View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8901_low_140 (Length: 257)

Name: NF8901_low_140
Description: NF8901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8901_low_140
NF8901_low_140
[»] chr8 (23 HSPs)
chr8 (84-257)||(22080843-22081016)
chr8 (58-253)||(44563152-44563346)
chr8 (58-253)||(33244716-33244911)
chr8 (58-253)||(19659009-19659203)
chr8 (114-253)||(12092693-12092832)
chr8 (114-253)||(18710693-18710832)
chr8 (114-253)||(29829429-29829568)
chr8 (58-253)||(9354673-9354869)
chr8 (114-253)||(16283556-16283695)
chr8 (114-253)||(19688205-19688344)
chr8 (114-253)||(27608874-27609013)
chr8 (114-253)||(31489719-31489858)
chr8 (114-257)||(3329472-3329615)
chr8 (114-253)||(14557731-14557870)
chr8 (114-253)||(16277661-16277800)
chr8 (114-253)||(19674548-19674687)
chr8 (117-253)||(19286572-19286708)
chr8 (114-253)||(2137228-2137367)
chr8 (114-253)||(33258830-33258969)
chr8 (104-253)||(31354621-31354770)
chr8 (114-253)||(19208329-19208468)
chr8 (114-253)||(28361924-28362063)
chr8 (169-253)||(189256-189340)
[»] chr4 (25 HSPs)
chr4 (84-257)||(15391344-15391517)
chr4 (58-253)||(15227936-15228131)
chr4 (58-253)||(15284938-15285133)
chr4 (58-253)||(1900323-1900518)
chr4 (120-257)||(14235531-14235668)
chr4 (58-253)||(24460615-24460810)
chr4 (104-253)||(33673808-33673957)
chr4 (114-253)||(14763314-14763453)
chr4 (114-253)||(6569975-6570114)
chr4 (114-253)||(17014122-17014261)
chr4 (114-253)||(18800623-18800762)
chr4 (114-253)||(24592324-24592463)
chr4 (114-253)||(36344525-36344664)
chr4 (104-253)||(21969813-21969962)
chr4 (104-257)||(34188966-34189119)
chr4 (104-253)||(39850750-39850899)
chr4 (117-253)||(31126528-31126664)
chr4 (114-253)||(5005995-5006134)
chr4 (114-253)||(14665140-14665279)
chr4 (104-257)||(24112774-24112927)
chr4 (114-253)||(14098663-14098802)
chr4 (114-253)||(27163327-27163466)
chr4 (114-253)||(40105648-40105787)
chr4 (117-253)||(54833512-54833648)
chr4 (114-253)||(30753876-30754015)
[»] chr2 (42 HSPs)
chr2 (84-257)||(27393042-27393215)
chr2 (58-257)||(21703159-21703358)
chr2 (58-253)||(19456420-19456615)
chr2 (114-253)||(40233614-40233753)
chr2 (58-253)||(27118735-27118930)
chr2 (58-253)||(34303302-34303497)
chr2 (58-253)||(3784701-3784896)
chr2 (58-253)||(16163646-16163841)
chr2 (58-253)||(34157058-34157252)
chr2 (108-253)||(32049895-32050040)
chr2 (114-253)||(34279552-34279691)
chr2 (114-253)||(37375264-37375403)
chr2 (104-253)||(27803800-27803949)
chr2 (104-253)||(39051821-39051970)
chr2 (114-253)||(260752-260891)
chr2 (114-253)||(12655645-12655784)
chr2 (114-253)||(23128565-23128704)
chr2 (104-253)||(12586903-12587052)
chr2 (104-253)||(12716601-12716750)
chr2 (104-253)||(27777315-27777464)
chr2 (104-253)||(27817073-27817222)
chr2 (58-238)||(31891342-31891522)
chr2 (117-253)||(37925599-37925735)
chr2 (114-253)||(16829337-16829476)
chr2 (114-253)||(16892005-16892144)
chr2 (114-253)||(27434443-27434582)
chr2 (114-253)||(34286457-34286596)
chr2 (114-253)||(34291517-34291656)
chr2 (114-253)||(34861783-34861922)
chr2 (114-253)||(37685908-37686047)
chr2 (114-253)||(37701173-37701312)
chr2 (104-253)||(13936543-13936692)
chr2 (104-253)||(21677181-21677330)
chr2 (104-256)||(9349978-9350130)
chr2 (114-253)||(11635185-11635324)
chr2 (114-253)||(11641374-11641513)
chr2 (114-253)||(20838021-20838160)
chr2 (114-253)||(28882317-28882456)
chr2 (114-253)||(19416498-19416637)
chr2 (114-253)||(22926027-22926166)
chr2 (114-253)||(31876384-31876523)
chr2 (114-253)||(39890177-39890316)
[»] chr1 (8 HSPs)
chr1 (58-257)||(16208037-16208236)
chr1 (66-257)||(20340341-20340532)
chr1 (58-238)||(20461131-20461311)
chr1 (58-256)||(28151912-28152110)
chr1 (117-253)||(51638327-51638463)
chr1 (114-253)||(10962776-10962915)
chr1 (114-253)||(28585087-28585226)
chr1 (104-253)||(41793318-41793467)
[»] chr7 (36 HSPs)
chr7 (58-257)||(16041375-16041574)
chr7 (58-253)||(16449894-16450089)
chr7 (58-256)||(2108898-2109096)
chr7 (58-256)||(26484746-26484944)
chr7 (52-256)||(2775405-2775609)
chr7 (58-256)||(39210916-39211114)
chr7 (141-256)||(4200682-4200797)
chr7 (58-253)||(31088360-31088555)
chr7 (66-253)||(45733520-45733707)
chr7 (115-253)||(5128101-5128239)
chr7 (114-253)||(5147236-5147375)
chr7 (114-253)||(26435365-26435504)
chr7 (114-253)||(31564286-31564425)
chr7 (114-253)||(2154681-2154820)
chr7 (114-253)||(16518312-16518451)
chr7 (58-257)||(18540851-18541050)
chr7 (114-253)||(26537766-26537905)
chr7 (141-253)||(26682896-26683008)
chr7 (114-253)||(3445414-3445553)
chr7 (114-253)||(10916764-10916903)
chr7 (114-253)||(11424672-11424811)
chr7 (114-253)||(16503276-16503415)
chr7 (114-253)||(26274990-26275129)
chr7 (114-253)||(45387451-45387590)
chr7 (114-253)||(4145019-4145158)
chr7 (114-253)||(26319765-26319904)
chr7 (114-253)||(26669810-26669949)
chr7 (104-257)||(5159617-5159770)
chr7 (114-253)||(11441680-11441819)
chr7 (114-253)||(16736356-16736495)
chr7 (114-253)||(16751410-16751549)
chr7 (114-253)||(17523640-17523779)
chr7 (114-253)||(17529436-17529575)
chr7 (114-253)||(9618759-9618898)
chr7 (114-253)||(24592437-24592576)
chr7 (114-253)||(31125028-31125167)
[»] chr5 (51 HSPs)
chr5 (58-257)||(22888530-22888729)
chr5 (58-257)||(25199089-25199288)
chr5 (60-257)||(23892268-23892465)
chr5 (66-257)||(29888985-29889176)
chr5 (58-256)||(11325854-11326052)
chr5 (58-256)||(33877307-33877505)
chr5 (58-253)||(13184555-13184750)
chr5 (58-253)||(13440401-13440596)
chr5 (114-257)||(37671386-37671529)
chr5 (114-253)||(9548450-9548589)
chr5 (114-253)||(15658667-15658806)
chr5 (114-253)||(18500637-18500776)
chr5 (114-253)||(31431556-31431695)
chr5 (114-257)||(37770890-37771033)
chr5 (104-253)||(13324736-13324885)
chr5 (114-253)||(22999021-22999160)
chr5 (114-253)||(23752357-23752496)
chr5 (114-253)||(30168585-30168724)
chr5 (114-253)||(32599379-32599518)
chr5 (114-253)||(33777603-33777742)
chr5 (114-253)||(37755096-37755235)
chr5 (114-253)||(43078368-43078507)
chr5 (104-253)||(24681546-24681695)
chr5 (104-253)||(24724073-24724222)
chr5 (104-253)||(40473456-40473605)
chr5 (114-253)||(11549470-11549609)
chr5 (114-253)||(23717895-23718034)
chr5 (114-253)||(24688064-24688203)
chr5 (114-253)||(24970134-24970273)
chr5 (114-253)||(28649351-28649490)
chr5 (114-253)||(30152134-30152273)
chr5 (114-253)||(31826314-31826453)
chr5 (114-253)||(33516472-33516611)
chr5 (104-253)||(2511157-2511306)
chr5 (104-253)||(8665382-8665531)
chr5 (104-253)||(15758764-15758913)
chr5 (104-257)||(33292631-33292784)
chr5 (114-253)||(9317567-9317706)
chr5 (114-253)||(12132271-12132410)
chr5 (114-253)||(30934749-30934888)
chr5 (114-253)||(37358550-37358689)
chr5 (114-253)||(41674825-41674964)
chr5 (114-253)||(3789657-3789796)
chr5 (114-253)||(28959693-28959832)
chr5 (114-253)||(29966973-29967112)
chr5 (114-253)||(30029531-30029670)
chr5 (114-253)||(34616634-34616773)
chr5 (104-253)||(6874411-6874560)
chr5 (114-253)||(18375319-18375458)
chr5 (114-253)||(26480508-26480647)
chr5 (114-226)||(5638026-5638138)
[»] scaffold0109 (1 HSPs)
scaffold0109 (119-257)||(21673-21811)
[»] scaffold0124 (2 HSPs)
scaffold0124 (58-257)||(20439-20637)
scaffold0124 (114-253)||(30559-30698)
[»] scaffold0558 (1 HSPs)
scaffold0558 (58-256)||(35-233)
[»] scaffold0260 (1 HSPs)
scaffold0260 (66-257)||(2664-2855)
[»] chr6 (48 HSPs)
chr6 (58-257)||(27290319-27290518)
chr6 (58-253)||(22456887-22457082)
chr6 (58-256)||(14143235-14143433)
chr6 (58-256)||(26787992-26788190)
chr6 (58-256)||(27196365-27196563)
chr6 (58-256)||(27252677-27252875)
chr6 (58-239)||(22477240-22477421)
chr6 (58-256)||(13522023-13522221)
chr6 (58-253)||(33374209-33374404)
chr6 (58-253)||(28162705-28162900)
chr6 (58-253)||(8892264-8892458)
chr6 (58-253)||(8903499-8903693)
chr6 (114-257)||(4545724-4545867)
chr6 (114-253)||(27007831-27007970)
chr6 (114-257)||(4525390-4525533)
chr6 (114-253)||(4757868-4758007)
chr6 (114-253)||(4773110-4773249)
chr6 (114-253)||(22934833-22934972)
chr6 (114-253)||(23857278-23857417)
chr6 (114-253)||(27359945-27360084)
chr6 (114-253)||(27450288-27450427)
chr6 (114-253)||(29549579-29549718)
chr6 (114-253)||(34463299-34463438)
chr6 (114-253)||(3696185-3696324)
chr6 (114-257)||(4724083-4724226)
chr6 (114-253)||(16749958-16750097)
chr6 (114-253)||(26116363-26116502)
chr6 (114-253)||(26989105-26989244)
chr6 (104-253)||(17025371-17025520)
chr6 (114-253)||(13298904-13299043)
chr6 (114-253)||(16674243-16674382)
chr6 (114-253)||(24304571-24304710)
chr6 (114-253)||(24863821-24863960)
chr6 (114-253)||(26918484-26918623)
chr6 (114-253)||(30557969-30558108)
chr6 (114-253)||(27000177-27000316)
chr6 (114-253)||(28207558-28207697)
chr6 (114-253)||(29573117-29573256)
chr6 (74-232)||(20160765-20160923)
chr6 (74-232)||(22171908-22172066)
chr6 (114-253)||(15424270-15424409)
chr6 (114-253)||(16943980-16944119)
chr6 (114-253)||(26777568-26777707)
chr6 (114-253)||(27485233-27485372)
chr6 (114-253)||(29501519-29501658)
chr6 (114-226)||(27272560-27272672)
chr6 (215-253)||(17092393-17092431)
chr6 (117-253)||(27044494-27044631)
[»] chr3 (59 HSPs)
chr3 (66-253)||(18530408-18530595)
chr3 (66-253)||(16626557-16626744)
chr3 (58-256)||(31034165-31034363)
chr3 (58-256)||(32292764-32292962)
chr3 (58-253)||(4625956-4626151)
chr3 (131-253)||(5652472-5652594)
chr3 (58-253)||(17993835-17994030)
chr3 (114-253)||(7073280-7073419)
chr3 (104-253)||(11110400-11110549)
chr3 (114-253)||(4346738-4346877)
chr3 (114-257)||(6542509-6542652)
chr3 (114-253)||(22870907-22871046)
chr3 (114-253)||(22885966-22886105)
chr3 (108-253)||(28116005-28116150)
chr3 (104-253)||(29665021-29665170)
chr3 (114-253)||(4416987-4417126)
chr3 (114-253)||(8301318-8301457)
chr3 (118-253)||(15741145-15741280)
chr3 (114-253)||(18277103-18277242)
chr3 (114-253)||(18292404-18292543)
chr3 (114-253)||(18307705-18307844)
chr3 (114-253)||(18330737-18330876)
chr3 (114-253)||(22387629-22387768)
chr3 (114-253)||(29148806-29148945)
chr3 (114-253)||(48465995-48466134)
chr3 (104-253)||(20576898-20577047)
chr3 (114-253)||(5013780-5013919)
chr3 (114-253)||(8211806-8211945)
chr3 (114-253)||(8296040-8296179)
chr3 (114-229)||(10396201-10396316)
chr3 (114-253)||(21674761-21674900)
chr3 (114-253)||(36997128-36997267)
chr3 (114-253)||(47023521-47023660)
chr3 (114-253)||(51782091-51782230)
chr3 (114-256)||(5713295-5713437)
chr3 (114-256)||(5724205-5724347)
chr3 (114-256)||(5757130-5757272)
chr3 (114-256)||(5768021-5768163)
chr3 (104-257)||(32439212-32439365)
chr3 (121-253)||(6192391-6192523)
chr3 (114-253)||(51797180-51797320)
chr3 (114-253)||(4796704-4796843)
chr3 (114-253)||(5609373-5609512)
chr3 (114-253)||(7996630-7996769)
chr3 (114-253)||(10643138-10643277)
chr3 (114-253)||(15892757-15892896)
chr3 (114-253)||(24328227-24328366)
chr3 (114-253)||(28339370-28339509)
chr3 (127-257)||(20066124-20066254)
chr3 (114-253)||(5467053-5467192)
chr3 (114-253)||(5596408-5596547)
chr3 (114-253)||(18051330-18051469)
chr3 (114-253)||(18242807-18242946)
chr3 (114-253)||(31964524-31964663)
chr3 (114-253)||(50134122-50134261)
chr3 (114-253)||(17985007-17985146)
chr3 (114-253)||(18225259-18225398)
chr3 (114-253)||(28021343-28021482)
chr3 (114-253)||(35880834-35880973)
[»] scaffold0415 (2 HSPs)
scaffold0415 (104-257)||(1924-2076)
scaffold0415 (114-253)||(6119-6260)
[»] scaffold0639 (1 HSPs)
scaffold0639 (153-253)||(628-728)
[»] scaffold0336 (1 HSPs)
scaffold0336 (114-253)||(9673-9812)
[»] scaffold0089 (3 HSPs)
scaffold0089 (114-253)||(46995-47134)
scaffold0089 (114-253)||(29870-30009)
scaffold0089 (114-253)||(40079-40218)
[»] scaffold0159 (2 HSPs)
scaffold0159 (114-253)||(9076-9215)
scaffold0159 (114-253)||(20122-20261)
[»] scaffold0350 (1 HSPs)
scaffold0350 (114-253)||(7249-7388)
[»] scaffold0143 (1 HSPs)
scaffold0143 (114-253)||(27399-27538)
[»] scaffold0038 (1 HSPs)
scaffold0038 (114-253)||(8056-8195)
[»] scaffold0029 (1 HSPs)
scaffold0029 (108-253)||(139-284)
[»] scaffold0144 (1 HSPs)
scaffold0144 (114-253)||(26211-26351)
[»] scaffold0237 (1 HSPs)
scaffold0237 (114-253)||(14940-15079)


Alignment Details
Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 84 - 257
Target Start/End: Complemental strand, 22081016 - 22080843
Alignment:
Q  84 tgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatg 183  Q
    |||||| |||||||| ||| ||||||||   | ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22081016 tgcacaaccaggcagggaaagcctccacctaacccgttgcctcccaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatg 22080917  T
Q  184 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22080916 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 22080843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 44563152 - 44563346
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  44563152 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 44563251  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| |||||||| |||||||||||    
T  44563252 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaa-aaactcatagaccaaggaaagttgacttttgagaa 44563346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 33244716 - 33244911
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  || |||| |||| | | ||||||||| ||||||||||| |||||    
T  33244716 tcccgactctacttctcaaagggcgctgcacaaccagacagggcaagcctccacctgacccgtcgcctcctaagttccgttcggacctcaagtgtgattt 33244815  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||||| ||||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  33244816 ccatcaaggtgcgctgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 33244911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 19659203 - 19659009
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  || |||| |||| | | ||||||||| ||||||||||| |||||    
T  19659203 tcccgactctacttctcaaagggcgctgcacaaccagacagggcaagcctccacctgacccgtcgcctcccaagttccgttcggacctcaagtgtgattt 19659104  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  19659103 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaa-aaactcatagaccaaggaaaattgacctttgagaa 19659009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 12092832 - 12092693
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||| | || |||||||| || || ||||| ||||||||||| || |    
T  12092832 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgctttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 12092733  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  12092732 tgaagaagctcattgatcagggaaagctgacttttgagaa 12092693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 18710693 - 18710832
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||| ||||| |||||||| | ||||| |||||||| ||||| ||||| ||||| || || |||||||| || |||||||| ||||||||||| || |    
T  18710693 gatccgctgcctccaaggttcaggtctgatctcaagtgtgattttcatcagggtgccctaggtcatgatgtcgagggatgttatgctttgaagtatatcg 18710792  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  18710793 tgaagaagctcattgatcaaggaaagctgacttttgagaa 18710832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 29829429 - 29829568
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  29829429 gatccgttgcctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 29829528  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  29829529 tgaagaagctcattgatcagggaaagctgacttttgagaa 29829568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 9354673 - 9354869
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||  ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  9354673 tcccgactctactcctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 9354772  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgt-aaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| ||||| || |||||||| ||||| |||| ||||||||| ||| || ||||| ||||| ||||| || || ||||||||    
T  9354773 ccatcaaggtgctatgggtcatgacgtcgaaggatgctacgcgttgaggtacattgtaaaaaaaactcatagaccaaggaaaattgacctttgagaa 9354869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 16283556 - 16283695
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| | |||||| | || |||||||| || ||||||||||||||  | ||||| |||||||| ||||| || || ||||||||||| || |    
T  16283556 gatccgttgcctcccaggttcaggtccgacctcaaatgtgatttccatcaaggcaccctgggtcatgatgtcgaagggtgctatgctttgaagtatatcg 16283655  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  16283656 tgaagaagctcattgatcaaggaaagctgacttttgagaa 16283695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 19688205 - 19688344
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| ||||||||||| ||||| |||||||| || || || || ||||||||||| || |    
T  19688205 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggtgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 19688304  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | || ||||||||||| || |||||||| |||||||||||    
T  19688305 tgaaaaagctcattgatcaaggaaagttgacttttgagaa 19688344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 27609013 - 27608874
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || ||||| || ||||||||||| || |    
T  27609013 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgagggatgctatgctttgaagtatatcg 27608914  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  27608913 tgaagaagctcattgatcaaggaaagctgacttttgagaa 27608874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 31489858 - 31489719
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| |||||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  31489858 gatccgttgcctccaaggttcaggtctgatctcaaatgcgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 31489759  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  31489758 tgaagaagctcattgatcaagggaagctgacttttgagaa 31489719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 3329615 - 3329472
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||| | || |||||||| || || ||||| ||||||||||| || |    
T  3329615 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgctttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 3329516  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    | ||||||||| |||| || || ||| | |||||||||||||||    
T  3329515 tgaagaagctcgttgatcaagggaagctgacttttgagaacaat 3329472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 14557731 - 14557870
