaccatct 31265849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 839 - 885
Target Start/End: Original strand, 917342 - 917388
Alignment:
Q  839 cctgcatataataaggcatgtctctgccaactgaattatgctcacgg 885  Q
    |||||||||||||| |||||||||| |||||||| ||| ||||||||    
T  917342 cctgcatataataatgcatgtctctaccaactgagttaagctcacgg 917388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 804 - 887
Target Start/End: Complemental strand, 3179405 - 3179320
Alignment:
Q  804 gtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataaggcatgtctctgccaactgaattatgctcacggga 887  Q
    ||||||||| ||||| ||||||||||||||  | |  |||||||||||||| ||||   ||| |||||||| ||||||||||||||    
T  3179405 gtgaataagtggggtgtctgaggttcgaacctcgacccctgcatataataatgcattgttctaccaactgagttatgctcacggga 3179320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 804 - 886
Target Start/End: Original strand, 21970453 - 21970538
Alignment:
Q  804 gtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataaggca-tgtctctgccaactgaattatgctcacggg 886  Q
    |||||||||||||||||| | ||||||||| || |  |||||||||||||| ||| |||| ||| |||||||  ||||||||||||    
T  21970453 gtgaataagcggggtatccggggttcgaaccccgatccctgcatataataatgcattgtccctgtcaactgagctatgctcacggg 21970538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1034 - 1076
Target Start/End: Complemental strand, 26545950 - 26545908
Alignment:
Q  1034 agctaaattaacatacctaaattgacatcgaagagaatcaaac 1076  Q
    ||||||||||||  ||||||||||| |||||||||||||||||    
T  26545950 agctaaattaacccacctaaattgatatcgaagagaatcaaac 26545908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 839 - 885
Target Start/End: Complemental strand, 34376586 - 34376540
Alignment:
Q  839 cctgcatataataaggcatgtctctgccaactgaattatgctcacgg 885  Q
    ||||||||||| || ||||||| |||||||||||||||| |||||||    
T  34376586 cctgcatataacaatgcatgtccctgccaactgaattatactcacgg 34376540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 395 - 432
Target Start/End: Original strand, 6823001 - 6823038
Alignment:
Q  395 tcgatacccaaacaaagtaacgggtccgaccaccatct 432  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  6823001 tcgatacccaaacaaagtaaagggttcgaccaccatct 6823038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 844 - 885
Target Start/End: Original strand, 22014713 - 22014754
Alignment:
Q  844 atataataaggcatgtctctgccaactgaattatgctcacgg 885  Q
    ||||||||| ||||||||||| |||||||| |||||||||||    
T  22014713 atataataatgcatgtctctgtcaactgaactatgctcacgg 22014754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 804 - 885
Target Start/End: Complemental strand, 44187785 - 44187701
Alignment:
Q  804 gtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatg-tctctgccaactgaattatgctcacgg 885  Q
    ||||||||| ||||| |||| ||||||||| || |||  |||||||||||| ||||  || |||||||||||| |||||||||||    
T  44187785 gtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcattatccctgccaactgaactatgctcacgg 44187701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 776 - 886
Target Start/End: Original strand, 44487754 - 44487865
Alignment:
Q  776 tagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactgaa 873  Q
    ||||||||||||||| |||||||| || ||||||||| ||| | || | ||||||||||||  ||  |||||||||||| ||||||| ||  |||||||     
T  44487754 tagtggttagaattcacctttttt-aaggtgaataagtgggatgtccggggttcgaactccggcccttgcatataataatgcatgtccctatcaactgag 44487852  T
Q  874 ttatgctcacggg 886  Q
     ||| ||||||||    
T  44487853 ctatactcacggg 44487865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 375 - 432
Target Start/End: Original strand, 45126361 - 45126418
Alignment:
Q  375 taattacaaaaataagttagtcgatacccaaacaaagtaacgggtccgaccaccatct 432  Q
    ||||||||  |||| || |||||||||||||| ||||||| ||||| |||||||||||    
T  45126361 taattacatcaataggtcagtcgatacccaaataaagtaaagggtctgaccaccatct 45126418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 267; Significance: 1e-148; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 291 - 625
Target Start/End: Complemental strand, 38356346 - 38356012
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataag 390  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||  | ||||||| ||||||||||||||||||||    
T  38356346 tggaatatattaacaacggcgatgaaatctctatagcacaaggtgtactaaagaggtcaccccaaagaccatacagtcattacataattacaaaaataag 38356247  T
Q  391 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatac 490  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| | |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  38356246 ttagtcgatacccaaacaaagtaacaggtccgaccaccacctattcgtgccataaacaaagttggcattgttagctttcagccaccacaatgaattatac 38356147  T
Q  491 ttaaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagca 590  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38356146 ttaatcttttctacaagatctatcatagcaagttgtgtattattgaaaattctattatttctttcgtgccaaacaatccatacacacaagagccaaagca 38356047  T
Q  591 tttgcatgattgtccggcgcttcgtcgacccacca 625  Q
    ||||||||||||||| |||||||||||||||||||    
T  38356046 tttgcatgattgtccagcgcttcgtcgacccacca 38356012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 291 - 625
