View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8901_low_54 (Length: 439)

Name: NF8901_low_54
Description: NF8901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8901_low_54
NF8901_low_54
[»] chr8 (44 HSPs)
chr8 (1-219)||(20022145-20022364)
chr8 (227-439)||(45471025-45471237)
chr8 (1-219)||(31722606-31722824)
chr8 (237-439)||(20024860-20025061)
chr8 (14-218)||(36727164-36727369)
chr8 (1-143)||(45469332-45469474)
chr8 (14-219)||(23900113-23900319)
chr8 (227-439)||(22318522-22318734)
chr8 (227-439)||(31723176-31723388)
chr8 (226-421)||(22244695-22244889)
chr8 (14-219)||(17906974-17907182)
chr8 (14-219)||(22254498-22254700)
chr8 (227-402)||(36727721-36727896)
chr8 (319-439)||(36727984-36728104)
chr8 (14-201)||(17218442-17218627)
chr8 (231-421)||(23947492-23947680)
chr8 (14-174)||(23948031-23948189)
chr8 (14-201)||(23419183-23419368)
chr8 (138-219)||(45470591-45470673)
chr8 (34-219)||(19699883-19700067)
chr8 (342-439)||(31723481-31723578)
chr8 (370-439)||(5760852-5760921)
chr8 (230-382)||(9491-9642)
chr8 (1-175)||(22318023-22318197)
chr8 (34-106)||(18761284-18761356)
chr8 (370-423)||(21346063-21346116)
chr8 (376-423)||(6102462-6102509)
chr8 (370-423)||(23914259-23914312)
chr8 (227-322)||(17217978-17218073)
chr8 (227-421)||(17907535-17907729)
chr8 (357-423)||(20084328-20084394)
chr8 (56-125)||(13661021-13661090)
chr8 (56-125)||(13719664-13719733)
chr8 (237-322)||(19699458-19699542)
chr8 (290-332)||(23450837-23450879)
chr8 (290-332)||(34301915-34301957)
chr8 (32-183)||(37516368-37516517)
chr8 (227-283)||(23900670-23900726)
chr8 (265-320)||(14103065-14103120)
chr8 (32-106)||(19928900-19928974)
chr8 (342-420)||(23889017-23889095)
chr8 (259-320)||(22253000-22253061)
chr8 (295-332)||(24495949-24495986)
chr8 (244-320)||(22963240-22963315)
[»] chr7 (46 HSPs)
chr7 (1-211)||(48807438-48807649)
chr7 (227-439)||(13132934-13133146)
chr7 (3-201)||(16078072-16078269)
chr7 (227-439)||(48809097-48809308)
chr7 (3-215)||(14219011-14219224)
chr7 (1-201)||(13132433-13132633)
chr7 (14-217)||(4071542-4071746)
chr7 (227-439)||(15096252-15096464)
chr7 (227-439)||(16077594-16077806)
chr7 (227-424)||(19557892-19558089)
chr7 (227-439)||(14219580-14219792)
chr7 (227-426)||(15139408-15139608)
chr7 (14-201)||(15288845-15289030)
chr7 (1-186)||(15139968-15140153)
chr7 (1-201)||(15095749-15095949)
chr7 (3-219)||(35771557-35771774)
chr7 (342-439)||(13133239-13133336)
chr7 (14-201)||(10658977-10659162)
chr7 (1-201)||(8135349-8135549)
chr7 (227-439)||(22000832-22001042)
chr7 (14-182)||(36704697-36704863)
chr7 (258-401)||(8135719-8135862)
chr7 (370-439)||(1489935-1490004)
chr7 (360-423)||(14929026-14929089)
chr7 (360-423)||(15352492-15352555)
chr7 (370-423)||(14258687-14258740)
chr7 (370-423)||(16460596-16460649)
chr7 (370-423)||(16579995-16580048)
chr7 (370-423)||(16585615-16585668)
chr7 (370-423)||(32301517-32301570)
chr7 (227-430)||(4071008-4071210)
chr7 (290-421)||(11053922-11054053)
chr7 (370-419)||(20487782-20487831)
chr7 (246-314)||(130637-130705)
chr7 (230-322)||(15281652-15281744)
chr7 (370-421)||(33001252-33001302)
chr7 (230-320)||(36705238-36705327)
chr7 (34-103)||(18074780-18074849)
chr7 (21-97)||(11054556-11054632)
chr7 (247-362)||(16996404-16996519)
chr7 (370-409)||(32434254-32434293)
chr7 (265-321)||(14036422-14036478)
chr7 (265-321)||(14044972-14045028)
chr7 (265-321)||(14346452-14346508)
chr7 (265-321)||(14355002-14355058)
chr7 (265-321)||(16091981-16092037)
[»] chr2 (25 HSPs)
chr2 (1-219)||(3539557-3539776)
chr2 (12-218)||(18390338-18390545)
chr2 (1-219)||(25141924-25142143)
chr2 (4-184)||(27852423-27852603)
chr2 (227-439)||(3539012-3539225)
chr2 (226-426)||(44071777-44071977)
chr2 (227-426)||(22259258-22259457)
chr2 (237-439)||(25141359-25141561)
chr2 (5-201)||(44072297-44072493)
chr2 (14-219)||(5985899-5986103)
chr2 (227-439)||(27851851-27852063)
chr2 (227-439)||(27860557-27860769)
chr2 (14-174)||(14694094-14694252)
chr2 (8-154)||(22259825-22259971)
chr2 (14-201)||(25045860-25046045)
chr2 (342-425)||(25141183-25141266)
chr2 (227-401)||(18390896-18391070)
chr2 (259-381)||(10897138-10897260)
chr2 (370-423)||(9784917-9784970)
chr2 (370-422)||(23069114-23069166)
chr2 (227-322)||(14693601-14693696)
chr2 (265-327)||(5985470-5985532)
chr2 (290-327)||(6477921-6477958)
chr2 (290-357)||(19358289-19358356)
chr2 (230-322)||(25045396-25045486)
[»] scaffold0628 (3 HSPs)
scaffold0628 (1-219)||(1171-1390)
scaffold0628 (227-393)||(4096-4260)
scaffold0628 (227-393)||(8656-8820)
[»] chr3 (47 HSPs)
chr3 (227-439)||(17258792-17259004)
chr3 (3-201)||(13185633-13185831)
chr3 (1-219)||(11563456-11563664)
chr3 (253-426)||(11562905-11563078)
chr3 (14-197)||(11885683-11885864)
chr3 (342-425)||(11192224-11192307)
chr3 (342-439)||(11562698-11562795)
chr3 (231-421)||(13179433-13179623)
chr3 (14-106)||(16050762-16050854)
chr3 (348-439)||(6155907-6155998)
chr3 (14-106)||(12509476-12509568)
chr3 (370-439)||(14441487-14441556)
chr3 (370-439)||(17046481-17046550)
chr3 (370-439)||(54876147-54876216)
chr3 (370-439)||(11192400-11192469)
chr3 (370-439)||(17691469-17691538)
chr3 (370-439)||(19569033-19569102)
chr3 (360-423)||(42353367-42353430)
chr3 (370-426)||(17685507-17685563)
chr3 (290-357)||(45531248-45531315)
chr3 (357-423)||(13519578-13519644)
chr3 (370-420)||(18700137-18700187)
chr3 (370-439)||(6156025-6156094)
chr3 (370-419)||(12470141-12470190)
chr3 (370-419)||(14671163-14671212)
chr3 (370-419)||(14682662-14682711)
chr3 (370-423)||(43889463-43889516)
chr3 (227-322)||(16059620-16059715)
chr3 (35-97)||(15447013-15447075)
chr3 (370-439)||(9511829-9511898)
chr3 (370-439)||(9519804-9519873)
chr3 (230-319)||(12512388-12512476)
chr3 (156-201)||(16050702-16050747)
chr3 (14-106)||(14250207-14250299)
chr3 (290-332)||(12158648-12158690)
chr3 (290-327)||(17548176-17548213)
chr3 (227-322)||(11886238-11886332)
chr3 (227-322)||(16044760-16044855)
chr3 (32-103)||(42324115-42324186)
chr3 (290-421)||(52338594-52338725)
chr3 (244-313)||(15447584-15447654)
chr3 (290-327)||(10550654-10550691)
chr3 (230-283)||(14250693-14250746)
chr3 (345-422)||(16059520-16059597)
chr3 (32-97)||(22146901-22146966)
chr3 (133-219)||(23052524-23052608)
chr3 (32-97)||(37641637-37641702)
[»] scaffold0031 (1 HSPs)
scaffold0031 (3-219)||(108017-108229)
[»] chr6 (29 HSPs)
chr6 (1-219)||(23501392-23501611)
chr6 (14-219)||(31732031-31732235)
chr6 (227-439)||(23500900-23501112)
chr6 (227-422)||(6083355-6083550)
chr6 (259-421)||(31735522-31735683)
chr6 (34-219)||(24550313-24550497)
chr6 (342-417)||(23491997-23492072)
chr6 (342-417)||(23497595-23497670)
chr6 (293-421)||(22212139-22212268)
chr6 (370-439)||(19655893-19655962)
chr6 (370-423)||(22806168-22806221)
chr6 (370-425)||(23491835-23491890)
chr6 (370-425)||(23497433-23497488)
chr6 (360-426)||(15705265-15705331)
chr6 (370-423)||(19773373-19773426)
chr6 (357-423)||(23655673-23655739)
chr6 (360-439)||(28947663-28947742)
chr6 (35-97)||(20177839-20177901)
chr6 (35-97)||(22158090-22158152)
chr6 (227-352)||(22376480-22376605)
chr6 (290-327)||(24267151-24267188)
chr6 (248-352)||(20077998-20078102)
chr6 (370-409)||(17318786-17318825)
chr6 (32-97)||(8226873-8226938)
chr6 (32-97)||(23532029-23532094)
chr6 (230-319)||(24550851-24550939)
chr6 (357-409)||(23655727-23655779)
chr6 (21-97)||(25753282-25753358)
chr6 (21-97)||(25755452-25755528)
[»] scaffold1695 (2 HSPs)
scaffold1695 (227-439)||(635-847)
scaffold1695 (159-201)||(1147-1189)
[»] scaffold0008 (3 HSPs)
scaffold0008 (227-439)||(136184-136396)
scaffold0008 (3-186)||(135618-135801)
scaffold0008 (160-201)||(135825-135866)
[»] scaffold0004 (3 HSPs)
scaffold0004 (14-201)||(109914-110100)
scaffold0004 (227-439)||(109438-109650)
scaffold0004 (290-327)||(59733-59770)
[»] chr5 (23 HSPs)
chr5 (3-219)||(21618043-21618257)
chr5 (227-439)||(21618608-21618819)
chr5 (227-424)||(29914562-29914759)
chr5 (14-201)||(10953831-10954016)
chr5 (344-426)||(20565696-20565778)
chr5 (14-200)||(25249953-25250137)
chr5 (14-200)||(25313737-25313921)
chr5 (227-430)||(20469692-20469895)
chr5 (14-95)||(20469302-20469383)
chr5 (357-423)||(32608055-32608121)
chr5 (78-219)||(29915010-29915152)
chr5 (357-423)||(36509507-36509573)
chr5 (230-327)||(25250468-25250565)
chr5 (230-327)||(25314253-25314350)
chr5 (360-439)||(20565873-20565952)
chr5 (300-423)||(21406324-21406447)
chr5 (290-421)||(22357587-22357718)
chr5 (35-106)||(30616449-30616520)
chr5 (238-319)||(10953368-10953448)
chr5 (265-320)||(25576696-25576751)
chr5 (290-327)||(8952681-8952718)
chr5 (244-312)||(25574290-25574357)
chr5 (244-312)||(25575483-25575550)
[»] scaffold0251 (2 HSPs)
scaffold0251 (227-426)||(20591-20790)
scaffold0251 (5-154)||(20202-20348)
[»] scaffold0056 (2 HSPs)
scaffold0056 (3-219)||(66841-67057)
scaffold0056 (227-439)||(66284-66496)
[»] scaffold0028 (2 HSPs)
scaffold0028 (237-439)||(3665-3867)
scaffold0028 (1-107)||(3164-3269)
[»] chr1 (28 HSPs)
chr1 (3-219)||(13302625-13302841)
chr1 (227-439)||(13302060-13302272)
chr1 (14-218)||(45755244-45755447)
chr1 (1-109)||(7320706-7320814)
chr1 (14-201)||(24727124-24727309)
chr1 (34-219)||(42697506-42697690)
chr1 (35-106)||(51336334-51336405)
chr1 (360-423)||(14238306-14238369)
chr1 (360-423)||(51082511-51082574)
chr1 (357-423)||(38887818-38887884)
chr1 (360-423)||(7052749-7052812)
chr1 (35-106)||(12327889-12327960)
chr1 (230-322)||(45754850-45754941)
chr1 (253-327)||(42697105-42697179)
chr1 (360-425)||(21239949-21240014)
chr1 (370-439)||(51323594-51323663)
chr1 (349-412)||(7321491-7321554)
chr1 (290-421)||(52983437-52983568)
chr1 (290-327)||(13528419-13528456)
chr1 (342-419)||(51476270-51476347)
chr1 (370-409)||(4596509-4596548)
chr1 (237-322)||(12328432-12328517)
chr1 (247-313)||(22124517-22124583)
chr1 (1-37)||(8276102-8276139)
chr1 (1-37)||(38056785-38056822)
chr1 (32-97)||(51476836-51476901)
chr1 (290-322)||(18823997-18824029)
chr1 (237-332)||(51327010-51327105)
[»] scaffold0010 (2 HSPs)
scaffold0010 (14-219)||(126429-126633)
scaffold0010 (265-327)||(127022-127084)
[»] chr4 (30 HSPs)
chr4 (14-219)||(32466321-32466525)
chr4 (342-425)||(14629969-14630052)
chr4 (19-219)||(15612815-15613013)
chr4 (342-439)||(16026770-16026867)
chr4 (344-439)||(9638090-9638185)
chr4 (14-198)||(21062385-21062567)
chr4 (36-219)||(51993284-51993466)
chr4 (370-439)||(53631137-53631206)
chr4 (369-439)||(16026619-16026689)
chr4 (360-423)||(3485206-3485269)
chr4 (230-322)||(21061917-21062009)
chr4 (34-106)||(35811520-35811592)
chr4 (360-417)||(19734587-19734644)
chr4 (14-90)||(21046-21122)
chr4 (227-362)||(50160346-50160480)
chr4 (370-439)||(13036441-13036510)
chr4 (244-362)||(26050295-26050413)
chr4 (370-439)||(14630145-14630214)
chr4 (290-327)||(14933070-14933107)
chr4 (290-327)||(14942275-14942312)
chr4 (360-421)||(33243950-33244011)
chr4 (156-219)||(20936-21000)
chr4 (21-97)||(9870578-9870654)
chr4 (230-322)||(51992914-51993004)
chr4 (290-327)||(4615695-4615732)
chr4 (1-37)||(9638912-9638949)
chr4 (290-327)||(20899389-20899426)
chr4 (32-97)||(22354522-22354587)
chr4 (361-409)||(19609673-19609721)
chr4 (292-320)||(27028128-27028156)
[»] scaffold0175 (2 HSPs)
scaffold0175 (1-152)||(8430-8581)
scaffold0175 (285-404)||(18142-18262)
[»] scaffold0671 (1 HSPs)
scaffold0671 (14-201)||(4682-4867)
[»] scaffold1186 (2 HSPs)
scaffold1186 (342-425)||(854-937)
scaffold1186 (370-439)||(1030-1099)
[»] scaffold0005 (2 HSPs)
scaffold0005 (342-425)||(187331-187414)
scaffold0005 (370-439)||(187169-187238)
[»] scaffold0042 (3 HSPs)
scaffold0042 (14-219)||(29112-29314)
scaffold0042 (237-327)||(28662-28751)
scaffold0042 (290-336)||(47195-47241)
[»] scaffold0409 (2 HSPs)
scaffold0409 (237-421)||(519-702)
scaffold0409 (237-421)||(8774-8957)
[»] scaffold0241 (4 HSPs)
scaffold0241 (319-439)||(1664-1784)
scaffold0241 (342-426)||(4830-4914)
scaffold0241 (369-439)||(5007-5077)
scaffold0241 (369-439)||(1854-1924)
[»] scaffold0077 (3 HSPs)
scaffold0077 (14-201)||(5690-5876)
scaffold0077 (360-423)||(33645-33708)
scaffold0077 (237-322)||(3105-3189)
[»] scaffold0589 (2 HSPs)
scaffold0589 (34-201)||(4126-4291)
scaffold0589 (230-283)||(3701-3754)
[»] scaffold0002 (2 HSPs)
scaffold0002 (231-421)||(127365-127555)
scaffold0002 (34-201)||(398303-398468)
[»] scaffold0529 (3 HSPs)
scaffold0529 (342-439)||(7616-7713)
scaffold0529 (376-439)||(7807-7870)
scaffold0529 (23-106)||(4002-4085)
[»] scaffold0859 (2 HSPs)
scaffold0859 (227-439)||(3954-4166)
scaffold0859 (1-183)||(4440-4622)
[»] scaffold0371 (2 HSPs)
scaffold0371 (342-425)||(16891-16974)
scaffold0371 (290-332)||(3243-3285)
[»] scaffold0220 (2 HSPs)
scaffold0220 (14-197)||(19695-19881)
scaffold0220 (1-38)||(13850-13888)
[»] scaffold0003 (2 HSPs)
scaffold0003 (25-106)||(96233-96314)
scaffold0003 (227-322)||(95676-95771)
[»] scaffold0285 (1 HSPs)
scaffold0285 (259-421)||(19004-19166)
[»] scaffold1283 (1 HSPs)
scaffold1283 (370-439)||(1131-1200)
[»] scaffold0065 (2 HSPs)
scaffold0065 (17-106)||(52673-52762)
scaffold0065 (32-174)||(55710-55850)
[»] scaffold0061 (2 HSPs)
scaffold0061 (370-439)||(15250-15319)
scaffold0061 (370-439)||(24308-24377)
[»] scaffold0520 (1 HSPs)
scaffold0520 (290-426)||(89-225)
[»] scaffold0445 (1 HSPs)
scaffold0445 (227-421)||(2498-2693)
[»] scaffold0151 (2 HSPs)
scaffold0151 (227-321)||(30409-30503)
scaffold0151 (80-219)||(30832-30970)
[»] scaffold0439 (2 HSPs)