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  14557731 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 14557830  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  14557831 tgaagaagctcattgatcaaggaaagctgacttttgagaa 14557870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 16277661 - 16277800
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| | |||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || |||||||||||||| || |    
T  16277661 gatccgttgcctcccaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctacgctttgaagtatatcg 16277760  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  16277761 tgaagaagctcattgatcaaggaaagctgacttttgagaa 16277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 19674548 - 19674687
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||| |||||  | || |||||||| ||  | ||||| ||||||||||| ||||    
T  19674548 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggtcatgatgtcgagaggtgttatgctttgaagtatattg 19674647  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  19674648 tgaagaagctcattgatcaagggaagctgacttttgagaa 19674687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 253
Target Start/End: Original strand, 19286572 - 19286708
Alignment:
Q  117 ccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaa 216  Q
    ||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || || |    
T  19286572 ccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcgtga 19286671  T
Q  217 agaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||| |||||||| || || ||| | |||||||||||    
T  19286672 agaaactcattgatcaagggaagctgacttttgagaa 19286708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 2137367 - 2137228
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| ||  |||| |||||||| || || || || ||||||||||| || |    
T  2137367 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccttgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 2137268  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | || ||||||||||| || |||||| | |||||||||||    
T  2137267 tgaaaaagctcattgatcaaggaaagctgacttttgagaa 2137228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 33258830 - 33258969
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  |||| ||||| || || || ||||| ||||||||||| || |    
T  33258830 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttgggtcatgacgtcgaggggtgttatgctttgaagtatatcg 33258929  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  33258930 tgaagaagctcatcgatcaagggaagctgacttttgagaa 33258969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 253
Target Start/End: Original strand, 31354621 - 31354770
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    ||||||||  ||||| |||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || ||||| || || || ||||| ||||||    
T  31354621 gcctccacctgatcctttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttg 31354720  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || ||||||||||| || || || ||| | |||||||||||    
T  31354721 aagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 31354770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 19208468 - 19208329
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  19208468 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 19208369  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  19208368 tgaagaagctcatcgatcaagggaagctgacttttgagaa 19208329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 28362063 - 28361924
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  28362063 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 28361964  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  28361963 tgaagaagctcatcgatcaagggaagctgacttttgagaa 28361924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 189256 - 189340
Alignment:
Q  169 ctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||| |||||||| || || || |||||||||||||| || || || ||||| ||||| || |||||| | |||||||||||    
T  189256 ctctgggtcatgatgtcgaggggtgctacgctttgaagtatatcgtgaaaaagcttattgatcaaggaaagctgacttttgagaa 189340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 84 - 257
Target Start/End: Complemental strand, 15391517 - 15391344
Alignment:
Q  84 tgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatg 183  Q
    |||||| |||||||| | | ||||||||   | ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15391517 tgcacaaccaggcaggggaagcctccacctaacccgttgcctcccaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatg 15391418  T
Q  184 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15391417 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgactagggaaagttaacttttgagaacaat 15391344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 15227936 - 15228131
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  || ||| |||| ||| | | ||||||||  ||||| |||||| | ||||||||||||||||||||||| |||||    
T  15227936 tcccgactctacttctcagagggcactgtacaaccagacagggtaagcctccacctgatccattgcctcccaggttccgttctgacctcaagtgtgattt 15228035  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||||||||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  15228036 ccatcaaggtgctctgggtcacgatgttgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcagggaaagttaacctttgagaa 15228131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 15285133 - 15284938
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  |||||| |||| ||| | | ||||||||  |||||||||||| | |||||||| |||||||||||||| |||||    
T  15285133 tcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccggtctgacctcaagtgtgattt 15285034  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||| || || ||||||||    
T  15285033 ccatcaaggtgctctgggtcatgatgttgaaggatgctacgctttgaagtacattgtaaaaaagctcatagaccaaggaaaattgacctttgagaa 15284938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 1900323 - 1900518
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  |||||| |||| ||  | | ||||||||  |||||||||| |   ||||| ||||||||||||||||| |||||    
T  1900323 tcccgactctacttctcagagggcactgcacaaccagacatggtaagcctccacctgatccgttgcttctcaggtttcgttctgacctcaagtgtgattt 1900422  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  1900423 ccatcaaggtgctctgggtcatgatgttgaaggatgctacactttgaagtacattgtgaagaagctcattgatcaaggaaagttaacttttgagaa 1900518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 120 - 257
Target Start/End: Complemental strand, 14235668 - 14235531
Alignment:
Q  120 ttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaaga 219  Q
    |||||| | ||||||| ||  |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  14235668 ttgcctcccaggttccatttcgacctcaaatgtgatttccatcaaggtgctctgggccatgatgttgagggatgttacgctttgaagttcattgtaaaga 14235569  T
Q  220 agctcattgaccagggaaagttaacttttgagaacaat 257  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  14235568 agctcatagaccagggaaagttaacttttgagaacaat 14235531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 24460810 - 24460615
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  24460810 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 24460711  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  24460710 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 24460615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 33673957 - 33673808
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| ||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  33673957 gcctccaccggacccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttg 33673858  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  33673857 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 33673808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 14763453 - 14763314
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  14763453 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 14763354  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  14763353 tgaagaagctcattgatcagggaaagctgacttttgagaa 14763314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 6569975 - 6570114
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||| | || |||||||| || || ||||| ||||||||||| || |    
T  6569975 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgctttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 6570074  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  6570075 tgaagaagctcattgatcaagggaagctgacttttgagaa 6570114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 17014122 - 17014261
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| | |||||| | || |||||||| || ||||| |||||||| || ||||| |||||||| || || || |||||||||||||| || |    
T  17014122 gatccgttgcctcccaggttcaggtccgacctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctacgctttgaagtatatcg 17014221  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  17014222 tgaagaagctcattgatcaaggaaagctgacttttgagaa 17014261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 18800762 - 18800623
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| |||||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  18800762 gatccgttgcctccaaggttcaggtctgatctcaaatgcgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 18800663  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  18800662 tgaagaagctcattgatcaagggaagctgacttttgagaa 18800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 24592463 - 24592324
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || |||||||||||||| || |    
T  24592463 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctacgctttgaagtatatcg 24592364  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  24592363 tgaagaagctcattgatcaaggaaagctgacttttgagaa 24592324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 36344664 - 36344525
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| | |||||| | ||||| ||||| || ||||| ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  36344664 gatccgttgcctccgaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 36344565  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||| |||| ||||||||| | |||||||||||    
T  36344564 tgaagaagctcgttgatcagggaaagctgacttttgagaa 36344525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 253
Target Start/End: Original strand, 21969813 - 21969962
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  21969813 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttg 21969912  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  21969913 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 21969962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 34189119 - 34188966
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || ||||| || ||||||||||||||| | || ||||||||||| || || || ||| |     
T  34189119 gcctccaccggaccctttacctccaaggttccgctctgatcttaagtgtgacttccatcaaggtgctttagggcatgatgttgaggggtgctatgctcta 34189020  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||| || |||||||| || || || || |||||||||||||||||||||    
T  34189019 aagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 34188966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 253
Target Start/End: Original strand, 39850750 - 39850899
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||| | || |||||||| || || ||||| ||||||    
T  39850750 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgctttaggtcatgatgtcgaggggtgttatgctttg 39850849  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || ||||||||| |||| ||||||||| | |||||||||||    
T  39850850 aagtatatcgtgaagaagctcgttgatcagggaaagctgacttttgagaa 39850899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 253
Target Start/End: Complemental strand, 31126664 - 31126528
Alignment:
Q  117 ccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaa 216  Q
    ||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || || |    
T  31126664 ccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcgtga 31126565  T
Q  217 agaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| ||||||||| | |||||||||||    
T  31126564 agaagctcattgatcagggaaagctgacttttgagaa 31126528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 5005995 - 5006134
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  5005995 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 5006094  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||||| |||||||||||    
T  5006095 tgaagaagctcatcgatcaagggaagttgacttttgagaa 5006134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 14665140 - 14665279
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  14665140 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 14665239  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  14665240 tgaagaagctcattgatcaaggaaagctgacttttgagaa 14665279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 24112774 - 24112927
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || ||||| || ||||||||||| ||| | || ||||||||||| || || || ||| |     
T  24112774 gcctccaccggaccctttacctccaaggttccgctctgatcttaagtgtgacttccatcaaggcgctttagggcatgatgttgaggggtgctatgctcta 24112873  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||| || |||||||| || || || || |||||||||||||||||||||    
T  24112874 aagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 24112927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 14098663 - 14098802
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| |  |||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  14098663 gatccgttgcctccaaggttcaggactgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 14098762  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  14098763 tgaagaagctcattgatcaagggaagctgacttttgagaa 14098802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 27163466 - 27163327
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| |||||||| || || |    
T  27163466 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaaatatatcg 27163367  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  27163366 tgaagaaactcattgatcaagggaagctgacttttgagaa 27163327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 40105787 - 40105648
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  40105787 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 40105688  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  40105687 tgaagaagctcatcgatcaagggaagctgacttttgagaa 40105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 253
Target Start/End: Original strand, 54833512 - 54833648
Alignment:
Q  117 ccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaa 216  Q
    ||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || || |    
T  54833512 ccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcgtga 54833611  T
Q  217 agaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||| |||||||| || || ||| | |||||||||||    
T  54833612 agaaactcattgatcaagggaagctgacttttgagaa 54833648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 30753876 - 30754015
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  30753876 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 30753975  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  30753976 tgaagaaactcattgatcaagggaagctgacttttgagaa 30754015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 4e-65; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 84 - 257
Target Start/End: Original strand, 27393042 - 27393215
Alignment:
Q  84 tgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatg 183  Q
    |||||| |||||||| | | ||||||||   | ||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27393042 tgcacaaccaggcagggcaagcctccacctaacccgttgcctcccaggttccattctgacctcaagtgcgatttccatcaaggtgctctgggccatgatg 27393141  T
Q  184 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27393142 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaagttaacttttgagaacaat 27393215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 58 - 257
Target Start/End: Complemental strand, 21703358 - 21703159
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  |||||| |||| |||   | ||||||||  |||||||||||| | ||||||||||||||||||||||| |||||    
T  21703358 tcccgactctacttctcagagggcactgcacaaccagacaggacaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgattt 21703259  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||||||||||| ||||||||  ||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  21703258 ccatcaaggtgctctgggtcatgatgtcaaaggatgctacgctttgaagtacattgtgaagaagctcattgatcagggaaagttaacttttgagaacaat 21703159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 19456615 - 19456420
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  |||||||||||| | ||||||||||||||||||||||| |||||    
T  19456615 tcccgactctacttctcatagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgattt 19456516  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||| ||||| || || ||||||||    
T  19456515 ccatcaaggtgctctgggtcatgatgttgaagaatgctacgctttgaagtacattgtaaaaaagctcatagaccaaggaaaattgacctttgagaa 19456420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 40233614 - 40233753
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| || |    
T  40233614 gatccgttgcctccaaggttccggtctgacctcaaatgtgatttccatcaaggtgctctgggtcatgatgtcgaaggatgttatgctttgaagtatatcg 40233713  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  40233714 tgaagaagctcattgatcaagggaagctgacttttgagaa 40233753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 27118735 - 27118930
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||||| |||| | | ||||||||| ||||||||||| |||||    
T  27118735 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccgtcgcctcccaagttccgttcggacctcaagtgtgattt 27118834  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||||||||||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  27118835 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 27118930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 34303497 - 34303302
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||||| |||| | | ||||||||| ||||||||||| |||||    
T  34303497 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccgtcgcctcccaagttccgttcggacctcaagtgtgattt 34303398  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  34303397 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 34303302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 3784701 - 3784896
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  3784701 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 3784800  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  3784801 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 3784896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 16163646 - 16163841