Target Start/End: Complemental strand, 52195264 - 52194930
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataag 390  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| || | ||||||||||||| ||||||||||| |||||||||||||| |||    
T  52195264 tggaatatattaacaactgcggtgaattctctatagcacaaggtgtactaaagcgatcaccccaaagaacaaacagtcactgcataattacaaaaacaag 52195165  T
Q  391 ttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatac 490  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||    
T  52195164 ttagtcgatacccaaaaaaagtaacgggtccgaccaccatctactcgtgccataaacaaagttggcattgttagctttcagccaccgcaatgaattatac 52195065  T
Q  491 ttaaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagca 590  Q
    ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||  ||||| ||||| | |||||||||||||||||    
T  52195064 ttaaccttttctacaagatctatcatattaagttgggtattgttgaaaattctatcatttctttcgttccaaactatccacatacacaagagccaaagca 52194965  T
Q  591 tttgcatgattgtccggcgcttcgtcgacccacca 625  Q
    |||||||||||||||||||||| ||||| ||||||    
T  52194964 tttgcatgattgtccggcgctttgtcgatccacca 52194930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 292 - 625
Target Start/End: Original strand, 55366097 - 55366430
Alignment:
Q  292 ggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataagt 391  Q
    |||||||||||||||||||| || | ||| |  |||||||||||||||| ||| | |||||||||||| ||||| ||||   ||||||||||||| ||||    
T  55366097 ggaatatattaacaacggcggtgtactctttgaagcacaaggtgtactacagaagccaccccaaagaacaaacattcacagaataattacaaaaacaagt 55366196  T
Q  392 tagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatact 491  Q
     |||||||||||||||||||||||||||||||||||||||     ||||| |||||||| ||||| ||||| ||||||| ||||||||| ||||||||||    
T  55366197 cagtcgatacccaaacaaagtaacgggtccgaccaccatcggaacgtgccgtaaacaaaattggcgttgttggctttcagccaccacaatgaatgatact 55366296  T
Q  492 taaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagcat 591  Q
    ||||||||||||||||||| | |||| ||| ||| | ||| |||||  ||||||||||||||||||  ||||| ||||| |||||||| ||||||| |||    
T  55366297 taaccttttctacaagatcgaacatattaacttgggaattcttgaatgttctattatttctttcgttccaaactatccacacacacaaaagccaaatcat 55366396  T
Q  592 ttgcatgattgtccggcgcttcgtcgacccacca 625  Q
     ||||||| | |||||||||| ||||||||||||    
T  55366397 ctgcatgaatatccggcgctttgtcgacccacca 55366430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 294 - 557
Target Start/End: Complemental strand, 53272872 - 53272610
Alignment:
Q  294 aatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataagtta 393  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||||| ||||| |||||| || || || ||||||||  ||||||||||||| ||||||    
T  53272872 aatatattaacaacggcggtgacttctctataacacaaggtgtactaaagaggccacccctaataacaagcagtcactgaataattacaaaaacaagtta 53272773  T
Q  394 gtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatactta 493  Q
    |||||||| |||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||| ||| |||    
T  53272772 gtcgatactcaaataaagtaatgtgtccgaccaccatctactcgtgccataaacaaagttggcattgttagctttcagccaccacaataaattatagtta 53272673  T
Q  494 accttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgt 557  Q
    ||| || || |||||||||||||| |||| || ||| | ||||| |||||||||||| ||||||    
T  53272672 acc-ttcctgcaagatctatcatattaagatgagtaatcttgaatattctattatttttttcgt 53272610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 293 - 612
Target Start/End: Complemental strand, 1660706 - 1660393
Alignment:
Q  293 gaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaaataagtt 392  Q
    |||||||||||||||||| |||||| || | ||||| || |||||||| |||   |||||||||||| || ||||      ||||||||||||| ||||     
T  1660706 gaatatattaacaacggcaatgaatcctatttagcataaagtgtactaaagaaaccaccccaaagaacaagcagtgt----ataattacaaaaacaagtc 1660611  T
Q  393 agtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttc-atccaccacaaagaatgatact 491  Q
    ||| |||| |||||||| ||||||| |  || ||||||||||| |||||||||| ||||||| |||||||||||||  | ||||||||| |||| |||||    
T  1660610 agttgatatccaaacaa-gtaacggatttgatcaccatctactcgtgccataaataaagttgccattgttagctttttagccaccacaatgaattatact 1660512  T
Q  492 taaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagccaaagcat 591  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||| |||| ||||||||||||||  ||||| ||||  |||||||| | |||||||||    
T  1660511 taaccttttctacaagatctatcatattaagttgggtattcttgaatattccattatttctttcgttccaaactatcc--acacacaaaaaccaaagcat 1660414  T
Q  592 ttgcatgattgtccggcgctt 612  Q
     ||||||| ||||||| ||||    
T  1660413 ctgcatgaatgtccggtgctt 1660393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 294 - 503
Target Start/End: Complemental strand, 36624469 - 36624258
Alignment:
Q  294 aatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcacccca-aagaataaacagtcactacataattacaaaa-ataagt 391  Q
    |||||||||| |  |||||||||||||||  |||||||||||||||  ||||| ||||||| ||||| |||||||||||  |||||||||||  | | ||    
T  36624469 aatatattaatactggcgatgaattctcttcagcacaaggtgtactcaagaggccaccccataagaacaaacagtcactgtataattacaaaggagaggt 36624370  T
