View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8901_low_150 (Length: 250)

Name: NF8901_low_150
Description: NF8901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8901_low_150
NF8901_low_150
[»] chr6 (35 HSPs)
chr6 (15-250)||(29615303-29615535)
chr6 (15-250)||(12167077-12167311)
chr6 (15-250)||(19285986-19286220)
chr6 (15-250)||(19877169-19877404)
chr6 (15-250)||(19882945-19883180)
chr6 (15-250)||(19786976-19787210)
chr6 (15-250)||(23837418-23837654)
chr6 (16-250)||(25470794-25471028)
chr6 (65-243)||(21566298-21566474)
chr6 (15-250)||(34641081-34641315)
chr6 (15-250)||(34647755-34647989)
chr6 (27-217)||(18799238-18799425)
chr6 (15-214)||(11283984-11284184)
chr6 (27-217)||(18788258-18788445)
chr6 (156-250)||(24562262-24562355)
chr6 (151-247)||(28290314-28290409)
chr6 (151-247)||(12941775-12941870)
chr6 (176-247)||(33682309-33682380)
chr6 (176-247)||(14033142-14033213)
chr6 (176-247)||(23835057-23835128)
chr6 (176-247)||(27562644-27562715)
chr6 (176-247)||(28359961-28360032)
chr6 (156-237)||(5290259-5290339)
chr6 (45-247)||(24513934-24514135)
chr6 (159-250)||(25347065-25347154)
chr6 (151-238)||(15457440-15457525)
chr6 (151-238)||(15464035-15464120)
chr6 (151-193)||(20011099-20011141)
chr6 (27-89)||(25395848-25395910)
chr6 (176-237)||(1592759-1592819)
chr6 (125-190)||(19472490-19472555)
chr6 (176-237)||(19726606-19726666)
chr6 (176-237)||(29416583-29416643)
chr6 (175-238)||(14581974-14582035)
chr6 (29-89)||(25749559-25749619)
[»] scaffold0634 (1 HSPs)
scaffold0634 (27-250)||(2418-2639)
[»] scaffold0154 (1 HSPs)
scaffold0154 (27-247)||(29600-29818)
[»] scaffold0001 (3 HSPs)
scaffold0001 (15-250)||(174665-174900)
scaffold0001 (15-250)||(488967-489201)
scaffold0001 (151-238)||(494074-494159)
[»] scaffold0029 (2 HSPs)
scaffold0029 (15-250)||(110598-110832)
scaffold0029 (15-238)||(116633-116855)
[»] chr4 (20 HSPs)
chr4 (15-250)||(8047000-8047244)
chr4 (27-250)||(11846905-11847126)
chr4 (27-192)||(15406764-15406928)
chr4 (166-247)||(18212128-18212208)
chr4 (151-247)||(15533761-15533856)
chr4 (176-247)||(635869-635940)
chr4 (176-247)||(53748856-53748927)
chr4 (176-247)||(41800057-41800128)
chr4 (176-247)||(42701226-42701297)
chr4 (176-247)||(51602178-51602249)
chr4 (176-247)||(51608059-51608130)
chr4 (27-192)||(14485362-14485526)
chr4 (151-238)||(14910560-14910646)
chr4 (176-237)||(4831205-4831265)
chr4 (176-237)||(4834500-4834560)
chr4 (132-192)||(10977182-10977242)
chr4 (171-237)||(11171375-11171440)
chr4 (156-237)||(13452206-13452287)
chr4 (125-190)||(13886615-13886680)
chr4 (175-238)||(26077828-26077891)
[»] chr3 (45 HSPs)
chr3 (27-247)||(17190688-17190906)
chr3 (27-247)||(24191614-24191832)
chr3 (27-247)||(16802556-16802774)
chr3 (27-247)||(17156913-17157131)
chr3 (15-250)||(41456251-41456487)
chr3 (136-250)||(9532809-9532923)
chr3 (156-250)||(8583398-8583491)
chr3 (156-250)||(14084511-14084604)
chr3 (156-250)||(14089912-14090005)
chr3 (157-250)||(13968937-13969029)
chr3 (157-250)||(13974412-13974504)
chr3 (156-250)||(24123307-24123400)
chr3 (156-250)||(49399453-49399546)
chr3 (27-247)||(17243786-17244006)
chr3 (176-247)||(4677164-4677235)
chr3 (176-247)||(8743015-8743086)
chr3 (176-247)||(8761185-8761256)
chr3 (176-247)||(13909529-13909600)
chr3 (176-247)||(13939988-13940059)
chr3 (176-247)||(13946474-13946545)
chr3 (176-247)||(41175477-41175548)
chr3 (176-247)||(41180615-41180686)
chr3 (151-247)||(12304724-12304819)
chr3 (176-247)||(12200203-12200273)
chr3 (93-236)||(23174076-23174218)
chr3 (176-247)||(44775201-44775272)
chr3 (176-247)||(44780385-44780456)
chr3 (27-192)||(18913857-18914022)
chr3 (156-237)||(11850780-11850860)
chr3 (151-247)||(18888941-18889037)
chr3 (156-238)||(31690712-31690794)
chr3 (176-238)||(23173786-23173846)
chr3 (174-238)||(14544307-14544370)
chr3 (151-193)||(14864763-14864805)
chr3 (151-193)||(17130672-17130714)
chr3 (151-236)||(18899980-18900065)
chr3 (151-192)||(10553848-10553889)
chr3 (176-237)||(14652832-14652892)
chr3 (151-192)||(14764291-14764332)
chr3 (151-192)||(23372037-23372078)
chr3 (176-237)||(34852326-34852386)
chr3 (151-192)||(38312311-38312352)
chr3 (151-192)||(51300077-51300118)
chr3 (156-192)||(20249297-20249333)
chr3 (134-190)||(30597011-30597067)
[»] chr2 (35 HSPs)
chr2 (27-247)||(23102565-23102783)
chr2 (15-250)||(26582514-26582748)
chr2 (27-250)||(23169402-23169623)
chr2 (27-250)||(23580659-23580880)
chr2 (76-247)||(23090137-23090306)
chr2 (15-250)||(5707117-5707351)
chr2 (136-250)||(6482281-6482395)
chr2 (136-250)||(6485748-6485862)
chr2 (27-247)||(23877690-23877909)
chr2 (151-247)||(9241308-9241403)
chr2 (156-250)||(200621-200714)
chr2 (156-250)||(43693381-43693474)
chr2 (157-250)||(27367687-27367779)
chr2 (158-250)||(6744428-6744519)
chr2 (151-247)||(10685731-10685826)
chr2 (27-247)||(21907099-21907319)
chr2 (151-247)||(20260799-20260894)
chr2 (176-247)||(27296110-27296181)
chr2 (176-247)||(12572311-12572382)
chr2 (176-247)||(12578793-12578864)
chr2 (176-247)||(27785695-27785766)
chr2 (176-247)||(27790916-27790987)
chr2 (27-247)||(23269050-23269269)
chr2 (27-247)||(23275919-23276138)
chr2 (27-247)||(23263834-23264053)
chr2 (176-237)||(2105577-2105638)
chr2 (151-247)||(21074086-21074182)
chr2 (151-238)||(26884128-26884213)
chr2 (151-238)||(6261663-6261748)
chr2 (151-193)||(9497-9539)
chr2 (156-237)||(28971395-28971476)
chr2 (151-192)||(19662985-19663026)
chr2 (151-192)||(27211140-27211181)
chr2 (151-192)||(29280916-29280957)
chr2 (173-237)||(22809879-22809942)
[»] scaffold0077 (1 HSPs)
scaffold0077 (27-247)||(4725-4943)
[»] chr7 (45 HSPs)
chr7 (15-250)||(12591738-12591972)
chr7 (15-250)||(13006146-13006380)
chr7 (15-250)||(13742345-13742579)
chr7 (27-247)||(16676043-16676262)
chr7 (27-247)||(17650280-17650499)
chr7 (23-250)||(12711003-12711228)
chr7 (23-250)||(13124074-13124299)
chr7 (27-247)||(20328355-20328573)
chr7 (136-250)||(14421314-14421428)
chr7 (27-247)||(11390433-11390651)
chr7 (27-247)||(11383945-11384163)
chr7 (156-250)||(4279943-4280036)
chr7 (156-250)||(19616275-19616368)
chr7 (27-192)||(21232194-21232358)
chr7 (151-247)||(23665934-23666029)
chr7 (151-247)||(11302827-11302922)
chr7 (176-247)||(20580047-20580118)
chr7 (176-247)||(23201608-23201679)
chr7 (176-247)||(23507735-23507806)
chr7 (151-247)||(29795705-29795800)
chr7 (151-247)||(29799524-29799619)
chr7 (176-247)||(807103-807174)
chr7 (176-247)||(11632046-11632117)
chr7 (176-247)||(18049336-18049407)
chr7 (176-247)||(18055815-18055886)
chr7 (151-238)||(18606841-18606927)
chr7 (173-237)||(14281762-14281825)
chr7 (136-193)||(2965891-2965948)
chr7 (151-238)||(14320682-14320767)
chr7 (28-191)||(19145418-19145581)
chr7 (28-191)||(20744817-20744980)
chr7 (151-238)||(31154342-31154427)
chr7 (156-237)||(37244422-37244504)
chr7 (125-191)||(14266165-14266231)
chr7 (156-237)||(32771475-32771556)
chr7 (151-192)||(147042-147083)
chr7 (176-237)||(1612623-1612683)
chr7 (151-192)||(13678257-13678298)
chr7 (151-192)||(14565683-14565724)
chr7 (151-192)||(15166749-15166790)
chr7 (151-192)||(16008059-16008100)
chr7 (176-237)||(16109183-16109243)
chr7 (151-192)||(18871841-18871882)
chr7 (151-192)||(20907521-20907562)
chr7 (160-237)||(18958543-18958621)
[»] chr5 (30 HSPs)
chr5 (27-247)||(22439832-22440050)
chr5 (15-250)||(23527287-23527522)
chr5 (136-250)||(19510959-19511073)
chr5 (151-247)||(37805422-37805517)
chr5 (151-247)||(23112844-23112939)
chr5 (164-250)||(1857607-1857692)
chr5 (164-250)||(21675575-21675660)
chr5 (151-247)||(9775442-9775537)
chr5 (176-247)||(17264900-17264971)
chr5 (176-247)||(22175014-22175085)
chr5 (176-247)||(17271382-17271453)
chr5 (176-247)||(21678372-21678443)
chr5 (29-192)||(18409194-18409357)
chr5 (156-237)||(24669109-24669189)
chr5 (156-237)||(24738878-24738958)
chr5 (156-237)||(24751647-24751727)
chr5 (15-75)||(19510115-19510175)
chr5 (176-237)||(10816774-10816834)
chr5 (151-193)||(19235822-19235864)
chr5 (151-193)||(22460077-22460119)
chr5 (156-237)||(27635993-27636074)
chr5 (176-237)||(758367-758427)
chr5 (176-237)||(22312945-22313005)
chr5 (151-192)||(22336082-22336123)
chr5 (151-192)||(22749728-22749769)
chr5 (176-237)||(23538801-23538861)
chr5 (151-192)||(28371586-28371627)
chr5 (151-192)||(34829003-34829044)
chr5 (151-192)||(38145913-38145954)
chr5 (151-192)||(42960057-42960098)
[»] scaffold0026 (3 HSPs)
scaffold0026 (28-250)||(12981-13202)
scaffold0026 (176-237)||(63310-63370)
scaffold0026 (151-192)||(110168-110209)
[»] chr8 (30 HSPs)
chr8 (23-250)||(19903031-19903259)
chr8 (15-250)||(17053437-17053671)
chr8 (42-250)||(25409421-25409627)
chr8 (23-247)||(23865283-23865505)
chr8 (27-247)||(14057714-14057931)
chr8 (136-250)||(44476196-44476310)
chr8 (136-250)||(44479458-44479572)
chr8 (27-192)||(25110721-25110886)
chr8 (156-250)||(23825104-23825197)
chr8 (157-250)||(30767053-30767145)
chr8 (176-244)||(9273292-9273360)
chr8 (176-247)||(1804597-1804668)
chr8 (176-247)||(18681632-18681703)
chr8 (176-247)||(31567941-31568012)
chr8 (176-247)||(31573162-31573233)
chr8 (176-247)||(36799376-36799447)
chr8 (125-247)||(18609742-18609863)
chr8 (125-236)||(23653104-23653215)
chr8 (156-237)||(31412626-31412708)
chr8 (156-237)||(31418808-31418890)
chr8 (16-75)||(44475496-44475555)
chr8 (16-75)||(44478758-44478817)
chr8 (156-237)||(23653819-23653900)
chr8 (151-193)||(24321762-24321804)
chr8 (151-192)||(8729173-8729214)
chr8 (176-237)||(22025702-22025762)
chr8 (176-237)||(22050201-22050261)
chr8 (176-237)||(22055719-22055779)
chr8 (176-237)||(22177586-22177646)
chr8 (151-192)||(27942334-27942375)
[»] scaffold0476 (1 HSPs)
scaffold0476 (27-247)||(4406-4624)
[»] scaffold0117 (1 HSPs)
scaffold0117 (23-250)||(9735-9962)
[»] scaffold0025 (1 HSPs)
scaffold0025 (27-247)||(15563-15781)
[»] chr1 (17 HSPs)
chr1 (15-250)||(41110654-41110888)
chr1 (15-250)||(20045982-20046217)
chr1 (27-247)||(19664236-19664454)
chr1 (146-250)||(20438635-20438739)
chr1 (156-250)||(21542036-21542129)
chr1 (156-250)||(42096007-42096100)
chr1 (176-247)||(27280192-27280263)
chr1 (176-247)||(32650102-32650172)
chr1 (173-238)||(19778577-19778642)
chr1 (176-237)||(22448380-22448440)
chr1 (159-237)||(36614918-36614994)
chr1 (151-193)||(20852225-20852267)
chr1 (151-193)||(20858851-20858893)
chr1 (151-193)||(21705197-21705239)
chr1 (109-191)||(21987128-21987210)
chr1 (156-237)||(23195592-23195673)
chr1 (151-192)||(16371512-16371553)
[»] scaffold0811 (1 HSPs)
scaffold0811 (23-250)||(57-282)
[»] scaffold0019 (1 HSPs)
scaffold0019 (27-144)||(49762-49879)
[»] scaffold0106 (1 HSPs)
scaffold0106 (156-250)||(38381-38474)
[»] scaffold0076 (2 HSPs)
scaffold0076 (156-250)||(30249-30342)
scaffold0076 (156-250)||(35650-35743)
[»] scaffold0028 (2 HSPs)
scaffold0028 (156-250)||(47083-47176)
scaffold0028 (156-250)||(52488-52581)
[»] scaffold0011 (1 HSPs)
scaffold0011 (156-250)||(174665-174758)
[»] scaffold0107 (1 HSPs)
scaffold0107 (27-192)||(41777-41941)
[»] scaffold0020 (1 HSPs)
scaffold0020 (27-247)||(103035-103254)
[»] scaffold1684 (1 HSPs)
scaffold1684 (27-144)||(1340-1456)
[»] scaffold0693 (1 HSPs)
scaffold0693 (26-238)||(1888-2100)
[»] scaffold0461 (2 HSPs)
scaffold0461 (26-238)||(1196-1408)
scaffold0461 (26-238)||(8132-8344)
[»] scaffold0337 (1 HSPs)
scaffold0337 (166-247)||(10365-10445)
[»] scaffold0247 (1 HSPs)
scaffold0247 (123-247)||(10148-10269)
[»] scaffold0124 (3 HSPs)
scaffold0124 (151-247)||(36924-37019)
scaffold0124 (26-238)||(44133-44345)
scaffold0124 (176-221)||(8493-8538)
[»] scaffold0235 (1 HSPs)
scaffold0235 (27-192)||(17099-17263)
[»] scaffold1299 (1 HSPs)
scaffold1299 (90-247)||(274-429)
[»] scaffold0004 (2 HSPs)
scaffold0004 (27-247)||(115587-115806)
scaffold0004 (125-190)||(129858-129923)
[»] scaffold1615 (1 HSPs)
scaffold1615 (27-192)||(577-741)
[»] scaffold1773 (1 HSPs)
scaffold1773 (202-250)||(8-56)
[»] scaffold0249 (2 HSPs)
scaffold0249 (31-192)||(7970-8131)
scaffold0249 (151-238)||(14914-14999)
[»] scaffold0034 (3 HSPs)
scaffold0034 (156-238)||(17518-17600)
scaffold0034 (156-238)||(10222-10304)
scaffold0034 (151-192)||(35886-35927)
[»] scaffold0720 (1 HSPs)
scaffold0720 (151-238)||(4285-4370)
[»] scaffold0506 (1 HSPs)
scaffold0506 (173-238)||(8407-8472)
[»] scaffold0326 (1 HSPs)
scaffold0326 (156-237)||(509-589)
[»] scaffold0232 (1 HSPs)
scaffold0232 (125-190)||(19565-19630)
[»] scaffold0222 (2 HSPs)
scaffold0222 (125-190)||(27943-28008)
scaffold0222 (176-237)||(5124-5184)
[»] scaffold0220 (1 HSPs)
scaffold0220 (176-237)||(10341-10401)
[»] scaffold1061 (1 HSPs)
scaffold1061 (27-190)||(1137-1299)
[»] scaffold0067 (3 HSPs)
scaffold0067 (174-238)||(47528-47591)
scaffold0067 (174-238)||(56562-56625)
scaffold0067 (174-238)||(62948-63011)
[»] scaffold0395 (1 HSPs)
scaffold0395 (125-192)||(4286-4353)
[»] scaffold0089 (1 HSPs)
scaffold0089 (151-237)||(1870-1956)
[»] scaffold0706 (1 HSPs)
scaffold0706 (173-238)||(3434-3499)
[»] scaffold0126 (1 HSPs)
scaffold0126 (173-238)||(44197-44262)
[»] scaffold0104 (2 HSPs)
scaffold0104 (156-237)||(26071-26152)
scaffold0104 (156-237)||(27453-27534)
[»] scaffold0094 (1 HSPs)
scaffold0094 (27-89)||(50979-51041)
[»] scaffold0037 (1 HSPs)
scaffold0037 (125-191)||(97503-97569)
[»] scaffold0023 (1 HSPs)
scaffold0023 (173-238)||(156882-156947)
[»] scaffold0609 (1 HSPs)
scaffold0609 (151-192)||(10-51)
[»] scaffold0544 (1 HSPs)
scaffold0544 (151-192)||(3010-3051)
[»] scaffold0535 (1 HSPs)
scaffold0535 (176-237)||(6148-6208)
[»] scaffold0352 (1 HSPs)
scaffold0352 (125-190)||(4478-4543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (151-192)||(150-191)
[»] scaffold0239 (1 HSPs)
scaffold0239 (176-237)||(14613-14673)
[»] scaffold0139 (1 HSPs)
scaffold0139 (151-192)||(16207-16248)
[»] scaffold0114 (1 HSPs)
scaffold0114 (176-237)||(41931-41991)
[»] scaffold0071 (1 HSPs)
scaffold0071 (176-237)||(51088-51148)
[»] scaffold0049 (1 HSPs)
scaffold0049 (126-191)||(43059-43124)


Alignment Details
Target: chr6 (Bit Score: 168; Significance: 4e-90; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 29615535 - 29615303
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||    
T  29615535 acatcaattgaaaatctaacaccttacaacatcaatgattattcaataggcataagtatttcataatcaacaacagtcatccaaatat-agaattcaatc 29615437  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacacc 214  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| |||| |||||||| ||||||||||||||||||  ||||| |||||||||||||    
T  29615436 aacaaatgcaactcatgaaatgacatgacatcccccttaatactccccaat-aatgcaactatgcatgtggtaccataa-ccagggccgtgacccacacc 29615339  T
Q  215 gctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  29615338 gctgtcgaatggttaaagcattctcatcaggaccta 29615303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 12167077 - 12167311
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| || ||||| || |||||||    
T  12167077 acatcaattgaaaatctagcaccttacaacatcaatgattattcaataagcataggtatttcataatcgacaacaatcattcaaatatagaa-ttcaatc 12167175  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccct-aatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacac 213  Q
    ||||| |||||||||||| |||||||||||  |||| | |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  12167176 aacaa-tgcaactcatgatatgacatgacacccccctttaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccatgacccacac 12167274  T
Q  214 cgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    | ||||||||||||||||||||||||| |||||||||    
T  12167275 cactgtcgaatggttaaagcattctcagcaggaccta 12167311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 19285986 - 19286220
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| || ||||| || |||||||    
T  19285986 acatcaattgaaaatctagcaccttacaacatcaatgattattcaataagcataggtatttcataatcgacaacaatcattcaaatatagaa-ttcaatc 19286084  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccct-aatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacac 213  Q
    ||||| |||||||||||| |||||||||||  |||| | |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  19286085 aacaa-tgcaactcatgatatgacatgacacccccctttaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccatgacccacac 19286183  T
Q  214 cgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    | ||||||||||||||||||||||||| |||||||||    
T  19286184 cactgtcgaatggttaaagcattctcagcaggaccta 19286220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 19877169 - 19877404
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||| || ||||| || |||||||    
T  19877169 acatcaattgaaaatctagcaccttacaacatcaatgattattcaataagcataggtatttcataatcgacatcaatcattcaaatatagaa-ttcaatc 19877267  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccct--aatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccaca 212  Q
    ||||| |||||||||||| |||||||||||  ||||||  |||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  19877268 aacaa-tgcaactcatgatatgacatgacaccccccctttaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccatgacccaca 19877366  T
Q  213 ccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    || ||||||||||||||||||||||||| |||||||||    
T  19877367 ccactgtcgaatggttaaagcattctcagcaggaccta 19877404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 19882945 - 19883180
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||| || ||||| || |||||||    
T  19882945 acatcaattgaaaatctagcaccttacaacatcaatgattattcaataagcataggtatttcataatcgacatcaatcattcaaatatagaa-ttcaatc 19883043  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccct--aatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccaca 212  Q
    ||||| |||||||||||| |||||||||||  ||||||  |||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  19883044 aacaa-tgcaactcatgatatgacatgacaccccccctttaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccatgacccaca 19883142  T
Q  213 ccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    || ||||||||||||||||||||||||| |||||||||    
T  19883143 ccactgtcgaatggttaaagcattctcagcaggaccta 19883180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 19787210 - 19786976
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| || ||||| || | |||||    