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  16163646 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 16163745  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||  |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  16163746 ccatcaaggtgctatgggtcatgatggcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 16163841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 34157058 - 34157252
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  34157058 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 34157157  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  34157158 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaa-aaactcatagaccaaggaaaattgacctttgagaa 34157252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 253
Target Start/End: Original strand, 32049895 - 32050040
Alignment:
Q  108 ccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagt 207  Q
    |||| ||| ||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| ||||||||||    
T  32049895 ccaccggacccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagt 32049994  T
Q  208 acattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | || || |||||||||||||| ||||||||| | |||||||||||    
T  32049995 atatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 32050040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 34279552 - 34279691
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  34279552 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 34279651  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  34279652 tgaagaagctcattgatcaaggaaagctgacttttgagaa 34279691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 37375264 - 37375403
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  37375264 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 37375363  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||| |||| ||||||||| | |||||||||||    
T  37375364 tgaagaagctcgttgatcagggaaagctgacttttgagaa 37375403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 253
Target Start/End: Original strand, 27803800 - 27803949
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | ||||||||||| || || ||||| ||||||    
T  27803800 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggccatgatgtcgaggggtgttatgctttg 27803899  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  27803900 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 27803949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 39051970 - 39051821
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | ||||||||||| || || ||||| ||||||    
T  39051970 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggccatgatgtcgaggggtgttatgctttg 39051871  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  39051870 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 39051821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 260891 - 260752
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||| ||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  260891 gatctgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 260792  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  260791 tgaagaagctcattgatcagggaaagctgacttttgagaa 260752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 12655645 - 12655784
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || |||||||||||||| || |    
T  12655645 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctacgctttgaagtatatcg 12655744  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  12655745 tgaagaagctcattgatcaaggaaagctgacttttgagaa 12655784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 23128704 - 23128565
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| ||||||||||| ||||| |||||||| || || || || ||||||||||| || |    
T  23128704 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggtgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 23128605  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  23128604 tgaagaagctcattgatcaaggaaagctgacttttgagaa 23128565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 253
Target Start/End: Original strand, 12586903 - 12587052
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| ||||||||||| ||||||    
T  12586903 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaaggatgttatgctttg 12587002  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| || || ||| | |||||||||||    
T  12587003 aagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 12587052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 12716750 - 12716601
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  12716750 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttg 12716651  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  12716650 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 12716601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 253
Target Start/End: Original strand, 27777315 - 27777464
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  27777315 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttg 27777414  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  27777415 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 27777464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 253
Target Start/End: Original strand, 27817073 - 27817222
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  27817073 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttg 27817172  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  27817173 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 27817222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 31891522 - 31891342
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  |||||||||||| |||||||| | || || ||||| || |||||    
T  31891522 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattt 31891423  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaa 238  Q
     |||||||| || ||||| |||||||| || || || ||||| |||| |||||||||||| || ||||| ||||| |||||    
T  31891422 tcatcaaggcgccctgggtcatgatgtcgaggggtgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaa 31891342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 253
Target Start/End: Original strand, 37925599 - 37925735
Alignment:
Q  117 ccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaa 216  Q
    ||||||||| |||||||| | ||||| ||||| ||||| |||||||||||||| || || |||||||| || || ||||| ||||||||||| || || |    
T  37925599 ccgttgcctccaaggttcaggtctgatctcaaatgcgacttccatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcgtga 37925698  T
Q  217 agaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||| || || || ||| | |||||||||||    
T  37925699 agaagctcatcgatcaagggaagctgacttttgagaa 37925735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 16829476 - 16829337
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| || || || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  16829476 gatccgttgcctccaaggttcaggtctgatcttaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 16829377  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  16829376 tgaagaagctcattgatcagggaaagctgacttttgagaa 16829337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 16892005 - 16892144
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| || || || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  16892005 gatccgttgcctccaaggttcaggtctgatcttaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 16892104  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  16892105 tgaagaagctcattgatcagggaaagctgacttttgagaa 16892144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 27434582 - 27434443
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| | | |||| | || |||||||| || |||||||||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  27434582 gatccgttgcctcccaagttcaggtccgacctcaaatgtgatttccatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 27434483  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  27434482 tgaagaagctcattgatcaaggaaagctgacttttgagaa 27434443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 34286457 - 34286596
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||||| || || || ||||| || || ||||| ||||||||||| || |    
T  34286457 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcacgatgtcgaggggtgttatgctttgaagtatatcg 34286556  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | ||||| |||||    
T  34286557 tgaagaagctcattgatcaaggaaagctgactttcgagaa 34286596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 34291517 - 34291656
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||||| || || || ||||| || || ||||| ||||||||||| || |    
T  34291517 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcacgatgtcgaggggtgttatgctttgaagtatatcg 34291616  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | ||||| |||||    
T  34291617 tgaagaagctcattgatcaaggaaagctgactttcgagaa 34291656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 34861783 - 34861922
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  34861783 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 34861882  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  34861883 tgaagaagctcatcgatcaagggaagctgacttttgagaa 34861922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 37686047 - 37685908
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  37686047 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 37685948  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  37685947 tgaagaagctcatcgatcaagggaagctgacttttgagaa 37685908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 37701312 - 37701173
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  37701312 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 37701213  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  37701212 tgaagaagctcatcgatcaagggaagctgacttttgagaa 37701173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 13936692 - 13936543
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  13936692 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttg 13936593  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||| || |||||||||||||| || || ||| | |||||||||||    
T  13936592 aagtacatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 13936543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 21677330 - 21677181
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    ||||||||  |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || || ||||| ||||||    
T  21677330 gcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttg 21677231  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || ||||||||||| || || || ||| | |||||||||||    
T  21677230 aagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 21677181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 256
Target Start/End: Complemental strand, 9350130 - 9349978
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  9350130 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttg 9350031  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    ||||| || || |||||||||||||| || || ||| | ||||||||||||||    
T  9350030 aagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaacaa 9349978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 11635324 - 11635185
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||| |||||  | || ||||||||||| || ||||| |||||||||||||| |    
T  11635324 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggtcatgatgttgaggggtgttatgctttgaagtacatcg 11635225  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||  |||| || || ||| | |||||||||||    
T  11635224 tgaagaagcttgttgatcaagggaagctgacttttgagaa 11635185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 11641513 - 11641374
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||| |||||  | || ||||||||||| || ||||| |||||||||||||| |    
T  11641513 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggtcatgatgttgaggggtgttatgctttgaagtacatcg 11641414  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||  |||| || || ||| | |||||||||||    
T  11641413 tgaagaagcttgttgatcaagggaagctgacttttgagaa 11641374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 20838021 - 20838160
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||| ||||||| | |||||| | || ||||| || || |||||||||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  20838021 gatctgttgcctcccaggttcaggtccgaccttaaatgtgatttccatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 20838120  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  20838121 tgaagaagctcattgatcaaggaaagctgacttttgagaa 20838160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 28882317 - 28882456
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| | |||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  28882317 gatccgttgcctcccaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 28882416  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  28882417 tgaagaagctcattgatcaaggaaagctgacttttgagaa 28882456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 19416637 - 19416498
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| |||||||| || || |    
T  19416637 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaaatatatcg 19416538  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| ||||| || || || ||| | |||||||||||    
T  19416537 tgaagaaactcatcgatcaagggaagctgacttttgagaa 19416498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 22926166 - 22926027
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  22926166 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 22926067  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  22926066 tgaagaagctcatcgatcaagggaagctgacttttgagaa 22926027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 31876384 - 31876523
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  |||| ||||| || || || ||||| ||||||||||| || |    
T  31876384 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttgggtcatgacgtcgaggggtgttatgctttgaagtatatcg 31876483  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  31876484 tgaagaagctcatcgatcaagggaagctgacttttgagaa 31876523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 39890177 - 39890316
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| |  |||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||| ||||||| || |    
T  39890177 gatccgttgcctccaaggttcagggctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctctgaagtatatcg 39890276  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  39890277 tgaagaaactcattgatcaagggaagctgacttttgagaa 39890316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 58 - 257
Target Start/End: Complemental strand, 16208236 - 16208037
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  |||||| |||| ||| |||  |||||||  |||||||||||| | ||||||||||||||||||||||| |||||    
T  16208236 tcccgactctacttctcagagggcactgcacaaccagacagggaaaacctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgattt 16208137  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  16208136 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcaaggaaagttaacttttgagaacaat 16208037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 20340532 - 20340341
Alignment:
Q  66 ctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaag 165  Q
    |||||| |||||||||  | |||| |||| ||| | | ||||||||  |||||||| ||| | ||||||||||||||||||||||| |||||||||||||    
T  20340532 ctacttctcagagggcactacacaaccagacagggcaagcctccacctgatccgttacctcctaggttccgttctgacctcaagtgtgatttccatcaag 20340433  T
Q  166 gtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||    
T  20340432 gtgctctgggtcatgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattaaccaaggaaagttaacttttgagaacaat 20340341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 238
Target Start/End: Original strand, 20461131 - 20461311
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  |||||| |||| ||| | | ||||||||  |||||||||||| | ||||||||||||||||||||||| |||||    
T  20461131 tcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgattt 20461230  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaa 238  Q
     |||||||||||||| || |||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| |||||    
T  20461231 tcatcaaggtgctctaggtcatgatgtcgaaggatgctacgctttgaagtacattgtaaaaaagctcatagaccaaggaaa 20461311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 256
Target Start/End: Original strand, 28151912 - 28152110
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  ||||||  ||| ||| | | ||||||||  |||| ||| ||| | ||| |||| ||||||||||| || |||||    
T  28151912 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccacctgatctgttacctcccaggctccggtctgacctcaaatgtgattt 28152011  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  28152012 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 28152110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 253
Target Start/End: Original strand, 51638327 - 51638463
Alignment:
Q  117 ccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaa 216  Q
    ||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| ||||| |    
T  51638327 ccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatattgtga 51638426  T
Q  217 agaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| || || ||| | |||||||||||    
T  51638427 agaagctcattgatcaagggaagctgacttttgagaa 51638463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 10962776 - 10962915
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| ||||| |||||||| || || ||||| ||||||||||| || |    
T  10962776 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctgggtcatgatgtcgaggggtgttatgctttgaagtatatcg 10962875  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  10962876 tgaagaagctcatcgatcaagggaagctgacttttgagaa 10962915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 28585087 - 28585226
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || |||||||||||  |||| ||||| || || || ||||| ||||||||||| || |    
T  28585087 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccttgggtcatgacgtcgaggggtgttatgctttgaagtatatcg 28585186  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  28585187 tgaagaagctcatcgatcaagggaagctgacttttgagaa 28585226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 41793467 - 41793318