Q  392 tagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatact 491  Q
     ||||||||||||||||||||||| |||||||||||||  ||    ||||||||||||| |||||||||| |||||| | |||||| | ||| ||||| |    
T  36624369 cagtcgatacccaaacaaagtaacaggtccgaccaccagttatgattgccataaacaaaattggcattgtgagctttaagccaccaaagagattgatatt 36624270  T
Q  492 taaccttttcta 503  Q
    | ||||||||||    
T  36624269 tcaccttttcta 36624258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 329 - 509
Target Start/End: Original strand, 18380576 - 18380759
Alignment:
Q  329 caaggtgtactagagaggtcaccccaaa--gaataaacagtcactacataattacaaaa-ataagttagtcgatacccaaacaaagtaacgggtccgacc 425  Q
    |||||||||||| |||||||||||||||  ||| ||||| ||| |   ||||||||||  | | || ||| |||||||||||| |||||||||| |||||    
T  18380576 caaggtgtactaaagaggtcaccccaaaaagaacaaacaatcaatttgtaattacaaaggagaggtcagttgatacccaaacacagtaacgggttcgacc 18380675  T
Q  426 accatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatacttaaccttttctacaagat 509  Q
    ||||  ||    ||||||||||||| |||||||||| || ||| | |||||| | ||||||||| ||||| ||||||| |||||    
T  18380676 accaattatgattgccataaacaaaattggcattgtgagatttaagccaccagagagaatgatatttaactttttctaaaagat 18380759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 765 - 881
Target Start/End: Complemental strand, 33533322 - 33533205
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctc 862  Q
    |||||| |||||||| |||||||||| | |||||| || ||||||||| ||| | |||  ||||||||| ||||||  | ||||||| || |||||||||    
T  33533322 gtcaagtagtctagttgttagaattcacttttttt-aaggtgaataagtgggatgtctatggttcgaaccccaaccactacatataacaatgcatgtctc 33533224  T
Q  863 tgccaactgaattatgctc 881  Q
    |||||||||| ||||||||    
T  33533223 tgccaactgagttatgctc 33533205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 795 - 883
Target Start/End: Original strand, 31108765 - 31108855
Alignment:
Q  795 tttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactgaattatgctcac 883  Q
    |||||||| ||||||||| ||||| |||  ||||||||| ||| ||  |||||||||| | ||||||| ||||||||||| ||||||||||    
T  31108765 tttttcaaggtgaataagtggggtgtctcgggttcgaaccccagcccctgcatataattatgcatgtccctgccaactgagttatgctcac 31108855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 796 - 872
Target Start/End: Original strand, 34407096 - 34407174
Alignment:
Q  796 ttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactga 872  Q
    |||||||  |||||||| ||||| |||| ||||||||| ||||||  |||||||||||| ||||||| |||||||||||    
T  34407096 ttttcaagatgaataagtggggtgtctggggttcgaaccccaacccctgcatataataatgcatgtccctgccaactga 34407174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 393 - 432
Target Start/End: Complemental strand, 46249412 - 46249373
Alignment:
Q  393 agtcgatacccaaacaaagtaacgggtccgaccaccatct 432  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  46249412 agtcgatacccaaacaaagtaaagggtccgaccaccatct 46249373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 839 - 885
Target Start/End: Complemental strand, 28951910 - 28951864
Alignment:
Q  839 cctgcatataataaggcatgtctctgccaactgaattatgctcacgg 885  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||    
T  28951910 cctgcatataataatgcatgtatctgccaactgagttatgctcacgg 28951864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 843 - 888
Target Start/End: Complemental strand, 16985060 - 16985015
Alignment:
Q  843 catataataaggcatgtctctgccaactgaattatgctcacgggaa 888  Q
    |||||||||| | ||||||||||||||||||||||| |||||||||    
T  16985060 catataataatgaatgtctctgccaactgaattatgttcacgggaa 16985015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 843 - 884
Target Start/End: Complemental strand, 19149464 - 19149423
Alignment:
Q  843 catataataaggcatgtctctgccaactgaattatgctcacg 884  Q
    |||||||||| ||||||||||| |||||||||||||||||||    
T  19149464 catataataatgcatgtctctgtcaactgaattatgctcacg 19149423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 21398428 - 21398477
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtacta 340  Q
    |||||||||||||||||||||||||| ||||  ||| |||||||||||||    
T  21398428 tggaatatattaacaacggcgatgaaatctcattagtacaaggtgtacta 21398477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 839 - 886
Target Start/End: Original strand, 38555078 - 38555126
Alignment:
Q  839 cctgcatataataaggcat-gtctctgccaactgaattatgctcacggg 886  Q
    |||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  38555078 cctgcatataataatgcattgtctctgccaactgaactatgctcacggg 38555126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 393 - 432
Target Start/End: Original strand, 4963949 - 4963988
Alignment:
Q  393 agtcgatacccaaacaaagtaacgggtccgaccaccatct 432  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  4963949 agtcgatacccagacaaagtaaagggtccgaccaccatct 4963988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 839 - 886
Target Start/End: Original strand, 6951841 - 6951888
Alignment:
Q  839 cctgcatataataaggcatgtctctgccaactgaattatgctcacggg 886  Q
    |||||||||||||| ||||||| ||| ||||||| |||||||||||||    