T  19787210 acatcaattgaaaatctagcaccttacaacatcaatgattattcaataagcataggtatttcataatcgacaacaatcattcaaatatagaa-tccaatc 19787112  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccct-aatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacac 213  Q
    ||||| |||||||||||| |||||||||||  |||| | |||||||||||||||||||||| ||||||||||||||||||||||||| | | ||||||||    
T  19787111 aacaa-tgcaactcatgatatgacatgacacccccctttaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccattacccacac 19787013  T
Q  214 cgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    | ||||||||||||||||||||||||| |||||||||    
T  19787012 cactgtcgaatggttaaagcattctcagcaggaccta 19786976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 23837418 - 23837654
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| ||||| ||||| || ||||||||| | |||  ||||||||||||||||||||||||||| | ||| || |  ||||    
T  23837418 acatcaattgaaaatctaacaccttacaatatcaaagagtattcaataagtatatttatttcataatcaacaacaatcatccata-atagaattcaaatc 23837516  T
Q  115 aacaaa-tgcaactcatgaaatgacatgacattcccc-ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccaca 212  Q
    |||||| |||||| ||||  |||||| ||||| ||   |||||| ||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||    
T  23837517 aacaaaatgcaacccatgttatgacacgacatccctatctaatattcctcaataaatgtaattatgcatgtggtaccataattcagggccgtgacccaca 23837616  T
Q  213 ccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||||||||||||| |||||||||    
T  23837617 ccgctgtcgaatggttaaagcattctcaacaggaccta 23837654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 25471028 - 25470794
Alignment:
Q  16 catcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatca 115  Q
    |||||||||||||||||||||| ||||  ||||| |||||||||||| |||||   |||| |||||||||| || |||| ||  ||    ||| || |||    
T  25471028 catcaactgaaaatctaacaccttacagtatcaaagattattcaataagcatagtcattttataatcaacatcattcattca--taatggaatccagtca 25470931  T
Q  116 acaaa-tgcaactcatgaaatgacatgacattcccc-ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacac 213  Q
    ||||| |||||||||||  |||||| ||||| |||  |||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  25470930 acaaaatgcaactcatgttatgacacgacatccccatctaatactcctcaataaatgcaaatatgcatgtggtaccataattcagggccgtgacccacac 25470831  T
Q  214 cgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||||||||||| |||||||||    
T  25470830 cgctgtcgaatggttaaagcattctcagcaggaccta 25470794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 21566474 - 21566298
Alignment:
Q  65 cataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaactcatgaaatgacatgacattccccctaatactcctcaa 164  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| |||||||   ||||||||| || |||||||||  ||| |||| ||||||| |    
T  21566474 cataagtatttcataatcaacaacaatcatccagatatagcaattcagtcaacaacaacaactcatgtaaagacatgaca-cccctctaagactcctcga 21566376  T
Q  165 taaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatca 243  Q
    |||||||||| ||||| |||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  21566375 taaatgcaactatgcacgtggtaccat-attcagggccgtgacccacaccgttgtcgaatggttaaagcattctcatca 21566298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 34641315 - 34641081
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| ||||| ||||| |||||||||||| |||||| ||||| || |||||||||| |||| ||  ||  | ||| || ||    
T  34641315 acatcaattgaaaatctaacaccttacaatatcaaagattattcaataagcataattattt-atcatcaacaacagtcattca--taatagaatccattc 34641219  T
Q  115 aacaaa-tgcaactcatgaaatgacatgacattcccc-ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccaca 212  Q
    |||||| |||||||||||  |||||| ||||| |||  |||  ||||||||||||||||||  |||||||||||||| |||||||||| ||||||||||     
T  34641218 aacaaaatgcaactcatgttatgacacgacatccccatctagaactcctcaataaatgcaaatatgcatgtggtaccgtaattcagggccgtgacccact 34641119  T
Q  213 ccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||||||||||||| |||||||||    
T  34641118 ccgctgtcgaatggttaaagcattctcaacaggaccta 34641081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 34647989 - 34647755
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| ||||| ||||| |||||||||||| |||||| ||||| || |||||||||| |||| ||  ||  | ||| || ||    
T  34647989 acatcaattgaaaatctaacaccttacaatatcaaagattattcaataagcataattattt-atcatcaacaacagtcattca--taatagaatccattc 34647893  T
Q  115 aacaaa-tgcaactcatgaaatgacatgacattcccc-ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccaca 212  Q
    |||||| |||||||||||  |||||| ||||| |||  |||  ||||||||||||||||||  |||||||||||||| |||||||||| ||||||||||     
T  34647892 aacaaaatgcaactcatgttatgacacgacatccccatctagaactcctcaataaatgcaaatatgcatgtggtaccgtaattcagggccgtgacccact 34647793  T
Q  213 ccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||||||||||||| |||||||||    
T  34647792 ccgctgtcgaatggttaaagcattctcaacaggaccta 34647755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 18799238 - 18799425
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    |||||||||| | |||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||  ||||||||||||||    |||    
T  18799238 aatctaacactcaacaatatcaatgattattcaatacgcataagtatttcataatcaacaataatcatccagatatagcaattcaatcaacaataataac 18799337  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct 217  Q
    ||||| |||||||||||   ||| |||| ||||||| | ||||||||| |||||||||||||||| |||||||| ||||||||||||||||    
T  18799338 tcatg-aatgacatgac-gcccctctaagactcctcgaaaaatgcaactatgcatgtggtaccat-attcagggccgtgacccacaccgct 18799425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 11284184 - 11283984
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| ||||| ||||| |||||||||||| |||||  ||||||||||||||||||||||||||| | ||| ||    ||||    
T  11284184 acatcaattgaaaatctaacaccttacaatatcaaagattattcaataagcatagttatttcataatcaacaacaatcatccata-atagaatccaaatc 11284086  T
Q  115 aac-aaatgcaactcatgaaatgacatgacattccc-cctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccaca 212  Q
    ||| ||||||||| ||||  |||||| ||||| |||  |||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  11284085 aacaaaatgcaacccatgttatgacacgacatccccatctaatactcctcaataaatgcaattatgcatgtggtaccataattcagggccgtgacccaca 11283986  T
Q  213 cc 214  Q
    ||    
T  11283985 cc 11283984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 18788258 - 18788445
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    |||||||||| | |||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||  ||||||||||||||    |||    
T  18788258 aatctaacactcaacaatatcaatgattattcaataagaataagtatttcataatcaacaaaaatcatccagatatagcaattcaatcaacaataataac 18788357  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct 217  Q
    ||||| |||||||||||   | | |||| ||||||| | ||||||||| || ||||||||||||| |||||||| ||||||||||||||||    
T  18788358 tcatg-aatgacatgac-gccactctaagactcctcgaaaaatgcaactatacatgtggtaccat-attcagggccgtgacccacaccgct 18788445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 24562262 - 24562355
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24562262 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 24562355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 28290409 - 28290314
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28290409 ctaagactcctcaacaaatgcaactatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 28290314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 12941775 - 12941870
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12941775 ctaagactcctcaacaaatgaaactatgcatgtggtaccaaaat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 12941870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 33682380 - 33682309
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33682380 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 33682309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 14033142 - 14033213
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14033142 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 14033213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 23835057 - 23835128
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  23835057 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 23835128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 27562715 - 27562644
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||||||||||||||  | |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  27562715 atgcatgtggtaccaagaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 27562644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 28360032 - 28359961
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| |||||||||||||  |||||||||||||||||||||||| ||||||    
T  28360032 atgcatgtggtaccaaaaatcagggccgtgacccacacctttgtcgaatggttaaagcattctcaacaggac 28359961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 5290339 - 5290259
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||  |||||||||||||||| |||||||| |||  ||| ||||||||| |||||||||||||||||    
T  5290339 actcctcaataaatgcaaatatgcatgtggtaccat-attcagggacgtagccctcaccgctgtagaatggttaaagcattc 5290259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 247
Target Start/End: Complemental strand, 24514135 - 24513934
Alignment:
Q  45 atcaatgattattcaataggcataagtatttcataatcaacaacaatcatcca-gatataaaaattcaatcaacaaatgcaactcatgaaatgacatgac 143  Q
    |||||||||||||||||| |||||| |||||||||||||||||| |||||| |  ||| || ||| ||||||||||   | ||||||| |||| ||||||    
T  24514135 atcaatgattattcaatatgcataaatatttcataatcaacaac-atcatcaataatacaacaatacaatcaacaacaacgactcatgtaatggcatgac 24514037  T
Q  144 attccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaatggttaaagcattctcatc 242  Q
    |      |||| ||||||| | ||||||||  |||||||||||||||| |||||||| ||   ||| |||||||  ||||||||||||||||||||  ||    
T  24514036 aacattactaagactcctcgacaaatgcaa-tatgcatgtggtaccat-attcagggccggagccctcaccgctattcgaatggttaaagcattcttttc 24513939  T
Q  243 aggac 247  Q
    |||||    
T  24513938 aggac 24513934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 25347065 - 25347154
Alignment:
Q  159 cctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||| ||||||||| |||||||||||||||||| |||||||||   ||| |||||||| | |||||||||||||||  |||||||||||||    
T  25347065 cctcaaaaaatgcaactatgcatgtggtaccataa-tcagggtcgaagccctcaccgctgtttgaatggttaaagcat--tcatcaggaccta 25347154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 15457440 - 15457525
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    |||| ||||||||| ||||||||| |||||||||||||||||  |||||| ||   ||| ||||| | | ||||||||||||||||||    
T  15457440 ctaagactcctcaacaaatgcaactatgcatgtggtaccata--tcagggccgaagccctcaccgttatagaatggttaaagcattct 15457525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 15464035 - 15464120
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    |||| ||||||||| ||||||||| |||||||||||||||||  |||||| ||   ||| ||||| | | ||||||||||||||||||    
T  15464035 ctaagactcctcaacaaatgcaactatgcatgtggtaccata--tcagggccgaagccctcaccgttatagaatggttaaagcattct 15464120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 20011141 - 20011099
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataa 193  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  20011141 ctaagactcctcaacaaatgcaactatgcatgtggtaccataa 20011099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 25395848 - 25395910
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaaca 89  Q
    |||||||||||||| || |||||||||||| |||||  ||||  ||| |||||||||||||||    
T  25395848 aatctaacaccctaaaatatcaatgattatccaatatacatatatatctcataatcaacaaca 25395910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 1592759 - 1592819
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||| ||| ||||  |||  ||| |||||||||||||||||||||||||||    
T  1592759 atgcatgtggtaccaaaat-caggaccgtagccctcaccgctgtcgaatggttaaagcattc 1592819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 19472555 - 19472490
Alignment:
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtacca 190  Q
    ||||||| |||||||||||| | || |||| || |||||| |||||| || |||||||||||||||    
T  19472555 actcatgcaatgacatgacaatacctctaagacccctcaacaaatgcgactatgcatgtggtacca 19472490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 19726606 - 19726666
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  19726606 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 19726666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 29416643 - 29416583
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||| |||| ||||||  ||| ||| ||||| |||||||||||||||||    
T  29416643 atgcatgtggtaccata-ttcaaggtcgtagccctcacagctgtagaatggttaaagcattc 29416583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 14582035 - 14581974
Alignment:
Q  175 aatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    |||||||||||||||||||  ||||| || | ||| ||||||| | ||||||||||||||||||    
T  14582035 aatgcatgtggtaccataa--cagggccgaggccctcaccgctatagaatggttaaagcattct 14581974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 25749559 - 25749619
Alignment:
Q  29 tctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaaca 89  Q
    |||||||||||| || | |||| |||||||||||  ||||  |||||||||||||||||||    
T  25749559 tctaacaccctaaaataacaataattattcaatatacatatatatttcataatcaacaaca 25749619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 2418 - 2639
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||  |||||    
T  2418 aatctaacaccctacaatatccatgattattcaataggcataagtatttcataatcaacaacaatcatccagatatagcaatttgatcaacaatagcaac 2517  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||||||||||||||||  ||| |||| ||||||| ||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  2518 tcatgaaatgacatgaca-ccccactaagactcctcgataaatgcaactatgcatgtggtaccataa-tcagggccgtgacccacaccgctgtcgaatgg 2615  T
Q  227 ttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||||||||    
T  2616 ttaaagcattctcatcaggaccta 2639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 29600 - 29818
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||  ||||    
T  29600 aatctaacaccctacaatatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccaaatatagcaattcaatcaacaaaaacaac 29699  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||| ||||||||||||  ||| |||| ||||||||||||||||||| |||||||||||||||||| |||||| ||| |||||||||| ||||||||||    
T  29700 tcatgtaatgacatgaca-cccctctaagactcctcaataaatgcaactatgcatgtggtaccataa-tcagggccgtaacccacaccgttgtcgaatgg 29797  T
Q  227 ttaaagcattctcatcaggac 247  Q
    |||||||||||||||||||||    
T  29798 ttaaagcattctcatcaggac 29818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 148; Significance: 3e-78; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 174900 - 174665
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| |||||||||| ||||  ||||||||||||||||||||| ||||||||  |||| |||||||| | |||||||||| | |||  |||||||||    
T  174900 acatcaattgaaaatctagcacctaacaacatcaatgattattcaacaggcataaccattttataatcaaaagcaatcatccacaaatagtaattcaatc 174801  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacacc 214  Q
     |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||  || |||||||||||||    
T  174800 gacaaatgcaactcatgaaatgacatgacatcccccctaattctcctcaataaatgcaactatgcatgtggtaccataattcttggccgtgacccacacc 174701  T
Q  215 gctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||||||||||| |||||||||    
T  174700 gctgtcgaatggttaaagcattctcaacaggaccta 174665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 488967 - 489201
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||  ||| | |||||||||    
T  488967 acatcaattgaaaatctaacaccttacaacatcaatgattattcaataaacataggtatttcataatcaacaacaatcatccaagtat-agaattcaatc 489065  T
Q  115 aacaaatgcaactcatgaaatgacatgacattc-cccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacac 213  Q
    |||||||||||||||||  ||||||  |||  | ||| |||||||||||||| |||| ||  ||||||||||||||||||||||||| | |||||||||     
T  489066 aacaaatgcaactcatgttatgacacaacaccctcccttaatactcctcaat-aatgtaattatgcatgtggtaccataattcagggccatgacccacaa 489164  T
Q  214 cgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    | ||||||||||||||||||||||||| |||||||||    
T  489165 cactgtcgaatggttaaagcattctcaacaggaccta 489201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 494159 - 494074
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    |||| ||||||||| ||||||||| |||||||||||||||||  |||||| || | ||| ||||| | | ||||||||||||||||||    
T  494159 ctaagactcctcaacaaatgcaactatgcatgtggtaccata--tcagggccggggccctcaccgttatagaatggttaaagcattct 494074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 145; Significance: 2e-76; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 110598 - 110832
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||  |||| || |||||||    
T  110598 acatcaattgaaaatctaacaccttacaacatcaatgattattcaataagcataggtatttcataatcaacatccatcatccaagtatagaa-ttcaatc 110696  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccct-aatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacac 213  Q
    |||||||||||||||||| |||||| ||||  |||||| ||||||||||||||| |||||  ||||||||||||||||||||||||| ||||||||||||    
T  110697 aacaaatgcaactcatgatatgacacgacacccccccttaatactcctcaataa-tgcaattatgcatgtggtaccataattcagggccgtgacccacac 110795  T
Q  214 cgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||||||||||| |||||||||    
T  110796 cgctgtcgaatggttaaagcattctcaacaggaccta 110832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 238
Target Start/End: Original strand, 116633 - 116855
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||   ||| | ||| |||||    
T  116633 acatcaattgaaaatctaacaccttacaacatcaatgattattcaataagcataggtatttcataatcaacatccatcatcccagtat-agaatccaatc 116731  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccc-taatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacac 213  Q
    |||||||||||||||||| |||||| ||||  ||||| |||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||||||||    
T  116732 aacaaatgcaactcatgatatgacacgacacccccccttaatactcctcaat-aatgcaattatgcatgtggtaccataattcagggccgtgacccacac 116830  T
Q  214 cgctgtcgaatggttaaagcattct 238  Q
    || ||||||||||||||||||||||    
T  116831 cgttgtcgaatggttaaagcattct 116855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 8047244 - 8047000
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||| | |||||||||    
T  8047244 acatcaattgaaaatctaacaccttacaacatcaatgattattcaataagcataggtatttcataatcaacaacaatcatccaaatat-agaattcaatc 8047146  T