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    ||||||||  |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || ||||| || || || ||||| ||||||    
T  41793467 gcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttg 41793368  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || ||||||||| | || || || ||| | |||||||||||    
T  41793367 aagtatatcgtgaagaagctcgtcgatcaagggaagctgacttttgagaa 41793318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 58 - 257
Target Start/End: Original strand, 16041375 - 16041574
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  |||||| |||| ||| | | ||||||||  |||||||||||| | ||||||||||||||||| ||||| |||||    
T  16041375 tcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctaaagtgtgattt 16041474  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||    
T  16041475 ccatcaaggtgctctgggtcatgatgtagaaggatgctacgctttgaagtacattgtgaaaaagctcattgatcagggaaagttaacttttgagaacaat 16041574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 16450089 - 16449894
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  |||||| |||| ||| | | ||||||||  ||||| |||||| | ||||| ||||||||||||||||| |||||    
T  16450089 tcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatcctttgcctcccaggtttcgttctgacctcaagtgtgattt 16449990  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  16449989 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcagggaaagttaacttttgagaa 16449894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 58 - 256
Target Start/End: Complemental strand, 2109096 - 2108898
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  ||||||  ||| ||| | | ||||||||  |||||||| ||| | |||||||| ||||||||||| || |||||    
T  2109096 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 2108997  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  2108996 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 2108898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 58 - 256
Target Start/End: Original strand, 26484746 - 26484944
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  ||||||  ||| ||| | | ||||||||  |||||||| ||| | |||||||| ||||||||||| || |||||    
T  26484746 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 26484845  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  26484846 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 26484944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 256
Target Start/End: Original strand, 2775405 - 2775609
Alignment:
Q  52 agtagatcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtg 151  Q
    ||||| ||||||| |||||| |||||||||  ||||||  ||| ||| | | ||||||||  |||||||| ||| | |||||||| ||||||||||| ||    
T  2775405 agtagctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatg 2775504  T
Q  152 cgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgag 251  Q
     ||||||||||||||||||||||| |||||||| |||||||| || ||||||||  ||||||| |||||||||||| |||| |||||||| |||||||||    
T  2775505 tgatttccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaacacattgtgaagaagctcattaaccaaggaaagttgacttttgag 2775604  T
Q  252 aacaa 256  Q
    |||||    
T  2775605 aacaa 2775609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 256
Target Start/End: Complemental strand, 39211114 - 39210916
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  ||||||  ||| ||| | | || |||||  |||||||| ||| | |||||||| ||||||||||| || |||||    
T  39211114 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcttccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 39211015  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    ||||||||||||| |||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  39211014 ccatcaaggtgctttgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 39210916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 256
Target Start/End: Original strand, 4200682 - 4200797
Alignment:
Q  141 gacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagt 240  Q
    |||||||| || ||||||||||||||||||||||| |||||||| |||||||| || ||||||||  ||||||| |||||||||||| |||| |||||||    
T  4200682 gacctcaaatgtgatttccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaacacattgtgaagaagctcattaaccaaggaaagt 4200781  T
Q  241 taacttttgagaacaa 256  Q
    | ||||||||||||||    
T  4200782 tgacttttgagaacaa 4200797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 31088555 - 31088360
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  31088555 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 31088456  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  31088455 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 31088360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 45733520 - 45733707
Alignment:
Q  66 ctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaag 165  Q
    |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||||||||||    
T  45733520 ctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatcaag 45733619  T
Q  166 gtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  45733620 gtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 45733707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 253
Target Start/End: Original strand, 5128101 - 5128239
Alignment:
Q  115 atccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgt 214  Q
    ||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||||| || || |||||||| || ||||| |||||||||||||| || ||    
T  5128101 atccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgagggatgctacgctttgaagtatatcgt 5128200  T
Q  215 aaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
     |||||||||||||| || |||||| | |||||||||||    
T  5128201 gaagaagctcattgatcaaggaaagctgacttttgagaa 5128239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 5147375 - 5147236
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  5147375 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 5147276  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  5147275 tgaagaagctcattgatcagggaaagctgacttttgagaa 5147236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 26435365 - 26435504
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  26435365 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 26435464  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  26435465 tgaagaagctcattgatcagggaaagctgacttttgagaa 26435504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 31564425 - 31564286
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||| | || |||||||| || || ||||| ||||||||||| || |    
T  31564425 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgctttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 31564326  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  31564325 tgaagaagctcattgatcagggaaagctgacttttgagaa 31564286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 2154681 - 2154820
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || || || |||||||| || ||||| |||||||||||||| || |    
T  2154681 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctaggtcatgatgtcgagggatgctacgctttgaagtatatcg 2154780  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  2154781 tgaagaagctcattgatcaaggaaagctgacttttgagaa 2154820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 16518451 - 16518312
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || |||||||||||||| || ||||| |||||||| || || || || | ||||||||| || |    
T  16518451 gatccgttgcctccaaggttcaggtccgatctcaaatgtgatttccatcaaggcgccctgggtcatgatgtcgaggggtgctatgttttgaagtatatcg 16518352  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||||| |||||||||||    
T  16518351 tgaagaagctcattgatcaaggaaagttgacttttgagaa 16518312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 257
Target Start/End: Original strand, 18540851 - 18541050
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  ||||||  ||| ||| | | |||||||| ||| || || ||| |||||||||| ||||| || ||||| || ||    
T  18540851 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccaccggaccctttacctccaaggttccgctctgatcttaagtgtgactt 18540950  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    ||||||||| ||| | || ||||||||||| || || || ||| | |||||||| || |||||||| || || || || |||||||||||||||||||||    
T  18540951 ccatcaaggcgctttagggcatgatgttgaggggtgctatgctctaaagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 18541050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 26537905 - 26537766
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| |||||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  26537905 gatccgttgcctccaaggttcaggtctgatctcaaatgcgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 26537806  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  26537805 tgaagaagctcattgatcaagggaagctgacttttgagaa 26537766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 26683008 - 26682896
Alignment:
Q  141 gacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagt 240  Q
    |||||||| || ||||||||||||||||||||||| |||||||| |||||||| || ||||||||  ||||| |||| || ||||| ||||| ||||| |    
T  26683008 gacctcaaatgtgatttccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaacacattttaaaaaaactcatagaccaaggaaaat 26682909  T
Q  241 taacttttgagaa 253  Q
    | || ||||||||    
T  26682908 tgacctttgagaa 26682896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 3445414 - 3445553
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| ||||    
T  3445414 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatattg 3445513  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  3445514 tgaagaagctcattgatcaagggaagctgacttttgagaa 3445553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 10916903 - 10916764
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  10916903 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 10916804  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  10916803 tgaagaagctcattgatcaaggaaagctgacttttgagaa 10916764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 11424811 - 11424672
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  11424811 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 11424712  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  11424711 tgaagaagctcattgatcaaggaaagctgacttttgagaa 11424672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 16503415 - 16503276
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || |||||||||||||| || ||||| |||||||| || || || || | ||||||||| || |    
T  16503415 gatccgttgcctccaaggttcaggtccgatctcaaatgtgatttccatcaaggcgccctgggtcatgatgtcgaggggtgctatgttttgaagtatatcg 16503316  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  16503315 tgaagaagctcattgatcaaggaaagctgacttttgagaa 16503276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 26275129 - 26274990
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || |||||||| ||||||||||| || |    
T  26275129 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgagggatgttatgctttgaagtatatcg 26275030  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  26275029 tgaagaagctcatcgatcaagggaagctgacttttgagaa 26274990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 45387451 - 45387590
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  45387451 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 45387550  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  45387551 tgaagaagctcatcgatcaagggaagctgacttttgagaa 45387590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 4145158 - 4145019
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  4145158 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 4145059  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  4145058 tgaagaagctcatcgatcaagggaagctgacttttgagaa 4145019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 26319904 - 26319765
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  26319904 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 26319805  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  26319804 tgaagaagctcatcgatcaagggaagctgacttttgagaa 26319765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 26669949 - 26669810
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||  |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  26669949 gatccgttgcccccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 26669850  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  26669849 tgaagaagctcatcgatcaagggaagctgacttttgagaa 26669810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 5159617 - 5159770
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || ||||| || ||||||||||| ||| | || ||||||||| | || || || ||| |     
T  5159617 gcctccaccggaccctttacctccaaggttccgctctgatcttaagtgtgacttccatcaaggcgctttagggcatgatgttaaggggtgctatgctcta 5159716  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||| || |||||||| || || || || |||||||||||||||||||||    
T  5159717 aagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 5159770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 11441680 - 11441819
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  11441680 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 11441779  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  11441780 tgaagaagctcatcgatcaagggaagctgacttttgagaa 11441819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 16736495 - 16736356
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||| ||| |||||||| | ||||| ||||| || ||||| ||||| |||||  | || |||||||| || || ||||| ||||||||||| || |    
T  16736495 gatccgttacctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 16736396  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  16736395 tgaagaagctcattgatcaagggaagctgacttttgagaa 16736356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 16751549 - 16751410
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||| ||| |||||||| | ||||| ||||| || ||||| ||||| |||||  | || |||||||| || || ||||| ||||||||||| || |    
T  16751549 gatccgttacctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 16751450  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  16751449 tgaagaagctcattgatcaagggaagctgacttttgagaa 16751410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 17523640 - 17523779
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||| ||| |||||||| | ||||| ||||| || ||||| ||||| |||||  | || |||||||| || || ||||| ||||||||||| || |    
T  17523640 gatccgttacctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 17523739  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  17523740 tgaagaagctcattgatcaagggaagctgacttttgagaa 17523779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 17529575 - 17529436
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||| ||| |||||||| | ||||| ||||| || ||||| ||||| |||||  | || |||||||| || || ||||| ||||||||||| || |    
T  17529575 gatccgttacctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 17529476  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  17529475 tgaagaagctcattgatcaagggaagctgacttttgagaa 17529436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 9618759 - 9618898
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  9618759 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 9618858  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  9618859 tgaagaagctcatcgatcaagggaagctgacttttgagaa 9618898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 24592576 - 24592437
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  24592576 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 24592477  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  24592476 tgaagaagctcatcgatcaagggaagctgacttttgagaa 24592437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 31125028 - 31125167
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  31125028 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggacatgatgtcgaggggtgttatgctttgaagtatatcg 31125127  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| ||||| || || || ||| | |||||||||||    
T  31125128 tgaagaaactcatcgatcaagggaagctgacttttgagaa 31125167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 58 - 257
Target Start/End: Original strand, 22888530 - 22888729
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| ||| || |||||||||  |||||| |||| ||| | | ||||||||  |||||||||||| | ||||||||||||||||||||||| |||||    
T  22888530 tcccgactctatttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgattt 22888629  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  22888630 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcaaggaaagttaacttttgagaacaat 22888729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 58 - 257
Target Start/End: Original strand, 25199089 - 25199288
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  |||||| |||| ||| | | ||||||||  |||||||| ||| | |||||||||||||| |||||||| |||||    
T  25199089 tcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttacctcccaggttccgttctgatctcaagtgtgattt 25199188  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  25199189 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttaaagtacattgtgaagaagctcattgatcaaggaaagttaacttttgagaacaat 25199288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 60 - 257
Target Start/End: Original strand, 23892268 - 23892465
Alignment:
Q  60 ccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttcc 159  Q
    ||||| |||||| |||||||||  |||||| |||| ||| | | ||||||||  |||||||||||| | |||||||| || |||||||| || |||||||    
T  23892268 ccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccggtccgacctcaaatgtgatttcc 23892367  T
Q  160 atcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||||||||| |||||||| ||| |||| || ||| |||||||||| || |||||||||||||| || ||||||||||||||||||||||||    
T  23892368 atcaaggtgctctgggtcatgatgtcgaaagatgctatgctctgaagtacatcgtgaagaagctcattgatcaaggaaagttaacttttgagaacaat 23892465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 29889176 - 29888985
Alignment:
Q  66 ctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaag 165  Q
    |||||| |||||||||  |||||  |||| ||| | | ||||||||  |||||||||||| | |||||||| ||||||||||  || |||||||||||||    
T  29889176 ctacttctcagagggcactgcaccaccagacagggcaagcctccacctgatccgttgcctcccaggttccggtctgacctcatatgtgatttccatcaag 29889077  T
Q  166 gtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||| |||||||| |||||||| || |||||||||||||| || |||||||||||||| || |||||||| |||||||||||||||    