scaffold0439 (370-439)||(3738-3807)
scaffold0439 (357-423)||(11455-11521)
[»] scaffold0338 (2 HSPs)
scaffold0338 (230-375)||(11395-11540)
scaffold0338 (23-106)||(10895-10978)
[»] scaffold0207 (1 HSPs)
scaffold0207 (360-423)||(15203-15266)
[»] scaffold0146 (1 HSPs)
scaffold0146 (360-423)||(22353-22416)
[»] scaffold0019 (1 HSPs)
scaffold0019 (360-423)||(29453-29516)
[»] scaffold1633 (1 HSPs)
scaffold1633 (370-423)||(503-556)
[»] scaffold0292 (1 HSPs)
scaffold0292 (370-423)||(6848-6901)
[»] scaffold0205 (1 HSPs)
scaffold0205 (370-423)||(29905-29958)
[»] scaffold0039 (1 HSPs)
scaffold0039 (376-429)||(10639-10692)
[»] scaffold0018 (1 HSPs)
scaffold0018 (370-423)||(20987-21040)
[»] scaffold0113 (2 HSPs)
scaffold0113 (370-426)||(34561-34617)
scaffold0113 (131-174)||(32690-32730)
[»] scaffold0546 (2 HSPs)
scaffold0546 (360-423)||(11090-11153)
scaffold0546 (360-423)||(7270-7333)
[»] scaffold0109 (2 HSPs)
scaffold0109 (360-423)||(671-734)
scaffold0109 (360-423)||(5974-6037)
[»] scaffold0026 (1 HSPs)
scaffold0026 (360-423)||(146028-146091)
[»] scaffold0716 (2 HSPs)
scaffold0716 (290-375)||(1217-1302)
scaffold0716 (33-201)||(1805-1971)
[»] scaffold0575 (1 HSPs)
scaffold0575 (370-419)||(5990-6039)
[»] scaffold0232 (1 HSPs)
scaffold0232 (370-419)||(3609-3658)
[»] scaffold0096 (1 HSPs)
scaffold0096 (370-423)||(21403-21456)
[»] scaffold0047 (1 HSPs)
scaffold0047 (370-423)||(78357-78410)
[»] scaffold0075 (2 HSPs)
scaffold0075 (14-90)||(60745-60821)
scaffold0075 (156-219)||(60635-60699)
[»] scaffold0021 (1 HSPs)
scaffold0021 (370-426)||(168769-168825)
[»] scaffold0331 (2 HSPs)
scaffold0331 (246-364)||(12721-12838)
scaffold0331 (290-327)||(4086-4123)
[»] scaffold0071 (2 HSPs)
scaffold0071 (35-97)||(15117-15179)
scaffold0071 (244-313)||(14538-14608)
[»] scaffold0321 (1 HSPs)
scaffold0321 (230-319)||(572-660)
[»] scaffold0017 (1 HSPs)
scaffold0017 (370-439)||(25835-25904)
[»] scaffold0453 (1 HSPs)
scaffold0453 (290-421)||(3327-3458)
[»] scaffold1276 (1 HSPs)
scaffold1276 (349-406)||(388-445)
[»] scaffold0452 (1 HSPs)
scaffold0452 (370-423)||(13329-13382)
[»] scaffold0293 (1 HSPs)
scaffold0293 (247-320)||(17727-17800)
[»] scaffold0273 (2 HSPs)
scaffold0273 (290-327)||(7006-7043)
scaffold0273 (370-421)||(6912-6963)
[»] scaffold0117 (1 HSPs)
scaffold0117 (290-327)||(40854-40891)
[»] scaffold0098 (1 HSPs)
scaffold0098 (370-439)||(39418-39487)
[»] scaffold0034 (2 HSPs)
scaffold0034 (370-423)||(120245-120298)
scaffold0034 (84-174)||(34122-34209)
[»] scaffold0490 (1 HSPs)
scaffold0490 (291-327)||(5210-5246)
[»] scaffold0356 (1 HSPs)
scaffold0356 (265-320)||(502-557)
[»] scaffold0107 (1 HSPs)
scaffold0107 (290-421)||(3170-3301)
[»] scaffold0083 (2 HSPs)
scaffold0083 (370-421)||(646-696)
scaffold0083 (370-421)||(5950-6000)
[»] scaffold0009 (1 HSPs)
scaffold0009 (265-320)||(85770-85825)
[»] scaffold0413 (1 HSPs)
scaffold0413 (289-327)||(11062-11100)
[»] scaffold0379 (1 HSPs)
scaffold0379 (244-322)||(14432-14510)
[»] scaffold0377 (1 HSPs)
scaffold0377 (290-332)||(16743-16785)
[»] scaffold0149 (1 HSPs)
scaffold0149 (290-332)||(36183-36225)
[»] scaffold0429 (1 HSPs)
scaffold0429 (290-327)||(2619-2656)
[»] scaffold0309 (2 HSPs)
scaffold0309 (290-327)||(6292-6329)
scaffold0309 (290-327)||(8444-8481)
[»] scaffold0123 (1 HSPs)
scaffold0123 (290-327)||(1905-1942)
[»] scaffold0737 (1 HSPs)
scaffold0737 (21-89)||(5951-6019)
[»] scaffold0112 (1 HSPs)
scaffold0112 (349-412)||(2132-2193)


Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 20022145 - 20022364
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20022145 gtaattggttgatttaagagtggaaatctgatgaattgatgtagaattagtgtctagaccttaggttattcatagaacaatgattagaatcaattttaag 20022244  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20022245 gttagagttatggaattaggtgagttttgttgaaaactgcattctggccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 20022344  T
Q  201 g-gtgatcatcttcatcgct 219  Q
    | ||||||||||||||||||    
T  20022345 gagtgatcatcttcatcgct 20022364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 227 - 439
Target Start/End: Original strand, 45471025 - 45471237
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  45471025 agttactcagtggcagtcaaccttgtttagttttcttgcgatctttttcggacgtgacgttccgagttggtccttgggataggaatgaaagttgttcata 45471124  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45471125 attatattgttgtgtagtgagtctgaattaatataaatattgatgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattg 45471224  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  45471225 ttgttcatatcat 45471237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 31722606 - 31722824
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| || |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  31722606 gtaattggttgatttaagagtagaaatctgttgaattgatgtagaattaatgtccagaccttaggttatccatagaacaatgattagaatcagttttaag 31722705  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  31722706 gttagagtcatggaatt-ggtgagttttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaacagttctcgcctcac 31722804  T
Q  201 -ggtgatcatcttcatcgct 219  Q
      ||||||||||||||||||    
T  31722805 aagtgatcatcttcatcgct 31722824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 237 - 439
Target Start/End: Original strand, 20024860 - 20025061
Alignment:
Q  237 tggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgt 336  Q
    ||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20024860 tggcagtcaaccttgtttagtgttcttgcaatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatatttt 20024959  T
Q  337 tgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatct 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||| ||| |    
T  20024960 tgtgtagtgagtctgaattaatatgaatattgatgttggataatttgagatacatatattatgtgaatattgtatg-tatagaaatattgttgttcatat 20025058  T
Q  437 cat 439  Q
    |||    
T  20025059 cat 20025061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 36727164 - 36727369
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36727164 ttaagagtaggaatctgttgaattgatgtagaaatagtgtccagaccttagattattcatagaacaatgattagaatcagttttaaggttagagttatgg 36727263  T
Q  114 aattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatctt 212  Q
    |||||||||||| ||  |||||||||||||||| ||||||| || |||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  36727264 aattaggtgagtttttgtgaaaactgcattctgtccgtagagcttacattcatcgctcgccatagcgagtagctgttctcgcctcgcgagttatcatctt 36727363  T
Q  213 catcgc 218  Q
    ||||||    
T  36727364 catcgc 36727369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 45469332 - 45469474
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45469332 gtaattggttgatttaagagtagaaatttgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 45469431  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcatt 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  45469432 gttagagttatggaattaggtgagtcttgttgaaaactgcatt 45469474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 23900113 - 23900319
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||| | ||||||||||||||||| | ||||    
T  23900113 ttaagagtaggaatctgttgaattgatgtagaaatagtgtccagaccttagattattcatagagcaatgattacagtcagttttaaggttagaatcatgg 23900212  T
Q  114 aattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc-ggtgatcatctt 212  Q
    |||||||||||| ||  ||||||||||||| |||||||| | ||||||||||||||||||||||||||||| ||  |||||||||||  |||||||||||    
T  23900213 aattaggtgagtttttgtgaaaactgcattatgcccgtaaagctgacattcatcgctcgccatagcgagtagcttctctcgcctcgcaagtgatcatctt 23900312  T
Q  213 catcgct 219  Q
    |||||||    
T  23900313 catcgct 23900319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 227 - 439
Target Start/End: Original strand, 22318522 - 22318734
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||| |||| |||||| ||||| |||||||| ||||||||||||||| ||||||||  |||||||||||||| |||||| | |||    
T  22318522 agttactcagtggcagtcagccttatttagtgttcttgcgatctttgtcgcacgtgacgttctgagttggtttttggggtaggaatgaaagttgcttata 22318621  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||| ||||||  |  ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  22318622 attgtattgtctttcagtgagtctgaattaatatgaatattgttgttggataatttgagatacatatattacgtggatattgtatgatatagaaatattg 22318721  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  22318722 ttgttcatatcat 22318734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 227 - 439
Target Start/End: Original strand, 31723176 - 31723388
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| |||||| |  ||||  ||||| ||||| |||||||| |||||||||| |||| ||||||||| ||||||||||||| ||||||||| |||    
T  31723176 agttactcagtggcagacggccttacttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaattgaagttgtttata 31723275  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    | | ||| ||  |  ||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31723276 aatgtatagtatttcagtgagtctgaattaatatgaatattgttgttaaataatttgagatacatatattatgtgaatattgtatgatatagaaatattg 31723375  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  31723376 ttgttcatatcat 31723388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 226 - 421
Target Start/End: Complemental strand, 22244889 - 22244695
Alignment:
Q  226 aagttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcat 325  Q
    |||||||||| ||||||||||||||||||||  ||||| |||||||| |||||||||| |||| ||||||||| |||||||||||||| |||||||| ||    
T  22244889 aagttactcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatgaaagttgtttat 22244790  T
Q  326 aattatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
    ||||||||||| ||  |||||||||||||||| |||| || || |||||| ||| ||||| ||||||||||||||  | | |||||||||||||||    
T  22244789 aattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttaagctacatatattatgttgaaaatgtatgatatagaaa 22244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 17906974 - 17907182
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||| | |||||| ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||   ||||    
T  17906974 ttaagagtgggaatctgttgaattgatgtagaaatagtgtccagaccttagattatccatagaacaatgattagaatcagttttaaggttagaagcatgg 17907073  T
Q  114 ----aattaggtgag-tcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatc 207  Q
        ||||||||||| | ||| ||||||||| |||||||||   || |||||||||||||| |||||||||||||| ||  |||| ||||||| |||||     
T  17907074 aattaattaggtgagtttttggtgaaaactgtattctgccc---gagctgacattcatcgcccgccatagcgagtagcttctctctcctcgcgcgtgatg 17907170  T
Q  208 atcttcatcgct 219  Q
    ||||||||||||    
T  17907171 atcttcatcgct 17907182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 22254700 - 22254498
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| || ||| |||| |||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||  |   ||||    
T  22254700 ttaagagtaggaacctgttgaactgatgtagaaatagtgtccagaccttagactattcatagaacaatgattagaatcagttttaaggtt--aaccatgg 22254603  T
Q  114 aattaggtgag-tcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatct 211  Q
    |||| |||||| | |||   |||||||||||||||||   || ||||||||||||||||||| ||||||||| |||| ||||||||||| ||||| | ||    
T  22254602 aattgggtgagtttttgagaaaaactgcattctgccc---gagctgacattcatcgctcgccttagcgagtagctgtcctcgcctcgcgagtgatgaact 22254506  T
Q  212 tcatcgct 219  Q
    ||||||||    
T  22254505 tcatcgct 22254498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 402
Target Start/End: Original strand, 36727721 - 36727896
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| || |||||| ||||  ||||| ||||| |||||||| |||||||||| |||  ||||| ||| ||||||||||||||||||||||| |||    
T  36727721 agttactcagtgacagtcagccttacttagtgttcttgcgatctttgtcgcacgtgatgttatgagtttgtctttggggtaggaatggaagttgtttata 36727820  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtga 402  Q
    | | ||| ||  |  ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||    
T  36727821 aatgtatagtctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtga 36727896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 319 - 439
Target Start/End: Original strand, 36727984 - 36728104
Alignment:
Q  319 tgttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatag 418  Q
    |||| |||||| ||||||  | |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  36727984 tgtttataattgtattgtcttttagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatag 36728083  T
Q  419 aaatattgatgtccatctcat 439  Q
    |||||||| ||| ||| ||||    
T  36728084 aaatattgttgttcatatcat 36728104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 17218627 - 17218442
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| || ||| |||||||||| |||||||||||| |||||||||  |||||| ||||||||||||||||| ||||||||| |||||   ||||    
T  17218627 ttaagagtaggaacctgttgaattgatgcagaaatagtgtccagaccttagactattcacagaacaatgattagaattagttttaagattagaaccatgg 17218528  T
Q  114 aattaggtgagtcttgttg-aaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    ||||  |||||| ||   | |||||||||||||||||   || ||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  17218527 aattgagtgagtttttaagaaaaactgcattctgccc---gagctgacattcatcgcttgccatagcgagtagctgatctcgcctcgcg 17218442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 421
Target Start/End: Complemental strand, 23947680 - 23947492
Alignment:
Q  231 actcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataatta 330  Q
    ||||| ||||||||||||||||||||  |||||  ||||||| |||||||||| | || ||||||||| |||||||||||||| |||||||| |||||||    