Q  115 aacaaatgcaactcatgaaatgacatgaca-----------ttccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcg 203  Q
    ||||||||||||||||||||||||| ||||             ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||    
T  8047145 aacaaatgcaactcatgaaatgacacgacacccccccccccccccccctaatactcctcaat-aatgcaactatgcatgtggtaccataattcagggccg 8047047  T
Q  204 tgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  8047046 tgacccacaccgctgtcgaatggttaaagcattctcaacaggaccta 8047000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 11846905 - 11847126
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||  |||||    
T  11846905 aatctaacaccctacaatatccatggttattcaataggcataagtatttcataatcaacaacaatcatccagatatagcaattcgatcaacaatagcaac 11847004  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||||||||||||||||  ||| |||| ||||||| ||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  11847005 tcatgaaatgacatgaca-ccccactaagactcctcgataaatgcaactatgcatgtggtaccataa-acagggccgtgacccacaccgctgtcgaatgg 11847102  T
Q  227 ttaaagcattctcatcaggaccta 250  Q
    |||||||||||||| |||||||||    
T  11847103 ttaaagcattctcaacaggaccta 11847126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 15406764 - 15406928
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||   ||||    
T  15406764 aatctaacaccctacaatatcaatgattattctatatgcataagtatttcataatcaacaac-atcatccagatatagcaattcaaccaacaacaacaac 15406862  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    ||||| ||||||||||||   || |||| ||||||  | ||||||| | |||||||||||||||||    
T  15406863 tcatgtaatgacatgacaacacctctaagactccttgacaaatgcagctatgcatgtggtaccata 15406928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 18212128 - 18212208
Alignment:
Q  166 aaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18212128 aaatgcaactatgcatgtggtaccata-ttcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 18212208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 15533761 - 15533856
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||| ||||| ||||||||||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  15533761 ctaagactcctcaacaaaagcaactatgcatgtggtaccaaaat-cagggccgtgacccacaccactgtcgaatggttaaagcattctcatcaggac 15533856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 635940 - 635869
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  635940 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 635869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 53748927 - 53748856
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  53748927 atgcatgtggtaccataaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 53748856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 41800128 - 41800057
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  41800128 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 41800057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 42701226 - 42701297
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  42701226 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 42701297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 51602249 - 51602178
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  51602249 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 51602178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 51608130 - 51608059
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  51608130 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 51608059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 14485362 - 14485526
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    |||||||||||||| || |||||||||||||||||| |||||| |||||||||||||||||| | |||| | |||||  ||||||| ||||||   | ||    
T  14485362 aatctaacaccctaaaatatcaatgattattcaatatgcataaatatttcataatcaacaac-accatcaaaatatagcaattcaaccaacaacaacgac 14485460  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    ||||| | ||||||||||   || |||| ||||||| |||| | | || |||| ||||||||||||    
T  14485461 tcatgcattgacatgacaacacctctaagactcctcgataattacgactatgcttgtggtaccata 14485526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 14910560 - 14910646
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    |||| ||| ||||| ||||||||| |||||||||||||||||| |||||| ||   ||| ||||||| | ||||||||||||||||||    
T  14910560 ctaagactactcaacaaatgcaactatgcatgtggtaccataa-tcagggccggagccctcaccgctatagaatggttaaagcattct 14910646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 4831265 - 4831205
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||| ||||||| |||  ||| ||||||||| |||||||||||||||||    
T  4831265 atgcatgtggtaccata-ttcagggccgtagccctcaccgctgtagaatggttaaagcattc 4831205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 4834560 - 4834500
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||| ||||||| |||  ||| ||||||||| |||||||||||||||||    
T  4834560 atgcatgtggtaccata-ttcagggccgtagccctcaccgctgtagaatggttaaagcattc 4834500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 10977242 - 10977182
Alignment:
Q  132 aaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||||||||||||   || |||| |||||||||||||||| || |||||||||||||||||    
T  10977242 aaatgacatgacaacaccactaagactcctcaataaatgcgactatgcatgtggtaccata 10977182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 11171440 - 11171375
Alignment:
Q  171 caacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    |||| |||||||| |||||||||| |||||||||  ||| |||||| || |||||||||||||||||    
T  11171440 caaccatgcatgtagtaccataat-cagggtcgtagccctcaccgccgtagaatggttaaagcattc 11171375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 13452206 - 13452287
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattc 237  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||| ||   ||| |||||||| | |||||||||||||||||    
T  13452206 actcctcaacaaatgcaaatatgcatgtggtaccat-attcagggccgaagccctcaccgctgtttgaatggttaaagcattc 13452287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 13886615 - 13886680
Alignment:
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtacca 190  Q
    ||||||| |||||| |||||   ||||||| ||||||||| |||||| || |||||||||||||||    
T  13886615 actcatgcaatgacttgacaacacccctaagactcctcaacaaatgcgactatgcatgtggtacca 13886680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 26077891 - 26077828
Alignment:
Q  175 aatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattct 238  Q
    |||||||||||||||||||| ||||||||   ||| |||||||  ||||||||||||||||||||    
T  26077891 aatgcatgtggtaccataat-cagggtcgaagccctcaccgctaatcgaatggttaaagcattct 26077828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 17190688 - 17190906
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||   ||||    
T  17190688 aatctaacaccctacaataacaatgattattcaataggcataagtatttcataatcaacaacaatcatccagttatagcaattcaatcaacaataacaac 17190787  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||| ||||||||||||  ||| |||| ||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  17190788 tcatgtaatgacatgaca-cccctctaagactcctcaataaatgcaactatgcatgtggtacca-aattcagggccgtgacccacaccgttgtcgaatgg 17190885  T
Q  227 ttaaagcattctcatcaggac 247  Q
    |||||||||||||||||||||    
T  17190886 ttaaagcattctcatcaggac 17190906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 24191614 - 24191832
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||   ||||    
T  24191614 aatctaacaccctacaataacaatgattattcaataggcataagtatttcataatcaacaacaatcatccagttatagcaattcaatcaacaataacaac 24191713  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||| ||||||||||||  ||| |||| ||||||||||||||||||| |||||||||||||| | |||| ||| |||||||||||||||||||||||||    
T  24191714 tcatgtaatgacatgaca-cccctctaagactcctcaataaatgcaactatgcatgtggtaccgt-attcggggccgtgacccacaccgctgtcgaatgg 24191811  T
Q  227 ttaaagcattctcatcaggac 247  Q
    |||||||||||||||||||||    
T  24191812 ttaaagcattctcatcaggac 24191832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 16802774 - 16802556
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||| |   ||||    
T  16802774 aatctaacaccctacaatatcaatgattattcaataggcataagtatttcataatcagcaacaatcatccagatatagcaattcaatcaacgacaacaac 16802675  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||| ||||||||||||  | | |||| ||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  16802674 tcatgtaatgacatgaca-cctctctaagactcctcgataaatgcaactatgcatgtggtaccat-attcagggccgtgacccacaccgctgtcgaatgg 16802577  T
Q  227 ttaaagcattctcatcaggac 247  Q
    ||||| |||||||||||||||    
T  16802576 ttaaaacattctcatcaggac 16802556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 17156913 - 17157131
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||  ||||||||||||||   ||||    
T  17156913 aatctaacaccctacaataacaatgattattcaataggcaaaagtatttcataatcaacaacaataatccagttatagcaattcaatcaacaataacaac 17157012  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||| ||||||||||||  ||| |||| ||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  17157013 tcatgtaatgacatgaca-cccctctaagactcctcaataaatgcaactatgcatgtggtaccgt-attcagggccgtgacccacaccgctgtcgaatgg 17157110  T
Q  227 ttaaagcattctcatcaggac 247  Q
    |||||||||||||||||||||    
T  17157111 ttaaagcattctcatcaggac 17157131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 41456487 - 41456251
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| ||||| ||||| |||||||||||| | |||  ||||||||||||||||||||||||||| | ||| || |  ||||    
T  41456487 acatcaattgaaaatctaacaccttacaatatcaaagattattcaataagtatagttatttcataatcaacaacaatcatccata-atagaattcaaatc 41456389  T
Q  115 aacaaa-tgcaactcatgaaatgacatgacattcccc-ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccaca 212  Q
    |||||| |||||| ||||  |||||| ||||| |||  |||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||    
T  41456388 aacaaaatgcaacccatgttatgacacgacatccccatctaatactcctcaataaatgcaattatgcatgtggtaccataattcagggccatgacccaca 41456289  T
Q  213 ccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||||||||||||| |||||||||    
T  41456288 ccgctgtcgaatggttaaagcattctcagcaggaccta 41456251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 9532809 - 9532923
Alignment:
Q  136 gacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcat 235  Q
    |||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9532809 gacatgacctcccccataatactcctcaataaatgcaactatgcatgtggtaccataattcagggccgtgacccacaccgctgtcgaatggttaaagcat 9532908  T
Q  236 tctcatcaggaccta 250  Q
    ||||| |||||||||    
T  9532909 tctcaacaggaccta 9532923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 8583491 - 8583398
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8583491 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 8583398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 14084511 - 14084604
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14084511 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 14084604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 14089912 - 14090005
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14089912 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 14090005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 13969029 - 13968937
Alignment:
Q  157 ctcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13969029 ctcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 13968937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 13974504 - 13974412
Alignment:
Q  157 ctcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13974504 ctcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 13974412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 24123400 - 24123307
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24123400 actcctcaataaatgcaaatatgcacgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 24123307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 49399453 - 49399546
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49399453 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcaccaggaccta 49399546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 17244006 - 17243786
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccaga-tataaaaattcaatcaacaaatgcaa 125  Q
    |||||||||||||| || ||||||||| |||| ||| ||||||||||||||||||||||||||  |||| | | ||||  ||||||| ||||||   | |    
T  17244006 aatctaacaccctaaaatatcaatgatgattctatatgcataagtatttcataatcaacaacac-catcaataatatagcaattcaaccaacaacaacga 17243908  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaat 224  Q
    || ||| ||||||||||||   || |||| ||||||| | ||||||||| |||||||||||||||| |||||||||||   ||| ||||||| |||||||    
T  17243907 ctgatgcaatgacatgacaacacctctaagactcctcgacaaatgcaactatgcatgtggtaccat-attcagggtcggagccctcaccgctagtcgaat 17243809  T
Q  225 ggttaaagcattctcatcaggac 247  Q
    ||||||||||||||  |||||||    
T  17243808 ggttaaagcattcttttcaggac 17243786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 4677164 - 4677235
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  4677164 atgcatgtggtaccataaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 4677235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 8743086 - 8743015
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  8743086 atgcatgtggtaccaaaattcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 8743015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 8761256 - 8761185
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  8761256 atgcatgtggtaccaaaattcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 8761185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 13909529 - 13909600
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13909529 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 13909600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 13939988 - 13940059
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13939988 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 13940059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 13946474 - 13946545
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13946474 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 13946545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 41175477 - 41175548
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  41175477 atgcatgtggtaccataaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 41175548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 41180615 - 41180686
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  41180615 atgcatgtggtaccataaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 41180686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 12304724 - 12304819
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| ||| |||||||| || ||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  12304724 ctaagactcctcaacaaatgcaactatgtatgtggtatcaaaat-cagggccgtgacccacaccgttgtcgaatggttaaagcattctcatcaggac 12304819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 12200203 - 12200273
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12200203 atgcatgtggtaccaaaat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 12200273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 93 - 236
Target Start/End: Original strand, 23174076 - 23174218
Alignment:
Q  93 atccagatataaaaattcaatcaacaaatgcaactcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||||||||||  | ||||||||||||  |||||||||| ||||||||||||   || |||| ||||||| | ||||||||| ||||||||||||||||     
T  23174076 atccagatatagcagttcaatcaacaacagcaactcatgtaatgacatgacaacacctctaagactcctcgacaaatgcaactatgcatgtggtaccat- 23174174  T
Q  193 attcagggtcgtgacccacaccgctgtcgaatggttaaagcatt 236  Q
     |||| |  |||  ||||||||||||||||||||||||||||||    
T  23174175 gttcaagaccgtagcccacaccgctgtcgaatggttaaagcatt 23174218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 44775201 - 44775272
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  44775201 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 44775272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 44780385 - 44780456
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  44780385 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 44780456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 18913857 - 18914022
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatcca-gatataaaaattcaatcaacaaatgcaa 125  Q
    |||||||||||||| || |||||||||||||||||| ||||| ||||||||||||||||||||| |||| |  | |||  ||||||| ||||||   | |    
T  18913857 aatctaacaccctaaaatatcaatgattattcaatatgcatacgtatttcataatcaacaacaa-catcaataacatagcaattcaaccaacaacaacga 18913955  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||||| | ||||||||||   || |||| ||||||| | ||||||||| |||||||||||||||||    
T  18913956 ctcatgcattgacatgacaacacctctaagactcctcgacaaatgcaactatgcatgtggtaccata 18914022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 11850860 - 11850780
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||  |||||||||||||||| |||||||| |||  ||| ||||||||| |||||||||||||||||    
T  11850860 actcctcaataaatgcaattatgcatgtggtaccat-attcagggccgtagccctcaccgctgtagaatggttaaagcattc 11850780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 18888941 - 18889037
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| |||||||||||||||| |||||||| ||   ||| |||||||  ||||||||||||||||||||  |||||||    
T  18888941 ctaagactcctcaacaaatgcaactatgcatgtggtaccat-attcagggccggagccctcaccgctaatcgaatggttaaagcattcttttcaggac 18889037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 31690794 - 31690712
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaatggttaaagcattct 238  Q
    ||||||||||||||||||  |||||||||||||||| |||||||| ||   ||| |||||||  ||||||||||||||||||||    
T  31690794 actcctcaataaatgcaaatatgcatgtggtaccat-attcagggccgaagccctcaccgctaatcgaatggttaaagcattct 31690712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 23173786 - 23173846
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    ||||||||||||||||| |||||||| || |||| |||| |||||||||||||||||||||||    
T  23173786 atgcatgtggtaccata-ttcagggt-gtaaccctcacctctgtcgaatggttaaagcattct 23173846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 14544370 - 14544307
Alignment:
Q  174 caatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    ||||||||||||||||||||| ||||  |||  ||| ||||| ||||||||||||||||||||||    
