View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8901_low_171 (Length: 233)

Name: NF8901_low_171
Description: NF8901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8901_low_171
NF8901_low_171
[»] chr8 (3 HSPs)
chr8 (45-229)||(1735317-1735501)
chr8 (42-229)||(17422845-17423032)
chr8 (39-220)||(22348764-22348945)
[»] chr7 (3 HSPs)
chr7 (42-229)||(14342647-14342834)
chr7 (35-177)||(18133578-18133720)
chr7 (36-208)||(18171646-18171818)
[»] chr3 (5 HSPs)
chr3 (34-229)||(14693217-14693412)
chr3 (35-229)||(10782166-10782360)
chr3 (45-229)||(7401977-7402161)
chr3 (42-226)||(13306870-13307054)
chr3 (36-223)||(10150798-10150985)
[»] scaffold0022 (1 HSPs)
scaffold0022 (36-223)||(11371-11558)
[»] scaffold0319 (1 HSPs)
scaffold0319 (36-220)||(9650-9834)
[»] chr2 (4 HSPs)
chr2 (36-220)||(22638328-22638512)
chr2 (36-220)||(23200629-23200813)
chr2 (36-220)||(23626258-23626442)
chr2 (42-220)||(24911914-24912091)
[»] scaffold0016 (1 HSPs)
scaffold0016 (36-220)||(126559-126743)
[»] chr4 (2 HSPs)
chr4 (36-223)||(13289364-13289551)
chr4 (45-220)||(14772567-14772742)
[»] scaffold0241 (1 HSPs)
scaffold0241 (45-220)||(11493-11668)
[»] scaffold0130 (1 HSPs)
scaffold0130 (36-208)||(43155-43327)
[»] scaffold0108 (1 HSPs)
scaffold0108 (45-223)||(26227-26405)
[»] chr1 (2 HSPs)
chr1 (42-220)||(22805838-22806016)
chr1 (35-129)||(41380414-41380508)
[»] chr6 (2 HSPs)
chr6 (36-220)||(19035178-19035362)
chr6 (36-202)||(23435115-23435281)
[»] scaffold0001 (1 HSPs)
scaffold0001 (37-220)||(126760-126943)
[»] scaffold0005 (1 HSPs)
scaffold0005 (60-220)||(67003-67163)
[»] scaffold0040 (1 HSPs)
scaffold0040 (37-220)||(29633-29816)
[»] scaffold0282 (1 HSPs)
scaffold0282 (42-220)||(5538-5716)
[»] chr5 (1 HSPs)
chr5 (42-220)||(21511006-21511184)
[»] scaffold0064 (1 HSPs)
scaffold0064 (45-223)||(37590-37768)
[»] scaffold0026 (1 HSPs)
scaffold0026 (42-220)||(138973-139151)
[»] scaffold0023 (2 HSPs)
scaffold0023 (42-150)||(65268-65376)
scaffold0023 (42-150)||(74446-74554)
[»] scaffold0656 (1 HSPs)
scaffold0656 (50-220)||(5065-5235)
[»] scaffold0019 (1 HSPs)
scaffold0019 (42-199)||(159086-159243)
[»] scaffold0107 (1 HSPs)
scaffold0107 (42-109)||(1874-1941)
[»] scaffold0053 (1 HSPs)
scaffold0053 (105-199)||(42285-42379)
[»] scaffold0013 (4 HSPs)
scaffold0013 (144-199)||(83915-83970)
scaffold0013 (144-199)||(121587-121642)
scaffold0013 (129-199)||(75471-75541)
scaffold0013 (144-226)||(148842-148924)
[»] scaffold0046 (1 HSPs)
scaffold0046 (127-226)||(33649-33748)