T  23947680 actcagtggcagtcaaccttgtttagggttcttgggatctttgtcgcacgtgatgctcagagttggtctttggggtaggaatgaaagttgtttataatta 23947581  T
Q  331 tattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
    |||||| ||  |||||||||||||||| |||| || || | |||| ||| || || ||||||||||||||| | | |||||||||||||||    
T  23947580 tattgtggttcagtgagtctgaattaaaatgattaatgtttttggttaa-ttgagctacatatattatgtgga-aatgtatgatatagaaa 23947492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 23948189 - 23948031
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| || ||| ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||  ||||||||||||||   ||||    
T  23948189 ttaagagtaggaacctgttgaattgatgtagaaatagtgtccagaccttagactattcatagaacaatgattagaatatgttttaaggttagaaccatgg 23948090  T
Q  114 aattaggtg-agtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgcc 174  Q
    ||||||||| | | |||   |||||||||||||||||   || |||||||||||||||||||    
T  23948089 aattaggtgaatttttgagaaaaactgcattctgccc---gagctgacattcatcgctcgcc 23948031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 23419368 - 23419183
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||||||  || | ||||||||||||| | ||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||   || |    
T  23419368 ttaagagtagaaacatgttaaattgatgtagaatttgtgtccagaccttagactattcatagaacaatgattagaatcagttttaaggttagaaccattg 23419269  T
Q  114 aattaggtgagtcttgttgaaaactgc-attctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    |||| | ||||  |||   |||  ||| |||||||||   || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  23419268 aattggatgagctttgagaaaatatgcaattctgccc---gagctgacattcatcgctcgccatagcgagtaactgatctcgcctcgcg 23419183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 45470591 - 45470673
Alignment:
Q  138 tgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatcttcatcgct 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  45470591 tgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcaactcgcgagtgatcatcttcatcgct 45470673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 34 - 219
Target Start/End: Complemental strand, 19700067 - 19699883
Alignment:
Q  34 aattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatggaattaggtgagtcttgttga 133  Q
    ||||||||||||| ||||| | |||||||||  ||||||||||||||||||||||||||||||||||||||||   ||| |||| | ||||| ||   ||    
T  19700067 aattgatgtagaattagtgaccagaccttagaatattcatagaacaatgattagaatcagttttaaggttagaaccatgaaattggatgagtttttgaga 19699968  T
Q  134 aaa-ctgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatcttcatcgct 219  Q
    |||  ||||||||||||   || ||||||||||||| ||||||||||||||| ||||  |||||||||| ||||| | ||||||||||    
T  19699967 aaatttgcattctgccc---gagctgacattcatcgttcgccatagcgagtagctgtcttcgcctcgcgagtgatgaacttcatcgct 19699883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 342 - 439
Target Start/End: Original strand, 31723481 - 31723578
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| ||| ||||    
T  31723481 agtgagtatgaattaatatgaatattgttgttgaataatttgagatacatatattatctgaatattgtatgatatagaaatattgttgttcatatcat 31723578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 5760921 - 5760852
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  5760921 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 5760852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 230 - 382
Target Start/End: Complemental strand, 9642 - 9491
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataatt 329  Q
    |||||| ||||||||||||||||||||  ||||| ||||||| | ||||| ||| |||| ||||| ||| || ||||||||||| |||||||| |||| |    
T  9642 tactcagtggcagtcaaccttgtttagggttcttgcgatcttgt-cgcacatgatgttctgagttagtcgttagggtaggaatgaaagttgtttataact 9544  T
Q  330 atattgttgtgtagtgagtctgaattaatatgaatattgatgttggataattt 382  Q
    ||||||| ||  ||||||||||||| | |||| ||| || ||||| |||||||    
T  9543 atattgtagttcagtgagtctgaatcagtatggataatgttgttgaataattt 9491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 22318023 - 22318197
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    ||||||||||| ||||| ||||||| | |  |||||||||||||||| || ||  | ||||||| |||||||||| | |||||||||||||||||||| |    
T  22318023 gtaattggttggtttaatagtagaatttttttgaattgatgtagaaacagagttcaaaccttagattattcatagtaaaatgattagaatcagttttagg 22318122  T
Q  101 gttagagttatggaattaggtgag-tcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgcca 175  Q
    ||||||| |||| |||| || ||| | ||| ||||| |||  ||||||||||||||| ||   |||||||||||||    
T  22318123 gttagagatatgaaatttgg-gagattttgctgaaatctgtgttctgcccgtagaacagatcgtcatcgctcgcca 22318197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 18761356 - 18761284
Alignment:
Q  34 aattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||| | |||||||||||||| ||||||||    
T  18761356 aattgatgtagaaatagtgtccagaccttagactattcatagaacaaagtttagaatcagttttgaggttaga 18761284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 21346063 - 21346116
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21346063 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 21346116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 376 - 423
Target Start/End: Original strand, 6102462 - 6102509
Alignment:
Q  376 ataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6102462 ataatttgagatacatatattatgtgaatattgtatgatatagaaata 6102509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 23914312 - 23914259
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  23914312 tgttgaataatttgagatacatatattatgtgaatgttgtatgatatagaaata 23914259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 17218073 - 17217978
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    ||||||||| ||||||||  ||||  ||||  ||||| |||||||| |||||||||| |||  ||||||||| || ||||||||||||||||||||    
T  17218073 agttactcagtggcagtcggccttacttagggttctttcgatctttatcgcacgtgatgttatgagttggtctttcgggtaggaatggaagttgtt 17217978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 227 - 421
Target Start/End: Original strand, 17907535 - 17907729
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||| ||||  ||||  ||||| |||||||| || ||| ||| |||  ||||||||| ||||||||| ||||||||||||| |||    
T  17907535 agttactcagtggcagtcagccttagttagagttcttgcgatctttgtcacacctgatgttatgagttggtctttggggtagaaatggaagttgtttata 17907634  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
    |   ||| |   |  ||||| ||| |||||| |||| || || |||||| |||| | | |||||||||||||||| | |  ||||||||||||||    
T  17907635 aaggtatagcctttcagtgaatctaaattaaaatgattaatgttgttggttaatgtgaaatacatatattatgtggaaaaagtatgatatagaaa 17907729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 20084328 - 20084394
Alignment:
Q  357 atatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    |||||||| ||  ||||| ||||||| || ||||||||||||||||||||||||||||||| |||||    
T  20084328 atatgaatgttcttgttgaataatttgaggtacatatattatgtgaatattgtatgatataaaaata 20084394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 13661021 - 13661090
Alignment:
Q  56 agaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatggaattaggtgagt 125  Q
    ||||||||| | ||||||| |||||| ||||||||||||||||||||||||   |||||||||| |||||    
T  13661021 agaccttagataattcatataacaattattagaatcagttttaaggttagaaccatggaattagatgagt 13661090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 13719664 - 13719733
Alignment:
Q  56 agaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatggaattaggtgagt 125  Q
    ||||||||| | ||||||| |||||| ||||||||||||||||||||||||   |||||||||| |||||    
T  13719664 agaccttagataattcatataacaattattagaatcagttttaaggttagaaccatggaattagatgagt 13719733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 19699542 - 19699458
Alignment:
Q  237 tggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    ||||||||||||||||||||  ||||| |||||||| |||||||||| |||  |||||| | ||| || |||||||||||||||||    
T  19699542 tggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttgtgagttgat-cttaggataggaatggaagttgtt 19699458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 23450879 - 23450837
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattata 332  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  23450879 gagttggtccttggggtaggaatggaagttgttaatgattata 23450837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 34301957 - 34301915
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattata 332  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  34301957 gagttggtccttggggtaggaatggaagttgttaatgattata 34301915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 37516517 - 37516368
Alignment:
Q  32 tgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatggaattaggtgagtcttgtt 131  Q
    ||||||||||||||||| ||||  ||||||||| | || ||||| |  || |||  |||||||||||||||||||   |||  ||| | ||| ||| |      
T  37516517 tgaattgatgtagaaattgtgtacagaccttagataatccataggatgataattgaaatcagttttaaggttagaaacatgagattggatgattctagga 37516418  T
Q  132 gaaaa-ctgcattctgcccgtagaactgacattcatcgctcgccatagcgagt 183  Q
    ||||| ||||||||||||||   | ||||||||||||||||||||||||||||    
T  37516417 gaaaatctgcattctgcccg---agctgacattcatcgctcgccatagcgagt 37516368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 23900670 - 23900726
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtga 283  Q
    ||||||||| ||||||||||||||  ||||| ||||| |||||||| ||||||||||    
T  23900670 agttactcagtggcagtcaaccttacttagtgttcttgcgatctttgtcgcacgtga 23900726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 14103065 - 14103120
Alignment:
Q  265 cgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttg 320  Q
    |||||||| ||||||| || ||| ||||||| ||||||||||||||||||| ||||    
T  14103065 cgatctttgtcgcacgagatgttacgagttgatccttggggtaggaatggaggttg 14103120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 19928900 - 19928974
Alignment:
Q  32 tgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    ||||||||||||||||  ||||  ||||||||| | || |||||||  || ||| ||||||||||||||||||||    
T  19928900 tgaattgatgtagaaactgtgtacagaccttagataatccatagaatgataattggaatcagttttaaggttaga 19928974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 420
Target Start/End: Complemental strand, 23889095 - 23889017
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaa 420  Q
    ||||| ||| || |||||||| || || |||||| |||||| || ||||||||||||||| | | ||||||||||||||    
T  23889095 agtgaatctaaactaatatgattaatgttgttggttaatttgagctacatatattatgtggaaaatgtatgatatagaa 23889017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 22253000 - 22253061
Alignment:
Q  259 ttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttg 320  Q
    ||||| |||||||| |||||||||| |||  ||||||  |||||||||||||||||| ||||    
T  22253000 ttcttgcgatctttgtcgcacgtgatgttatgagttgacccttggggtaggaatggaggttg 22253061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 24495986 - 24495949
Alignment:
Q  295 ggtccttggggtaggaatggaagttgttcataattata 332  Q
    |||||||||||||||||||||||||||| || ||||||    
T  24495986 ggtccttggggtaggaatggaagttgttaatgattata 24495949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 22963240 - 22963315
Alignment:
Q  244 caaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttg 320  Q
    |||||||||||||  || || |||||||| ||||||| || |||  ||||||  |||||||||||||||||||||||    
T  22963240 caaccttgtttaggatt-ttgcgatctttgtcgcacgagatgttatgagttgacccttggggtaggaatggaagttg 22963315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 184; Significance: 2e-99; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 48807438 - 48807649
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  48807438 gtaattggttgatttaagagtagaaatctgttgaattgatgtagaaatagtatccagaccttaggttattcatagaacaatgattagaatcagttttaag 48807537  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48807538 gttagagttatggaattaggtgagttttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgtcctcgcctcgc 48807637  T
Q  201 g-gtgatcatct 211  Q
    | ||||||||||    
T  48807638 gagtgatcatct 48807649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 227 - 439
Target Start/End: Original strand, 13132934 - 13133146
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| |||||||||||||| |||||| ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  13132934 agttactcagtggcagtcaaccttttttagtgttcttgcgatctttttcgcacgtgacgttctgagttgatccttggggtaggaatggaagttgttcata 13133033  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  13133034 attatattgttgtgtagtgagtctgaattaatatgaatatcgttgttgaataatttgagatacatatattatgtgaatattgtatggtatataaatattg 13133133  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  13133134 ttgttcatatcat 13133146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 16078269 - 16078072
Alignment:
Q  3 aattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggt 102  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  16078269 aattggttgatttaagagtagaaatctgttgaattgatgcagaaatagtgttcagaccttaggttattcatagaacaatgattagaatcagttttaaggt 16078170  T
Q  103 tagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    |||  |||||||||||||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  16078169 taggattatggaattaggtgagttttgttg-aaattgcattctgcccgtagaactaacattcatcgctcgccatagcgagtatatgttctcgcctcgcg 16078072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 227 - 439
Target Start/End: Original strand, 48809097 - 48809308
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||| ||||||||||||||||| ||||| ||||||||| ||||||||| |||| ||||||||| ||||||||||||| |||||||||||||    