T  14544370 caatgcatgtggtaccataat-caggaccgtagccctcaccgttgtcgaatggttaaagcattct 14544307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 14864763 - 14864805
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataa 193  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  14864763 ctaagactcctcaacaaatgcaactatgcatgtggtaccataa 14864805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 17130672 - 17130714
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataa 193  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  17130672 ctaagactcctcaacaaatgcaactatgcatgtggtaccataa 17130714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 18899980 - 18900065
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaatggttaaagcatt 236  Q
    |||| ||||||||| ||||||||| |||||||||||||||| |||||||| |    ||| |||||||  ||||||||||||||||||    
T  18899980 ctaagactcctcaacaaatgcaactatgcatgtggtaccat-attcagggccagagccctcaccgctaatcgaatggttaaagcatt 18900065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 10553848 - 10553889
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  10553848 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 10553889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 14652892 - 14652832
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  14652892 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 14652832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 14764332 - 14764291
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  14764332 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 14764291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 23372078 - 23372037
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  23372078 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 23372037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 34852386 - 34852326
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||| ||||||| |||  ||| ||||| ||| |||||||||||||||||    
T  34852386 atgcatgtggtaccata-ttcagggccgtagccctcaccgttgtagaatggttaaagcattc 34852326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 38312352 - 38312311
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  38312352 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 38312311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 51300077 - 51300118
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  51300077 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 51300118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 20249333 - 20249297
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  20249333 actcctcaacaaatgcaaccatgcatgtggtaccata 20249297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 30597067 - 30597011
Alignment:
Q  134 atgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtacca 190  Q
    |||||||||||   || |||| ||||||||||||||||||  |||||||||||||||    
T  30597067 atgacatgacaacaccactaagactcctcaataaatgcaattatgcatgtggtacca 30597011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 23102783 - 23102565
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| |||||||   ||||    
T  23102783 aatctaacaccctacaatatcaatgattattcaataggcataagtattccataatcaacaacaatcatccagatatagcaattcagtcaacaacaacaac 23102684  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||| ||||||||||||  ||| |||| ||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  23102683 tcatgtaatgacatgaca-cccctctaagactcctcgataaatgcaactatgcatgtggtaccat-attcagggccgtgacccacaccgctgtcgaatgg 23102586  T
Q  227 ttaaagcattctcatcaggac 247  Q
    |||||||||||||||||||||    
T  23102585 ttaaagcattctcatcaggac 23102565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 26582514 - 26582748
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataag-tatttcataatcaacaacaatcatccagatataaaaattcaat 113  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||||| ||||| || || | |    
T  26582514 acatcaattgaaaatctaacaccttacaacatcaataattattcaataagcatatggtatttcataatcaacaacaatcatccaaatatagaattt-agt 26582612  T
Q  114 caacaaatgcaactcatgaaatgacatgacattccccc-taatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccaca 212  Q
    |||||| |||||||||||| |||||| ||| | ||||| |||||||| |||||||||||||| ||||||||||||||||||  ||||| |||||||||||    
T  26582613 caacaa-tgcaactcatgatatgacacgacttccccccctaatactcttcaataaatgcaactatgcatgtggtaccataac-cagggccgtgacccaca 26582710  T
Q  213 ccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26582711 ccgctgtcgaatggttaaagcattctcatcaggaccta 26582748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 23169623 - 23169402
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatc-aacaacaatcatccagatataaaaattcaatcaacaaatgcaa 125  Q
    ||||||||||||||||| |||||| |||||||||||||||||  |||||||||| | |||||||| ||||||||||||  ||| ||||||||||  ||||    
T  23169623 aatctaacaccctacaaaatcaataattattcaataggcatagatatttcataaaccaacaacaaccatccagatatagcaat-caatcaacaatagcaa 23169525  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatg 225  Q
    |||||||||||||||||||  |||  ||| ||||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  23169524 ctcatgaaatgacatgacac-ccctataagactcctcgataaatgcaactatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatg 23169427  T
Q  226 gttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||||||||||    
T  23169426 gttaaagcattctcatcaggaccta 23169402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 23580880 - 23580659
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatc-aacaacaatcatccagatataaaaattcaatcaacaaatgcaa 125  Q
    ||||||||||||||||| |||||| |||||||||||||||||  |||||||||| | |||||||| ||||||||||||  ||| ||||||||||  ||||    
T  23580880 aatctaacaccctacaaaatcaataattattcaataggcatagatatttcataaaccaacaacaaccatccagatatagcaat-caatcaacaatagcaa 23580782  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatg 225  Q
    |||||||||||||||||||  |||  ||| ||||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  23580781 ctcatgaaatgacatgacac-ccctataagactcctcgataaatgcaactatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatg 23580684  T
Q  226 gttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||||||||||    
T  23580683 gttaaagcattctcatcaggaccta 23580659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 76 - 247
Target Start/End: Complemental strand, 23090306 - 23090137
Alignment:
Q  76 cataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaactcatgaaatgacatgacattccccctaatactcctcaataaatgcaaca 175  Q
    ||||||||||||||||||||||||||||  |||||| |||||||   ||||||||| ||||||||||||  ||| |||| ||||||| |||||||||||     
T  23090306 cataatcaacaacaatcatccagatatagcaattcagtcaacaacaacaactcatgtaatgacatgacac-ccctctaagactcctcgataaatgcaact 23090208  T
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23090207 atgcatgtggtaccata-ttcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 23090137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 5707351 - 5707117
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| ||||| ||||| |||||||||||| |||||| ||||| || |||||||||| |||| ||  ||  | ||| |||||    
T  5707351 acatcaattgaaaatctaacaccttacaatatcaaagattattcaataagcataattattt-atcatcaacaacagtcattca--taatagaatccaatc 5707255  T
Q  115 aacaaa-tgcaactcatgaaatgacatgacattcccc-ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccaca 212  Q
    |||||| |||||||||||  |||||| ||||| |||  |||  ||||||||||||||||||  |||||||||||||| |||||||||| |||||||||||    
T  5707254 aacaaaatgcaactcatgttatgacacgacatccccatctagaactcctcaataaatgcaaatatgcatgtggtaccgtaattcagggccgtgacccaca 5707155  T
Q  213 ccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||||||||||||| |||||||||    
T  5707154 ccgctgtcgaatggttaaagcattctcaacaggaccta 5707117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 6482281 - 6482395
Alignment:
Q  136 gacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcat 235  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6482281 gacatgacattccccctaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccgtgacccacaccgctgtcgaatggttaaagcat 6482380  T
Q  236 tctcatcaggaccta 250  Q
    ||||| |||||||||    
T  6482381 tctcaacaggaccta 6482395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 6485748 - 6485862
Alignment:
Q  136 gacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcat 235  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6485748 gacatgaccttccccctaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccgtgacccacaccgctgtcgaatggttaaagcat 6485847  T
Q  236 tctcatcaggaccta 250  Q
    ||||| |||||||||    
T  6485848 tctcaacaggaccta 6485862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 23877690 - 23877909
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccaga-tataaaaattcaatcaacaaatgcaa 125  Q
    |||||| ||||||| || ||||||| || ||| |||  |||||||||||||||| |||||||| ||||| | | |||||  |||||| ||||||   | |    
T  23877690 aatctagcaccctaaaatatcaatgctt-ttccatatacataagtatttcataaacaacaaca-tcatcaacaatataacgattcaaccaacaacaacga 23877787  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatg 225  Q
    |||||| ||||||||||||   || |||| ||||| | | || |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23877788 ctcatgcaatgacatgacaacacctctaagactccccgacaattgcaactatgcatgtggtaccatatttcagggtcgtgacccacaccgctgtcgaatg 23877887  T
Q  226 gttaaagcattctcatcaggac 247  Q
    ||||||||||| ||||||||||    
T  23877888 gttaaagcattatcatcaggac 23877909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 9241308 - 9241403
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9241308 ctaagactcctcaacaaatgcaactatgcatgtggtaccataat-cagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 9241403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 200621 - 200714
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  200621 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 200714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 43693381 - 43693474
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43693381 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgttgtcgaatggttaaagcattctcatcaggaccta 43693474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 27367779 - 27367687
Alignment:
Q  157 ctcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||| ||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27367779 ctcctcgataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 27367687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 6744519 - 6744428
Alignment:
Q  158 tcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6744519 tcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaaacattctcatcaggaccta 6744428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 10685826 - 10685731
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10685826 ctaagactcctcaacaaatgcaactatgcatgtggtaccaaaat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 10685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 21907099 - 21907319
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatcca-gatataaaaattcaatcaacaaatgcaa 125  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||| |||||| |  |||||  ||||||| |||| |   | |    
T  21907099 aatctaacaccctaaaatatcaatgattattcaatatgcataagtatttcataatcaacaac-atcatcaataatatagcaattcaaccaactacaacga 21907197  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaat 224  Q
    |||||| ||||||||||||   || |||| ||||||| | ||||||||| |||||||||||||||| |||||||| ||   ||| |||||||  ||||||    
T  21907198 ctcatgcaatgacatgacaacacctctaagactcctcgacaaatgcaactatgcatgtggtaccat-attcagggccggagccctcaccgctaatcgaat 21907296  T
Q  225 ggttaaagcattctcatcaggac 247  Q
    ||||||| ||||||  |||||||    
T  21907297 ggttaaaacattcttttcaggac 21907319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 20260799 - 20260894
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||| ||||| ||||||||||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  20260799 ctaagactcctcaacaaaagcaactatgcatgtggtaccaaaat-cagggccgtgacccacaccactgtcgaatggttaaagcattctcatcaggac 20260894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 27296181 - 27296110
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27296181 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 27296110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 12572311 - 12572382
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12572311 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 12572382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 12578793 - 12578864
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12578793 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 12578864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 27785695 - 27785766
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  27785695 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 27785766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 27790916 - 27790987
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  27790916 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 27790987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 23269050 - 23269269
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataa-tcaacaacaatcatccaga-tataaaaattcaatcaacaaatgca 124  Q
    |||||||||||||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| | | ||||  ||||||| ||||||   |     
T  23269050 aatctaacacccta-aatatcaatgattattccatatgcataagtatttcataaatcaacaaca-tcatcaataatatagcaattcaaccaacaacaacg 23269147  T
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaat 224  Q
    ||||||| ||||||||||||   || |||| |||| || | || |||||| | ||||||||||||||| ||||||| ||   ||| ||||||| ||||||    
T  23269148 actcatgcaatgacatgacaacacctctaagactcttcgacaattgcaactaagcatgtggtaccata-ttcagggccggagccctcaccgctatcgaat 23269246  T
Q  225 ggttaaagcattctcatcaggac 247  Q
    ||||||||||||||  |||||||    
T  23269247 ggttaaagcattcttttcaggac 23269269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 23275919 - 23276138
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataa-tcaacaacaatcatccaga-tataaaaattcaatcaacaaatgca 124  Q
    |||||||||||||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| | | ||||  ||||||| ||||||   |     
T  23275919 aatctaacacccta-aatatcaatgattattccatatgcataagtatttcataaatcaacaaca-tcatcaataatatagcaattcaaccaacaacaacg 23276016  T
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaat 224  Q
    ||||||| ||||||||||||   || |||| |||| || | || |||||| | ||||||||||||||| ||||||| ||   ||| ||||||| ||||||    
T  23276017 actcatgcaatgacatgacaacacctctaagactcttcgacaattgcaactaagcatgtggtaccata-ttcagggccggagccctcaccgctatcgaat 23276115  T
Q  225 ggttaaagcattctcatcaggac 247  Q
    ||||||||||||||  |||||||    
T  23276116 ggttaaagcattcttttcaggac 23276138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 23263834 - 23264053
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataa-tcaacaacaatcatccaga-tataaaaattcaatcaacaaatgca 124  Q
    |||||||||||||| || |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| | | ||||  ||||||| ||||||   |     
T  23263834 aatctaacacccta-aatatcaatgattattccatatgcataagtatttcataaatcaacaaca-tcatcaataatatagcaattcaaccaacaacaacg 23263931  T
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaat 224  Q
    ||||||| ||||||||||||   || |||| ||||||| | || |||||| | |||||||||||||| |||||||| ||   ||| |||| || ||||||    
T  23263932 actcatgcaatgacatgacaacacctctaagactcctcgacaattgcaactaagcatgtggtaccat-attcagggccggagccctcaccactatcgaat 23264030  T
Q  225 ggttaaagcattctcatcaggac 247  Q
    | ||||||||||||  |||||||    
T  23264031 gattaaagcattcttttcaggac 23264053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 2105577 - 2105638
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||||||||  |||  ||| ||||||||| |||||||||||||||||    
T  2105577 atgcatgtggtaccataattcaggaccgtagccctcaccgctgtagaatggttaaagcattc 2105638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 21074182 - 21074086
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| |||||||||||||||| |||||||| ||   ||| |||||||  ||||||||||||||||||||  |||||||    
T  21074182 ctaagactcctcaacaaatgcaactatgcatgtggtaccat-attcagggccggagccctcaccgctaatcgaatggttaaagcattcttttcaggac 21074086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 26884128 - 26884213
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    |||| ||||||||| ||||||||| |||||||||||||||||  |||||| || | ||| ||||| | | ||||||||||||||||||    
T  26884128 ctaagactcctcaacaaatgcaactatgcatgtggtaccata--tcagggccggggccctcaccgttatagaatggttaaagcattct 26884213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 6261748 - 6261663
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    |||| ||||||||| ||||||||| |||||||||||||||||  |||| | ||  |||| ||||| | | ||||||||||||||||||    
T  6261748 ctaaaactcctcaacaaatgcaactatgcatgtggtaccata--tcagagccgaaaccctcaccgttatagaatggttaaagcattct 6261663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 9497 - 9539
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataa 193  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  9497 ctaagactcctcaaaaaatgcaactatgcatgtggtaccataa 9539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 28971476 - 28971395
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattc 237  Q
    ||||||||||||||||||  |||||||||||||||| |||||||  ||   ||| |||||||| | |||||||||||||||||    
T  28971476 actcctcaataaatgcaaatatgcatgtggtaccat-attcaggaccgaagccctcaccgctgtttgaatggttaaagcattc 28971395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 19663026 - 19662985
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  19663026 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 19662985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 27211181 - 27211140
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  27211181 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 27211140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 29280916 - 29280957
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  29280916 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 29280957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 22809879 - 22809942
Alignment:
Q  173 acaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| || ||||| || | ||| ||||||| | |||||||||||||||||    