Alignment Details
Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 45 - 229
Target Start/End: Original strand, 1735317 - 1735501
Alignment:
Q  45 cagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgaggaga 144  Q
    ||||||||||||||||| ||||||||||| |||||||||||   ||||||| ||||||||||||||||||||||| |||| || |||||||| |||||||    
T  1735317 cagaaagctgtgttcgagatggttaagaagccagcaacagaacgaatttcacccccattgtcaattctgaagaaagatcattcaaaagaagacgaggaga 1735416  T
Q  145 tgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgtcca 229  Q
    |||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||    
T  1735417 tgacttcaaatttcacggaatctgacccaagtcttgacatagtctgtaatgtggtttccatcttgcctgtggaatacgatgtcca 1735501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 17423032 - 17422845
Alignment:
Q  42 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 141  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||  |||||||| ||||  ||||||| |||||||    
T  17423032 aagcagaaagaggtgttcgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaatcttgaagaaagatcatcccaaagaggatgagg 17422933  T
Q  142 agatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgtcca 229  Q
    |||||||||| |||||||| | |||||| || || || ||||||||||||||||||||||| ||||| ||||||||||| ||||||||    
T  17422932 agatgacttcgaatttcacgggatctgacccgagcctcgacatagtttgcaatgtggtttctatcctacctgtggaatacgatgtcca 17422845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 39 - 220
Target Start/End: Complemental strand, 22348945 - 22348764
Alignment:
Q  39 ggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatg 138  Q
    ||||||||||||| |||||||||||||||||| |||||||||| ||||| ||| ||| |||||||||||||| | |||||| ||||  ||||||| ||||    
T  22348945 ggcaagcagaaagttgtgttcgaaatggttaaaaaaccagcaatagagagaatctcacccccattgtcaattttaaagaaagatcatcccaaagaggatg 22348846  T
Q  139 aggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    | || ||||||||||||||||  | |||||| || |||||||| || || |||||||||||||| ||||| |||||| ||||    
T  22348845 aagaaatgacttcaaatttcattggatctgaccccagtcttgatatcgtatgcaatgtggtttcgatcctacctgtgaaata 22348764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 14342834 - 14342647
Alignment:
Q  42 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 141  Q
    |||||||||||||||||||||||||||||||||||||||||| | | ||||||| |||||||||||||| |||||||| ||   |||||||| |||||||    
T  14342834 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacaaaaagaatttcacccccattgtcaattttgaagaaagattgttccaaagaggatgagg 14342735  T
Q  142 agatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgtcca 229  Q
    ||||||||||||||||||| |||||||| || || || ||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  14342734 agatgacttcaaatttcacggaatctgacccgagcctcgacatagtttgcaatgtggtttcaatcctgcctgtggaatacgatgtcca 14342647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 35 - 177
Target Start/End: Complemental strand, 18133720 - 18133578
Alignment:
Q  35 ggagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaa 134  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| |||  |||||||||    
T  18133720 ggagggcaagcaaaaagttgtgttcgagatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcgttccaaagaa 18133621  T
Q  135 gatgaggagatgacttcaaatttcacagaatctgatccaagtc 177  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  18133620 gatgaggagatgacttcaaatttcacggaatctgacccaagtc 18133578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 36 - 208
Target Start/End: Complemental strand, 18171818 - 18171646
Alignment:
Q  36 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 135  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||| | ||||||  |||||||||||||  |||||||| ||||  |||| || |    
T  18171818 gagggtaagcagaaagctgtgttcgaaatggttaaaaaaccagcaacagaaagaatttcgcccccattgtcaatcttgaagaaagatcatcccaaggagg 18171719  T
Q  136 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcct 208  Q
    |||| || |||||||| |||||||| | |||||| || ||||| |||||||| | |||||||||||| |||||    
T  18171718 atgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtacaatgtggtttctatcct 18171646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 4e-59; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 34 - 229
Target Start/End: Complemental strand, 14693412 - 14693217
Alignment:
Q  34 cggagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaaga 133  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||  |||||||| | || ||||||||    
T  14693412 cggaggacaagcagaaagccgtgttcgaaatggttaaaaaaccagcaacagagagaatttcacccccattgtcaatcttgaagaaagaccattccaaaga 14693313  T
Q  134 agatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgtcca 229  Q
     ||| |||||||||||||||||||||| |||||||| ||||  || ||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  14693312 ggataaggagatgacttcaaatttcacggaatctgacccaaacctcgacatagtttgcaatgtggtttctatcttgcctgtggaatacgatgtcca 14693217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 35 - 229
Target Start/End: Original strand, 10782166 - 10782360
Alignment:
Q  35 ggagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaa 134  Q
    ||||| |||||||||||||||||| || ||||||||||| ||||||||||||  ||||||  |||||||||| ||||||| |||| ||||  | ||||||    
T  10782166 ggaggacaagcagaaagctgtgtttgagatggttaagaagccagcaacagagcgaatttcgcccccattgtcgattctgatgaaagatcatccaaaagaa 10782265  T
Q  135 gatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgtcca 229  Q
    |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  10782266 gatgaggaaatgacttcgaatttcacagaatctgacccaagtcttgacatagtttgtaatgtggtttccattttgcctgtggaatatgatgtcca 10782360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 45 - 229
Target Start/End: Complemental strand, 7402161 - 7401977
Alignment:
Q  45 cagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgaggaga 144  Q