T  48809097 agttactcagtggtagtcaaccttgtttagtgttcttgcgatctttt-cgcacgtgatgttctgagttggtcattggggtaggaatagaagttgttcata 48809195  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  48809196 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttgggtaatttgagacacatatatgatgtgaatattgtatgatatagaaatattg 48809295  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  48809296 ttgttcatatcat 48809308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 14219011 - 14219224
Alignment:
Q  3 aattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggt 102  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  14219011 aattgattaatttaagagtagaaatctgttgaattgatgtagaaatagtgtccagaccttagattattcatagaacaatgattagaatcagttttaaggt 14219110  T
Q  103 tagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc-g 201  Q
    ||||||||||||||||||||| | ||   ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| | |    
T  14219111 tagagttatggaattaggtgaatttttgggaaaacttcattctgcccgtagagctgacattcatcgctcgccatagcgagtaactgctctcacctcacgg 14219210  T
Q  202 gtgatcatcttcat 215  Q
    ||||| ||||||||    
T  14219211 gtgataatcttcat 14219224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 13132433 - 13132633
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||| |||||| | ||| ||| |||||||| ||||||||||||||||||||||||||    
T  13132433 gtaatcggttgatttaagagtagaaatctgttgaattgatgtagaaacagtgtccataccgtagattattcattgaacaatgattagaatcagttttaag 13132532  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    ||||||||| | ||||||||||||| ||  |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  13132533 gttagagttgtagaattaggtgagtttttgtgaaaactgcattctgcccgtagagctgacattcgtcgctcgccatagcgagtaactgttctcgcctcgc 13132632  T
Q  201 g 201  Q
    |    
T  13132633 g 13132633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 4071746 - 4071542
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| ||||||||||||| | ||||    
T  4071746 ttaagagtaggaatctgttgaattgatgtagaaatagtgtccagaccttagattattcatagaacaatgattggaatcaattttaaggttagaatcatgg 4071647  T
Q  114 aattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatctt 212  Q
    |||||||||||| ||    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  4071646 aattaggtgagtttttgaaaaaactgcactctgcccgtagagctgacattcatcgctcgccatagcgagtagctgtcctcgcctcgcgagtgatcatctt 4071547  T
Q  213 catcg 217  Q
    |||||    
T  4071546 catcg 4071542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 227 - 439
Target Start/End: Original strand, 15096252 - 15096464
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| |||||||||||||| |||| | ||||| |||||||| |||||||||||||||  ||||||||||||||||||||||| |||||||| |||    
T  15096252 agttactcagtggcagtcaaccttatttaatgttcttgcgatctttgtcgcacgtgacgttcttagttggtccttggggtaggaatgaaagttgtttata 15096351  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||| ||||||  |  ||||||| ||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15096352 attgtattgtctttcagtgagtttgaattaatatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattg 15096451  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  15096452 ttgttcatatcat 15096464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 227 - 439
Target Start/End: Complemental strand, 16077806 - 16077594
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||||||  ||| |||||||||| |||||||| |||    
T  16077806 agttactcagtggcagtcaaccttgtttagtgttcttgagatctttttcgcacgtgacgttctgagttggtatttgtggtaggaatgaaagttgtttata 16077707  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    || ||||||||||  ||||||| ||||||||||||||| ||| ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||    
T  16077706 atcatattgttgttcagtgagtttgaattaatatgaatgttgttgttggataatttgaaatacatgtattatgtgaatattgtatgatatagaaatattg 16077607  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  16077606 ttgttcatatcat 16077594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 227 - 424
Target Start/End: Original strand, 19557892 - 19558089
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||| | ||||||||  ||||| ||||||||||||||||| |||||| ||||||||| |||||||| ||||| |||||||| |||    
T  19557892 agttactcagtggcagtcagcattgtttagggttcttgcgatctttttcgcacgtaacgttctgagttggtctttggggtaagaatgaaagttgtttata 19557991  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatat 424  Q
    |||||||||||||   |||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19557992 attatattgttgttccgtgagtctaaattaatatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatat 19558089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 227 - 439
Target Start/End: Original strand, 14219580 - 14219792
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||||||||||||||  ||||| |||||| | || ||||| |||||| || |||||| |||||||||||||| |||||||| |||    
T  14219580 agttactcagtggcagtcaaccttgtttagggttcttgcgatctctgtcacacgtaacgttctgacttggtctttggggtaggaatgaaagttgtttata 14219679  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    | |||||||||||  ||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  14219680 aatatattgttgttcagtgagtctgaattaatatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaagtattg 14219779  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  14219780 ttgttcatatcat 14219792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 227 - 426
Target Start/End: Complemental strand, 15139608 - 15139408
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| |||||||||||||||||||||  |||| |||||||| ||||||||||||||| ||||||||  |||||||||||||| |||||||  |||    
T  15139608 agttactcagtggcagtcaaccttgtttagtgctcttgcgatctttgtcgcacgtgacgttctgagttggtttttggggtaggaatgaaagttgtctata 15139509  T
Q  327 attatattgttgtgtagtgagtctgaattaatatg-aatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    ||| ||||||  |  |||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  15139508 attgtattgtctttcagtgagtctgaattaatatgaaatattgttgttggataatttgagatacatatattatgtgaacattgtatgatatagaaatatt 15139409  T
Q  426 g 426  Q
    |    
T  15139408 g 15139408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 15289030 - 15288845
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| || ||| ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||   ||||    
T  15289030 ttaagagtaggaacctgttgaattgatgtagaaatagtgtccagaccttagaatattcatagaacaatgattagaatcagttttaaggttagaaccatgg 15288931  T
Q  114 aattaggtgag-tcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    |||| |||||| | |||   ||||||||||||||||    || |||||||||||||||| ||||||||||||| || ||||||||||||    
T  15288930 aattgggtgagtttttgagaaaaactgcattctgcc---tgagctgacattcatcgctcaccatagcgagtaattgatctcgcctcgcg 15288845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 15140153 - 15139968
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||| | |||  ||||||||| |||||| ||| ||||| |||||||||||||||| |    
T  15140153 gtaattggttgatttaatagtagaaatctgttgaactgatgtagaaacactgttcagaccttagattattcttagtacaataattagaatcagttttagg 15140054  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaac 186  Q
    ||||||||||||||||||||||||| ||| ||||| |||  || ||||| ||||   ||   ||||||||||||||||||||||||    
T  15140053 gttagagttatggaattaggtgagttttgctgaaatctgtgttatgcccatagagtagatcgtcatcgctcgccatagcgagtaac 15139968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 15095749 - 15095949
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||| |||||  ||||||| | |||||||||| |||||||||||||||||||||| |    
T  15095749 gtaattagttgatttaatagtagaaatctgttgaattgatgtagaaacagtgttcagacctttgattattcatagtacaatgattagaatcagttttagg 15095848  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    ||| | | ||||||||| || |||| ||| ||||| |||  ||||||||||||| | ||   |||||||||||||||||||||| |  | ||||||||||    
T  15095849 gtttgggatatggaattgggagagttttgctgaaacctgtgttctgcccgtagagcagatcgtcatcgctcgccatagcgagtatccttgctcgcctcgc 15095948  T
Q  201 g 201  Q
    |    
T  15095949 g 15095949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 3 - 219
Target Start/End: Original strand, 35771557 - 35771774
Alignment:
Q  3 aattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggt 102  Q
    ||||| || |||||||||||| ||| || |||||||| ||||||||||||||  |||||||  |||||||||||||||  ||||||||||||||||||||    
T  35771557 aattgattaatttaagagtaggaatatgttgaattgacgtagaaatagtgtcctgaccttaaattattcatagaacaaacattagaatcagttttaaggt 35771656  T
Q  103 tagagttatggaattaggt-gagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    ||||||||||||||||| | || | ||| | |||||||  ||||||||||||| | ||   |||||||||  ||||||||||||||  |||||||||| |    
T  35771657 tagagttatggaattagatggatttttgct-aaaactgtgttctgcccgtagagcagatcgtcatcgctcatcatagcgagtaactcctctcgcctcgtg 35771755  T
Q  202 -gtgatcatcttcatcgct 219  Q
     ||||| ||||||||||||    
T  35771756 agtgatgatcttcatcgct 35771774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 342 - 439
Target Start/End: Original strand, 13133239 - 13133336
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||||||||||||||||| || || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  13133239 agtgagtctgaattaatatgaatattgttgctgaataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 13133336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 201
Target Start/End: Original strand, 10658977 - 10659162
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    ||||||||||||| ||| | ||||||||||||| ||||||  |||||||||  |||||||||||||||||| | ||| |||||||||||| ||   ||||    
T  10658977 ttaagagtagaaacctgttaaattgatgtagaattagtgttcagaccttagactattcatagaacaatgatcataattagttttaaggtttgaaccatgg 10659076  T
Q  114 aattaggtgagtcttgttgaaaa-ctgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    |||| | ||||| ||   |||||  ||||||||||||   |||||||||||||||||||||||||||||||| ||   |||||||||||    
T  10659077 aattggatgagtttttgagaaaatatgcattctgccc---gaactgacattcatcgctcgccatagcgagtagctaccctcgcctcgcg 10659162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 8135349 - 8135549
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    ||||||||||||||||| |||  |||| || ||||||||||||||| ||||||  ||||| ||| ||||||||||   |||| ||| ||||||||||| |    
T  8135349 gtaattggttgatttaatagtgaaaatatgttgaattgatgtagaattagtgttcagaccctagattattcatagtgtaatgtttataatcagttttagg 8135448  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    ||| | | |||| |||| |||   | ||||||||| |||  ||||||||||||||| ||   |||||||||||||| ||||||||   ||||||||||||    
T  8135449 gtttgggatatgaaatttggtagtttttgttgaaatctgtgttctgcccgtagaacagatcctcatcgctcgccattgcgagtaatccttctcgcctcgc 8135548  T
Q  201 g 201  Q
    |    
T  8135549 g 8135549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 439
Target Start/End: Original strand, 22000832 - 22001042
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||||||||||||||| || || ||  |||| ||||||| |   ||| ||||||||  |||||||||||||| |||||| | |||    
T  22000832 agttactcagtggcagtcaaccttgtttagtgtttttgcgtcctttgtcgcacgag---ttcagagttggttattggggtaggaatgaaagttgcttata 22000928  T
Q  327 attatattgttgtgtagtgagtctg-aattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    ||| | |||   |  |||||||||| ||||| |||||||| || |||||||||||||   |||||||||||||||||||||| |||| | | ||||||||    
T  22000929 attgtgttgccttacagtgagtctgtaattattatgaatactgttgttggataatttggaatacatatattatgtgaatattatatgttgtggaaatatt 22001028  T
Q  426 gatgtccatctcat 439  Q
    | ||| ||| ||||    
T  22001029 gttgttcatatcat 22001042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 182
Target Start/End: Original strand, 36704697 - 36704863
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    ||||||||||||| ||| | ||||| ||||||| ||||||| |||||||||  | ||||||||||||||||||| ||||||||||||||||||   || |    
T  36704697 ttaagagtagaaacctgttaaattgttgtagaattagtgtccagaccttagacttttcatagaacaatgattaggatcagttttaaggttagaaccattg 36704796  T
Q  114 aattaggtgagtcttgttgaaaactgc-attctgcccgtagaactgacattcatcgctcgccatagcgag 182  Q
    |||| | ||||| |||   ||| |||| |||||||||   || |||||||||||||||||||| ||||||    
T  36704797 aattggatgagttttgagaaaatctgcaattctgccc---gagctgacattcatcgctcgccacagcgag 36704863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 401
Target Start/End: Original strand, 8135719 - 8135862
Alignment:
Q  258 tttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaa 357  Q
    |||||| || ||||| ||||| ||| ||||| ||||||| | |||||||||||||| |||||||  |||||| ||||||  |  ||||||| ||||||||    
T  8135719 tttcttgcgttctttgtcgcatgtgtcgttctgagttggactttggggtaggaatgaaagttgtatataattgtattgtcttacagtgagtatgaattaa 8135818  T
Q  358 tatgaatattgatgttggataatttaagatacatatattatgtg 401  Q
    ||||||||||| |||||||||| || | |||||  |||||||||    
T  8135819 tatgaatattgttgttggataaattgaaatacacctattatgtg 8135862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 1489935 - 1490004
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  1489935 tgttggataatttgatatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 1490004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 14929026 - 14929089
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14929026 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 14929089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 15352492 - 15352555
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15352492 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 15352555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 14258740 - 14258687