T  22809879 acaatgcatgtggtaccat-atccagggccgaggccctcaccgctatagaatggttaaagcattc 22809942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 4943 - 4725
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||   ||||    
T  4943 aatctaataccctacaatatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatatagcaattcattcaacaacaacaac 4844  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||| ||||||||||||  ||| |||| ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| |    
T  4843 tcatgtaatgacatgaca-cccctctaagactcctcgataaatgcaactatgcatgtggtaccat-attcagggccgtgacccacaccgctgtcgaattg 4746  T
Q  227 ttaaagcattctcatcaggac 247  Q
    |||||||||||||||||||||    
T  4745 ttaaagcattctcatcaggac 4725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 12591972 - 12591738
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| ||| |||||||||||||| |||||| ||  |||| || |||||||    
T  12591972 acatcaattgaaaatctaacaccttacaacatcaatgattattcaataagcataggtaattcataatcaacaaaaatcattcaagtatagaa-ttcaatc 12591874  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccct-aatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacac 213  Q
    ||||| |||||||||||| |||||||||||  |||| | |||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  12591873 aacaa-tgcaactcatgatatgacatgacacccccctttaatactcctcaataaatgcaaatatgcatgtggtaccataattcagggccgtgacccacac 12591775  T
Q  214 cgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||||||||||| |||||||||    
T  12591774 cgctgtcgaatggttaaagcattctcagcaggaccta 12591738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 13006146 - 13006380
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| || ||||| || |||||||    
T  13006146 acatcaattgaaaatctagcaccttacaacatcaatgattattcaataagcataggtatttcataatcgacaacaatcattcaaatatagaa-ttcaatc 13006244  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccct-aatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacac 213  Q
    ||||| |||||||||||| |||||||||||  |||| | |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  13006245 aacaa-tgcaactcatgatatgacatgacacccccctttaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccatgacccacac 13006343  T
Q  214 cgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    | ||||||||||||||||||||||||| |||||||||    
T  13006344 cactgtcgaatggttaaagcattctcagcaggaccta 13006380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 13742345 - 13742579
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||| | |||||||||    
T  13742345 acatcaattgaaaatctaacaccttacaacatcaatgattattcaataagcataggtatttcataatcaacaacaatcatccaagtat-agaattcaatc 13742443  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccct-aatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacac 213  Q
    |||||||||||||||||| |||||| ||||  | |||| ||||||||||||| |||||||  |||||||||||||||||||| |||| ||| ||||||||    
T  13742444 aacaaatgcaactcatgatatgacacgacaccctccctcaatactcctcaat-aatgcaattatgcatgtggtaccataatttagggccgttacccacac 13742542  T
Q  214 cgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||||||||||| |||||||||    
T  13742543 cgctgtcgaatggttaaagcattctcaacaggaccta 13742579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 16676043 - 16676262
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcat-aatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaa 125  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||   |||    
T  16676043 aatctaacaccctacaatatcaatgattattcaataggcataagtatttcataaatcaacaacaatcatccagatatagcaattcaatcaacaataacaa 16676142  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatg 225  Q
    |||||| ||||||||||||  ||| |||| ||||||| ||||||||||| |||||||||||||||| ||| |||  ||||||||||||||||||||||||    
T  16676143 ctcatgtaatgacatgaca-cccctctaagactcctcgataaatgcaactatgcatgtggtaccat-attaaggaccgtgacccacaccgctgtcgaatg 16676240  T
Q  226 gttaaagcattctcatcaggac 247  Q
    ||||||||||||||||||||||    
T  16676241 gttaaagcattctcatcaggac 16676262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 17650280 - 17650499
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcat-aatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaa 125  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||   |||    
T  17650280 aatctaacaccctacaatatcaatgattattcaataggcataagtatttcataaatcaacaacaatcatccagatatagcaattcaatcaacaataacaa 17650379  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatg 225  Q
    |||||| ||||||||||||  ||| |||| ||||||| ||||||||||| |||||||||||||||| ||| |||  ||||||||||||||||||||||||    
T  17650380 ctcatgtaatgacatgaca-cccctctaagactcctcgataaatgcaactatgcatgtggtaccat-atttaggaccgtgacccacaccgctgtcgaatg 17650477  T
Q  226 gttaaagcattctcatcaggac 247  Q
    ||||||||||||||||||||||    
T  17650478 gttaaagcattctcatcaggac 17650499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 23 - 250
Target Start/End: Complemental strand, 12711228 - 12711003
Alignment:
Q  23 tgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataa-tcaacaacaatcatccagatataaaaattcaatcaacaaat 121  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||  ||  | |||||||||||||| |    
T  12711228 tgaaaatctaacaccttacaatatcaatgattattcaataagcataagtatttcataaatcaacaacaatcatcca--taatataattcaatcaacaa-t 12711132  T
Q  122 gcaactcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcg 221  Q
    |||  ||||   |||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  12711131 gcagttcatcttatgacacgacatcccccctaatactcctcaataaatgcaaatatgcatgtggtaccataatccagggccgtgacccacaccgctgtcg 12711032  T
Q  222 aatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||| |||||||||    
T  12711031 aatggttaaagcattctcaacaggaccta 12711003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 23 - 250
Target Start/End: Complemental strand, 13124299 - 13124074
Alignment:
Q  23 tgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataa-tcaacaacaatcatccagatataaaaattcaatcaacaaat 121  Q
    ||||||||||||||| || || |||||||||||||||||| ||||||||||||||||| |||||||||||||||||  ||  | |||||||||||||| |    
T  13124299 tgaaaatctaacaccttagaatatcaatgattattcaataagcataagtatttcataaatcaacaacaatcatcca--taatagaattcaatcaacaa-t 13124203  T
Q  122 gcaactcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcg 221  Q
    |||  ||||   |||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  13124202 gcagttcatcttatgacacgacatcccccctaatactcctcaataaatgcaaatatgcatgtggtaccataatccagggccgtgacccacaccgctgtcg 13124103  T
Q  222 aatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||| |||||||||    
T  13124102 aatggttaaagcattctcaacaggaccta 13124074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 20328573 - 20328355
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||  |||| |||||||||  ||||     
T  20328573 aatctaacaccctacaatatcaatgattattcgataagcataagtatttcataatcaacaac-atcatccagatatagcaatttaatcaacaacagcaat 20328475  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||| ||||||||||||   || |||| || |||| | |||||| || |||||||||||||||| || ||||  |||  ||||||||||||||||||||    
T  20328474 tcatgtaatgacatgacaacacctctaagacccctcgacaaatgctactatgcatgtggtaccat-atacaggaccgtagcccacaccgctgtcgaatgg 20328376  T
Q  227 ttaaagcattctcatcaggac 247  Q
    ||||||||||||  |||||||    
T  20328375 ttaaagcattcttttcaggac 20328355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 14421314 - 14421428
Alignment:
Q  136 gacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcat 235  Q
    |||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14421314 gacatgacctcccccctaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccgtgacccacaccgctgtcgaatggttaaagcat 14421413  T
Q  236 tctcatcaggaccta 250  Q
    ||||| |||||||||    
T  14421414 tctcaacaggaccta 14421428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 11390651 - 11390433
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataat-caacaacaatcatccagatataaaaattcaatcaacaaatgcaa 125  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||  || |||||||||||| |  ||||||||| ||||   |||    
T  11390651 aatctaacaccctataatatcaatgattattcaataggcataagtatttcataatccaatcac-atcatccagatacagcaattcaatccacaataacaa 11390553  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatg 225  Q
    |||||| ||||||||||||  ||| |||| ||||||| | ||||||||| ||||||||||||||||  ||||||  |||  ||||| |||||||||||||    
T  11390552 ctcatgtaatgacatgaca-ccccactaagactcctcgacaaatgcaactatgcatgtggtaccat-gttcaggaccgtagcccactccgctgtcgaatg 11390455  T
Q  226 gttaaagcattctcatcaggac 247  Q
    |||||||||||||  |||||||    
T  11390454 gttaaagcattcttttcaggac 11390433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 11384163 - 11383945
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataat-caacaacaatcatccagatataaaaattcaatcaacaaatgcaa 125  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||  || |||||||||||| |  ||||||||  ||||   |||    
T  11384163 aatctaacaccctataatatcaatgattattcaataggcataagtatttcataatccaatcac-atcatccagatacagcaattcaattcacaataacaa 11384065  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatg 225  Q
    |||||| ||||||||||||  ||| |||| ||||||| | ||||||||| ||||||||||||||||  ||||||  |||  ||||| |||||||||||||    
T  11384064 ctcatgtaatgacatgaca-ccccactaagactcctcgacaaatgcaactatgcatgtggtaccat-gttcaggaccgtagcccactccgctgtcgaatg 11383967  T
Q  226 gttaaagcattctcatcaggac 247  Q
    |||||||||||||  |||||||    
T  11383966 gttaaagcattcttttcaggac 11383945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 4279943 - 4280036
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4279943 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 4280036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 19616275 - 19616368
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19616275 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 19616368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 21232358 - 21232194
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||| |||||| | |||||| ||||| | ||||||   | ||    
T  21232358 aatctaacaccctaaaatatcaatgattattcaatatgcataagtatttcataatcaacaac-atcatcaaaatataacaattcgaccaacaacaacgac 21232260  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    ||||| |||| |||||||   || |||| ||||||| | ||||||||| |||||||||||||||||    
T  21232259 tcatgtaatgccatgacaacacctctaagactcctcgacaaatgcaactatgcatgtggtaccata 21232194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 23666029 - 23665934
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| ||||||||||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  23666029 ctaagactcctcaacaaatgcaactatgcatgtggtaccaaaat-cagggccgtgacccacaccactgtcgaatggttaaagcattctcatcaggac 23665934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 11302827 - 11302922
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| ||||||||||||||| ||| ||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  11302827 ctaagactcctcaacaaatgcaactatgcatgtggtaccaaaat-cagggccgtgacccacacctttgtcgaatggttaaagcattctcatcaggac 11302922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 20580118 - 20580047
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  20580118 atgcatgtggtaccataaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 20580047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 23201679 - 23201608
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23201679 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 23201608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 23507806 - 23507735
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23507806 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 23507735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 29795705 - 29795800
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| ||||||||||||||| ||  ||||| ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  29795705 ctaagactcctcaacaaatgcaactatgcatgtggtaccaaaac-cagggccgtgacccataccactgtcgaatggttaaagcattctcatcaggac 29795800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 29799524 - 29799619
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| ||||||||||||||| ||  ||||| ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  29799524 ctaagactcctcaacaaatgcaactatgcatgtggtaccaaaac-cagggccgtgacccataccactgtcgaatggttaaagcattctcatcaggac 29799619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 807174 - 807103
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  807174 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 807103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 11632117 - 11632046
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  11632117 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 11632046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 18049407 - 18049336
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  18049407 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 18049336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 18055886 - 18055815
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  18055886 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 18055815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 18606841 - 18606927
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    |||| ||||||||| ||||||||  ||||||||||||||||  ||||||  |||  ||||||||||||||||||||||||||||||||    
T  18606841 ctaagactcctcaacaaatgcaattatgcatgtggtaccatg-ttcaggaccgtagcccacaccgctgtcgaatggttaaagcattct 18606927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 14281825 - 14281762
Alignment:
Q  173 acaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    |||||||||||||||||||||| ||||| |||  ||| ||||||||| |||||||||||||||||    
T  14281825 acaatgcatgtggtaccataat-cagggccgtagccctcaccgctgtagaatggttaaagcattc 14281762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 2965891 - 2965948
Alignment:
Q  136 gacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataa 193  Q
    |||||||||  ||| |||| ||||||||| ||||||||| ||||||||||||||||||    
T  2965891 gacatgacaaccccactaagactcctcaacaaatgcaactatgcatgtggtaccataa 2965948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 14320767 - 14320682
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    |||| ||||||||| ||||||||| |||||||||||||||||  |||||| ||   ||| ||||| | | ||||||||||||||||||    
T  14320767 ctaagactcctcaacaaatgcaactatgcatgtggtaccata--tcagggccggagccctcaccgttatagaatggttaaagcattct 14320682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 191
Target Start/End: Original strand, 19145418 - 19145581
Alignment:
Q  28 atctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaatt-caatcaacaaatgcaac 126  Q
    ||||||||||||| || | |||| ||| |||||||  ||||   |||||||||||||||||| ||||  | |||| | |||| ||| ||||||   | ||    
T  19145418 atctaacaccctaaaataacaataattcttcaatatacatatacatttcataatcaacaaca-tcattaacatatgacaatttcaaccaacaacaacgac 19145516  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccat 191  Q
    ||||| ||||||||||||   || |||| ||||||||| |||||| || ||||||||||||||||    
T  19145517 tcatgcaatgacatgacaacaccactaagactcctcaacaaatgcgactatgcatgtggtaccat 19145581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 191
Target Start/End: Original strand, 20744817 - 20744980
Alignment:
Q  28 atctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaatt-caatcaacaaatgcaac 126  Q
    ||||||||||||| || | |||| ||| |||||||  ||||   |||||||||||||||||| ||||  | |||| | |||| ||| ||||||   | ||    
T  20744817 atctaacaccctaaaataacaataattcttcaatatacatatacatttcataatcaacaaca-tcattaacatatgacaatttcaaccaacaacaacgac 20744915  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccat 191  Q
    ||||| ||||||||||||   || |||| ||||||||| |||||| || ||||||||||||||||    
T  20744916 tcatgcaatgacatgacaacaccactaagactcctcaacaaatgcgactatgcatgtggtaccat 20744980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 31154342 - 31154427
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    |||| ||||||| | ||||||||| |||||||||||||||||  |||||| || | ||| ||||| | | ||||||||||||||||||    
T  31154342 ctaagactcctcgacaaatgcaactatgcatgtggtaccata--tcagggccgaggccctcaccgttatagaatggttaaagcattct 31154427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 37244504 - 37244422
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg--tcgaatggttaaagcattc 237  Q
    ||||||||||||||||||  |||||||||||||||||| |||||| ||   ||| ||||||||  | |||||||||||||||||    
T  37244504 actcctcaataaatgcaaatatgcatgtggtaccataa-tcagggccgaagccctcaccgctgttttgaatggttaaagcattc 37244422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 14266231 - 14266165
Alignment:
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccat 191  Q
    ||||||| ||||||||||||   || |||| ||||||||| |||||| || ||||||||||||||||    
T  14266231 actcatgcaatgacatgacaacaccactaagactcctcaacaaatgcgactatgcatgtggtaccat 14266165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 32771475 - 32771556
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattc 237  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||| ||   ||| |||||||| | |||||||||||||||||    
T  32771475 actcctcaacaaatgcaaatatgcatgtggtaccat-attcagggccgaagccctcaccgctgtttgaatggttaaagcattc 32771556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 147042 - 147083
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  147042 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 147083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 1612623 - 1612683
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  1612623 atgcatgtggtaccataat-caggaccgtagcccccaccgctgtagaatggttaaagcattc 1612683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 13678257 - 13678298
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  13678257 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 13678298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 14565683 - 14565724
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  14565683 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 14565724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 15166749 - 15166790
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  15166749 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 15166790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 16008059 - 16008100
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  16008059 ctaagactcctcaacaaatgcaaccatgcatgtggtaccata 16008100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 16109243 - 16109183