T  29889076 gtgctctgggtcatgatgtcgaaggatgctatgctttgaagtacatcgtgaagaagctcattgatcaaggaaagttgacttttgagaacaat 29888985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 256
Target Start/End: Original strand, 11325854 - 11326052
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| |||||||| || |||||    
T  11325854 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaaatgtgattt 11325953  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  11325954 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 11326052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 256
Target Start/End: Original strand, 33877307 - 33877505
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  33877307 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 33877406  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| |||||||| |||||||| || ||||||||  ||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  33877407 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaacacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 33877505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 13184750 - 13184555
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  13184750 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 13184651  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  13184650 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 13184555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 13440596 - 13440401
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  13440596 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 13440497  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  13440496 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 13440401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 37671529 - 37671386
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  37671529 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 37671430  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    | |||||||||||||| ||||||||| | |||||||||||||||    
T  37671429 tgaagaagctcattgatcagggaaagctgacttttgagaacaat 37671386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 9548589 - 9548450
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| |||||||| ||||| ||||||||||| || || |||||||| || || || || ||||||||||| || |    
T  9548589 gatccgttgcctccaaggttcaggtctgatctcaagtgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgctatgctttgaagtatatcg 9548490  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  9548489 tgaagaagctcattgatcaaggaaagctgacttttgagaa 9548450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 15658806 - 15658667
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  15658806 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 15658707  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  15658706 tgaagaagctcattgatcaaggaaagctgacttttgagaa 15658667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 18500776 - 18500637
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  18500776 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 18500677  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  18500676 tgaagaagctcattgatcagggaaagctgacttttgagaa 18500637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 31431556 - 31431695
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || |||||||| ||||||||||| || |    
T  31431556 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgagggatgttatgctttgaagtatatcg 31431655  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  31431656 tgaagaagctcattgatcagggaaagctgacttttgagaa 31431695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 37771033 - 37770890
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| ||      
T  37771033 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatca 37770934  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    | |||||||||||||| ||||||||| | |||||||||||||||    
T  37770933 tgaagaagctcattgatcagggaaagctgacttttgagaacaat 37770890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 13324885 - 13324736
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| ||||| || || || |||||||||||| | || |||||||| || || ||||| ||||||    
T  13324885 gcctccaccggaccctttacctccaaggttccgctctgatctcaaatgtgactttcatcaaggtgctttaggtcatgatgtcgaggggtgttatgctttg 13324786  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  13324785 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 13324736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 22999160 - 22999021
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || |||||||| ||||| ||||||||||| || || |||||||| || || || || ||||||||||| || |    
T  22999160 gatccgttgcctccaaggttcaggtccgatctcaagtgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgctatgctttgaagtatatcg 22999061  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  22999060 tgaagaagctcattgatcaaggaaagctgacttttgagaa 22999021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 23752496 - 23752357
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || |||||||| || ||||| ||||||||||| || || |||||||| || || || || ||||||||||| || |    
T  23752496 gatccgttgcctccaaggttcaggtccgacctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgctatgctttgaagtatatcg 23752397  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  23752396 tgaagaagctcattgatcaaggaaagctgacttttgagaa 23752357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 30168585 - 30168724
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| |||||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  30168585 gatccgttgcctccaaggttcaggtctgatctcaaatgcgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 30168684  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  30168685 tgaagaagctcattgatcaagggaagctcacttttgagaa 30168724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 32599518 - 32599379
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  32599518 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgcattaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 32599419  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  32599418 tgaagaagctcattgatcagggaaagctgacttttgagaa 32599379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 33777603 - 33777742
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || |||||||| || ||||| |||||||| || ||||| |||||||| || || || |||||||||||||| || |    
T  33777603 gatccgttgcctccaaggttcaggtccgacctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctacgctttgaagtatatcg 33777702  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | || ||||||||||| || |||||| | |||||||||||    
T  33777703 tgaaaaagctcattgatcaaggaaagctgacttttgagaa 33777742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 37755096 - 37755235
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  37755096 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 37755195  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  37755196 tgaagaagctcattgatcagggaaagctgacttttgagaa 37755235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 43078368 - 43078507
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  43078368 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 43078467  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||| |||| ||||||||| | |||||||||||    
T  43078468 tgaagaagctcgttgatcagggaaagctgacttttgagaa 43078507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 253
Target Start/End: Original strand, 24681546 - 24681695
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  24681546 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttg 24681645  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  24681646 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 24681695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 253
Target Start/End: Original strand, 24724073 - 24724222
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  24724073 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttg 24724172  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  24724173 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 24724222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 40473605 - 40473456
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  40473605 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttg 40473506  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  40473505 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 40473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 11549470 - 11549609
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  11549470 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 11549569  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  11549570 tgaagaagctcattgatcaaggaaagctgacttttgagaa 11549609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 23718034 - 23717895
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  23718034 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 23717935  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  23717934 tgaagaagctcattgatcaaggaaagctgacttttgagaa 23717895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 24688203 - 24688064
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| | |||||| | || || ||||| || |||||||||||||| |||||||| |||||||| || || || || ||||||||||| || |    
T  24688203 gatccgttgcctcccaggttcaggtccgatctcaaatgtgatttccatcaaggcgctctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 24688104  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | || ||||||||||| || |||||| | |||||||||||    
T  24688103 tgaaaaagctcattgatcaaggaaagctgacttttgagaa 24688064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 24970134 - 24970273
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || |||||||||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  24970134 gatccgttgcctccaaggttcaggtccgatctcaaatgtgatttccatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 24970233  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || ||||||   |||||||||||    
T  24970234 tgaagaagctcattgatcaaggaaagcggacttttgagaa 24970273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 28649351 - 28649490
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  28649351 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 28649450  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  28649451 tgaagaagctcattgatcaagggaagctgacttttgagaa 28649490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 30152134 - 30152273
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  30152134 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 30152233  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  30152234 tgaagaagctcatcgatcaagggaagctgacttttgagaa 30152273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 31826453 - 31826314
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| ||||    
T  31826453 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatattg 31826354  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  31826353 tgaagaagctcattgatcaagggaagctgacttttgagaa 31826314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 33516472 - 33516611
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| || || || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  33516472 gatccgttgcctccaaggttcaggtctgatcttaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 33516571  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  33516572 tgaagaagctcattgatcagggaaagctgacttttgagaa 33516611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 253
Target Start/End: Original strand, 2511157 - 2511306
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    ||||||||  |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || || ||||| ||||||    
T  2511157 gcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttg 2511256  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || ||||||||||| || || || ||| | |||||||||||    
T  2511257 aagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 2511306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 8665531 - 8665382
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    ||||||||  |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || || ||||| ||||||    
T  8665531 gcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttg 8665432  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || ||||||||||| || || || ||| | |||||||||||    
T  8665431 aagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 8665382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 15758913 - 15758764
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    ||||||||  |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || || ||||| ||||||    
T  15758913 gcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttg 15758814  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || ||||||||||| || || || ||| | |||||||||||    
T  15758813 aagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 15758764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 33292631 - 33292784
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || ||||| || ||||||||||| ||| | || ||||||||||| || || || ||| |     
T  33292631 gcctccaccggaccctttacctccaaggttccgctctgatcttaagtgtgacttccatcaaggcgctttagggcatgatgttgaggggtgctatgctcta 33292730  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||| || |||||||| || || || || |||||||||||||||||||||    
T  33292731 aagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 33292784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 9317567 - 9317706
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  9317567 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 9317666  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  9317667 tgaagaagctcatcgatcaagggaagctgacttttgagaa 9317706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 12132271 - 12132410
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  12132271 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 12132370  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  12132371 tgaagaagctcatcgatcaagggaagctgacttttgagaa 12132410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 30934749 - 30934888
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| | |||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  30934749 gatccgttgcctcccaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 30934848  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  30934849 tgaagaagctcattgatcaaggaaagctgacttttgagaa 30934888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 37358689 - 37358550
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| ||||    
T  37358689 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggacatgatgtcgaggggtgttatgctttgaagtatattg 37358590  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  37358589 tgaagaaactcattgatcaagggaagctgacttttgagaa 37358550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 41674825 - 41674964
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||||| || |||||||||||||| || || || ||| | |||||||| |    
T  41674825 gatccgttgcctccaaggttcagatctgatctcaaatgtgattttcatcaaggtgccctaggccatgatgttgaggggtgctatgctctaaagtacatcg 41674924  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||| || || || || ||| | |||||||||||    
T  41674925 tcaagaagcttatagatcaagggaagctgacttttgagaa 41674964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 3789657 - 3789796
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  3789657 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 3789756  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  3789757 tgaagaaactcattgatcaagggaagctgacttttgagaa 3789796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 28959832 - 28959693
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  28959832 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 28959733  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  28959732 tgaagaaactcattgatcaagggaagctgacttttgagaa 28959693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 29967112 - 29966973
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  |||| ||||| || || || ||||| ||||||||||| || |    
T  29967112 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttgggtcatgacgtcgaggggtgttatgctttgaagtatatcg 29967013  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  29967012 tgaagaagctcatcgatcaagggaagctgacttttgagaa 29966973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 30029531 - 30029670
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  |||| ||||| || || || ||||| ||||||||||| || |    
T  30029531 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttgggtcatgacgtcgaggggtgttatgctttgaagtatatcg 30029630  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  30029631 tgaagaagctcatcgatcaagggaagctgacttttgagaa 30029670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 34616634 - 34616773
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  34616634 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 34616733  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  34616734 tgaagaaactcattgatcaagggaagctgacttttgagaa 34616773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 253
Target Start/End: Original strand, 6874411 - 6874560
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    ||||||||  |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || ||||| || || || ||||| ||||||    
T  6874411 gcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttg 6874510  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||| || || || || ||| | |||||||||||    
T  6874511 aagtatatcgtgaagaagcttatcgatcaagggaagctgacttttgagaa 6874560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 18375458 - 18375319
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  18375458 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 18375359  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  18375358 tgaagaagctcatcgatcaagggaagctgacttttgagaa 18375319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 26480508 - 26480647
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  26480508 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 26480607  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  26480608 tgaagaagctcatcgatcaagggaagctgacttttgagaa 26480647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 5638026 - 5638138