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14258740 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 14258687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 16460596 - 16460649
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16460596 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 16460649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 16580048 - 16579995
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16580048 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 16579995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 16585615 - 16585668
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16585615 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 16585668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 32301570 - 32301517
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32301570 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 32301517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 430
Target Start/End: Complemental strand, 4071210 - 4071008
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||  ||||||||| ||||  ||||  ||||| |||||||| |||||||| | |||  |||||| || |||||||  ||||| |||||||| |||    
T  4071210 agttactcggtggcagtcagccttacttagagttcttgcgatctttgtcgcacgtaatgttatgagttgatctttggggtgagaatgaaagttgtttata 4071111  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    |   ||| |   |  || ||||||||||||| |||| || || |||||| |||||| |||||||||||||||| | | ||||||||| ||||| ||||||    
T  4071110 aaggtatagcctttcagagagtctgaattaaaatgattaatgttgttggttaatttgagatacatatattatgaggaaattgtatga-atagagatattg 4071012  T
Q  427 atgt 430  Q
    ||||    
T  4071011 atgt 4071008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 421
Target Start/End: Complemental strand, 11054053 - 11053922
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatac 389  Q
    ||||||||| |||||||||||||| |||||||| ||||   ||| ||  |  ||||| ||| || |||||||| || || |||||| |||||| || |||    
T  11054053 gagttggtctttggggtaggaatgaaagttgtttataaaggtatagtcttccagtgaatctaaactaatatgactaatgttgttggttaatttgagctac 11053954  T
Q  390 atatattatgtgaatattgtatgatatagaaa 421  Q
    |||||||||||| | | |||||||||||||||    
T  11053953 atatattatgtggaaaatgtatgatatagaaa 11053922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 20487831 - 20487782
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatataga 419  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  20487831 tgttgaataatttgagatacatatattatgtgaatattgtaagatataga 20487782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 130637 - 130705
Alignment:
Q  246 accttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatgg 314  Q
    |||||||||||  ||||| |||||||| |||||||||| |||  |||||| ||||||||||||||||||    
T  130637 accttgtttagggttcttgcgatctttatcgcacgtgaggttttgagttgatccttggggtaggaatgg 130705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 15281744 - 15281652
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    |||||| ||||||||| ||||  |||| |||||| |||||||| |||||||||| |||   |||||||| ||||| || ||||||||||||||    
T  15281744 tactcagtggcagtcagccttacttagatttcttgcgatctttgtcgcacgtgatgttataagttggtctttgggataagaatggaagttgtt 15281652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 33001302 - 33001252
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
    ||||||||||||| |||||||||||||||||||| | |||||||||||||||    
T  33001302 tgttggataatttgagatacatatattatgtgaa-aatgtatgatatagaaa 33001252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 320
Target Start/End: Original strand, 36705238 - 36705327
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttg 320  Q
    |||||| ||||||||||||||||||||  ||||| |||||||| |||||||||| |||   |||| | | ||||||||| |||||||||||    
T  36705238 tactcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttgatagtt-gacattggggtagaaatggaagttg 36705327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 18074780 - 18074849
Alignment:
Q  34 aattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggtt 103  Q
    |||||||||||||||||| ||  ||||||||  ||||| |||||||| | ||||||| ||||||||||||    
T  18074780 aattgatgtagaaatagtatcctgaccttagactattcgtagaacaaagtttagaattagttttaaggtt 18074849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 11054632 - 11054556
Alignment:
Q  21 tagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    |||||| ||| |||||| ||| ||||| |||||  ||||||||| ||| |||||| ||||||||||||| |||||||    
T  11054632 tagaaacctgttgaattaatgaagaaacagtgttcagaccttagattactcatagtacaatgattagaaccagtttt 11054556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 362
Target Start/End: Complemental strand, 16996519 - 16996404
Alignment:
Q  247 ccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtga 346  Q
    ||||||||||  ||||| |||||||| |||||||||| |||  ||||||  |||| || |||||||||| |||| | |||||  ||||| |||  |||||    
T  16996519 ccttgtttagggttcttgcgatctttgtcgcacgtgaggttttgagttgacccttaggttaggaatggaggttgattataatattattgatgttcagtga 16996420  T
Q  347 gtctgaattaatatga 362  Q
    ||||||  ||||||||    
T  16996419 gtctgatataatatga 16996404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 409
Target Start/End: Original strand, 32434254 - 32434293
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgt 409  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  32434254 tgttggataatttgaaatacatatattatgtgaatattgt 32434293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 14036478 - 14036422
Alignment:
Q  265 cgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgt 321  Q
    |||||||| ||||||| || |||  |||||| ||||||||||||||||||| |||||    
T  14036478 cgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttgt 14036422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 14045028 - 14044972
Alignment:
Q  265 cgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgt 321  Q
    |||||||| ||||||| || |||  |||||| ||||||||||||||||||| |||||    
T  14045028 cgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttgt 14044972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 14346508 - 14346452
Alignment:
Q  265 cgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgt 321  Q
    |||||||| ||||||| || |||  |||||| ||||||||||||||||||| |||||    
T  14346508 cgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttgt 14346452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 14355058 - 14355002
Alignment:
Q  265 cgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgt 321  Q
    |||||||| ||||||| || |||  |||||| ||||||||||||||||||| |||||    
T  14355058 cgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttgt 14355002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 16092037 - 16091981
Alignment:
Q  265 cgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgt 321  Q
    |||||||| ||||||| || |||  |||||| ||||||||||||||||||| |||||    
T  16092037 cgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttgt 16091981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 172; Significance: 3e-92; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 3539776 - 3539557
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    ||||||||||||||||||||||||||| || |||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||     
T  3539776 gtaattggttgatttaagagtagaaatatgttgaattgatgtagagatagtgtccaaaccttaggttattcatagaacaatgattagaatcagttttaaa 3539677  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3539676 gttagagttatggaattaggtgagttttgttcaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcaagtaactgttctcgcctcgc 3539577  T
Q  201 g-gtgatcatcttcatcgct 219  Q
    | ||||||||||||| ||||    
T  3539576 gagtgatcatcttcaccgct 3539557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 12 - 218
Target Start/End: Original strand, 18390338 - 18390545
Alignment:
Q  12 atttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttat 111  Q
    ||||||||| || |||||| ||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  18390338 atttaagagcaggaatctgttgaattgatgtagaaatagtgtccagactttagattattcatagaacaatgattagaatcagttttaaggttagagttgt 18390437  T
Q  112 ggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatc 210  Q
    |||||||||| ||| ||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||| |||||||||    
T  18390438 ggaattaggttagtttttgtgaaaactgcattctgcccgtagagctgacattcatcgctcgccatagcgagtagctattctcgcctcgcgagtgatcatc 18390537  T
Q  211 ttcatcgc 218  Q
    ||||||||    
T  18390538 ttcatcgc 18390545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 25142143 - 25141924
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    |||||||||||| |||||||||| |||||| | ||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||||    
T  25142143 gtaattggttgaattaagagtaggaatctgttaaattgatgtagaaatagtgtccagaccttggattattcatagaagaatgattagaatcagttttaag 25142044  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    ||||||||| ||||||||||||||| ||  |||||||||||||||||||||||| |||||||||||| || |||||||||||||  ||||||||||||||    
T  25142043 gttagagttgtggaattaggtgagtttttgtgaaaactgcattctgcccgtagagctgacattcatcacttgccatagcgagtagttgttctcgcctcgc 25141944  T
Q  201 g-gtgatcatcttcatcgct 219  Q
    | ||||||||||||||||||    
T  25141943 gagtgatcatcttcatcgct 25141924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 4 - 184
Target Start/End: Complemental strand, 27852603 - 27852423
Alignment:
Q  4 attggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggtt 103  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||||||||    
T  27852603 attggtggatttaagagtagaaatctgttgaattgatgtagaaatagtgtccagaccttagattattcatagaaaattgattagaatcagttttaaggtt 27852504  T
Q  104 agagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagta 184  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||| ||||||||||||||| | |||||||    
T  27852503 agagttatggaattaggtgagttttgttgaaatttgcattctgcccgtagaactgtcattcatcgctcgccgttgcgagta 27852423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 227 - 439
Target Start/End: Complemental strand, 3539225 - 3539012
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||||||||||||||  ||||| |||||| | |||||||| || ||| ||||||||| |||||||||||||| |||||||| |||    
T  3539225 agttactcagtggcagtcaaccttgtttagggttcttgcgatctctgtcgcacgtaacattctgagttggtctttggggtaggaatgaaagttgtttata 3539126  T
Q  327 attatattgttgtgtagtga-gtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    |||||||||||||  ||||| |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3539125 attatattgttgttcagtgaagtctgaattaatatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatatt 3539026  T
Q  426 gatgtccatctcat 439  Q
    | ||| ||| ||||    
T  3539025 gttgttcatatcat 3539012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 226 - 426
Target Start/End: Complemental strand, 44071977 - 44071777
Alignment:
Q  226 aagttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcat 325  Q
    |||||||||| ||||||||| ||||  ||||| ||||| |||||||| |||||||||| |||| ||||||||| |||||||||||||| |||||||| ||    
T  44071977 aagttactcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatgtaagttgtttat 44071878  T
Q  326 aattatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    |||| ||||||  |  |||||||||||||||| |||| ||||| ||||||||||||| |||||||||||||||||| | |||||||||||||||||||||    
T  44071877 aattgtattgtctttcagtgagtctgaattaacatgattattgttgttggataatttgagatacatatattatgtggaaattgtatgatatagaaatatt 44071778  T
Q  426 g 426  Q
    |    
T  44071777 g 44071777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 227 - 426
Target Start/End: Complemental strand, 22259457 - 22259258
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||| | ||||||||| |||| |||||  ||||| |||||||||||||||||| |||||  |||||||| |||||||||||||| |||||||| |||    
T  22259457 agttacttagtggcagtcagccttatttagcgttcttgcgatctttttcgcacgtggcgttctaagttggtctttggggtaggaatgaaagttgtttata 22259358  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||| ||||||  |  ||||||||||||||||||||||||||| || | |||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  22259357 attgtattgtctttcagtgagtctgaattaatatgaatattgttgctagataatttgagatgcatatattatgtgaatattgtatgatatagaaatattg 22259258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 237 - 439
Target Start/End: Complemental strand, 25141561 - 25141359
Alignment:
Q  237 tggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgt 336  Q
    ||||||||| ||||  ||||| ||||| |||||||| ||||||||||||||| ||||||||| ||||||||| |||| |||||||| |||||| ||||||    
T  25141561 tggcagtcagccttaattagtgttcttgcgatctttgtcgcacgtgacgttctgagttggtctttggggtagaaatgaaagttgtttataattgtattgt 25141462  T
Q  337 tgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatct 436  Q
      |  | ||||||||||||||||| | ||||| ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||| ||| ||| |    
T  25141461 ctttcactgagtctgaattaatataattattgttgttgaataatttgagatacatatattatgtgaatattttatgatatagaaatattgttgttcatat 25141362  T
Q  437 cat 439  Q
    |||    
T  25141361 cat 25141359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 44072493 - 44072297
Alignment:
Q  5 ttggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggtta 104  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||||  ||||||||| | |||||||| |||||||||||||||||||||  |||||    
T  44072493 ttggttaatttaatagtagaaatctgttgaattgatgtagaaatagtgttcagaccttagatgattcatagtacaatgattagaatcagttttggggtta 44072394  T
Q  105 gagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    ||| ||||||||| || |||| ||| ||||| |||  ||||||||||||| |  |   ||||||||||||||||||||||||  || ||||||||||    