    |||||||||||||||||||||||||||||  |||||||||| | ||||||| |||||||||||||| |||||||  ||   |||||||| ||||||||||    
T  7402161 cagaaagctgtgttcgaaatggttaagaaggcagcaacagaaagaatttcacccccattgtcaattttgaagaagtattgttccaaagaggatgaggaga 7402062  T
Q  145 tgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgtcca 229  Q
    |||||||||||||||| |||| ||| || ||||| ||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  7402061 tgacttcaaatttcacggaatgtgacccgagtctcgacatagtttgcaatgtggtttcaatcctgcctgaggaatacgatgtcca 7401977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 13307054 - 13306870
Alignment:
Q  42 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 141  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| |||||||| ||||  ||||||| ||||| |    
T  13307054 aagcagaaaactgtgttcgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaattttgaagaaagatcatcccaaagaggatgaag 13306955  T
Q  142 agatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgt 226  Q
    | |||||||| |||||||| | |||||| || ||||| || |||||||||||||||||||| ||||| || |||||||| |||||    
T  13306954 atatgacttcgaatttcacgggatctgaccctagtctcgatatagtttgcaatgtggtttctatcctaccggtggaatacgatgt 13306870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 36 - 223
Target Start/End: Original strand, 10150798 - 10150985
Alignment:
Q  36 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 135  Q
    ||||||||||  |||| |||||||||||||||||| |||||||  ||||||| ||| ||| |||||||||||||| |||||||| ||||  ||||||| |    
T  10150798 gagggcaagcgaaaagatgtgttcgaaatggttaaaaaaccagtcacagagagaatctcacccccattgtcaattttgaagaaagatcatcccaaagagg 10150897  T
Q  136 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatga 223  Q
    |||| || ||||||||||||||||| | |||||| || |||||||||||||| |||||||||||||| || || ||||||||||||||    
T  10150898 atgaagaaatgacttcaaatttcactggatctgaccccagtcttgacatagtatgcaatgtggtttctatactacctgtggaatatga 10150985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 36 - 223
Target Start/End: Original strand, 11371 - 11558
Alignment:
Q  36 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 135  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||  |||||||||||||| | |||||| ||||  ||||||| |    
T  11371 gagggtaagcagaaagctgtgttcgaaatggttaaaaaaccagcaacagagagaatctcgcccccattgtcaattttaaagaaagatcatcccaaagagg 11470  T
Q  136 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatga 223  Q
    |||| || ||||||||||||||||| |||||||| || |||||  ||||||| |||||||||||||| ||||| ||| ||||||||||    
T  11471 atgaagaaatgacttcaaatttcactgaatctgaccctagtctcaacatagtatgcaatgtggtttctatcctacctatggaatatga 11558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 36 - 220
Target Start/End: Original strand, 9650 - 9834
Alignment:
Q  36 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 135  Q
    ||||| ||||||||||||||||||||||||||||| || ||||||||||||| ||| ||| |||||||||||||| | |||||| | ||  ||||||| |    
T  9650 gagggtaagcagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattttaaagaaagaacatcccaaagagg 9749  T
Q  136 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    |||| || ||||||||||||||||| | |||||| || ||||| |||||||| |||||||||||||| ||||| |||||||||||    
T  9750 atgaagaaatgacttcaaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttctatcctacctgtggaata 9834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 36 - 220
Target Start/End: Original strand, 22638328 - 22638512
Alignment:
Q  36 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 135  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||  |||||||||||||| |||||||| ||||  ||||||| |    
T  22638328 gagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaaagagg 22638427  T
Q  136 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    |||| || |||||||| |||||||| | |||||| || ||||| |||||||| |||||||||||||| ||||| || ||||||||    
T  22638428 atgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcctaccggtggaata 22638512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 36 - 220
Target Start/End: Complemental strand, 23200813 - 23200629
Alignment:
Q  36 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 135  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||  |||||||||||||| |||||||| ||||  ||||||| |    
T  23200813 gagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaaagagg 23200714  T
Q  136 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    |||| || |||||||| |||||||| | |||||| || ||||| || ||||| |||||||||||||| ||||| || ||||||||    
T  23200713 atgaagaaatgacttcgaatttcacgggatctgaccctagtctcgatatagtgtgcaatgtggtttctatcctaccggtggaata 23200629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 36 - 220
Target Start/End: Complemental strand, 23626442 - 23626258
Alignment:
Q  36 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 135  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||||||  |||| ||| ||||  |||| || |    
T  23626442 gagggtaagcagaaagctgtgttcaaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaatattgaaaaaagatcatcccaaggagg 23626343  T
Q  136 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    |||  || |||||||| |||||||| | |||||| || ||||| |||||||| |||||||||||||| ||||| || ||||||||    
T  23626342 atgtagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcctaccggtggaata 23626258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 220
Target Start/End: Original strand, 24911914 - 24912091
Alignment:
Q  42 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 141  Q
    ||||||| |||||| |||||||||||||| |||||||||||| ||| ||||||| |||| ||||||||  | |||||  | ||  ||||||| ||||| |    
T  24911914 aagcagagagctgttttcgaaatggttaaaaaaccagcaacaaagagaatttcaccccc-ttgtcaatcttaaagaaggaccatcccaaagaggatgaag 24912012  T