T  6951841 cctgcatataataatgcatgtccctgtcaactgagttatgctcacggg 6951888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 765 - 884
Target Start/End: Original strand, 24160504 - 24160624
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctc 862  Q
    |||||| ||||| |||| ||||||||  ||||||  || ||||||||| || || || | ||||||||| || |||  ||||||||| |  |||||||||    
T  24160504 gtcaagtagtctggtggctagaattcaactttttgaaa-gtgaataagtggagtgtccggggttcgaaccccgacccctgcatataacagtgcatgtctc 24160602  T
Q  863 tgccaactgaattatgctcacg 884  Q
    |||||||||| |||||||||||    
T  24160603 tgccaactgagttatgctcacg 24160624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 793 - 872
Target Start/End: Complemental strand, 51017881 - 51017801
Alignment:
Q  793 cttttttcaatgtgaataagcggggtatctgaggttcgaactccaac--ctgcatataataaggcatgtctctgccaactga 872  Q
    |||||||||| ||||||||| ||||| || | |||||||||||| ||  |||||||||| || ||||||| |||||||||||    
T  51017881 cttttttcaaagtgaataagtggggtgtccg-ggttcgaactccgactcctgcatataacaatgcatgtccctgccaactga 51017801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 847 - 884
Target Start/End: Complemental strand, 6284913 - 6284876
Alignment:
Q  847 taataaggcatgtctctgccaactgaattatgctcacg 884  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  6284913 taataatgcatgtccctgccaactgaattatgctcacg 6284876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 439 - 492
Target Start/End: Original strand, 10349662 - 10349715
Alignment:
Q  439 gccataaacaaagttggcattgttagctttcatccaccacaaagaatgatactt 492  Q
    |||||||||||| ||||||||||| ||||| | |||||| ||||||| ||||||    
T  10349662 gccataaacaaaattggcattgtttgctttaagccaccataaagaataatactt 10349715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 766 - 888
Target Start/End: Original strand, 49299217 - 49299339
Alignment:
Q  766 tcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacctg--catataataaggcatgtctct 863  Q
    ||||| |||||||||| ||||||||  |||| | ||| ||||||||| || || |||| ||||||||| ||| |||   |||||||| | ||||||| ||    
T  49299217 tcaagtagtctagtggctagaattcagctttct-caaggtgaataagtggagtgtctg-ggttcgaaccccagcctttacatataattatgcatgtccct 49299314  T
Q  864 gccaactgaattatgctcacgggaa 888  Q
    | |||||||| ||||||||||||||    
T  49299315 gtcaactgaactatgctcacgggaa 49299339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-101; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 11 - 269
Target Start/End: Complemental strand, 24653654 - 24653388
Alignment:
Q  11 tggacatcatacattgtgaccaataacattaaattgtttaaatatacaaacaaatatgatatgatgcaatttattctaaaaga----gtttattcctatg 106  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |    | ||||||||||     
T  24653654 tggacatcatacattgtgaccattaacattaaattgtttaaatatacaaacaaatatgatatgatgcaatttattacaaaaaaaaaaggttattcctata 24653555  T
Q  107 agtttcctagacacaaattcattttaattttttat---aagttt-catttagtgatagctaattatttcaaaaataaataaatattagtgagagctaatc 202  Q
    |||| |||||||||||||||||||||||||||| |   |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24653554 agttacctagacacaaattcattttaatttttttttttaagttttcatttagtgatagctaattatttcaaaaataaataaatattagtgagagctaatc 24653455  T
Q  203 ttattagggacaatatctgccgagagtttaatttcttcggctaaatctaattccagttgacacataa 269  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24653454 ttattagagacaatatctcccgagagtttaatttcttcggctaaatctaattccagttgacacataa 24653388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 630 - 1115
Target Start/End: Complemental strand, 24653402 - 24652904
Alignment:
Q  630 ccagttgacacataattaatttgcaaacatttaataaagnnnnnnnn-aaggagaacatttaattaagttatcaannnnnnngttaaataaagttaccaa 728  Q
    ||||||||||||||||||||||||||||| |||||||||         ||||| |||||||||| ||||||||||       |||||||||||||| |||    
T  24653402 ccagttgacacataattaatttgcaaacacttaataaagttttttatgaaggataacatttaataaagttatcaatttttttgttaaataaagttatcaa 24653303  T
Q  729 tttattaagtatttattcaaaataaacannnnnnnngtc--aagg-agtctagtggttagaattcgccttttttc-aatgtgaataagcggggtatctga 824  Q
    ||||||||||||||||| ||||||||||         |   |||  |||||| |||||||||||| | ||||||| |||||||||||| || || |||||    
T  24653302 tttattaagtatttatttaaaataaacatacatttttttttaagttagtctaatggttagaattcactttttttctaatgtgaataagtggagtgtctga 24653203  T
Q  825 ggttcgaactccaacc--tgcatataataaggcatgtctctgccaactgaattatgctcacgggaaaaaacaaacatacatacatgcaaataacttttan 922  Q
      ||||||| ||||||  |||||||||||| |||||||| |||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||      
T  24653202 aattcgaaccccaacccctgcatataataatgcatgtct-tgccaactgagttatgctcacgggacaaaataaacatacatacatgcaaataacttttta 24653104  T
Q  923 nnnnnnacaaa--tgcatgcaaacaacacgtgtaagtctctaactcggagac-tttcctttcttttcattacaaaatgaatttggatcattggat----a 1015  Q
            |||  ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    |    
T  24653103 ttttttttaaaattgcatgcaaacaacacgtgtaagtctctaactcggagacctttccttttttttcattacaaaatgaatttggatcattggatatata 24653004  T
Q  1016 tattaannnnnnnnatgaagctaaattaacatacctaaattgacatcgaagagaatcaaacccgatactttatactttaaagaggaacacattctcaaat 1115  Q