T  44072393 gagatatggaattgggagagttttgctgaaacctgggttctgcccgtagagcatatcgtcatcgctcgccatagcgagtaacccttgtcgcctcgcg 44072297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 5986103 - 5985899
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| || ||| ||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||   |||     
T  5986103 ttaagagtaggaacctgttgaattgatgtagaaatagtgtccagaccttagattattcatagaaccatgattagaatcagttttaaggttagaaccatga 5986004  T
Q  114 aattaggtgagtcttgttgaaaa-ctgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatct 211  Q
      || ||||||| ||   ||||| |||||||||||||   || ||||||||||||||| ||||||||||||| ||| |||||||||||| ||||| | ||    
T  5986003 gtttgggtgagtttttgagaaaatctgcattctgccc---gagctgacattcatcgcttgccatagcgagtagctgatctcgcctcgcgagtgatgaact 5985907  T
Q  212 tcatcgct 219  Q
    ||||||||    
T  5985906 tcatcgct 5985899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 227 - 439
Target Start/End: Complemental strand, 27852063 - 27851851
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| | ||||||| ||||  ||||| ||||| |||||||| |||||||||| |||| ||||||||| |||||||||||||||||||| || |||    
T  27852063 agttactcaatcgcagtcagccttacttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatggaagttctttata 27851964  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    | | ||| ||  |  |||||||||||||||||| || ||| | |||||| |||||| | |||||||||||||||| | ||||||||||||||||||||||    
T  27851963 aatgtatagtctttcagtgagtctgaattaataagattatagttgttggttaatttgaaatacatatattatgtggaaattgtatgatatagaaatattg 27851864  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  27851863 ttgttcatatcat 27851851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 439
Target Start/End: Complemental strand, 27860769 - 27860557
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| | | ||||| ||||  ||||| ||||| |||||||| |||||||| | |||| ||||||||| |||||||||||||||||||||||  ||    
T  27860769 agttactcagtagtagtcagccttacttagtgttcttgcgatctttatcgcacgtaatgttctgagttggtcattggggtaggaatggaagttgttttta 27860670  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    | | ||| ||  |  ||||||||||||||||||||| || || |||||| ||| || ||||| |||||||||||| | ||||||||||||||||||||||    
T  27860669 aatgtatagtctttaagtgagtctgaattaatatgattaatgttgttggttaaattgagatagatatattatgtggaaattgtatgatatagaaatattg 27860570  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  27860569 ttgttcatatcat 27860557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 14694252 - 14694094
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||   ||||    
T  14694252 ttaagagtagaaacctgttgaattgatgtagaaatagtgtccagaccttagactattcatagaacaatgattagaatcagttttaaggttagaaccatgg 14694153  T
Q  114 aattaggtgagtcttgttgaaaactgc-attctgcccgtagaactgacattcatcgctcgcc 174  Q
    || ||| ||||| |||   ||| |||| |||||||||   || |||||||||||||||||||    
T  14694152 aactagatgagttttgagaaaatctgcaattctgccc---gagctgacattcatcgctcgcc 14694094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 22259971 - 22259825
Alignment:
Q  8 gttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagag 107  Q
    |||||||||  ||||||||| || ||||||||||||||||||||||  ||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  22259971 gttgatttagtagtagaaatatgttgaattgatgtagaaatagtgttcagaccttagattattcatagtacaatgattagaatcagttttagggttagag 22259872  T
Q  108 ttatggaattaggtgag-tcttgttgaaaactgcattctgcccgtaga 154  Q
     |||| |||| || ||| | ||| ||||| ||| ||||||||||||||    
T  22259871 atatgaaatttgg-gagtttttgctgaaacctgtattctgcccgtaga 22259825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 25046045 - 25045860
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    ||||||||||||| ||| | ||||| ||||||| ||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||   || |    
T  25046045 ttaagagtagaaacctgttaaattggtgtagaattagtgtccagaccttagactattcatagaacaatgattagaatcagttttaaggttagaaccattg 25045946  T
Q  114 aattaggtgagtcttgttgaaaactgc-attctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    |||| | ||||| |||   |||  ||| |||||||||   || ||||||||||||||| ||||||||||||| |||| | |||||||||    
T  25045945 aattggttgagttttgagaaaatatgcaattctgccc---gagctgacattcatcgcttgccatagcgagtagctgtccccgcctcgcg 25045860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 342 - 425
Target Start/End: Complemental strand, 25141266 - 25141183
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    ||||||||| |||||| |||||||||| ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  25141266 agtgagtctaaattaacatgaatattgttgttgaataatttgagatacatatattatgtgaatattatatgatatagaaatatt 25141183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 401
Target Start/End: Original strand, 18390896 - 18391070
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||| | ||||  ||||| || || |||||||| |||||||||| |||  |||||||||||||||||||||||| |||||||| |||    
T  18390896 agttactcagtggcagttagccttacttagtgttgttgcgatctttgtcgcacgtgatgttatgagttggtccttggggtaggaatgaaagttgtttata 18390995  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtg 401  Q
    |   ||| |   |  ||||||||| ||||||||||| ||||  |||||| |||||| || |||||||||||||||    
T  18390996 aaggtatagcctttcagtgagtctaaattaatatgattatttttgttggttaatttgagctacatatattatgtg 18391070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 381
Target Start/End: Original strand, 10897138 - 10897260
Alignment:
Q  259 ttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaat 358  Q
    ||||| |||||| | ||||||||||  ||| ||||||||| |||||||| ||| | |||||||| |||||||||||    |  |||||||||||||||||    
T  10897138 ttcttgcgatctgtgtcgcacgtgatattctgagttggtctttggggtaagaaggaaagttgtttataattatattagctttcagtgagtctgaattaat 10897237  T
Q  359 atgaatattgatgttggataatt 381  Q
    |||||||||| ||||| ||||||    
T  10897238 atgaatattgttgttgaataatt 10897260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 9784970 - 9784917
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9784970 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 9784917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 23069114 - 23069166
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaat 422  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  23069114 tgttgaataatttgagatacatatattatgtgaatattttatgatatagaaat 23069166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 14693696 - 14693601
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    ||||||| | || ||| |||||||||||||  ||||| ||||| | ||||||  ||| |||| |||||||||||||||||||||||| ||||||||    
T  14693696 agttacttagtgacagacaaccttgtttagggttcttgcgatcctcttcgcatatgatgttctgagttggtccttggggtaggaatgaaagttgtt 14693601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 5985532 - 5985470
Alignment:
Q  265 cgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataa 327  Q
    |||||||||||| |||||| |||  ||||||||| ||||||||||||||||||||||| ||||    
T  5985532 cgatctttttcgaacgtgaagttatgagttggtctttggggtaggaatggaagttgtttataa 5985470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 6477921 - 6477958
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  6477921 gagttggtccttggggtaggaatggaagttgtttataa 6477958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 357
Target Start/End: Complemental strand, 19358356 - 19358289
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaa 357  Q
    ||||||||| |||||| | ||||| ||||||||||||||||||||||  |  || |||||||||||||    
T  19358356 gagttggtctttggggcatgaatgaaagttgttcataattatattgtgtttcagcgagtctgaattaa 19358289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 25045486 - 25045396
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    |||||| ||||||||| ||||||||||  ||||| |||||||| ||| |||||| |||  |||||| | |||||| |||||||| ||||||||    
T  25045486 tactcagtggcagtca-ccttgtttagggttcttgcgatctttgtcgtacgtgatgttgtgagttgat-cttgggttaggaatgtaagttgtt 25045396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 164; Significance: 2e-87; HSPs: 3)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 1171 - 1390
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||||||||| ||||| |||||||    
T  1171 gtaattagttgatttaagagtagaaatctgttgaattgatgtagaaataatgtccagaccttacattattcatagaacaatgattataatcacttttaag 1270  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    |||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1271 gttagagttacggaattaggtgagttttgttgaaaactccattctgcccgtagaactgacatccatcgctcgccatagcgagtaactgttctcgcctcgc 1370  T
Q  201 g-gtgatcatcttcatcgct 219  Q
    | ||||||||||||||||||    
T  1371 gagtgatcatcttcatcgct 1390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 4096 - 4260
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| || |||||||||||||||||| ||||| |||||||| ||||||||||| ||| ||||||||| |||||||||||||| |||||||| |||    
T  4096 agttactcagtgtcagtcaaccttgtttagtgttcttgcgatctttgtcgcacgtgacattctgagttggtctttggggtaggaatgaaagttgtttata 4195  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatat 393  Q
    ||| ||  ||  |  |||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  4196 attgta--gtctttcagtgagtctgaattaatatgaagattgttgttggataatttgagatacatat 4260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 8656 - 8820
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| || |||||||||||||||||| ||||| |||||||| ||||||||||| ||| ||||||||| |||||||||||||| |||||||| |||    
T  8656 agttactcagtgtcagtcaaccttgtttagtgttcttgcgatctttgtcgcacgtgacattctgagttggtctttggggtaggaatgaaagttgtttata 8755  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatat 393  Q
    ||| ||  ||  |  |||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  8756 attgta--gtctttcagtgagtctgaattaatatgaagattgttgttggataatttgagatacatat 8820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 4e-76; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 227 - 439
Target Start/End: Original strand, 17258792 - 17259004
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    |||||| || ||| ||||||| ||||||||| ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  17258792 agttacgcattggtagtcaactttgtttagtgttcttgcgatctttttcacacgtgaggttctgagttggtccttggggtaggaatgtaagttgttcata 17258891  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17258892 attatatagttttgtagtgagtctgaattaatatgaatattgatgttagataatttaagatacatgtattatgtgaatattgtatgatatagaaatattg 17258991  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  17258992 ttgttcatatcat 17259004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 13185831 - 13185633
Alignment:
Q  3 aattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggt 102  Q
    ||||| || |||||||||||| |||||  ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  13185831 aattgattaatttaagagtaggaatctattgaattgatgtagaaatagtgtccagaccttagattattcatagaacaatgattagaatcagttttaaggt 13185732  T
Q  103 tagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    ||||||||||||||||||||||| ||    |||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||    
T  13185731 tagagttatggaattaggtgagtttttggaaaaactgcattctgcccgtagagctgacattcatcactcgccatagcgagtagctgttctcgcctcgcg 13185633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 11563664 - 11563456
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    |||||||||||| ||||||||||||||||| |||||           || |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11563664 gtaattggttgaattaagagtagaaatctgttgaat-----------taatgtccagaccttaggttattcatagaacaatgattagaatcagttttaag 11563576  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||     
T  11563575 gttagagttatggaattaggtgagttttgttgaaaactgcattctgcccgcagaactgacattcatcgctcgccatagcgagtaacttctctcgcctcgt 11563476  T
Q  201 g-gtgatcatcttcatcgct 219  Q
    | ||| ||||||||||||||    
T  11563475 gagtggtcatcttcatcgct 11563456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 253 - 426
Target Start/End: Complemental strand, 11563078 - 11562905
Alignment:
Q  253 ttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctga 352  Q
    ||||| ||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||| |||||||| |||||  ||||    |  |||||||||||    
T  11563078 ttagtgttcttgcgatctttgtcgcacgtgacgttctgagttggtctttggggtaggaatgaaagttgtttataatggtattagctttcagtgagtctga 11562979  T
Q  353 attaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    |||||||||||||||| |||||  |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  11562978 attaatatgaatattgttgttgactaatttgagatacatatattatgtgaatattgaatgatatagaaatattg 11562905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 197
Target Start/End: Original strand, 11885683 - 11885864
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| || ||| ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||   ||||    
T  11885683 ttaagagtaggaacctgttgaattgatgtagaaatagtgtccagaccttagactattcatagaacaatgattagaatcagttttaatgttagaaccatgg 11885782  T
Q  114 aattaggtgag-tcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcct 197  Q
     ||| |||||| | ||| | |||| ||||||||||||   || |||||||||||||||| || ||||||||| ||| ||| ||||    
T  11885783 gattgggtgagtttttgataaaaattgcattctgccc---gagctgacattcatcgctcaccgtagcgagtagctgatctagcct 11885864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 342 - 425
Target Start/End: Complemental strand, 11192307 - 11192224
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11192307 agtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatatt 11192224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 342 - 439
Target Start/End: Complemental strand, 11562795 - 11562698