Q  142 agatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    | ||||||||||||||||| | |||||| || ||||| |||||||| ||||||||||| || || ||  ||||||||||    
T  24912013 aaatgacttcaaatttcactggatctgaccccagtctcgacatagtatgcaatgtggtatcaattctatctgtggaata 24912091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 36 - 220
Target Start/End: Complemental strand, 126743 - 126559
Alignment:
Q  36 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 135  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||  |||||||||||||| |||||||| ||||  ||||||| |    
T  126743 gagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaaagagg 126644  T
Q  136 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    |||| || |||||||| |||||||| | |||||| || ||||| || ||||| |||||||||||||| ||||| || ||||||||    
T  126643 atgaagaaatgacttcgaatttcactggatctgaccctagtctcgatatagtgtgcaatgtggtttctatcctaccggtggaata 126559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 223
Target Start/End: Complemental strand, 13289551 - 13289364
Alignment:
Q  36 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 135  Q
    ||||| ||||||||||||||||||||||||||||| || ||||||||||||| ||| ||  |||||||||||||| | |||||| ||||  ||||||| |    
T  13289551 gagggtaagcagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcgcccccattgtcaattttaaagaaagatcatcccaaagagg 13289452  T
Q  136 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatga 223  Q
    |||| || |||||||| |||||||| | |||||| || ||||| |||||||| |||||||||||||| ||||| ||| ||||||||||    
T  13289451 atgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttctatcctacctttggaatatga 13289364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 45 - 220
Target Start/End: Complemental strand, 14772742 - 14772567
Alignment:
Q  45 cagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgaggaga 144  Q
    |||| |||||| |||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||| |||||| ||||  ||||||| ||||| || |    
T  14772742 cagagagctgtattcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaa 14772643  T
Q  145 tgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    |||||||||||||||| | |||||| || ||||| || ||||| ||||||||||| || ||||| |||||||||||    
T  14772642 tgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcgatcctacctgtggaata 14772567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 45 - 220
Target Start/End: Original strand, 11493 - 11668
Alignment:
Q  45 cagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgaggaga 144  Q
    ||||||||||| |||||||||||||| |||||||||||||||| ||| ||| |||||||||||||| | |||||| ||||  ||||||| ||||| || |    
T  11493 cagaaagctgtattcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattataaagaaagatcatcccaaagaggatgaagaaa 11592  T
Q  145 tgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    |||||||||||||||| | |||||| || |||||||| || || ||||||||||| || ||||| |||||||||||    
T  11593 tgacttcaaatttcactggatctgaccccagtcttgatatcgtatgcaatgtggtctcaatcctacctgtggaata 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 36 - 208
Target Start/End: Original strand, 43155 - 43327
Alignment:
Q  36 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 135  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||  |||||||||||||| |||||||| ||||  |||| || |    
T  43155 gagggtaagcagaaagctgtgttcaaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaaggagg 43254  T
Q  136 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcct 208  Q
    |||| ||  ||||||| |||||||| | |||||| || ||||| |||||||| |||||||||||||| |||||    
T  43255 atgaagaactgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcct 43327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 45 - 223
Target Start/End: Original strand, 26227 - 26405
Alignment:
Q  45 cagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaa-aatcactccaaagaagatgaggag 143  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||| ||| |||||||||||||| |||||||| | || || ||| || ||||| |||    
T  26227 cagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattttgaagaaagactctct-caaggaggatgaagag 26325  T
Q  144 atgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatga 223  Q
    |||||||| |||||||| | |||||| || ||||| |||||||| ||||| ||||| |||||||| ||||||||||||||    
T  26326 atgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaacgtggtgtccatcctacctgtggaatatga 26405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 42 - 220
Target Start/End: Complemental strand, 22806016 - 22805838
Alignment:
Q  42 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 141  Q
    ||||||| |||||| || ||||||||||| |||||||||||||||| ||| ||| |||||||||||||||| |||||| ||||  ||||||| ||||| |    
T  22806016 aagcagagagctgtatttgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaag 22805917  T
Q  142 agatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    | ||||||||||||||||| | |||||| || | ||| || ||||| ||||||||||| || ||||| |||||||||||    
T  22805916 aaatgacttcaaatttcactggatctgaccccaatctcgatatagtatgcaatgtggtctcaatcctacctgtggaata 22805838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 41380508 - 41380414
Alignment:
Q  35 ggagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactcca 129  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||  ||||||| |||||||||||||| |||||||| |||| ||||    
T  41380508 ggagggcaagcagaaagctgtgttcgagatggttaagaagccagcaacagagcgaatttcacccccattgtcaattttgaagaaagatcattcca 41380414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 36 - 220
Target Start/End: Complemental strand, 19035362 - 19035178
Alignment:
Q  36 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 135  Q
    ||||||||||| |||||| |||||||||| ||||| |||||||||||||||| ||| ||||| |||||||||||| ||||||||||| |  ||||| | |    