    ||||||        |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || |||||    
T  24653003 tattaatttttgttatgaagctaaattagcatacctaaattgacatcgaagagaatcaaacccgatactttatactctaaggaggaacacactcccaaat 24652904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 27 - 269
Target Start/End: Complemental strand, 24651626 - 24651388
Alignment:
Q  27 tgaccaataacattaaattgtttaaatatacaaacaaatatgatatgatgcaatttattctaaaagagtttattcctatgagtttcctagacacaaattc 126  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||| |||| |||| |||||||||     
T  24651626 tgaccattaacattaaattgtttaaatatacaaacaaatatgatatgttgtaatttattctaaaa-agtttattcctataagttacctacacacaaatta 24651528  T
Q  127 attttaatttttt-ataagtttcatttagtgatagctaattatttcaaaaataaataaatattagtgagagctaatcttattagggacaatatctgccga 225  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| |||||||||||||||    
T  24651527 attttaatttttttataagttgcatttagtgatagctaattatttcaaaaataaata----ttagtgagagctaatcttattagagacaatatctgccga 24651432  T
Q  226 gagtttaatttcttcggctaaatctaattccagttgacacataa 269  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  24651431 gagtttaatttcttcggctaaatctaattccagttgatacataa 24651388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 29418556 - 29418655
Alignment:
Q  133 attttttataagtttcatttagtgatagctaattatttcaaaaataaataaatattagtgagagctaatcttattagggacaatatctgccgagagttta 232  Q
    |||||||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||||||||   |||| |||||||||||||||||    
T  29418556 attttttataagtttcatttagtgatagatgatttttt-aaaaataaataaatattagtgagagctaatcttattgaagacactatctgccgagagttta 29418654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 630 - 756
Target Start/End: Complemental strand, 24651402 - 24651274
Alignment:
Q  630 ccagttgacacataattaatttgcaaacatttaataaagnnnnnnnn-aaggagaacatttaattaagttatcaannnnnnn-gttaaataaagttacca 727  Q
    |||||||| ||||||||||||||||||||||||||||||         ||||| |||||||||| ||||||||||        |||||||||||||||||    
T  24651402 ccagttgatacataattaatttgcaaacatttaataaagtcttttttgaaggaaaacatttaataaagttatcaattttttttgttaaataaagttacca 24651303  T
Q  728 atttattaagtatttattcaaaataaaca 756  Q
    |||||||||||||||||| ||||||||||    
T  24651302 atttattaagtatttatttaaaataaaca 24651274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 1114 - 1177
Target Start/End: Complemental strand, 24652179 - 24652116
Alignment:
Q  1114 atgttgttgatatgagttatctaatggcttcaaacagttgtctgtgtcatacttgatgtccatc 1177  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  24652179 atgttgttgatatgagttatctaacggcttcaaacagttgtctgtgtcatacttgctctccatc 24652116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 293 - 585
Target Start/End: Complemental strand, 29488907 - 29488616
Alignment:
Q  293 gaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaaaa-ataagt 391  Q
    |||||||||||||  ||||||| || ||||| ||||||||||||| || ||||  ||||||||| || ||| |||||||  |||||||||||  | | |     
T  29488907 gaatatattaacactggcgatggatcctctaaagcacaaggtgtattaaagagaccaccccaaa-aacaaatagtcactgtataattacaaaggagaggc 29488809  T
Q  392 tagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatact 491  Q
     |||||||||||||||| |||| || ||||||||||||  ||    ||||||||||||| ||||| || | ||| || | |||||||| ||| ||||| |    
T  29488808 cagtcgatacccaaacatagta-cgagtccgaccaccagttataattgccataaacaaaattggcgttttgagcattaagccaccacagagattgatatt 29488710  T
Q  492 taaccttttctacaagatctatcatagtaagttgtgtattattgaaaattctattatttctttcgtgtcaaacaatccatacacacaagagcca 585  Q
    |||||||||||| ||||||| || | |||  ||| ||||| ||||| ||||| || || | ||| |  ||||| ||||| |||||||| |||||    
T  29488709 taaccttttctaaaagatctgtcgtggtagtttgagtattcttgaatattctgttgttgcgttcattccaaactatccacacacacaatagcca 29488616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 775 - 886
Target Start/End: Original strand, 3535922 - 3536034
Alignment:
Q  775 ctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactcc--aacctgcatataataaggcatgtctctgccaactga 872  Q
    ||||||||||||||||  ||||||| || ||||||||| ||||| || | ||||||||| ||    |||| |||||| || ||||||| |||||||||||    
T  3535922 ctagtggttagaattc-actttttttaaggtgaataagtggggtgtccggggttcgaaccccggctcctgtatataacaatgcatgtccctgccaactga 3536020  T
Q  873 attatgctcacggg 886  Q
    | ||||||||||||    
T  3536021 actatgctcacggg 3536034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 766 - 811
Target Start/End: Original strand, 41181816 - 41181861
Alignment:
Q  766 tcaaggagtctagtggttagaattcgccttttttcaatgtgaataa 811  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||||    
T  41181816 tcaagtagtctagtggttagaattcgtcttttttcaacgtgaataa 41181861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 804 - 888
Target Start/End: Original strand, 6447494 - 6447581
Alignment:
Q  804 gtgaataagcggggtatctgaggttcgaactcc--aacctgcatataataaggca-tgtctctgccaactgaattatgctcacgggaa 888  Q
    ||||||||| ||||| || ||||||||||| ||    |||||||||||||| ||| |||| ||||||||||| |||||||||||||||    
T  6447494 gtgaataagtggggtgtccgaggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagttatgctcacgggaa 6447581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 765 - 868