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  11562795 agtgagtctgaattaatatgaatattgttgttgaataattagagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 11562698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 421
Target Start/End: Complemental strand, 13179623 - 13179433
Alignment:
Q  231 actcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataatta 330  Q
    ||||| ||||||||| ||||  ||||| ||||| |||||||| |||||||| | |||  ||||||||||||||| |||||||| |||||||| ||||       
T  13179623 actcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacgtaatgttatgagttggtccttgggataggaatgaaagttgtttataaagg 13179524  T
Q  331 tattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
    ||| |   |  ||||||||| ||||||||||| ||||| |||||| |||||| || ||||||||||||||||| | |||||||||||||||    
T  13179523 tatagcctttcagtgagtctaaattaatatgattattgttgttggttaatttgagctacatatattatgtgaaaaatgtatgatatagaaa 13179433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 16050854 - 16050762
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    |||||||||| || ||| ||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  16050854 ttaagagtaggaacctgttgaattgatgtagaaatagtgtccataccttagattattcatagaacaatgattagaatcagttttaatgttaga 16050762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 348 - 439
Target Start/End: Complemental strand, 6155998 - 6155907
Alignment:
Q  348 tctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| ||| ||||    
T  6155998 tctgaattaatatgaatattgttgttgaataatttgagatacatatgttatgtgaatattgtatgatatagaaatattgttgttcatatcat 6155907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 12509476 - 12509568
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    ||||||||||||| ||| | ||||||||||||| ||||||| |||||||||   |||||||||| ||||||||||||||||||||||||||||    
T  12509476 ttaagagtagaaacctgttaaattgatgtagaactagtgtccagaccttagacaattcatagaataatgattagaatcagttttaaggttaga 12509568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 14441556 - 14441487
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  14441556 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatgtcat 14441487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 17046550 - 17046481
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  17046550 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 17046481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 54876147 - 54876216
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  54876147 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 54876216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 11192469 - 11192400
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  11192469 tgttggataatttgagatacatttattatgtgaatattgtatgatatagaaatattgttgttcatatcat 11192400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 17691469 - 17691538
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  17691469 tgttggataatttgatatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 17691538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 19569033 - 19569102
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  19569033 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 19569102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 42353367 - 42353430
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42353367 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 42353430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 17685507 - 17685563
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||||||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  17685507 tgttggataattagaaatacatatattatgtgaatattgtatgatatagaaatattg 17685563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 290 - 357
Target Start/End: Original strand, 45531248 - 45531315
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaa 357  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||  |  ||||||||||||||||    
T  45531248 gagttggtctttggggtaggaatgaaagttgttcataattatattgtgtttcagtgagtctgaattaa 45531315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 423
Target Start/End: Complemental strand, 13519644 - 13519578
Alignment:
Q  357 atatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    |||||||| ||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||||||    
T  13519644 atatgaatgttgttgttgaataatttgaggtacatatattatgtgaatatcgtatgatatagaaata 13519578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 18700137 - 18700187
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaa 420  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  18700137 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaa 18700187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 6156094 - 6156025
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||| ||| ||| ||||    
T  6156094 tgttgaataatttgagatacatatgttatgtgaatattgtatgatatagaaatgttgttgttcatatcat 6156025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 12470190 - 12470141
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatataga 419  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  12470190 tgttgaataatttgagatacatatattatgtgaatattgtatgatataga 12470141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 14671212 - 14671163
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatataga 419  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  14671212 tgttgaataatttgagatacatatattatgtgaatattgtatgatataga 14671163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 14682711 - 14682662
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatataga 419  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  14682711 tgttgaataatttgagatacatatattatgtgaatattgtatgatataga 14682662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 43889463 - 43889516
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  43889463 tgttgaataatttgagatacatatattatgtgaatattgtatgatttagaaata 43889516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 16059715 - 16059620
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    ||||||||| ||||| ||| ||||   |||| ||||| ||||| || |||||||||| |||  ||||||||| |||||||||||||||||||||||    
T  16059715 agttactcattggcaatcagccttacctagtgttcttgcgatcattgtcgcacgtgatgttatgagttggtctttggggtaggaatggaagttgtt 16059620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 15447013 - 15447075
Alignment:
Q  35 attgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    |||||||||||||||||||| || ||||||  |||||||||||||||  ||||||||||||||    
T  15447013 attgatgtagaaatagtgtccagtccttagactattcatagaacaattcttagaatcagtttt 15447075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 9511829 - 9511898
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| | ||||||||||||||||||||| ||||| | ||||||||||| ||| ||| ||||    
T  9511829 tgttggataatttgaaatacatatattatgtgaatatggtatgttgtagaaatattgttgttcatatcat 9511898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 9519804 - 9519873
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| | ||||||||||||||||||||| ||||| | ||||||||||| ||| ||| ||||    
T  9519804 tgttggataatttgaaatacatatattatgtgaatatggtatgttgtagaaatattgttgttcatatcat 9519873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 319
Target Start/End: Original strand, 12512388 - 12512476
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagtt 319  Q
    |||||| ||||||||||||||||||||  ||||| |||||||| |||||||||| |||  |||||| | |||||||||| |||| |||||    
T  12512388 tactcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttgagagttgat-cttggggtagaaatgaaagtt 12512476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 16050747 - 16050702
Alignment:
Q  156 ctgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  16050747 ctgacattcatcgctcgccatagcgagtagctgctctcgcctcgcg 16050702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 14250207 - 14250299
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    |||||||||||||  || | | ||||||||||| ||||||| |||||||||  |||||| |  |  |||||||||||||||||||||||||||    
T  14250207 ttaagagtagaaacttgttaagttgatgtagaattagtgtccagaccttagaatattcacaagatgatgattagaatcagttttaaggttaga 14250299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 12158690 - 12158648
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattata 332  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  12158690 gagttggtccttggggtaggaatggaagttgttaatgattata 12158648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 17548176 - 17548213
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17548176 gagttggtccttggggtaggaatggaagttgtttataa 17548213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 11886238 - 11886332
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    ||||||||| ||| ||||||||||||||||  | ||| |||| ||  |||||||||| |||  |||||| | |||||| |||||||||||||||||    
T  11886238 agttactcagtggtagtcaaccttgtttagggtccttgcgatgttcgtcgcacgtgatgttgtgagttgat-cttgggataggaatggaagttgtt 11886332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 16044855 - 16044760
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    ||||||||| ||||| ||| ||||   |||| ||||| ||||| || |||||||||| |||  || |||||| |||||||||||||| ||||||||    
T  16044855 agttactcagtggcaatcagccttacctagtgttcttgcgatcattgtcgcacgtgatgttatgaattggtctttggggtaggaatgaaagttgtt 16044760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 42324115 - 42324186
Alignment:
Q  32 tgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggtt 103  Q
    |||||| ||| ||||| ||||| |||||||||| |||||||||| | ||||||||||| || ||||| ||||    
T  42324115 tgaattaatgaagaaacagtgtttagaccttagattattcatagtataatgattagaaccaattttagggtt 42324186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 421
Target Start/End: Original strand, 52338594 - 52338725
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatac 389  Q
    ||||||||| ||||||||||||||||||||||| ||||   ||| | | |  ||||| ||| |  |||||| | |  || |||||| ||||||||| ||     
T  52338594 gagttggtcattggggtaggaatggaagttgtttataaaggtatagcttttcagtgaatctaagctaatataattgatgttgttggttaatttaagctat 52338693  T
Q  390 atatattatgtgaatattgtatgatatagaaa 421  Q
    |||||||||||| | | |||||||||||||||    
T  52338694 atatattatgtggaaaatgtatgatatagaaa 52338725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 15447584 - 15447654
Alignment:
Q  244 caaccttgtttagttttcttacgatctttt-tcgcacgtgacgttccgagttggtccttggggtaggaatg 313  Q
    ||||||||||||| |||||| ||||||||| |||||| ||| |||  |||||| ||||| |||||||||||    
T  15447584 caaccttgtttaggtttcttgcgatcttttgtcgcacatgatgttatgagttgatccttagggtaggaatg 15447654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 10550691 - 10550654
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  10550691 gagttggtccttgggataggaatggaagttgtttataa 10550654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 14250693 - 14250746
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtga 283  Q
    |||||| |||||||||||||||||||   ||||| |||||||| ||||||||||    
T  14250693 tactcagtggcagtcaaccttgtttaaggttcttgcgatctttgtcgcacgtga 14250746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 422
Target Start/End: Complemental strand, 16059597 - 16059520
Alignment:
Q  345 gagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaat 422  Q
    |||| |||||||| |||| || || |||||| || ||| | |||||||||||||||| | | ||||||||||||||||    
T  16059597 gagtttgaattaaaatgattaatgttgttggttattttgaaatacatatattatgtggaaagtgtatgatatagaaat 16059520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 22146901 - 22146966
Alignment:
Q  32 tgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    |||||| ||| |||||||||||  | ||||||| || ||||||| ||||||||||||| |||||||    
T  22146901 tgaattaatgaagaaatagtgttcataccttagattgttcatagtacaatgattagaaccagtttt 22146966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 23052524 - 23052608
Alignment:
Q  133 aaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatcttcatcgct 219  Q
    |||||||||||||||||| ||    |||||||||||||||||||||||| | |   ||||||||||||| ||||| | ||||||||||    
T  23052524 aaaactgcattctgcccgaagc---gacattcatcgctcgccatagcgaatgatgattctcgcctcgcgagtgatgaacttcatcgct 23052608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 37641637 - 37641702
Alignment:
Q  32 tgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    |||||| ||| |||||||||||  | ||||||| || ||||||| ||||||||||||| |||||||    
T  37641637 tgaattaatgaagaaatagtgttcataccttagattgttcatagtacaatgattagaaccagtttt 37641702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 3 - 219
Target Start/End: Complemental strand, 108229 - 108017
Alignment:
Q  3 aattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggt 102  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||    
T  108229 aattggttgatttaagagtagaa-tctgttgaattgatgtagaaatagtgtccagaccttagattattcatagaacaatgattaaaatcagttttaaggt 108131  T
Q  103 tagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg- 201  Q
    ||||||||||||||||||||||| ||   |||||||||||| |||||||| ||||||||||||||||||||    ||||||||| ||| ||||||||||     
T  108130 tagagttatggaattaggtgagtttttgggaaaactgcattatgcccgtataactgacattcatcgctcgc----gcgagtaacagttttcgcctcgcga 108035  T
Q  202 gtgatcatcttcatcgct 219  Q
    ||||||||||||||||||    
T  108034 gtgatcatcttcatcgct 108017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 9e-71; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 23501611 - 23501392
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    |||||| |||||||||| |||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||    