T  19035362 gagggcaagcaaaaagctatgttcgaaatagttaaaaaaccagcaacagagagaatctcatctccattgtcaattttgaagaaaaataatcccaaaaagg 19035263  T
Q  136 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    |||| || |||||||| |||||||| | |||||| || |||||||| ||  | ||||||||||| || ||||| |||||||||||    
T  19035262 atgaagaaatgacttcgaatttcactggatctgaccccagtcttgatattatatgcaatgtggtctcgatcctacctgtggaata 19035178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 202
Target Start/End: Original strand, 23435115 - 23435281
Alignment:
Q  36 gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaag 135  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||| ||||| ||| ||  |||||||||||||| |||||||| ||||  |||| || |    
T  23435115 gagggtaagcagaaggttgtgttcgaaatggttaagaaaccagcaatagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaaggagg 23435214  T
Q  136 atgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttc 202  Q
    |||| || |||||||| |||||||| | |||||| || ||||| |||||||| ||||||||||||||    
T  23435215 atgaagaaatgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttc 23435281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 220
Target Start/End: Complemental strand, 126943 - 126760
Alignment:
Q  37 agggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaaga 136  Q
    |||| ||||||||||| ||||||||||||||||| |||||| ||||||||| ||| ||| ||||||||| |||| | |||||| ||||  |||| || ||    
T  126943 agggaaagcagaaagcggtgttcgaaatggttaaaaaaccaacaacagagagaatctcacccccattgtgaattttaaagaaagatcatcccaatgagga 126844  T
Q  137 tgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    ||| || ||||||||||||||||| | |||||| || |||||||| || || ||||||||||| || ||||| |||||||||||    
T  126843 tgaagaaatgacttcaaatttcacgggatctgaccccagtcttgatatcgtatgcaatgtggtctcgatcctacctgtggaata 126760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 60 - 220
Target Start/End: Original strand, 67003 - 67163
Alignment:
Q  60 gaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttca 159  Q
    ||||||||| | |||||||||||||||| ||| ||| |||||||||||||||| |||||| ||||  ||||||| ||||| || ||||||||||||||||    
T  67003 gaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttca 67102  T
Q  160 cagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    | | |||||| || ||||| || ||||| ||||||||||| || ||||| |||||||||||    
T  67103 ctggatctgaccccagtctcgatatagtatgcaatgtggtctcaatcctacctgtggaata 67163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 37 - 220
Target Start/End: Original strand, 29633 - 29816
Alignment:
Q  37 agggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaaga 136  Q
    |||||||||| |||| |||||||||||||||||| |||||||| | ||||| ||| ||| |||| ||||||||| |||||||| ||||  ||||||| ||    
T  29633 agggcaagcaaaaagatgtgttcgaaatggttaaaaaaccagccatagagagaatctcacccccgttgtcaattttgaagaaagatcatcccaaagagga 29732  T
Q  137 tgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    ||| || ||||| ||| ||||||| | |||||| || || || |||||||| |||||||||||||| ||||| || ||||||||    
T  29733 tgaagaaatgacctcagatttcaccggatctgaccccagcctagacatagtatgcaatgtggtttctatcctaccagtggaata 29816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 42 - 220
Target Start/End: Complemental strand, 5716 - 5538
Alignment:
Q  42 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 141  Q
    ||||||| || ||| || ||||||||| | |||||||||||||||| ||| ||| |||||||||||||||| |||||| ||||  ||||||| ||||| |    
T  5716 aagcagagagttgtatttgaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaag 5617  T
Q  142 agatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    | ||||||||||||||||| | |||||| || ||||| || ||||| ||||||||||| || || || |||||||||||    
T  5616 aaatgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcaattctacctgtggaata 5538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 42 - 220
Target Start/End: Original strand, 21511006 - 21511184
Alignment:
Q  42 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 141  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||| | |||||| ||||  |||| || ||||| |    
T  21511006 aagcagaaagcggtgttcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattttaaagaaagatcatcccaaggaggatgaag 21511105  T
Q  142 agatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    | ||||||||||||||||| | |||||| || |||||||| ||  | ||||||||||| || ||| | | |||||||||    
T  21511106 aaatgacttcaaatttcactggatctgaccccagtcttgatatcatatgcaatgtggtctcgatcttacttgtggaata 21511184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 37768 - 37590
Alignment:
Q  45 cagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgaggaga 144  Q
    |||||||||||||||||||||||||| || ||||||||| ||| ||||||| |||||||||||||| |||||||| |     |||| || ||||| || |    
T  37768 cagaaagctgtgttcgaaatggttaaaaagccagcaacatagagaatttcacccccattgtcaattttgaagaaagactttcccaaggaggatgaagata 37669  T
Q  145 tgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatga 223  Q
    ||||||| |||||||| | |||||| || ||||| |||||||| || || ||||| || ||||| ||||||||||||||    
T  37668 tgacttcgaatttcactggatctgaccctagtctcgacatagtatgtaacgtggtgtctatcctacctgtggaatatga 37590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 220
Target Start/End: Complemental strand, 139151 - 138973
Alignment:
Q  42 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 141  Q
    ||||||| |||||| |||||||||||||| |||||||||||| |||  || ||| | || ||||||||  | |||||| | ||  ||||||| ||||| |    
T  139151 aagcagagagctgtattcgaaatggttaaaaaaccagcaacaaagaggatctcacctcccttgtcaatcttaaagaaagaccatcccaaagaggatgaag 139052  T
Q  142 agatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    | |||||||| |||||||| |  ||||| || ||||| |||||||| |||||||||||||| ||||| ||||| |||||    
T  139051 aaatgacttcgaatttcactgggtctgaccctagtctcgacatagtatgcaatgtggtttcaatcctacctgtagaata 138973  T