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  16109243 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 16109183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 18871841 - 18871882
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  18871841 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 18871882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 20907562 - 20907521
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  20907562 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 20907521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 18958621 - 18958543
Alignment:
Q  160 ctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg--tcgaatggttaaagcattc 237  Q
    ||||||||||||||  |||||||||||||||||| |||||| ||   ||| ||||||||  | |||||||||||||||||    
T  18958621 ctcaataaatgcaaatatgcatgtggtaccataa-tcagggccgaagccctcaccgctgttttgaatggttaaagcattc 18958543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 5e-74; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 22440050 - 22439832
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||   ||||    
T  22440050 aatctaacaccctacaatatcaatgattattcaataggcataagtatttcataatcaacaacaatcattcagatatagcaattcaatcaataataacaac 22439951  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||| ||||||||||||  ||| |||| ||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  22439950 tcatgtaatgacatgaca-cccctctaagactcctcgataaatgcaactatgcatgtggtaccat-attcagggccgtgacccacaccgctgtcgaatgg 22439853  T
Q  227 ttaaagcattctcatcaggac 247  Q
    ||||| |||||||||||||||    
T  22439852 ttaaaacattctcatcaggac 22439832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 23527287 - 23527522
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||||||| ||||| |||| ||||||||||| |||||||| ||  |||| || |||||||    
T  23527287 acatcaattgaaaatctaacaccttacaacattaatgattattcaataagcataggtatctcataatcaacgacaatcattcaagtatagaa-ttcaatc 23527385  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccct--aatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccaca 212  Q
    ||||| |||||||||||| ||||||||||   ||||||  || |||||||||| |||||||  ||||||||||||||||||||||||| | |||||||||    
T  23527386 aacaa-tgcaactcatgatatgacatgacgccccccctttaacactcctcaatgaatgcaaatatgcatgtggtaccataattcagggccatgacccaca 23527484  T
Q  213 ccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||||||||||||| |||||||||    
T  23527485 ccgctgtcgaatggttaaagcattctcagcaggaccta 23527522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 19510959 - 19511073
Alignment:
Q  136 gacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcat 235  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19510959 gacatgaccttccccctaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccgtgacccacaccgctgtcgaatggttaaagcat 19511058  T
Q  236 tctcatcaggaccta 250  Q
    ||||| |||||||||    
T  19511059 tctcaacaggaccta 19511073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 37805517 - 37805422
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37805517 ctaagactcctcaacaaatgcaactatgcatgtggtaccaaaat-cagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 37805422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 23112939 - 23112844
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  23112939 ctaagactcctcaacaaatgcaactatgcatgtggtaccataat-cagggccgtgaccctcaccgctgtcgaatggttaaagcattctcatcaggac 23112844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 1857692 - 1857607
Alignment:
Q  164 ataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||  ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1857692 ataaatgcaaatatgcatgtggtaccata-ttcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 1857607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 21675660 - 21675575
Alignment:
Q  164 ataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||  ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21675660 ataaatgcaaatatgcatgtggtaccata-ttcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 21675575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 9775442 - 9775537
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| ||||||||||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  9775442 ctaagactcctcaacaaatgcaactatgcatgtggtaccaaaat-cagggccgtgacccacaccactgtcgaatggttaaagcattctcatcaggac 9775537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 17264971 - 17264900
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17264971 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 17264900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 22175014 - 22175085
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22175014 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 22175085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 17271453 - 17271382
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  17271453 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgttgaatggttaaagcattctcatcaggac 17271382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 21678443 - 21678372
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  21678443 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 21678372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 18409357 - 18409194
Alignment:
Q  29 tctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatcca-gatataaaaattcaatcaacaaatgcaact 127  Q
    |||||||||||| || |||||||||||||||||| ||||| ||||||||||||||||||| |||||| |  ||| |||||||||| ||||||   | |||    
T  18409357 tctaacaccctaaaatatcaatgattattcaatatgcatatgtatttcataatcaacaac-atcatcaataatacaaaaattcaaccaacaacaacgact 18409259  T
Q  128 catgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| |||  |||||||   || |||| ||||||| | ||||||||| ||||| |||||||||||    
T  18409258 catgcaatttcatgacaacacctctaagactcctcgacaaatgcaactatgcacgtggtaccata 18409194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 24669189 - 24669109
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||||  ||| ||||||||| |||||||||||||||||    
T  24669189 actcctcaataaatgcaaatatgcatgtggtaccata-ttcagggtcgtagccctcaccgctgtagaatggttaaagcattc 24669109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 24738958 - 24738878
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||||  ||| ||||||||| |||||||||||||||||    
T  24738958 actcctcaataaatgcaaatatgcatgtggtaccata-ttcagggtcgtagccctcaccgctgtagaatggttaaagcattc 24738878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 24751727 - 24751647
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||  |||||||||||||||| |||||||| |||  ||| ||||||||| |||||||||||||||||    
T  24751727 actcctcaataaatgcaaatatgcatgtggtaccat-attcagggccgtagccctcaccgctgtagaatggttaaagcattc 24751647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 19510115 - 19510175
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtattt 75  Q
    ||||||| ||||||||||||||| ||||| ||||| |||||||||||| |||||| |||||    
T  19510115 acatcaattgaaaatctaacaccttacaatatcaaagattattcaataagcataattattt 19510175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 10816774 - 10816834
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||| ||||| |||||  ||| ||||||||| |||||||||||||||||    
T  10816774 atgcatgtggtaccata-ttcagtgtcgtagccctcaccgctgtagaatggttaaagcattc 10816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 19235822 - 19235864
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataa 193  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  19235822 ctaagactcctcaacaaatgcaactatgcatgtggtaccataa 19235864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 22460077 - 22460119
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataa 193  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  22460077 ctaagactcctcaacaaatgcaactatgcatgtggtaccataa 22460119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 27636074 - 27635993
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattc 237  Q
    |||||||||||| |||||  |||||||||||||||| |||||||| ||   ||| |||||||| | |||||||||||||||||    
T  27636074 actcctcaataagtgcaaatatgcatgtggtaccat-attcagggccgaagccctcaccgctgtttgaatggttaaagcattc 27635993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 758427 - 758367
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  758427 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 758367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 22313005 - 22312945
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  22313005 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 22312945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 22336082 - 22336123
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  22336082 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 22336123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 22749728 - 22749769
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  22749728 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 22749769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 23538801 - 23538861
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||| ||||||| |||  ||| ||||||||| | |||||||||||||||    
T  23538801 atgcatgtggtaccata-ttcagggccgtagccctcaccgctgtagtatggttaaagcattc 23538861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 28371627 - 28371586
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  28371627 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 28371586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 34829003 - 34829044
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  34829003 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 34829044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 38145954 - 38145913
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  38145954 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 38145913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 42960057 - 42960098
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  42960057 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 42960098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 140; Significance: 2e-73; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 28 - 250
Target Start/End: Complemental strand, 13202 - 12981
Alignment:
Q  28 atctaacaccctacaacatcaatgattatt-caataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    |||||||||||||||| ||||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||| | | | ||||||||||  |||||    
T  13202 atctaacaccctacaatatcaatgattatttcaaaagtcataagtgtttcataatcaacaacaatcatccagatatcacactccaatcaacaatagcaac 13103  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  13102 tcatgaaatgacatgaca-tccccctaatactcctcgataaatgcaactatgcatgtggtaccataa-tcaggtccgtgacccacaccgctgtcgaatgg 13005  T
Q  227 ttaaagcattctcatcaggaccta 250  Q
    |||||||||||| |||||||||||    
T  13004 ttaaagcattcttatcaggaccta 12981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 63370 - 63310
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  63370 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 63310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 110168 - 110209
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  110168 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 110209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 23 - 250
Target Start/End: Complemental strand, 19903259 - 19903031
Alignment:
Q  23 tgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataa-tcaacaacaatcatccagatataaaaattcaatcaacaaat 121  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| | |||  |||||||||||| |||    
T  19903259 tgaaaatctaacaccttacaatatcaatgattattcaataagcataggtatttcataaatcaacaacaatcatccata-atagcaattcaatcaacgaat 19903161  T
Q  122 gcaactcatgaaatgacatgacattccccc-taatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtc 220  Q
    |||||||||   |||||| ||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  19903160 gcaactcatcttatgacacgacatccccccctaatactcctcaataaatgcaattatgcatgtggtaccataattcagggccgtgacccacaccgctgtc 19903061  T
Q  221 gaatggttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||||| |||||||||    
T  19903060 gaatggttaaagcattctcaacaggaccta 19903031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 17053437 - 17053671
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| |||||||||| |||| ||||||||||||||||||| |||| ||||| ||||||||||||| |||||||||||  | ||||| || |||||||    
T  17053437 acatcaattgaaaatctagcaccttacaacatcaatgattattaaataagcataggtatttcataatcgacaacaatcatttaaatatagaa-ttcaatc 17053535  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccct-aatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacac 213  Q
    ||||| |||||||||||| |||||||||||  |||| | |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  17053536 aacaa-tgcaactcatgatatgacatgacacccccctttaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccatgacccacac 17053634  T
Q  214 cgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    | ||| ||||||||||||||||||||| |||||||||    
T  17053635 cactgccgaatggttaaagcattctcagcaggaccta 17053671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 25409421 - 25409627
Alignment:
Q  42 aacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaactcatgaaatgacatg 141  Q
    ||||||||||||||||||| ||||||||   |||||||||||| | |||||||||| |  ||  ||||||||| ||||||||||||||||||||||||||    
T  25409421 aacatcaatgattattcaacaggcataaacttttcataatcaa-agcaatcatccacaattattaattcaatcgacaaatgcaactcatgaaatgacatg 25409519  T
Q  142 acattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcat 241  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||    
T  25409520 acatcccccctaattctcctcaataaatgcaactatgcatgtggtaccataa-ccagggccgtgacccacaccgctgtcgaatggttaaagcattctcat 25409618  T
Q  242 caggaccta 250  Q
    |||||||||    
T  25409619 caggaccta 25409627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 23 - 247
Target Start/End: Original strand, 23865283 - 23865505
Alignment:
Q  23 tgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataa-tcaacaacaatcatccagatataaaaattcaatcaacaaat 121  Q
    ||||||||||||||| || || |||||||||||||||||| ||||||||||||||||| |||||||||||||||||  ||  | |||||||||||||| |    
T  23865283 tgaaaatctaacaccttagaatatcaatgattattcaataagcataagtatttcataaatcaacaacaatcatcca--tagtagaattcaatcaacaa-t 23865379  T
Q  122 gcaactcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcg 221  Q
    |||  ||||   |||| | ||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||| | |||||||||||||||||     
T  23865380 gcagttcatcttatgatacgacatcccccctaatactcctcaataaatgcaagtatgcatgtggtaccataatccagggccatgacccacaccgctgtca 23865479  T
Q  222 aatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||||||| ||||||    
T  23865480 aatggttaaagcattctcaacaggac 23865505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 14057931 - 14057714
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||   ||||    
T  14057931 aatctaacaccctacaatatcaatgattattcattaagcataagtatttcataatcaacaac-atcatccagatataacaattcaaccaacaacaacaac 14057833  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||| ||||||||||||  ||| |||| ||||||| | ||||||||| |||||||||||||||| |||||||| ||   ||| ||||||| ||||||||    
T  14057832 tcatgtaatgacatgaca-accctctaagactcctcgacaaatgcaactatgcatgtggtaccat-attcagggccggagccctcaccgctatcgaatgg 14057735  T
Q  227 ttaaagcattctcatcaggac 247  Q
    |||||||||||| ||||||||    
T  14057734 ttaaagcattcttatcaggac 14057714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 44476196 - 44476310
Alignment:
Q  136 gacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcat 235  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44476196 gacatgaccttccccctaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccgtgacccacaccgctgtcgaatggttaaagcat 44476295  T
Q  236 tctcatcaggaccta 250  Q
    ||||| |||||||||    
T  44476296 tctcaacaggaccta 44476310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 44479458 - 44479572
Alignment:
Q  136 gacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcat 235  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44479458 gacatgaccttccccctaatactcctcaataaatgcaactatgcatgtggtaccataattcagggccgtgacccacaccgctgtcgaatggttaaagcat 44479557  T
Q  236 tctcatcaggaccta 250  Q
    ||||| |||||||||    
T  44479558 tctcaacaggaccta 44479572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 25110721 - 25110886
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagta-tttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaa 125  Q
    |||||||||||||| || |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||  |||||||||||||    |||    
T  25110721 aatctaacaccctataatatcaatgattattcaatatgcataagtattttcataatcaacaac-atcatccagatatagcaattcaatcaacatcatcaa 25110819  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
     ||||| ||||||||||||   ||||||| ||||||| | ||||||| | |||||||||||||||||    
T  25110820 ttcatgtaatgacatgacaacacccctaagactcctcgacaaatgcagccatgcatgtggtaccata 25110886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 23825104 - 23825197
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||| ||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23825104 actcctcaacaaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 23825197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 30767145 - 30767053
Alignment:
Q  157 ctcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30767145 ctcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcataaggaccta 30767053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 9273360 - 9273292
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcag 244  Q
    ||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9273360 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcag 9273292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 1804668 - 1804597
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  1804668 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 1804597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 18681703 - 18681632
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  18681703 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 18681632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 31568012 - 31567941