Target Start/End: Complemental strand, 8934900 - 8934797
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc-tgcatataataaggcatgtctct 863  Q
    |||||| |||||| |||||||||||  |||||||  || ||||||||| |||||||| | || |||||| || ||| |||||||||||| |||| |||||    
T  8934900 gtcaagtagtctaatggttagaatttaccttttta-aaggtgaataagtggggtatccggggctcgaaccccgaccatgcatataataatgcatttctct 8934802  T
Q  864 gccaa 868  Q
    |||||    
T  8934801 gccaa 8934797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 839 - 886
Target Start/End: Original strand, 5932069 - 5932116
Alignment:
Q  839 cctgcatataataaggcatgtctctgccaactgaattatgctcacggg 886  Q
    |||||||||||||| |||| || ||| |||||||||||||||||||||    
T  5932069 cctgcatataataatgcatatccctgtcaactgaattatgctcacggg 5932116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 774 - 833
Target Start/End: Complemental strand, 6291105 - 6291047
Alignment:
Q  774 tctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaac 833  Q
    ||||||||||||||||| ||||||| ||||||||||||  ||||| |||| |||||||||    
T  6291105 tctagtggttagaattcaccttttt-caatgtgaataaatggggtgtctggggttcgaac 6291047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 775 - 886
Target Start/End: Original strand, 40250163 - 40250275
Alignment:
Q  775 ctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaac--ctgcatataataaggcatgtctctgccaactga 872  Q
    |||||| ||||||||| | ||||||||||| |||||||  |||| |  ||||||||||| || ||  |||||||||| || ||||||  |||||||||||    
T  40250163 ctagtgattagaattctc-ttttttcaatgagaataagtagggtgttcgaggttcgaaccccgactcctgcatataacaatgcatgttactgccaactga 40250261  T
Q  873 attatgctcacggg 886  Q
      ||||||||||||    
T  40250262 gctatgctcacggg 40250275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 6e-34; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 291 - 468
Target Start/End: Complemental strand, 26701364 - 26701186
Alignment:
Q  291 tggaatatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaagaataaacagtcactacataattacaa-aaataa 389  Q
    ||||||||||||||||||||||||| |  | | ||||||||||||||||| ||| |  |||||||||   ||||| ||||   |||||||||| ||| |     
T  26701364 tggaatatattaacaacggcgatgattcttatttagcacaaggtgtactaaagaagcaaccccaaagggcaaacaatcacagtataattacaataaacag 26701265  T
Q  390 gttagtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagcttt 468  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||  || |||||||||||||    
T  26701264 gttagtcgatacccaaacaaagtaacgggtctgaccaccatctaatcgtgccataaacaaacgtgacattgttagcttt 26701186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 776 - 886
Target Start/End: Complemental strand, 41998205 - 41998095
Alignment:
Q  776 tagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc-tgcatataataaggcatgtctctgccaactgaat 874  Q
    |||||| |||||||||||||||| ||||||||||||| ||||| |||| |||||||||||   || || ||||||||| |||||||||| |||||| | |    
T  41998205 tagtggctagaattcgccttttt-caatgtgaataagtggggtgtctgtggttcgaactcggcccttgtatataataatgcatgtctctaccaacttagt 41998107  T
Q  875 tatgctcacggg 886  Q
    ||||||||||||    
T  41998106 tatgctcacggg 41998095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 772 - 886
Target Start/End: Complemental strand, 18179440 - 18179325
Alignment:
Q  772 agtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataaggcatgtctctgccaac 869  Q
    |||||||||| |||||||| ||||||| ||| | |||||||| |||| |||| ||||||||||||    ||||||||||| || ||||||| ||||||||    
T  18179440 agtctagtggctagaattctccttttt-caaggagaataagcagggtgtctggggttcgaactccggtccctgcatataacaatgcatgtccctgccaac 18179342  T
Q  870 tgaattatgctcacggg 886  Q
    ||| |||||||||||||    
T  18179341 tgagttatgctcacggg 18179325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 765 - 886
Target Start/End: Complemental strand, 9931206 - 9931084
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctc 862  Q
    |||||| |||||||| |||||||||| |||| ||| || ||||||||| ||||| | || ||||||||||||| |   |||||||||||| ||||||| |    
T  9931206 gtcaagtagtctagtagttagaattcaccttcttt-aaggtgaataagtggggtgtttggggttcgaactccagctcttgcatataataatgcatgtccc 9931108  T
Q  863 tgccaactgaattatgctcacggg 886  Q
    ||| |||||| |||||||||||||    
T  9931107 tgctaactgagttatgctcacggg 9931084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 776 - 892
Target Start/End: Original strand, 37262093 - 37262209
Alignment:
Q  776 tagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacctgcatataataaggcatgtctctgccaactgaatt 875  Q
    |||||||||||||||  | ||||| || ||||||||| |||||||| | |||| ||||   | ||||||||||| || ||||||| |||||||||||| |    
T  37262093 tagtggttagaattcatcattttttaaggtgaataagtggggtatccggggtttgaacctgaccctgcatataacaacgcatgtccctgccaactgaact 37262192  T
Q  876 atgctcacgggaaaaaa 892  Q
    |||||||||| ||||||    
T  37262193 atgctcacggaaaaaaa 37262209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 772 - 886
Target Start/End: Original strand, 2643798 - 2643913
Alignment:
Q  772 agtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaac 869  Q