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  5638026 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 5638125  T
Q  214 taaagaagctcat 226  Q
    | |||||||||||    
T  5638126 tgaagaagctcat 5638138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 119 - 257
Target Start/End: Original strand, 21673 - 21811
Alignment:
Q  119 gttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaag 218  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  21673 gttgcctcccaggttccgttctgacctcaagtgcgatttccatcaaggggctctgggccaagatgttgaaggatgttacgctttgaagtagattgtaaag 21772  T
Q  219 aagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  21773 aagctcattgaccagggaaagttaacttttaagaacaat 21811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 58 - 257
Target Start/End: Original strand, 20439 - 20637
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  |||||| |||| ||| | | ||||||||  |||||||||||| | ||||||||||||||||||||||| |||||    
T  20439 tcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgattt 20538  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||||||||    
T  20539 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcaaggaaa-ttaacttttgagaacaat 20637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 30559 - 30698
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| || || || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  30559 gatccgttgcctccaaggttcaggtctgatcttaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 30658  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  30659 tgaagaagctcattgatcagggaaagctgacttttgagaa 30698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 58 - 256
Target Start/End: Complemental strand, 233 - 35
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  ||| || |||| ||  | | ||||||||  |||||||||||| | ||||||||||||||||||||||| |||||    
T  233 tcccgactctacttctcagagggcactgctcaaccagacatggcaagcctccacctgatccgttgccttccaggttccgttctgacctcaagtgtgattt 134  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||||||    
T  133 ccatcaaggtgctctgggtcatgatgttgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcagggaaagttaaccttcgagaacaa 35  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 2855 - 2664
Alignment:
Q  66 ctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaag 165  Q
    |||||| |||||||||  | |||| |||| ||| | | ||||||||  |||||||| ||| | ||||||||||||||||||||||| |||||||||||||    
T  2855 ctacttctcagagggcactacacaaccagacagggcaagcctccacctgatccgttacctcctaggttccgttctgacctcaagtgtgatttccatcaag 2756  T
Q  166 gtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||    
T  2755 gtgctctgggtcatgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattaaccaaggaaagttaacttttgagaacaat 2664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 6e-52; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 58 - 257
Target Start/End: Complemental strand, 27290518 - 27290319
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  | |||| |||| ||| | | ||||||||  |||||||| ||| | | ||||||||||||||||||||| |||||    
T  27290518 tcccgactctacttctcagagggcactacacaaccagacagggcaagcctccacctgatccgttacctcccaagttccgttctgacctcaagtgtgattt 27290419  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  27290418 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgcgttgaagtacattgtgaagaagctcattgatcaaggaaagttaacttttgagaacaat 27290319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 22457082 - 22456887
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| | |||  |||||| |||| ||| | | ||||||||  |||||||||||| | |||||||||||| |||||||||| |||||    
T  22457082 tcccgactctacttctcataaggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttcttacctcaagtgtgattt 22456983  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  22456982 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttaaagtacattgtgaagaagctcatagaccaaggaaagttaacttttgagaa 22456887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 58 - 256
Target Start/End: Complemental strand, 14143433 - 14143235
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  ||| ||  ||| ||| | | ||||||||  |||||||| ||| | |||||||| ||||||||||| || |||||    
T  14143433 tcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 14143334  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  14143333 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 14143235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 58 - 256
Target Start/End: Original strand, 26787992 - 26788190
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  ||| ||  ||| ||| | | ||||||||  |||||||| ||| | |||||||| ||||||||||| || |||||    
T  26787992 tcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 26788091  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  26788092 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 26788190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 58 - 256
Target Start/End: Original strand, 27196365 - 27196563
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  ||| ||  ||| ||| | | ||||||||  |||||||| ||| | |||||||| ||||||||||| || |||||    
T  27196365 tcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 27196464  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  27196465 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 27196563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 58 - 256
Target Start/End: Complemental strand, 27252875 - 27252677
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  ||| ||  ||| ||| | | ||||||||  |||||||| ||| | |||||||| ||||||||||| || |||||    
T  27252875 tcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 27252776  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  27252775 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 27252677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 22477421 - 22477240
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| | |||  |||||| |||| ||| | | ||||||||  |||||||||||| | |||||||||||| |||||||||| |||||    
T  22477421 tcccgactctacttctcatatggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctaacctcaagtgtgattt 22477322  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaag 239  Q
    |||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| ||||||||||| ||||| ||||||    
T  22477321 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttaaagtacattgtgaagaagctcatagaccaaggaaag 22477240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 256
Target Start/End: Complemental strand, 13522221 - 13522023
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  13522221 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 13522122  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| |||||||| |||||||| || ||||||||  ||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  13522121 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaacacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 13522023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 33374404 - 33374209
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  33374404 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 33374305  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || |||||||||||    
T  33374304 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacttttgagaa 33374209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 28162705 - 28162900
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||| ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  28162705 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacttgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 28162804  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| | |||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  28162805 ccatcaaggtgctatgggtcatgatgtcggaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 28162900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 8892458 - 8892264
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  8892458 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 8892359  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  8892358 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaa-aaactcatagaccaaggaaaattgacctttgagaa 8892264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 8903693 - 8903499
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  8903693 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 8903594  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  8903593 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaa-aaactcatagaccaaggaaaattgacctttgagaa 8903499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 4545867 - 4545724
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||| | || |||||||| || || ||||| ||||||||||| || |    
T  4545867 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgctttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 4545768  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    | |||||||||||||| ||||||||| | |||||||||||||||    
T  4545767 tgaagaagctcattgatcagggaaagctgacttttgagaacaat 4545724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 27007831 - 27007970
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  27007831 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 27007930  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||||||||||||| | |||||||||||    
T  27007931 tgaagaagctcattgaccagggaaagctgacttttgagaa 27007970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 4525390 - 4525533
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| | ||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| ||||    
T  4525390 gatccgttgcctccaaggttcaggtctgatcccaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatattg 4525489  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    | |||||||||||||| ||||||||| | |||||||||||||||    
T  4525490 tgaagaagctcattgatcagggaaagctgacttttgagaacaat 4525533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 4757868 - 4758007
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || |||||||| ||||||||||| || |    
T  4757868 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgagggatgttatgctttgaagtatatcg 4757967  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  4757968 tgaagaagctcattgatcagggaaagctgacttttgagaa 4758007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 4773110 - 4773249
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||| | || |||||||| || || ||||| ||||||||||| || |    
T  4773110 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgctttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 4773209  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  4773210 tgaagaagctcattgatcagggaaagctgacttttgagaa 4773249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 22934972 - 22934833
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| | |||||| | || |||||||| || |||||||||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  22934972 gatccgttgcctcccaggttcaggtccgacctcaaatgtgatttccatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 22934873  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| |||||||||||||    
T  22934872 tgaagaagctcattgatcaaggaaagctaacttttgagaa 22934833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 23857417 - 23857278
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| | |||||| | || |||||||| || |||||||||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  23857417 gatccgttgcctcccaggttcaggtccgacctcaaatgtgatttccatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 23857318  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| |||||||||||||    
T  23857317 tgaagaagctcattgatcaaggaaagctaacttttgagaa 23857278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 27360084 - 27359945
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || |||||||| ||||||||||| || |    
T  27360084 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgagggatgttatgctttgaagtatatcg 27359985  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  27359984 tgaagaagctcattgatcagggaaagctgacttttgagaa 27359945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 27450427 - 27450288
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || |||||||| ||||||||||| || |    
T  27450427 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgagggatgttatgctttgaagtatatcg 27450328  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  27450327 tgaagaagctcattgatcagggaaagctgacttttgagaa 27450288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 29549579 - 29549718
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  29549579 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 29549678  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  29549679 tgaagaagctcattgatcaaggaaagctgacttttgagaa 29549718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 34463438 - 34463299
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  34463438 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 34463339  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  34463338 tgaagaagctcattgatcagggaaagctgacttttgagaa 34463299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 3696185 - 3696324
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| |||||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  3696185 gatccgttgcctccaaggttcaggtctgatctcaaatgcgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 3696284  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  3696285 tgaagaagctcattgatcaagggaagctgacttttgagaa 3696324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 4724226 - 4724083
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  4724226 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 4724127  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    | ||||| |||||||| ||||||||| | |||||||||||||||    
T  4724126 tgaagaaactcattgatcagggaaagctgacttttgagaacaat 4724083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 16749958 - 16750097
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  16749958 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 16750057  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  16750058 tgaagaagctcattgatcaaggaaagctgacttttgagaa 16750097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 26116502 - 26116363
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  26116502 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 26116403  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  26116402 tgaagaagctcattgatcagggaaagctgacttttgagaa 26116363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 26989105 - 26989244
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  26989105 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 26989204  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||||||||| || |||||| | |||||||||||    
T  26989205 taaagaagctcattgatcaaggaaagctgacttttgagaa 26989244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 253
Target Start/End: Original strand, 17025371 - 17025520
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  17025371 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggacatgatgtcgaggggtgttatgctttg 17025470  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  17025471 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 17025520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 13299043 - 13298904
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| ||||| || || ||||| ||| |||||||||| || |    
T  13299043 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgacgtcgagggatgctacactttgaagtatatcg 13298944  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  13298943 tgaagaagctcattgatcaaggaaagctgacttttgagaa 13298904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 16674243 - 16674382
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  16674243 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 16674342  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  16674343 tgaagaagctcattgatcaagggaagctgacttttgagaa 16674382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 24304710 - 24304571
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| ||||||||||| ||||| |||||||| || || || || | ||||||||| || |    
T  24304710 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggtgccctgggtcatgatgtcgaggggtgctatgatttgaagtatatcg 24304611  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  24304610 tgaagaagctcattgatcaaggaaagctgacttttgagaa 24304571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 24863821 - 24863960
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  24863821 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 24863920  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  24863921 tgaagaagctcattgatcaaggaaagctgacttttgagaa 24863960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 26918484 - 26918623
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||| || ||||| |||||||| || || || |||||||||||||| || |    
T  26918484 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctacgctttgaagtatatcg 26918583  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | || ||||| ||||| || |||||| | |||||||||||    
T  26918584 tgaaaaagcttattgatcaaggaaagctgacttttgagaa 26918623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 30558108 - 30557969
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| || || || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  30558108 gatccgttgcctccaaggttcaggtctgatcttaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 30558009  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  30558008 tgaagaagctcattgatcagggaaagctgacttttgagaa 30557969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 27000177 - 27000316
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  27000177 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 27000276  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | || ||||||||||| || |||||| | |||||||||||    
T  27000277 tgaaaaagctcattgatcaaggaaagctgacttttgagaa 27000316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 28207558 - 28207697
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| ||||    
T  28207558 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggacatgatgtcgaggggtgttatgctttgaagtatattg 28207657  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  28207658 tgaagaaactcattgatcaagggaagctgacttttgagaa 28207697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 29573117 - 29573256