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Target: scaffold0023 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 65268 - 65376
Alignment:
Q  42 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 141  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| ||| | | |||||||||||||| | |||||| ||||  ||||||| ||||| |    
T  65268 aagcagaaagttgtgttcgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattttaaagaaagatcatcccaaagaggatgaag 65367  T
Q  142 agatgactt 150  Q
    | |||||||    
T  65368 aaatgactt 65376  T

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Target: scaffold0023; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 74446 - 74554
Alignment:
Q  42 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 141  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| ||| | | |||||||||||||| | |||||| ||||  ||||||| ||||| |    
T  74446 aagcagaaagttgtgttcgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattttaaagaaagatcatcccaaagaggatgaag 74545  T
Q  142 agatgactt 150  Q
    | |||||||    
T  74546 aaatgactt 74554  T

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Target: scaffold0656 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 5065 - 5235
Alignment:
Q  50 agctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgaggagatgact 149  Q
    |||||| |||||||||||||| || ||||||||||||| ||| ||| |||| ||||||||  | |||||| | ||  |||| || ||||| || ||||||    
T  5065 agctgttttcgaaatggttaaaaagccagcaacagagagaatctcaccccccttgtcaatcttaaagaaagaccatcccaaggaggatgaagaaatgact 5164  T
Q  150 tcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaata 220  Q
    || |||||||| | |||||| |  ||||| |||||||| ||||||||||| || || || |||||||||||    
T  5165 tcgaatttcactggatctgacctcagtctcgacatagtatgcaatgtggtatcaattctacctgtggaata 5235  T