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  31568012 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 31567941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 31573233 - 31573162
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  31573233 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 31573162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 36799376 - 36799447
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  36799376 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacaggac 36799447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 247
Target Start/End: Original strand, 18609742 - 18609863
Alignment:
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaat 224  Q
    ||||||| ||||||||||||   || |||| ||||||| |||| |||||| |||||||||||||||| |||||||| ||   ||| ||| ||| ||||||    
T  18609742 actcatgcaatgacatgacaacacctctaagactcctcgataattgcaactatgcatgtggtaccat-attcagggccggagccctcactgctatcgaat 18609840  T
Q  225 ggttaaagcattctcatcaggac 247  Q
    ||||||||||||||  |||||||    
T  18609841 ggttaaagcattcttttcaggac 18609863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 23653215 - 23653104
Alignment:
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaa 223  Q
    ||||||| ||||||||||||   || |||| ||||||||| ||||||||| |||||||||||||||| |||||||| ||   ||| |||||||  | |||    
T  23653215 actcatgcaatgacatgacaacaccactaagactcctcaacaaatgcaactatgcatgtggtaccat-attcagggccgaagccctcaccgctaattgaa 23653117  T
Q  224 tggttaaagcatt 236  Q
    |||||||||||||    
T  23653116 tggttaaagcatt 23653104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 31412708 - 31412626
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg--tcgaatggttaaagcattc 237  Q
    ||||||||||||||||||  |||||||||||||||||| |||||| ||   ||| ||||||||  | |||||||||||||||||    
T  31412708 actcctcaataaatgcaaatatgcatgtggtaccataa-tcagggccgaagccctcaccgctgttttgaatggttaaagcattc 31412626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 31418890 - 31418808
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg--tcgaatggttaaagcattc 237  Q
    ||||||||||||||||||  |||||||||||||||||| |||||| ||   ||| ||||||||  | |||||||||||||||||    
T  31418890 actcctcaataaatgcaaatatgcatgtggtaccataa-tcagggccgaagccctcaccgctgttttgaatggttaaagcattc 31418808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 44475496 - 44475555
Alignment:
Q  16 catcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtattt 75  Q
    |||||| ||||||||||||||| ||||| || || |||||||||||| |||||| |||||    
T  44475496 catcaattgaaaatctaacaccttacaatattaaagattattcaataagcataattattt 44475555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 44478758 - 44478817
Alignment:
Q  16 catcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtattt 75  Q
    |||||| ||||||||||||||| ||||| || || |||||||||||| |||||| |||||    
T  44478758 catcaattgaaaatctaacaccttacaatattaaagattattcaataagcataattattt 44478817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 23653819 - 23653900
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaatggttaaagcattc 237  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||| ||   ||| |||||||  | |||||||||||||||||    
T  23653819 actcctcaagaaatgcaactatgcatgtggtaccat-attcagggccgaagccctcaccgctaatagaatggttaaagcattc 23653900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 24321804 - 24321762
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataa 193  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  24321804 ctaagactcctcaacaaatgcaactatgcatgtggtaccataa 24321762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 8729214 - 8729173
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  8729214 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 8729173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 22025762 - 22025702
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||| ||   ||| ||||||||| |||||||||||||||||    
T  22025762 atgcatgtggtaccataat-cagggccgaagccctcaccgctgtagaatggttaaagcattc 22025702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 22050201 - 22050261
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  22050201 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 22050261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 22055719 - 22055779
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  22055719 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 22055779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 22177586 - 22177646
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  22177586 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 22177646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 27942375 - 27942334
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  27942375 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 27942334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 4624 - 4406
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||   ||||    
T  4624 aatctaacaccctacaatatcaatgattatgaaataggcataagtatttcctaatcaacaacaatcatccagatatagcaattcaatcaacaacaacaac 4525  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||| | ||||||||||||  ||| |||| ||||||| ||||||||||| ||||||| |||||||| |||||||| |||||||||||||||||||||||||    
T  4524 tcaagtaatgacatgaca-cccctctaagactcctcgataaatgcaactatgcatgcggtaccat-attcagggccgtgacccacaccgctgtcgaatgg 4427  T
Q  227 ttaaagcattctcatcaggac 247  Q
    |||||||||||||||||||||    
T  4426 ttaaagcattctcatcaggac 4406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 23 - 250
Target Start/End: Complemental strand, 9962 - 9735
Alignment:
Q  23 tgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataa-tcaacaacaatcatccagatataaaaattcaatcaacaaat 121  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||| ||||||||||| |||||| |||||||||| | |||  |||||||||||| |||    
T  9962 tgaaaatctaacaccttacaatatcaatgattattcaataagcataggtatttcataaatcaacagcaatcatccata-atagcaattcaatcaacgaat 9864  T
Q  122 gcaactcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcg 221  Q
    |||||||||   ||||||  |||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9863 gcaactcatcttatgacacaacatcccccctaatactcctcaataaatgcaattatgcatgtggtaccataattcagggccgtgacccacaccgctgtcg 9764  T
Q  222 aatggttaaagcattctcatcaggaccta 250  Q
    |||||||||||||||||||  ||||||||    
T  9763 aatggttaaagcattctcaataggaccta 9735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 15781 - 15563
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    |||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||   ||||    
T  15781 aatctaaccccctacaataacaatgattattcaataggcataagtatttcataatcaacaacaatcatccagttatagcaattcaatcaacaataacaac 15682  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||| ||||||||||||  ||| |||| ||||||| ||||||||||| |||||||||||||| | |||||||| |||||||||||||| ||||||||||    
T  15681 tcatgtaatgacatgaca-cccctctaagactcctctataaatgcaactatgcatgtggtacc-ttattcagggccgtgacccacaccgttgtcgaatgg 15584  T
Q  227 ttaaagcattctcatcaggac 247  Q
    |||||||||||||||||||||    
T  15583 ttaaagcattctcatcaggac 15563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 41110654 - 41110888
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||| || ||||| || |||||||    
T  41110654 acatcaattgaaaatctagcaccttacaacatcaatgattattcaataagtataggtatttcataatcgacaacaatcattcaaatatagaa-ttcaatc 41110752  T
Q  115 aacaaatgcaactcatgaaatgacatgacattccccct-aatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacac 213  Q
    ||||| | |||||||||| |||||||||||  |||| | |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  41110753 aacaatt-caactcatgatatgacatgacacccccctttaatactcctcaataaatgcaactatgcatgtgataccataattcagggtcatgacccacac 41110851  T
Q  214 cgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |  |||||||||||||||||||||||| || ||||||    
T  41110852 cattgtcgaatggttaaagcattctcagcatgaccta 41110888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 20046217 - 20045982
Alignment:
Q  15 acatcaactgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatc 114  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||  ||||| |||||||||||||||||| ||  ||    ||| |||||    
T  20046217 acatcaactgaaaatctaacaccttacaatatcaaagattattcaataagcatagttattttataatcaacaacaatcattca--taatggaatccaatc 20046120  T
Q  115 aacaaa-tgcaactcatgaaatgacatgacattcccc-ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccaca 212  Q
    |||||| | |||||||||  |||||| ||||| |||  |||||||||||||| ||||| ||  ||||||||||||||||||||||||| |||||||||||    
T  20046119 aacaaaatacaactcatgttatgacacgacatccccatctaatactcctcaaaaaatgaaattatgcatgtggtaccataattcagggccgtgacccaca 20046020  T
Q  213 ccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  20046019 ccgctgtagaatggttaaagcattctcagcaggaccta 20045982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 19664454 - 19664236
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||   ||||    
T  19664454 aatctaacaccttacaatatcaatgattattcaatatgcataagtatttcataatcaacaac-atcatccagatatagcaattcaaccaacaacaacaac 19664356  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatgg 226  Q
    ||||| ||||||||||||   || |||| ||||||||| ||||||| | |||||||||||||||| |||||||| ||   ||| ||| ||| ||||||||    
T  19664355 tcatgtaatgacatgacaacacctctaagactcctcaacaaatgcagctatgcatgtggtaccat-attcagggccggagccctcactgctatcgaatgg 19664257  T
Q  227 ttaaagcattctcatcaggac 247  Q
    |||||||||||| ||||||||    
T  19664256 ttaaagcattcttatcaggac 19664236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 146 - 250
Target Start/End: Complemental strand, 20438739 - 20438635
Alignment:
Q  146 tccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcagg 245  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  20438739 tccccctaatactcctaaataaatgcaactatgcatgtggtaccataattcagggccgtgacccacaccgctgtcgaatggttaaagcattctcaacagg 20438640  T
Q  246 accta 250  Q
    |||||    
T  20438639 accta 20438635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 21542036 - 21542129
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21542036 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 21542129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 42096100 - 42096007
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    |||||||| |||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42096100 actcctcagtaaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 42096007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 27280192 - 27280263
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27280192 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 27280263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 32650102 - 32650172
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||||||||||| ||||||  |||  ||||||||| ||||||||||||||||||||||  |||||||    
T  32650102 atgcatgtggtaccata-ttcaggaccgtagcccacaccgttgtcgaatggttaaagcattcttttcaggac 32650172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 19778642 - 19778577
Alignment:
Q  173 acaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattct 238  Q
    ||||||||||||||||||||| |||||||||   ||| |||||||| ||||||||||||||||||||    
T  19778642 acaatgcatgtggtaccataa-tcagggtcgcagccctcaccgctgttcgaatggttaaagcattct 19778577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 22448440 - 22448380
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||| |||  ||| ||||||||| |||||||||||||||||    
T  22448440 atgcatgtggtaccataat-cagggccgtagccctcaccgctgttgaatggttaaagcattc 22448380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 36614918 - 36614994
Alignment:
Q  159 cctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    |||||||||||||||  ||||||||||||||| ||  ||||| ||  |||| ||||||| | |||||||||||||||||    
T  36614918 cctcaataaatgcaattatgcatgtggtaccaaaa--cagggccgaaaccctcaccgcttttgaatggttaaagcattc 36614994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 20852267 - 20852225
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataa 193  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  20852267 ctaagactcctcaacaaatgcaactatgcatgtggtaccataa 20852225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 20858893 - 20858851
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataa 193  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  20858893 ctaagactcctcaacaaatgcaactatgcatgtggtaccataa 20858851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 21705197 - 21705239
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataa 193  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  21705197 ctaagactcctcaacaaatgcaactatgcatgtggtaccataa 21705239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 21987210 - 21987128
Alignment:
Q  109 tcaatcaacaaatgcaactcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccat 191  Q
    |||||||||||   | ||||||| ||||||||||||   || |||| ||||||||| |||||| || ||||||||||||||||    
T  21987210 tcaatcaacaacaacgactcatgcaatgacatgacaacaccactaagactcctcaacaaatgcgactatgcatgtggtaccat 21987128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 23195673 - 23195592
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattc 237  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||| ||   ||| |||||||| | |||||||||||||||||    
T  23195673 actcctcaacaaatgcaaatatgcatgtggtaccat-attcagggccgaagccctcaccgctgtttgaatggttaaagcattc 23195592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 16371512 - 16371553
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  16371512 ctaagactcctcaacaaatgcaaccatgcatgtggtaccata 16371553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 23 - 250
Target Start/End: Complemental strand, 282 - 57
Alignment:
Q  23 tgaaaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataa-tcaacaacaatcatccagatataaaaattcaatcaacaaat 121  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||  | | ||  |||||||||||| |    
T  282 tgaaaatctaacaccttacaatatcaatgattattcaataagcataagtatttcataaatcaacaacaatcatccattttttaa--ttcaatcaacaa-t 186  T
Q  122 gcaactcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcg 221  Q
    | |  ||||   |||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  185 gtagttcatcttatgacacgacatcccccctaatactcctcaataaatgcaaatatgcatgtggtaccataatccagggccgtgatccacaccgctgtcg 86  T
Q  222 aatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||| ||| |||||||||    
T  85 aatggttaaagcattatcaacaggaccta 57  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 49879 - 49762
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||   ||||    
T  49879 aatctaacaccctacaataacaatgattatccaataggcataagtatttcataatcaacaacaatcatccagttatagcaattcaatcaacaataacaac 49780  T
Q  127 tcatgaaatgacatgaca 144  Q
    ||||| ||||||||||||    
T  49779 tcatgtaatgacatgaca 49762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 38381 - 38474
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38381 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 38474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 30342 - 30249
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30342 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 30249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 35743 - 35650
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35743 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 35650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 47176 - 47083
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47176 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 47083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 52581 - 52488
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52581 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 52488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 174758 - 174665
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  174758 actcctcaataaatgcaaatatgcatgtggtaccataat-cagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 174665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 41941 - 41777
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||   ||||||| ||||||   | ||    
T  41941 aatctaacaccctacaatatcaatgattattctatatgcgtaagtatttcataatcaacaac-atcatccagatattgcaattcaaccaacaacaactac 41843  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    ||||| ||||||||||||   || |||| ||||||| | ||||||||| |||||||||||||||||    
T  41842 tcatgtaatgacatgacaacacctctaagactcctcgacaaatgcaactatgcatgtggtaccata 41777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 103254 - 103035
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatcca-gatataaaaattcaatcaacaaatgcaa 125  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||| | |||| |  |||||| ||||||| ||||||   | |    
T  103254 aatctaacaccctaaaatatcaatgattattcaatatgcataagtatttcataatcaacaac-accatcaataatataacaattcaaccaacaacaacga 103156  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatg 225  Q
    |||||| ||||||||||||   || |||| ||||||| |||| |||||| |||||||||||||||| |||||||| ||   ||| |||  || |||||||    
T  103155 ctcatgcaatgacatgacaacacctctaagactcctcgataattgcaactatgcatgtggtaccat-attcagggccggagccctcacttctttcgaatg 103057  T
Q  226 gttaaagcattctcatcaggac 247  Q
    |||||||||||||  |||||||    
T  103056 gttaaagcattcttttcaggac 103035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1684 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 1340 - 1456
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||   ||||    
T  1340 aatctaacaccctacaatatcaatgattattctatatgcataagtatttcataatcaacaac-atcatccagatatagcaattcaaccaacaacaacaac 1438  T
Q  127 tcatgaaatgacatgaca 144  Q
    ||||| ||||||||||||    
T  1439 tcatgtaatgacatgaca 1456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 238
Target Start/End: Original strand, 1888 - 2100
Alignment:
Q  26 aaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatcca-gatataaaaattcaatcaacaaatgca 124  Q
    ||||||||||||||| || |||||||||||||| ||| ||||||||||||||||||||||||| | |||| |  |||||  ||||||| ||||||   |     
T  1888 aaatctaacaccctaaaatatcaatgattattctatatgcataagtatttcataatcaacaac-accatcaataatatagcaattcaaccaacaacaacg 1986  T
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaa 223  Q
    ||||||| ||||||||||||   || |||| ||||||| | ||||||||| |||||||||||||||| |||||||| ||   ||| |||||||  |||||    
