View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8901_low_133 (Length: 267)
Name: NF8901_low_133
Description: NF8901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8901_low_133 |
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Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 249
Target Start/End: Original strand, 34852354 - 34852586
Alignment:
| Q |
17 |
aatatcgagttttcagaataagtctctattaatgaatagtttatatattactccttatgaatgattttaacttaattcagacaaaaaatgatagctactt |
116 |
Q |
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| T |
34852354 |
aatatcgagttttcagaataagtctctattaatgaatagtttatatattactccttatgaatgattttaacttaattcagacaaaaaatgatagctgctt |
34852453 |
T |
|
| Q |
117 |
tcataatagaatgaccctattgaatttggcatattcccttttcaaactctttggttaagcttcatttccatcatatccttatcttcatatttatatacag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34852454 |
tcataatagaatgaccctattgaatttggcatattcccttttcaaactctttggttaagcttcatttccatcatatccttatcttcatatttatatacag |
34852553 |
T |
|
| Q |
217 |
tcaaatgcctagagtaccaaataactatgtgtg |
249 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
34852554 |
tcaaatgcctagagtaccaaataactatgtgtg |
34852586 |
T |
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