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  29573117 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 29573216  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  29573217 tgaagaagctcatcgatcaagggaagctgacttttgagaa 29573256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 20160765 - 20160923
Alignment:
Q  74 cagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctg 173  Q
    ||||||||  |||||| |||||||  | | ||||||||  |||||||| ||| | |||||| |||| || |||||||| |||||||| ||||||||  |     
T  20160765 cagagggcattgcacaaccaggcaaggcaagcctccacctgatccgttacctcccaggttctgttccgatctcaagtgtgatttccaccaaggtgcctta 20160864  T
Q  174 ggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgacca 232  Q
    || |||||||| ||||| || || ||||||||||| ||||| || |||||||| |||||    
T  20160865 ggtcatgatgtggaagggtgctatgctttgaagtatattgtgaaaaagctcatagacca 20160923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 22172066 - 22171908
Alignment:
Q  74 cagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctg 173  Q
    ||||||||  |||||| |||||||  | | ||||||||  |||||||| ||| | |||||| |||| || |||||||| |||||||| ||||||||  |     
T  22172066 cagagggcattgcacaaccaggcaaggcaagcctccacctgatccgttacctcccaggttctgttccgatctcaagtgtgatttccaccaaggtgcctta 22171967  T
Q  174 ggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgacca 232  Q
    || |||||||| ||||| || || ||||||||||| ||||| || |||||||| |||||    
T  22171966 ggtcatgatgtggaagggtgctatgctttgaagtatattgtgaaaaagctcatagacca 22171908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 15424409 - 15424270
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| ||  |||| |||||||| || || || || ||||||||||| || |    
T  15424409 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccttgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 15424310  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | || ||||||||||| || |||||| | |||||||||||    
T  15424309 tgaaaaagctcattgatcaaggaaagctgacttttgagaa 15424270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 16944119 - 16943980
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  |||| ||||| || || || ||||| ||||||||||| || |    
T  16944119 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttgggtcatgacgtcgaggggtgttatgctttgaagtatatcg 16944020  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  16944019 tgaagaagctcatcgatcaagggaagctgacttttgagaa 16943980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 26777707 - 26777568
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  26777707 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 26777608  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  26777607 tgaagaaactcattgatcaagggaagctgacttttgagaa 26777568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 27485233 - 27485372
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  27485233 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggacatgatgtcgaggggtgttatgctttgaagtatatcg 27485332  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  27485333 tgaagaaactcattgatcaagggaagctgacttttgagaa 27485372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 29501519 - 29501658
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  29501519 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 29501618  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  29501619 tgaagaaactcattgatcaagggaagctgacttttgagaa 29501658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 27272672 - 27272560
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    ||||||| |||| | |||||| | || |||||||| || |||||||||||||| |||||||| |||||||| || || || || ||||||||||| || |    
T  27272672 gatccgtcgcctcccaggttcaggtccgacctcaaatgtgatttccatcaaggcgctctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 27272573  T
Q  214 taaagaagctcat 226  Q
    | || ||||||||    
T  27272572 tgaaaaagctcat 27272560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 253
Target Start/End: Complemental strand, 17092431 - 17092393
Alignment:
Q  215 aaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  17092431 aaagaagctcattgaccagggaaagttgacttttgagaa 17092393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 253
Target Start/End: Original strand, 27044494 - 27044631
Alignment:
Q  117 ccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggat-gttacgctttgaagtacattgta 215  Q
    ||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || | |||| ||||||||||| || ||     
T  27044494 ccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtggttatgctttgaagtatatcgtg 27044593  T
Q  216 aagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| |||||||| || || ||| | |||||||||||    
T  27044594 aagaaactcattgatcaagggaagctgacttttgagaa 27044631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 6e-52; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 18530408 - 18530595
Alignment:
Q  66 ctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaag 165  Q
    |||||| |||||||||  |||||| |||| ||| | | ||||||||  |||||||||||| | ||||||||||||||||||||||| |||||||||||||    
T  18530408 ctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatcaag 18530507  T
Q  166 gtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||| || || ||||||||    
T  18530508 gtgctctgggtcatgatgttgaaggatgctacgctttgaagtacattgtaaaaaagctcatagaccaaggaaaattgacctttgagaa 18530595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 66 - 253
Target Start/End: Complemental strand, 16626744 - 16626557
Alignment:
Q  66 ctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaag 165  Q
    |||||| | |||||||  |||||| |||| ||| | | ||||||||  |||||||||||| | ||||||||||||||||||||||| |||||||||||||    
T  16626744 ctacttcttagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatcaag 16626645  T
Q  166 gtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||| || || ||||||||    
T  16626644 gtgctctgggtcatgatgttgaaggatgctacgctttgaagtacattgtaaaaaagctcatagaccaaggaaaattgacctttgagaa 16626557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 58 - 256
Target Start/End: Complemental strand, 31034363 - 31034165
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  ||||||  ||| ||| | | ||||||||  |||||||| ||| | |||||||| ||||||||||| || |||||    
T  31034363 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccacctgatccgttacctcctaggttccggtctgacctcaaatgtgattt 31034264  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  31034263 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 31034165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 58 - 256
Target Start/End: Original strand, 32292764 - 32292962
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| |||||||||  ||||||  ||| ||| | | | ||||||  |||||||| ||| | |||||||| ||||||||||| || |||||    
T  32292764 tcccgactctacttctcagagggcactgcacaatcagacaggggaagtctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 32292863  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    |||||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  32292864 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 32292962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 4625956 - 4626151
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| ||||||||||| |||||    
T  4625956 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 4626055  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  4626056 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 4626151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 131 - 253
Target Start/End: Original strand, 5652472 - 5652594
Alignment:
Q  131 gttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgac 230  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| |||    
T  5652472 gttccgttcggacctcaagtgtgatttccatcaaggtgctctgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagac 5652571  T
Q  231 cagggaaagttaacttttgagaa 253  Q
    || ||||| || || ||||||||    
T  5652572 caaggaaaattgacctttgagaa 5652594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 17994030 - 17993835
Alignment:
Q  58 tcccgacgctacttgtcagagggctgtgcacacccaggcagtgaaggcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgattt 157  Q
    ||||||| |||||| ||| |||||  |||||| |||| ||| | | ||||||||  ||||| | |||| | | ||||||||| |||||||| || |||||    
T  17994030 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaaatgtgattt 17993931  T
Q  158 ccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||| ||||| || || ||||||||    
T  17993930 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 17993835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 7073280 - 7073419
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  7073280 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 7073379  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| |||||||||||||    
T  7073380 tgaagaagctcattgatcaaggaaagctaacttttgagaa 7073419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 11110549 - 11110400
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    ||||||||  |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  11110549 gcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttg 11110450  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  11110449 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 11110400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 4346877 - 4346738
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  4346877 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 4346778  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  4346777 tgaagaagctcattgatcagggaaagctgacttttgagaa 4346738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 6542652 - 6542509
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  6542652 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 6542553  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    | |||||||||||||| ||||||||| | |||||||||||||||    
T  6542552 tgaagaagctcattgatcagggaaagctgacttttgagaacaat 6542509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 22871046 - 22870907
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  22871046 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 22870947  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  22870946 tgaagaagctcattgatcagggaaagctgacttttgagaa 22870907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 22886105 - 22885966
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  22886105 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 22886006  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  22886005 tgaagaagctcattgatcagggaaagctgacttttgagaa 22885966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 253
Target Start/End: Complemental strand, 28116150 - 28116005
Alignment:
Q  108 ccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagt 207  Q
    ||||| |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||| | || |||||||| || || ||||| ||||||||||    
T  28116150 ccacttgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgctttaggtcatgatgtcgaggggtgttatgctttgaagt 28116051  T
Q  208 acattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | || || |||||||||||||| || |||||| | || ||||||||    
T  28116050 atatcgtgaagaagctcattgatcaaggaaagctgacatttgagaa 28116005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 29665170 - 29665021
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||| | || |||||||| || || ||||| ||||||    
T  29665170 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgctttaggtcatgatgtcgaggggtgttatgctttg 29665071  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  29665070 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 29665021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 4416987 - 4417126
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||| |||||  | || |||||||| || || ||||| ||||||||||| ||||    
T  4416987 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatattg 4417086  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  4417087 tgaagaagctcattgatcaaggaaagctgacttttgagaa 4417126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 8301457 - 8301318
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || |||||||||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  8301457 gatccgttgcctccaaggttcaggtccgatctcaaatgtgatttccatcaaggcgccctgggtcatgatgtagaggggtgctatgctttgaagtatatcg 8301358  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  8301357 tgaagaagctcattgatcaaggaaagctgacttttgagaa 8301318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 253
Target Start/End: Complemental strand, 15741280 - 15741145
Alignment:
Q  118 cgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaa 217  Q
    |||||||| |||||||| | || || ||||| || ||||| |||||||| |||||||| |||||||| || ||||| || ||||||||||| || || ||    
T  15741280 cgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgctctgggtcatgatgtcgagggatgctatgctttgaagtatatcgtgaa 15741181  T
Q  218 gaagctcattgaccagggaaagttaacttttgagaa 253  Q
    |||||||||||| || |||||| | |||||||||||    
T  15741180 gaagctcattgatcaaggaaagctgacttttgagaa 15741145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 18277242 - 18277103
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||| ||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  18277242 gatcagttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 18277143  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  18277142 tgaagaagctcattgatcagggaaagctgacttttgagaa 18277103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 18292543 - 18292404
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||| ||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  18292543 gatcagttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 18292444  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  18292443 tgaagaagctcattgatcagggaaagctgacttttgagaa 18292404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 18307844 - 18307705
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||| ||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  18307844 gatcagttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 18307745  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| ||||||||| | |||||||||||    
T  18307744 tgaagaagctcattgatcagggaaagctgacttttgagaa 18307705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 18330737 - 18330876
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || |||||||||||||| || |    
T  18330737 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctacgctttgaagtatatcg 18330836  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  18330837 tgaagaagctcattgatcaaggaaagctgacttttgagaa 18330876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 22387768 - 22387629
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  22387768 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 22387669  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  22387668 tgaagaagctcattgatcaaggaaagctgacttttgagaa 22387629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 29148945 - 29148806
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||||| || || |||||||| || || || || ||||||||||| || |    
T  29148945 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgctatgctttgaagtatatcg 29148846  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  29148845 tgaagaagctcattgatcaaggaaagctgacttttgagaa 29148806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 48465995 - 48466134
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  48465995 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 48466094  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  48466095 tgaagaagctcattgatcaaggaaagctgacttttgagaa 48466134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 253
Target Start/End: Complemental strand, 20577047 - 20576898
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || || || ||||| |||||||||||  | || |||||||| || || ||||| ||||||    
T  20577047 gcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttg 20576948  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||| || || |||||||||||||| ||||||||| | |||||||||||    
T  20576947 aagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 20576898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 5013780 - 5013919
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  5013780 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 5013879  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  5013880 tgaagaagctcatcgatcaagggaagctgacttttgagaa 5013919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 8211806 - 8211945
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  8211806 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 8211905  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  8211906 tgaagaagctcattgatcaagggaagctgacttttgagaa 8211945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 8296040 - 8296179
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||| ||||||| | |||||| | || || ||||| || ||||| ||||||||||| ||||| |||||||| || || || || ||||||||||| || |    
T  8296040 gatctgttgcctcccaggttcaggtccgatctcaaatgtgattttcatcaaggtgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 8296139  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||||| |||||||||||    
T  8296140 tgaagaagctcattgatcaaggaaagttgacttttgagaa 8296179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 10396201 - 10396316
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  10396201 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 10396300  T
Q  214 taaagaagctcattga 229  Q
    | ||||||||||||||    
T  10396301 tgaagaagctcattga 10396316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 21674761 - 21674900
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  21674761 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 21674860  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  21674861 tgaagaagctcattgatcaagggaagctgacttttgagaa 21674900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 36997267 - 36997128
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| ||||    