    ||||||||||||||| ||| | |||||| || ||||||||| ||||| |||| ||||| ||| || |||  |||||||||||| ||||||||||||||||    
T  2643798 agtctagtggttagagttcacatttttt-aaggtgaataagtggggtgtctggggttcaaaccccgacccatgcatataataatgcatgtctctgccaac 2643896  T
Q  870 tgaattatgctcacggg 886  Q
    | |  ||||||||||||    
T  2643897 taagctatgctcacggg 2643913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 776 - 882
Target Start/End: Original strand, 9769567 - 9769674
Alignment:
Q  776 tagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaa--cctgcatataataaggcatgtctctgccaactgaa 873  Q
    ||||||||||||||| ||||||| ||| ||||||||| ||||| || | ||||||||| ||||  ||| |||||||||| ||||||| |||||||||||     
T  9769567 tagtggttagaattcaccttttt-caaggtgaataagtggggtgtccggggttcgaaccccaatccctacatataataatgcatgtccctgccaactgag 9769665  T
Q  874 ttatgctca 882  Q
     ||||||||    
T  9769666 ctatgctca 9769674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 765 - 886
Target Start/End: Original strand, 9410304 - 9410425
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaa-ctccaacctgcatataataaggcatgtctct 863  Q
    |||||| ||| |||| |||| ||||| ||||||| |||  |||||||| ||||| ||||||||||||| ||| | |||||||||||  | |||||||  |    
T  9410304 gtcaagtagtttagtagttaaaattcaccttttt-caagatgaataagtggggtgtctgaggttcgaatctcaaccctgcatataactatgcatgtcctt 9410402  T
Q  864 gccaactgaattatgctcacggg 886  Q
    |||||||||| ||||||||||||    
T  9410403 gccaactgaactatgctcacggg 9410425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 795 - 883
Target Start/End: Complemental strand, 43020701 - 43020611
Alignment:
Q  795 tttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactgaattatgctcac 883  Q
    |||||||| |||||| || ||||| || ||||||||||| ||||||  |||||||||||| ||||||| |||||||| ||  |||||||||    
T  43020701 tttttcaaggtgaatgagtggggtgtccgaggttcgaaccccaacccctgcatataataatgcatgtccctgccaaccgagctatgctcac 43020611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 795 - 886
Target Start/End: Original strand, 9768814 - 9768907
Alignment:
Q  795 tttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactgaattatgctcacggg 886  Q
    |||||||| ||||||||| ||||| || | ||||||||| || |||  ||||||||| || ||||||| |||||||||||  ||||||||||||    
T  9768814 tttttcaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgagctatgctcacggg 9768907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 765 - 883
Target Start/End: Complemental strand, 13941438 - 13941319
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaac-tccaacc-tgcatataataaggcatgtctc 862  Q
    |||||| ||| ||||||||||||||| | |||||||||  |||||||| ||||| || || |||||||| || |||| ||||||||| || |||||||      
T  13941438 gtcaagtagtttagtggttagaattcac-ttttttcaagatgaataagtggggtgtccgaagttcgaacctcgaaccctgcatataacaatgcatgtcct 13941340  T
Q  863 tgccaactgaattatgctcac 883  Q
    ||||||||||| ||| |||||    
T  13941339 tgccaactgaactatactcac 13941319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 396 - 432
Target Start/End: Original strand, 22565648 - 22565684
Alignment:
Q  396 cgatacccaaacaaagtaacgggtccgaccaccatct 432  Q
    ||||||||||||||||||||||||| |||||||||||    
T  22565648 cgatacccaaacaaagtaacgggtctgaccaccatct 22565684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 776 - 872
Target Start/End: Complemental strand, 195152 - 195055
Alignment:
Q  776 tagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactcca--acctgcatataataaggcatgtctctgccaactga 872  Q
    ||||||||||||||| || |||||||| ||||||||| ||||| |||| ||| |||||  ||   |||||||||||| | ||||||| |||||||||||    
T  195152 tagtggttagaattcacc-tttttcaaggtgaataagtggggtgtctggggtacgaacctcagcccctgcatataattatgcatgtccctgccaactga 195055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 776 - 872
Target Start/End: Complemental strand, 5684230 - 5684133
Alignment:
Q  776 tagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactga 872  Q
    |||| |||| ||||| | |||||| || ||||||||| ||||| |||||||||| | | | ||||  |||||||||||| |||||||||||||||||||    
T  5684230 tagtagttaaaattcacttttttttaaagtgaataagtggggtgtctgaggttcaatc-ctaacccctgcatataataatgcatgtctctgccaactga 5684133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 825 - 883
Target Start/End: Original strand, 8758404 - 8758463
Alignment:
Q  825 ggttcgaactccaac-ctgcatataataaggcatgtctctgccaactgaattatgctcac 883  Q
    ||||||||| ||||| || |||||||||| | |||||||| |||||||||||||||||||    
T  8758404 ggttcgaaccccaactctacatataataatgtatgtctctaccaactgaattatgctcac 8758463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 397 - 500
Target Start/End: Complemental strand, 13868366 - 13868263
Alignment:
Q  397 gatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatacttaacc 496  Q
    |||||||||||| | ||| |||||||||||||||||   ||| || || | ||| ||||| || |||||||| | |||||||||||| ||||| |||||     
T  13868366 gatacccaaacataataaagggtccgaccaccatctttgtgtaccgtacataaaattggccttattagcttttagccaccacaaagagtgatatttaact 13868267  T
Q  497 tttt 500  Q
    ||||    
T  13868266 tttt 13868263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 774 - 886