T  1987 actcatgcaatgacatgacagcacctctaagactcctcgacaaatgcaactatgcatgtggtaccat-attcagggccggagccctcaccgctaatcgaa 2085  T
Q  224 tggttaaagcattct 238  Q
    |||||||||||||||    
T  2086 tggttaaagcattct 2100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 1408 - 1196
Alignment:
Q  26 aaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatcca-gatataaaaattcaatcaacaaatgca 124  Q
    ||||||||||||||| || |||||||||||||| ||| ||||||||||||||||||||||||| | |||| |  |||||  ||||||| ||||||   |     
T  1408 aaatctaacaccctaaaatatcaatgattattctatatgcataagtatttcataatcaacaac-accatcaataatatagcaattcaaccaacaacaacg 1310  T
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaa 223  Q
    ||||||| ||||||||||||   || |||| ||||||| | ||||||||| |||||||||||||||| |||||||| ||   ||| |||||||  |||||    
T  1309 actcatgcaatgacatgacagcacctctaagactcctcgacaaatgcaactatgcatgtggtaccat-attcagggccggagccctcaccgctaatcgaa 1211  T
Q  224 tggttaaagcattct 238  Q
    |||||||||||||||    
T  1210 tggttaaagcattct 1196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 8344 - 8132
Alignment:
Q  26 aaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatcca-gatataaaaattcaatcaacaaatgca 124  Q
    ||||||||||||||| || |||||||||||||| ||| ||||||||||||||||||||||||| | |||| |  |||||  ||||||| ||||||   |     
T  8344 aaatctaacaccctaaaatatcaatgattattctatatgcataagtatttcataatcaacaac-accatcaataatatagcaattcaaccaacaacaacg 8246  T
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaa 223  Q
    ||||||| ||||||||||||   || |||| ||||||| | ||||||||| |||||||||||||||| |||||||| ||   ||| |||||||  |||||    
T  8245 actcatgcaatgacatgacagcacctctaagactcctcgacaaatgcaactatgcatgtggtaccat-attcagggccggagccctcaccgctaatcgaa 8147  T
Q  224 tggttaaagcattct 238  Q
    |||||||||||||||    
T  8146 tggttaaagcattct 8132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 10445 - 10365
Alignment:
Q  166 aaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10445 aaatgcaactatgcatgtggtaccata-ttcagggccgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 10365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 10148 - 10269
Alignment:
Q  123 caactcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcga 222  Q
    ||||||||| ||||||||||||  ||| |||| ||||||| |||| |||||| |||| |||||||||||| ||||||| |||||||||| ||||||||||    
T  10148 caactcatgtaatgacatgacac-ccctctaagactcctcgataa-tgcaactatgcttgtggtaccata-ttcagggccgtgacccactccgctgtcga 10244  T
Q  223 atggttaaagcattctcatcaggac 247  Q
    |||||||||||||||||||||||||    
T  10245 atggttaaagcattctcatcaggac 10269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 37019 - 36924
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||||||||    
T  37019 ctaagactcctcaacaaatgcaactatgcatgtggtaccataat-cagggccatgacccacaccgctgtcgaatggttaaagcattcttatcaggac 36924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 44345 - 44133
Alignment:
Q  26 aaatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatcca-gatataaaaattcaatcaacaaatgca 124  Q
    ||||||||||||||| || |||||||||||||| ||| ||||||||||||||||||||||||| | |||| |  |||||  ||||||| ||||||   |     
T  44345 aaatctaacaccctaaaatatcaatgattattctatatgcataagtatttcataatcaacaac-accatcaataatatagcaattcaaccaacaacaacg 44247  T
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaa 223  Q
    ||||||| ||||||||||||   || |||| ||||||| | ||||||||| || ||||||||||||| |||||||| |    ||| |||||||  |||||    
T  44246 actcatgcaatgacatgacagcacctctaagactcctcgacaaatgcaactatccatgtggtaccat-attcagggccagagccctcaccgctaatcgaa 44148  T
Q  224 tggttaaagcattct 238  Q
    |||||||||||||||    
T  44147 tggttaaagcattct 44133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 8538 - 8493
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcg 221  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||    
T  8538 atgcatgtggtaccaaaaatcagggccgtgacccacaccgctgtcg 8493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 17263 - 17099
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    |||||||||||||| || ||||||||||||||||||  |||||||||||||||||||||||| |||||| | |||||  ||||| | ||||||   | ||    
T  17263 aatctaacaccctaaaatatcaatgattattcaatatacataagtatttcataatcaacaac-atcatcaaaatatagcaattcgaccaacaaccacgac 17165  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    ||||| |||||| |||||   || |||| ||||||| | ||||||||| |||||||||||||||||    
T  17164 tcatgtaatgacttgacaacacctctaagactcctcgacaaatgcaactatgcatgtggtaccata 17099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 429 - 274
Alignment:
Q  90 atcatccagatataaaaattcaatcaacaaatgcaactcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtacc 189  Q
    |||||||||||| |  ||||||||||||||   ||||||||| ||||||||||||  ||| |||| ||||||| | ||||||||  ||||||||||||||    
T  429 atcatccagatacagcaattcaatcaacaataacaactcatgtaatgacatgacac-ccctctaagactcctcgacaaatgcaattatgcatgtggtacc 331  T
Q  190 ataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattctcatcaggac 247  Q
    ||  ||||||  |||  ||||||||||||||||||||||||||||||||  |||||||    
T  330 atg-ttcaggaccgtagcccacaccgctgtcgaatggttaaagcattcttttcaggac 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 115587 - 115806
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcat-aatcaacaacaatcatc-cagatataaaaattcaatcaacaaatgca 124  Q
    |||||||||||||| || |||||||||||||| ||| ||||||||||||||| |||||||||| ||| ||  | |||||  ||||||| ||||||         
T  115587 aatctaacacccta-aatatcaatgattattccatatgcataagtatttcataaatcaacaac-atcctcaaatatatagcaattcaaccaacaacaaag 115684  T
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaat 224  Q
    ||||||| ||||||||||||   || |||| ||||||| | || |||||| |||||||||||||||| ||| |||| ||   ||| |||| || ||||||    
T  115685 actcatgcaatgacatgacaacacctctaagactcctcgacaattgcaactatgcatgtggtaccat-atttagggccggagccctcaccactatcgaat 115783  T
Q  225 ggttaaagcattctcatcaggac 247  Q
    ||||||||||||||  |||||||    
T  115784 ggttaaagcattcttttcaggac 115806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 129923 - 129858
Alignment:
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtacca 190  Q
    ||||||| ||||||||||||   || |||| ||||||||| |||||| || |||||||||||||||    
T  129923 actcatgcaatgacatgacaacacctctaagactcctcaacaaatgcgactatgcatgtggtacca 129858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 741 - 577
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatccagatataaaaattcaatcaacaaatgcaac 126  Q
    |||||||||||||| || ||||||||||||||||||  |||||||| ||||||||||||||| |||||| | |||||  ||||| | ||| ||   ||||    
T  741 aatctaacaccctaaaatatcaatgattattcaatatacataagtacttcataatcaacaac-atcatcaaaatatagcaattcgaccaagaaccacaac 643  T
Q  127 tcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    ||||| || ||| |||||   || |||| || ||||   ||||||||| |||||||||||||||||    
T  642 tcatgtaacgacttgacaacacctctaagacccctcggcaaatgcaactatgcatgtggtaccata 577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 8 - 56
Alignment:
Q  202 cgtgacccacaccgctgtcgaatggttaaagcattctcatcaggaccta 250  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8 cgtgacccacaccgctgtcgaatggttaaagcattctcaacaggaccta 56  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 8131 - 7970
Alignment:
Q  31 taacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatcca-gatataaaaattcaatcaacaaatgcaactca 129  Q
    |||||||||| || |||||||||||||||||| |||||| | |||||||||||||||||| || | |  |||||  |||||||  || ||   | |||||    
T  8131 taacaccctaaaatatcaatgattattcaatatgcataactgtttcataatcaacaacaa-caacaataatatagcaattcaacaaaaaacaacgactca 8033  T
Q  130 tgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    || ||||||||||||   || |||| ||||||||| ||||||||| |||||| ||||||||||    
T  8032 tgcaatgacatgacaacacctctaagactcctcaacaaatgcaactatgcatatggtaccata 7970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 14999 - 14914
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    |||| ||||||||| ||||||||| |||||||||||||||||  |||||| ||   ||| ||||| | | ||||||||||||||||||    
T  14999 ctaagactcctcaacaaatgcaactatgcatgtggtaccata--tcagggccgaagccctcaccgttatagaatggttaaagcattct 14914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 17600 - 17518
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattct 238  Q
    ||||||||||||||||||  |||||||||||||||| |||||||| ||  |||| |||||||| ||||||||||||| ||||||    
T  17600 actcctcaataaatgcaaatatgcatgtggtaccat-attcagggccgaaaccctcaccgctgatcgaatggttaaaacattct 17518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 10304 - 10222
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaatggttaaagcattct 238  Q
    ||||||||||||||||||  |||||||||||||||| |||||||| ||   ||| |||||||  ||||||||||||||||||||    
T  10304 actcctcaataaatgcaaatatgcatgtggtaccat-attcagggccgaagccctcaccgctaatcgaatggttaaagcattct 10222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 35927 - 35886
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  35927 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 35886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 4370 - 4285
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    |||| ||||||||| ||||||||| |||||||||||||||||  |||||| |||  ||| ||||| | | ||||||||||||||||||    
T  4370 ctaagactcctcaacaaatgcaactatgcatgtggtaccata--tcagggccgttgccctcaccgttatagaatggttaaagcattct 4285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 8407 - 8472
Alignment:
Q  173 acaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattct 238  Q
    ||||||||||||||||||||| |||||||||   ||| |||||||| ||||||||||||||||||||    
T  8407 acaatgcatgtggtaccataa-tcagggtcgcagccctcaccgctgttcgaatggttaaagcattct 8472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 589 - 509
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    |||||||||||||| |||  |||||||||||||||| |||||||| |||  ||| |||| |||| ||||| |||||||||||    
T  589 actcctcaataaatacaaatatgcatgtggtaccat-attcagggccgtagccctcaccactgtagaatgattaaagcattc 509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 19630 - 19565
Alignment:
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtacca 190  Q
    ||||||| |||||||||||||  || |||| ||||||||| |||||| || |||||||||||||||    
T  19630 actcatgcaatgacatgacatcacctctaagactcctcaacaaatgcgactatgcatgtggtacca 19565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 27943 - 28008
Alignment:
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtacca 190  Q
    ||||||| ||||||||||||   || |||| ||||||||| |||||| ||||||||||||||||||    
T  27943 actcatgcaatgacatgacaacacctctaagactcctcaacaaatgcgacaatgcatgtggtacca 28008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 5184 - 5124
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||| ||   ||| ||||||||| |||||||||||||||||    
T  5184 atgcatgtggtaccataat-cagggccgaagccctcaccgctgtagaatggttaaagcattc 5124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 10341 - 10401
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||| |||  ||| ||||||||| |||||||||||||||||    
T  10341 atgcatgtggtaccataat-cagggccgtagccctcaccgctgtagaatggttaaagcattc 10401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 1137 - 1299
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaacaatcatcca-gatataaaaattcaatcaacaaatgcaa 125  Q
    |||||||||||||| || |||||||||| ||||||| |||||  |||||||| ||||||| | |||||| |  ||||   ||||||| ||||||   | |    
T  1137 aatctaacaccctaaaatatcaatgattcttcaatatgcatatatatttcattatcaacagc-atcatcaataatatggcaattcaaccaacaacaacga 1235  T
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtacca 190  Q
    |||||| ||||||||||||   || |||| |||||||||  ||||| || |||||||||||||||    
T  1236 ctcatgcaatgacatgacaacacctctaagactcctcaa-caatgcgacgatgcatgtggtacca 1299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 47591 - 47528
Alignment:
Q  174 caatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    ||||||||||||||||||||| ||||  |||  ||| ||||| ||||||||||||||||||||||    
T  47591 caatgcatgtggtaccataat-caggaccgtagccctcaccgttgtcgaatggttaaagcattct 47528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 56625 - 56562
Alignment:
Q  174 caatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    ||||||||||||||||||||| ||||  |||  ||| ||||| ||||||||||||||||||||||    
T  56625 caatgcatgtggtaccataat-caggaccgtagccctcaccgttgtcgaatggttaaagcattct 56562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 63011 - 62948
Alignment:
Q  174 caatgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattct 238  Q
    ||||||||||||||||||||| ||||  |||  ||| ||||| ||||||||||||||||||||||    
T  63011 caatgcatgtggtaccataat-caggaccgtagccctcaccgttgtcgaatggttaaagcattct 62948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 4353 - 4286
Alignment:
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    ||||||| ||||||||||||   || |||| ||||||| | ||||||||| |||||||||||||||||    
T  4353 actcatgcaatgacatgacaacaccactaagactcctcgacaaatgcaactatgcatgtggtaccata 4286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 1870 - 1956
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaatggttaaagcattc 237  Q
    |||| ||||||||| ||||||||| |||||||||||||||| |||||||| ||   ||| |||||||  | |||||||||||||||||    
T  1870 ctaagactcctcaacaaatgcaactatgcatgtggtaccat-attcagggccgaagccctcaccgctaattgaatggttaaagcattc 1956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 3499 - 3434
Alignment:
Q  173 acaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattct 238  Q
    |||||||||||| ||||||| ||||||||||   |||||||||||  ||||||||||||||||||||    
T  3499 acaatgcatgtgataccata-ttcagggtcggagcccacaccgctaatcgaatggttaaagcattct 3434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 44197 - 44262
Alignment:
Q  173 acaatgcatgtggtaccataattcagggtcgtgacccacaccgct-gtcgaatggttaaagcattct 238  Q
    ||||||||||||||||||| |||||||||||   ||| |||||||  ||||||||||||||||||||    
T  44197 acaatgcatgtggtaccat-attcagggtcggagccctcaccgctaatcgaatggttaaagcattct 44262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 26071 - 26152
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattc 237  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||| ||   ||| |||||||| | |||||||||||||||||    
T  26071 actcctcaacaaatgcaaatatgcatgtggtaccat-attcagggccgaagccctcaccgctgtttgaatggttaaagcattc 26152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 27453 - 27534
Alignment:
Q  156 actcctcaataaatgcaacaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattc 237  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||| ||   ||| |||||||| | |||||||||||||||||    
T  27453 actcctcaacaaatgcaaatatgcatgtggtaccat-attcagggccgaagccctcaccgctgtttgaatggttaaagcattc 27534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 50979 - 51041
Alignment:
Q  27 aatctaacaccctacaacatcaatgattattcaataggcataagtatttcataatcaacaaca 89  Q
    |||||||||||||| || |||||||||||| |||||  ||||  ||| |||||||||||||||    
T  50979 aatctaacaccctaaaatatcaatgattatccaatatacatatatatctcataatcaacaaca 51041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 97569 - 97503
Alignment:
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccat 191  Q
    ||||||| ||||||||||||   || |||| ||||||||| |||||| || ||||||||||||||||    
T  97569 actcatgcaatgacatgacaacaccactaagactcctcaacaaatgcgactatgcatgtggtaccat 97503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 156947 - 156882
Alignment:
Q  173 acaatgcatgtggtaccataattcagggtcgtgacccacaccgctg-tcgaatggttaaagcattct 238  Q
    |||||||||||||||||||| ||||||||||   ||| |||||||  ||||||||||||||||||||    
T  156947 acaatgcatgtggtaccata-ttcagggtcgaagccctcaccgctaatcgaatggttaaagcattct 156882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 51 - 10
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  51 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 3051 - 3010
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  3051 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 3010  T

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Target: scaffold0535 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 6208 - 6148
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  6208 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 6148  T

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Target: scaffold0352 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 4543 - 4478
Alignment:
Q  125 actcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtacca 190  Q
    ||||||| ||||||||||||   || |||| ||||||||| |||||| || |||||||||||||||    
T  4543 actcatgcaatgacatgacaacacctctaagactcctcaacaaatgcgactatgcatgtggtacca 4478  T

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Target: scaffold0317 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 150 - 191
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  150 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 191  T

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Target: scaffold0239 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 14673 - 14613
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  14673 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 14613  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 16248 - 16207
Alignment:
Q  151 ctaatactcctcaataaatgcaacaatgcatgtggtaccata 192  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  16248 ctaagactcctcaacaaatgcaactatgcatgtggtaccata 16207  T

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Target: scaffold0114 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 41931 - 41991
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  41931 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 41991  T

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Target: scaffold0071 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 51148 - 51088
Alignment:
Q  176 atgcatgtggtaccataattcagggtcgtgacccacaccgctgtcgaatggttaaagcattc 237  Q
    ||||||||||||||||||| ||||  |||  ||| ||||||||| |||||||||||||||||    
T  51148 atgcatgtggtaccataat-caggaccgtagccctcaccgctgtagaatggttaaagcattc 51088  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 43124 - 43059
Alignment:
Q  126 ctcatgaaatgacatgacattccccctaatactcctcaataaatgcaacaatgcatgtggtaccat 191  Q
    |||||| ||||||||||||   || |||| ||||||||| |||||| || ||||||||||||||||    
T  43124 ctcatgcaatgacatgacaacaccactaagactcctcaacaaatgcgactatgcatgtggtaccat 43059  T

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