T  36997267 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatattg 36997168  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  36997167 tgaagaagctcattgatcaagggaagctgacttttgagaa 36997128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 47023521 - 47023660
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  47023521 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 47023620  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  47023621 tgaagaagctcatcgatcaagggaagctgacttttgagaa 47023660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 51782091 - 51782230
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  51782091 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 51782190  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || ||||||||| | |||||||||||    
T  51782191 tgaagaagctcatcgatcagggaaagctgacttttgagaa 51782230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 256
Target Start/End: Original strand, 5713295 - 5713437
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  5713295 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 5713394  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    | |||||||||||||| || || ||| | ||||||||||||||    
T  5713395 tgaagaagctcattgatcaagggaagctgacttttgagaacaa 5713437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 256
Target Start/End: Original strand, 5724205 - 5724347
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  5724205 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 5724304  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    | |||||||||||||| || || ||| | ||||||||||||||    
T  5724305 tgaagaagctcattgatcaagggaagctgacttttgagaacaa 5724347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 256
Target Start/End: Complemental strand, 5757272 - 5757130
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  5757272 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 5757173  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    | |||||||||||||| || || ||| | ||||||||||||||    
T  5757172 tgaagaagctcattgatcaagggaagctgacttttgagaacaa 5757130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 256
Target Start/End: Complemental strand, 5768163 - 5768021
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  5768163 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 5768064  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaacaa 256  Q
    | |||||||||||||| || || ||| | ||||||||||||||    
T  5768063 tgaagaagctcattgatcaagggaagctgacttttgagaacaa 5768021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 32439212 - 32439365
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    |||||||| ||| || || ||| |||||||||| ||||| || ||||| || ||||||||||| ||| | || ||||||||||| || || || ||| |     
T  32439212 gcctccaccggaccctttacctccaaggttccgctctgatcttaagtgtgacttccatcaaggcgctttagggcatgatgttgaggggtgctatgctcta 32439311  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    |||||||| || |||||||| || || || || |||||||||||||||||||||    
T  32439312 aagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 32439365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 253
Target Start/End: Original strand, 6192391 - 6192523
Alignment:
Q  121 tgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaa 220  Q
    ||||| |||||||| | || |||||||| || ||||| ||||||||||| || || |||||||| || || || || ||||||||||| || || |||||    
T  6192391 tgcctccaaggttcaggtccgacctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgctatgctttgaagtatatcgtgaagaa 6192490  T
Q  221 gctcattgaccagggaaagttaacttttgagaa 253  Q
    ||||||||| || |||||| | |||||||||||    
T  6192491 gctcattgatcaaggaaagctgacttttgagaa 6192523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 51797180 - 51797320
Alignment:
Q  114 gatccgttgcct-acaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacatt 212  Q
    |||||||||||| ||||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| ||     
T  51797180 gatccgttgcctcacaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatc 51797279  T
Q  213 gtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    || ||||||||||| || ||||||||| | |||||||||||    
T  51797280 gtgaagaagctcatcgatcagggaaagctgacttttgagaa 51797320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 4796843 - 4796704
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  4796843 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 4796744  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | || ||||||||||| || |||||| | |||||||||||    
T  4796743 tgaaaaagctcattgatcaaggaaagctgacttttgagaa 4796704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 5609512 - 5609373
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || ||||| || ||||| ||||| ||||||||||| || |    
T  5609512 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgacgtcgaagggtgttatgctttgaagtatatcg 5609413  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  5609412 tgaagaagctcatcgatcaagggaagctgacttttgagaa 5609373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 7996630 - 7996769
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| |||||||| || || |    
T  7996630 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaaatatatcg 7996729  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  7996730 tgaagaagctcatcgatcaagggaagctgacttttgagaa 7996769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 10643138 - 10643277
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| |||||||| || || |    
T  10643138 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaaatatatcg 10643237  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  10643238 tgaagaagctcatcgatcaagggaagctgacttttgagaa 10643277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 15892896 - 15892757
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    ||||| |||||| | |||||| | || || ||||| || |||||||||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  15892896 gatcctttgcctcccaggttcaggtccgatctcaaatgtgatttccatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 15892797  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  15892796 tgaagaagctcattgatcaaggaaagctgacttttgagaa 15892757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 24328227 - 24328366
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| |||||||| || || |    
T  24328227 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaaatatatcg 24328326  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  24328327 tgaagaagctcatcgatcaagggaagctgacttttgagaa 24328366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 28339370 - 28339509
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||| | || ||||| || || || ||||| ||||||||||| || |    
T  28339370 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgctttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 28339469  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  28339470 tgaagaagctcatcgatcaagggaagctgacttttgagaa 28339509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 257
Target Start/End: Original strand, 20066124 - 20066254
Alignment:
Q  127 caaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcat 226  Q
    |||||||||| ||||| || ||||| || ||||||||||| ||| | || ||||||||||| || || || ||| | |||||||| || |||||||| ||    
T  20066124 caaggttccgctctgatcttaagtgtgacttccatcaaggcgctttagggcatgatgttgaggggtgctatgctctaaagtacatcgtcaagaagcttat 20066223  T
Q  227 tgaccagggaaagttaacttttgagaacaat 257  Q
     || || || |||||||||||||||||||||    
T  20066224 agatcaagggaagttaacttttgagaacaat 20066254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 5467053 - 5467192
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  5467053 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 5467152  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||  | |||||||||||    
T  5467153 tgaagaagctcattgatcaagggaaactgacttttgagaa 5467192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 5596547 - 5596408
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  5596547 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 5596448  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  5596447 tgaagaaactcattgatcaagggaagctgacttttgagaa 5596408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 18051330 - 18051469
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||| ||||| | |||||| | || || ||||| || |||||| ||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  18051330 gatccgctgcctcccaggttcaggtccgatctcaaatgtgatttctatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 18051429  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  18051430 tgaagaagctcattgatcaaggaaagctgacttttgagaa 18051469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 18242807 - 18242946
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| || |    
T  18242807 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggacatgatgtcgaggggtgttatgctttgaagtatatcg 18242906  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  18242907 tgaagaaactcattgatcaagggaagctgacttttgagaa 18242946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 31964663 - 31964524
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  31964663 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 31964564  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  31964563 tgaagaagctcatcgatcaagggaagctgacttttgagaa 31964524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 50134261 - 50134122
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  50134261 gatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 50134162  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  50134161 tgaagaagctcatcgatcaagggaagctgacttttgagaa 50134122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 17985146 - 17985007
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| || || || || || |||||||||||  | || ||||| || || |||||||| ||||||||||| || |    
T  17985146 gatccgttgcctccaaggttcaggtctgatcttaaatgtgactttcatcaaggtgccttaggtcatgacgtcgagggatgttatgctttgaagtatatcg 17985047  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  17985046 tgaagaagctcatcgatcaagggaagctgacttttgagaa 17985007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 18225259 - 18225398
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  18225259 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 18225358  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  18225359 tgaagaagctcatcgatcaagggaagctgacttttgagaa 18225398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 28021343 - 28021482
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    ||||| || ||| |||||||| | ||||| ||||| || ||||| |||||||||||  | ||  ||||||| || || ||||| ||||||||||| || |    
T  28021343 gatccattacctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggttatgatgtcgaggggtgttatgctttgaagtatatcg 28021442  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  28021443 tgaagaagctcattgatcaagggaagctgacttttgagaa 28021482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 35880834 - 35880973
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||| ||||| |||||||| | || || ||||| || ||||| |||||||| || || || |||||||| || || || || ||||||||||| || |    
T  35880834 gatccgctgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctaggtcatgatgtcgaggggtgctatgctttgaagtatatcg 35880933  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | || ||||||||||| || |||||| | |||||||||||    
T  35880934 tgaaaaagctcattgatcaaggaaagctgacttttgagaa 35880973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 102; Significance: 9e-51; HSPs: 2)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 2076 - 1924
Alignment:
Q  104 gcctccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttg 203  Q
    ||||||||  |||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  2076 gcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttg 1977  T
Q  204 aagtacattgtaaagaagctcattgaccagggaaagttaacttttgagaacaat 257  Q
    ||||||||||| |||||||||||||| || ||||| ||||||||||||||||||    
T  1976 aagtacattgtgaagaagctcattgatcaaggaaa-ttaacttttgagaacaat 1924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 6119 - 6260
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttc-catcaaggtgctctgggccatgatgttgaaggatgttacgcttt-gaagtacat 211  Q
    |||||||||||| |||||||| | ||||| ||||| || |||||  |||||||||||  | || |||||||| || || ||||| ||||| |||||| ||    
T  6119 gatccgttgcctccaaggttcaggtctgatctcaaatgtgatttttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgcttttgaagtatat 6218  T
Q  212 tgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
     || |||||||||||||| ||||||||| | |||||||||||    
T  6219 cgtgaagaagctcattgatcagggaaagctgacttttgagaa 6260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 728 - 628
Alignment:
Q  153 gatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttttgaga 252  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  728 gatttccatcaagatgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaagttaacttttgaga 629  T
Q  253 a 253  Q
    |    
T  628 a 628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 9673 - 9812
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || ||||| |||||||||||  | || |||||||| || || ||||| ||||||||||| ||||    
T  9673 gatccgttgcctccaaggttcagatctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatattg 9772  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || || ||| | |||||||||||    
T  9773 tgaagaagctcattgatcaagggaagctgacttttgagaa 9812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 47134 - 46995
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || |||||||||||||| || |    
T  47134 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctacgctttgaagtatatcg 47035  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  47034 tgaagaagctcattgatcaaggaaagctgacttttgagaa 46995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 29870 - 30009
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || |||||||| ||||| || ||||| || ||||| || || || || ||||||||||| || |    
T  29870 gatccgttgcctccaaggttcaggtccgatctcaaatgtgatttccaccaaggcgccctgggtcacgatgtcgaggggtgctatgctttgaagtatatcg 29969  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||||||||| || |||||| | |||||||||||    
T  29970 tgaagaagctcattgatcaaggaaagctgacttttgagaa 30009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 40218 - 40079
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||  | |||||| | || || ||||| || |||||||||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  40218 gatccgttgccccccaggttcaggtccgatctcaaatgtgatttccatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 40119  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||| |||||||||| || |||||| | |||||||||||    
T  40118 tgaaggagctcattgatcaaggaaagctgacttttgagaa 40079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 9215 - 9076
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  9215 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 9116  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  9115 tgaagaagctcatcgatcaagggaagctgacttttgagaa 9076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 20122 - 20261
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| ||||| || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  20122 gatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 20221  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  20222 tgaagaagctcatcgatcaagggaagctgacttttgagaa 20261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 7388 - 7249
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || || ||||| ||||||||||| || |    
T  7388 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatcg 7289  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  7288 tgaagaagctcatcgatcaagggaagctgacttttgagaa 7249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 27399 - 27538
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | || || ||||| || ||||| |||||||| || ||||| |||||||| || || || || ||||||||||| || |    
T  27399 gatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcg 27498  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | |||||||| ||||| || |||||| | |||||||||||    
T  27499 tgaagaagcttattgatcaaggaaagctgacttttgagaa 27538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 8056 - 8195
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || |||||||| || || ||||| ||||||||||| ||||    
T  8056 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggacatgatgtcgaggggtgttatgctttgaagtatattg 8155  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||| |||||||| || || ||| | |||||||||||    
T  8156 tgaagaaactcattgatcaagggaagctgacttttgagaa 8195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 253
Target Start/End: Complemental strand, 284 - 139
Alignment:
Q  108 ccactggatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagt 207  Q
    |||| ||||||||||||| | | |||| | || || ||||| || ||||| |||||||| ||  |||| |||||||| || || || |||||||||||||    
T  284 ccaccggatccgttgcctcccaagttcaggtccgatctcaaatgtgattttcatcaaggcgcgttgggtcatgatgtcgaggggtgctacgctttgaagt 185  T
Q  208 acattgtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | || || |||||||||||||| || |||||| | |||||||||||    
T  184 atatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 26351 - 26211
Alignment:
Q  114 gatccgttgcctacaa-ggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacatt 212  Q
    |||||||||||| ||| ||||| | ||||| ||||| || || || ||||||||||| || || |||||||| || || ||||| ||||||||||| ||     
T  26351 gatccgttgcctccaaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggtgttatgctttgaagtatatc 26252  T
Q  213 gtaaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    || ||||||||||| || || || ||| | |||||||||||    
T  26251 gtgaagaagctcatcgatcaagggaagctgacttttgagaa 26211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 15079 - 14940
Alignment:
Q  114 gatccgttgcctacaaggttccgttctgacctcaagtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattg 213  Q
    |||||||||||| |||||||| | ||||| ||||| || || || |||||||||||  | || ||||| || || || ||||| ||||||||||| || |    
T  15079 gatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgacgtcgaggggtgttatgctttgaagtatatcg 14980  T
Q  214 taaagaagctcattgaccagggaaagttaacttttgagaa 253  Q
    | ||||||||||| || || || ||| | |||||||||||    
T  14979 tgaagaagctcatcgatcaagggaagctgacttttgagaa 14940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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