Target Start/End: Complemental strand, 42908881 - 42908768
Alignment:
Q  774 tctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactg 871  Q
    ||||||||||||||||| ||||||| |||   ||||||| |||||||| |  |||||||| || |||  ||||||||| || ||||||| ||||||||||    
T  42908881 tctagtggttagaattctccttttt-caagaagaataagtggggtatccggagttcgaaccccgacccctgcatataacaatgcatgtccctgccaactg 42908783  T
Q  872 aattatgctcacggg 886  Q
    |  || |||||||||    
T  42908782 agctaagctcacggg 42908768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 775 - 886
Target Start/End: Original strand, 7906312 - 7906424
Alignment:
Q  775 ctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactga 872  Q
    ||||||| |||||||| | |||||| || || |||||||||||| ||   ||||||||| ||| ||  ||||||||| || ||||||| || ||||||||    
T  7906312 ctagtggctagaattcacatttttt-aaggtcaataagcggggtgtcccgggttcgaaccccagcccctgcatataacaatgcatgtccctaccaactga 7906410  T
Q  873 attatgctcacggg 886  Q
    | ||||||||||||    
T  7906411 actatgctcacggg 7906424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 17823621 - 17823667
Alignment:
Q  302 aacaacggcgatgaattctctatagcacaaggtgtactagagaggtc 348  Q
    |||||||||||||||| |||| ||||||||||||||||  |||||||    
T  17823621 aacaacggcgatgaatcctctttagcacaaggtgtactcaagaggtc 17823667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 840 - 882
Target Start/End: Original strand, 28417330 - 28417372
Alignment:
Q  840 ctgcatataataaggcatgtctctgccaactgaattatgctca 882  Q
    |||||||||| || ||||||||||||||||||| |||||||||    
T  28417330 ctgcatataagaatgcatgtctctgccaactgagttatgctca 28417372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 775 - 886
Target Start/End: Complemental strand, 41677169 - 41677057
Alignment:
Q  775 ctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacct--gcatataataaggcatgtctctgccaactga 872  Q
    ||||||| |||||||| ||||||| ||| ||||||||| ||||| || |  |||||||| || |||   ||||||||||| | |||||||||||||||||    
T  41677169 ctagtggctagaattcaccttttt-caaggtgaataagtggggtgtccggagttcgaaccccgacccccgcatataataatgaatgtctctgccaactga 41677071  T
Q  873 attatgctcacggg 886  Q
      || |||||||||    
T  41677070 gctacgctcacggg 41677057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 839 - 885
Target Start/End: Original strand, 46670895 - 46670941
Alignment:
Q  839 cctgcatataataaggcatgtctctgccaactgaattatgctcacgg 885  Q
    ||||||||||| || ||||||| |||| |||||||||||||||||||    
T  46670895 cctgcatataacaatgcatgtcactgctaactgaattatgctcacgg 46670941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 840 - 886
Target Start/End: Original strand, 51917554 - 51917600
Alignment:
Q  840 ctgcatataataaggcatgtctctgccaactgaattatgctcacggg 886  Q
    ||||||||||||| |||||||| ||||||||||  ||||||||||||    
T  51917554 ctgcatataataatgcatgtctatgccaactgagctatgctcacggg 51917600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 295 - 356
Target Start/End: Original strand, 10122377 - 10122438
Alignment:
Q  295 atatattaacaacggcgatgaattctctatagcacaaggtgtactagagaggtcaccccaaa 356  Q
    ||||||||||||||||| ||||| | || ||| ||||| ||||||  |||||||||||||||    
T  10122377 atatattaacaacggcggtgaatcccctttagtacaagatgtactcaagaggtcaccccaaa 10122438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 393 - 501
Target Start/End: Complemental strand, 3488 - 3380
Alignment:
Q  393 agtcgatacccaaacaaagtaacgggtccgaccaccatctacttgtgccataaacaaagttggcattgttagctttcatccaccacaaagaatgatactt 492  Q
    ||||||||||||||||||  |||||||||||||||||||||  ||  |||||||||||  |||  ||||| ||||||| |||||| || || ||||  ||    
T  3488 agtcgatacccaaacaaatcaacgggtccgaccaccatctatgtgaaccataaacaaaaatggtgttgtttgctttcaaccaccaaaaggagtgatgttt 3389  T
Q  493 aaccttttc 501  Q
    |||||||||    
T  3388 aaccttttc 3380  T

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Target: scaffold0119 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 765 - 886
Target Start/End: Complemental strand, 1158 - 1036
Alignment:
Q  765 gtcaaggagtctagtggttagaattcgccttttttcaatgtgaataagcggggtatctgaggttcgaactccaacc--tgcatataataaggcatgtctc 862  Q
    |||||| ||| |||||| |||||||| ||||||| ||| ||||||||| ||||| |||| ||||||||| ||| ||  | |||||||| | ||||||| |    
T  1158 gtcaagtagtttagtggctagaattcaccttttt-caaggtgaataagtggggtgtctggggttcgaaccccagcccctacatataattatgcatgtccc 1060  T
Q  863 tgccaactgaattatgctcacggg 886  Q
    | ||||||||  ||||||||||||    
T  1059 taccaactgagctatgctcacggg 1036  T

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Target: scaffold0045 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 776 - 871
Target Start/End: Original strand, 30885 - 30983
Alignment:
Q  776 tagtggttagaattcgccttttttcaatgtgaataagcggggtatct-gaggttcgaactccaacc--tgcatataataaggcatgtctctgccaactg 871  Q
    ||||| ||||||||| |||||||| || ||||||||| | ||| ||| | ||||||||||||||||  |||||||||||  ||||||| ||||||||||    
T  30885 tagtgattagaattcacctttttttaaagtgaataagtgaggtgtctagtggttcgaactccaacccctgcatataatactgcatgtccctgccaactg 30983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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