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Target: scaffold0019 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 199
Target Start/End: Complemental strand, 159243 - 159086
Alignment:
Q  42 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaattctgaagaaaaatcactccaaagaagatgagg 141  Q
    ||||||||||| || || ||||||||||| || ||||||||||| | ||| ||| | || || |||||  |||||||||| ||  |||| || ||||| |    
T  159243 aagcagaaagccgtttttgaaatggttaaaaagccagcaacagaaagaatctcaccgcccttatcaatcttgaagaaaaaccatcccaaggaggatgaag 159144  T
Q  142 agatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggt 199  Q
    | |||||||| |||||||| | |||||| || ||||| |||||||| |||||||||||    
T  159143 aaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggt 159086  T

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Target: scaffold0107 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 1874 - 1941
Alignment:
Q  42 aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagaaaatttcatccccattgtcaat 109  Q
    ||||||| |||||| |||||||||||||| |||||||||||||||| ||| ||| |||| ||||||||    
T  1874 aagcagagagctgttttcgaaatggttaaaaaaccagcaacagagagaatctcaccccccttgtcaat 1941  T

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Target: scaffold0053 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 42379 - 42285
Alignment:
Q  105 tcaattctgaagaaaaatcactccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggt 199  Q
    |||||| |||||||||||||  | || || ||||| || ||||| || |||||||| ||||||||||||||||| || ||||| |||||||||||    
T  42379 tcaattttgaagaaaaatcatcctaaggaggatgaagaaatgacgtcgaatttcactgaatctgatccaagtctcgatatagtgtgcaatgtggt 42285  T

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Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 83915 - 83970
Alignment:
Q  144 atgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggt 199  Q
    ||||| |||||||||||||||||||| |||||||| || ||||| |||||||||||    
T  83915 atgacgtcaaatttcacagaatctgacccaagtctcgatatagtatgcaatgtggt 83970  T

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Target: scaffold0013; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 121587 - 121642
Alignment:
Q  144 atgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggt 199  Q
    ||||| |||||||||||||||||||| |||||||| || ||||| |||||||||||    
T  121587 atgacgtcaaatttcacagaatctgacccaagtctcgatatagtatgcaatgtggt 121642  T

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Target: scaffold0013; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 75471 - 75541
Alignment:
Q  129 aaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggt 199  Q
    ||||| ||||| || ||||| ||||||||||||||||||||  ||||||| || ||||| |||||||||||    
T  75471 aaagaggatgaagaaatgacgtcaaatttcacagaatctgactcaagtctcgatatagtatgcaatgtggt 75541  T

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Target: scaffold0013; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 148842 - 148924
Alignment:
Q  144 atgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgt 226  Q
    ||||| |||||||||||| ||||||| |||||||| || ||||| ||||||||||| || ||  ||| ||| |||||||||||    
T  148842 atgacgtcaaatttcacaaaatctgacccaagtctcgatatagtatgcaatgtggtatcaatattgcatgttgaatatgatgt 148924  T

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Target: scaffold0046 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 226
Target Start/End: Original strand, 33649 - 33748
Alignment:
Q  127 ccaaagaagatgaggagatgacttcaaatttcacagaatctgatccaagtcttgacatagtttgcaatgtggtttccatcctgcctgtggaatatgatgt 226  Q
    ||||||| ||||| || |||||||| |||||||  | |||||| || ||||| |||||||| ||||||||||| ||  |  ||||||||||||| |||||    
T  33649 ccaaagaggatgaagaaatgacttcgaatttcattggatctgaccccagtctcgacatagtgtgcaatgtggtgtcagttttgcctgtggaatacgatgt 33748  T

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