T  23501611 gtaatttgttgatttaaaagtagaaatctattgaattgatgtagaaatagtgtccagaccttagattattcatataacaatgattagaatcagttttaag 23501512  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    |||||||| |||||||||||||| | ||| |||||| || |||||||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||    
T  23501511 gttagagtcatggaattaggtgaattttgctgaaaattgtattctgcccgtagaactgacattcatcgctcgccatagtgagcaacacttctcgcctcgc 23501412  T
Q  201 g-gtgatcatcttcatcgct 219  Q
    | | ||| ||||||||||||    
T  23501411 gagcgatgatcttcatcgct 23501392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 31732031 - 31732235
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||||||||| | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  31732031 ttaagagtaggaatatgttgaattgatgtagaaatagtgtccagaccttagatcattcatagaacaatgattagtatcagttttatggttagagttgtgg 31732130  T
Q  114 aattaggtgag-tcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatct 211  Q
    ||||||||||| | ||| |||||||||||||||||||   || ||||||||||||||||||||||||||||| ||| |||||||||||| ||||| |||     
T  31732131 aattaggtgagtttttggtgaaaactgcattctgccc---gagctgacattcatcgctcgccatagcgagtagctgctctcgcctcgcgagtgatgatcc 31732227  T
Q  212 tcatcgct 219  Q
    ||||||||    
T  31732228 tcatcgct 31732235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 227 - 439
Target Start/End: Complemental strand, 23501112 - 23500900
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||||||||||||||  ||||| |||||| | |||||||| |||||| ||||||||||||||||||||| || ||||| || |||    
T  23501112 agttactcagtggcagtcaaccttgtttagggttcttgcgatctctgtcgcacgtaacgttctgagttggtccttggggtaggagtgaaagttatttata 23501013  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
     ||  | |||  |  |||||  |||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  23501012 gttggactgtctttcagtgatcctgaattaatatgaatattgttgttggataatttgagatacttatattatgtgaatattgtatgatatagaaatattg 23500913  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  23500912 ttgttcatatcat 23500900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 227 - 422
Target Start/End: Original strand, 6083355 - 6083550
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||||||||| ||||| ||||| || ||||| ||||||||| ||||| ||||||||| || ||||||||||| |||||||| |||    
T  6083355 agttactcaatggcagtcaaccttgcttagtgttcttgcgttctttgtcgcacgtgtcgttctgagttggtctttagggtaggaatgaaagttgtttata 6083454  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaat 422  Q
    ||| |||| |  |  | ||||||||||||||| |||||| || |||||||||| || | || |||||||||||||||||||||||| | |||||||    
T  6083455 attgtattatctttcaatgagtctgaattaatctgaataatgttgttggataaattgaaatgcatatattatgtgaatattgtatgttgtagaaat 6083550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 259 - 421
Target Start/End: Original strand, 31735522 - 31735683
Alignment:
Q  259 ttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaat 358  Q
    ||||| |||||||| |||||||||| |||| ||||||||| |||||||||||||| |||||||| ||||||||||||| ||  ||||||||||||||||     
T  31735522 ttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatg-aagttgtttataattatattgtggttcagtgagtctgaattaaa 31735620  T
Q  359 atgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
    |||| || || |||||| |||||| | |||||||||||||||| | | ||| |||||||||||    
T  31735621 atgattaatgttgttggttaatttgaaatacatatattatgtggaaaatgtttgatatagaaa 31735683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 34 - 219
Target Start/End: Original strand, 24550313 - 24550497
Alignment:
Q  34 aattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatggaattaggtgagtcttgttga 133  Q
    |||||||||| |||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||   || ||||| | ||||| |||   |    
T  24550313 aattgatgtaaaaatagtgtcaagaccttagactattcatagaacaatgattagaatcagttttaaggttagaaccattgaattggatgagttttgagaa 24550412  T
Q  134 aaactgca-ttctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatcttcatcgct 219  Q
    || ||||| ||||||||   || ||| ||||||||||||||||||||||| |  || |||||||||||| ||||| | ||||||||||    
T  24550413 aatctgcacttctgccc---gagctgtcattcatcgctcgccatagcgagcagatgatctcgcctcgcgagtgatgaacttcatcgct 24550497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 342 - 417
Target Start/End: Original strand, 23491997 - 23492072
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatata 417  Q
    ||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  23491997 agtgagtctgaattaatatgaattttgttgttgaataatttgagatacatatattatgtgaatattgtatgatata 23492072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 342 - 417
Target Start/End: Original strand, 23497595 - 23497670
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatata 417  Q
    ||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  23497595 agtgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatata 23497670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 293 - 421
Target Start/End: Original strand, 22212139 - 22212268
Alignment:
Q  293 ttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaat-taatatgaatattgatgttggataatttaagatacat 391  Q
    |||||| |||||||||||||| |||| ||| ||||||  |||||  |  ||||||||||||  ||||||||||| || |||||| |||||| ||||||||    
T  22212139 ttggtctttggggtaggaatgaaagtcgtttataattgcattgtcttacagtgagtctgaaagtaatatgaataatgttgttggttaatttgagatacat 22212238  T
Q  392 atattatgtgaatattgtatgatatagaaa 421  Q
    |||||||||||| |||||||||||||||||    
T  22212239 atattatgtgaaaattgtatgatatagaaa 22212268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 19655893 - 19655962
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  19655893 tgttggataattcgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 19655962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 22806221 - 22806168
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22806221 tgttgaataatttaagatacatatattatgtgaatattgtatgatatagaaata 22806168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 425
Target Start/End: Original strand, 23491835 - 23491890
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23491835 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatatt 23491890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 425
Target Start/End: Original strand, 23497433 - 23497488
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23497433 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatatt 23497488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 15705265 - 15705331
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  15705265 tgaatatttttgttgaataatttgagatacatatattatgtgaatattgtatgatataaaaatattg 15705331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 19773373 - 19773426
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19773373 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 19773426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 423
Target Start/End: Complemental strand, 23655739 - 23655673
Alignment:
Q  357 atatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    |||||||| ||| ||||| ||| ||| || |||||||||||||||||||||||||||||||||||||    
T  23655739 atatgaatgttgttgttgaatattttgaggtacatatattatgtgaatattgtatgatatagaaata 23655673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 28947742 - 28947663
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||  ||||||||||||| | ||||||||||||||||||| ||||||| | ||||||||||| ||| ||| ||||    
T  28947742 tgaatatttttgttggataatttgaaatacatatattatgtgaatgttgtatgctgtagaaatattgttgttcatatcat 28947663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 20177901 - 20177839
Alignment:
Q  35 attgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    ||||||||||||| |||||  ||||||||| |||||||||| ||||||||||||| |||||||    
T  20177901 attgatgtagaaacagtgttcagaccttagattattcatagtacaatgattagaaccagtttt 20177839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 22158090 - 22158152
Alignment:
Q  35 attgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    ||||||||||||| |||||  ||||||||| |||||||||| ||||||||||||| |||||||    
T  22158090 attgatgtagaaacagtgttcagaccttagattattcatagtacaatgattagaaccagtttt 22158152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 352
Target Start/End: Original strand, 22376480 - 22376605
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| |||||| | | |||||||||  ||||| |||||||| ||||||  || |||  ||||||||||||||||||||||||  ||||||| | |    
T  22376480 agttactcagtggcagactatcttgtttagggttcttgcgatctttgtcgcacaagatgttatgagttggtccttggggtaggaatgagagttgtttaaa 22376579  T
Q  327 attatattgttgtgtagtgagtctga 352  Q
    ||  |||||||||  || ||||||||    
T  22376580 atattattgttgttcagagagtctga 22376605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 24267188 - 24267151
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  24267188 gagttggtccttggggtaggaatggaagttgtttataa 24267151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 352
Target Start/End: Original strand, 20077998 - 20078102
Alignment:
Q  248 cttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgag 347  Q
    |||||||||  ||||| |||||||| ||||||| || |||  |||||| ||||||||||||||||||| |||| | |||||  ||| | |||  ||||||    
T  20077998 cttgtttagggttcttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttgattataatactatcgatgttcagtgag 20078097  T
Q  348 tctga 352  Q
    |||||    
T  20078098 tctga 20078102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 409
Target Start/End: Original strand, 17318786 - 17318825
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgt 409  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  17318786 tgttggataatttgaaatacatatattatgtgaatattgt 17318825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 8226873 - 8226938
Alignment:
Q  32 tgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    |||||| ||| |||||||||||  | ||||||| || ||||||| ||||||||||||| |||||||    
T  8226873 tgaattaatgaagaaatagtgttcataccttagattgttcatagtacaatgattagaaccagtttt 8226938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 23532029 - 23532094
Alignment:
Q  32 tgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    |||||| ||| |||||||||||  | ||||||| || ||||||| ||||||||||||| |||||||    
T  23532029 tgaattaatgaagaaatagtgttcataccttagattgttcatagtacaatgattagaaccagtttt 23532094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 319
Target Start/End: Original strand, 24550851 - 24550939
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagtt 319  Q
    |||||| ||||||||||||||||||||  ||||| |||||||| |||| | ||| |||  |||||| | ||||||||||  |||||||||    
T  24550851 tactcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcgcatgatgttgagagttgat-cttggggtagagatggaagtt 24550939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 409
Target Start/End: Complemental strand, 23655779 - 23655727
Alignment:
Q  357 atatgaatattgatgttggataatttaagatacatatattatgtgaatattgt 409  Q
    |||||||| ||| ||||| ||||||||| ||||||||||||| ||||| ||||    
T  23655779 atatgaatgttgttgttgaataatttaaaatacatatattatatgaatgttgt 23655727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 25753358 - 25753282
Alignment:
Q  21 tagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    |||||| ||| |||||| ||| ||||| | |||||||||| ||| || || |||| ||||||||||||| |||||||    
T  25753358 tagaaacctgttgaattaatgaagaaacaatgtctagaccgtagattgtttatagtacaatgattagaaccagtttt 25753282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 25755528 - 25755452
Alignment:
Q  21 tagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    |||||| ||| |||||| ||| ||||| | |||||||||| ||| || || |||| ||||||||||||| |||||||    
T  25755528 tagaaacctgttgaattaatgaagaaacaatgtctagaccgtagattgtttatagtacaatgattagaaccagtttt 25755452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695 (Bit Score: 133; Significance: 5e-69; HSPs: 2)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 227 - 439
Target Start/End: Complemental strand, 847 - 635
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||| ||||||||||||||||||||||  ||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||| |||||||| ||     
T  847 agttacttactggcagtcaaccttgtttagggttcttgcgatctttttcgcacgtaacgttctgagttggtctttggggtaggaatgaaagttgtttatt 748  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||||| |||||||  ||||||||||||||| ||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  747 attatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattg 648  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  647 ttgttcatatcat 635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 1189 - 1147
Alignment:
Q  159 acattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  1189 acattcatcgctcgccatagcgagtaattcctctcgcctcgcg 1147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 117; Significance: 2e-59; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 227 - 439
Target Start/End: Original strand, 136184 - 136396
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| || |||||| |||| |||||| ||||| |||||||| |||||||||| |||| ||||||||| |||||||||||||| |||||||| |||    
T  136184 agttactcagtgacagtcatccttatttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatgaaagttgtttata 136283  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    |||| |||||| |  ||||||||||||||||||||| |||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  136284 attacattgtttttcagtgagtctgaattaatatgattattgtagttggataatttgagatacatatattatgtgaaaattgtatgatatagaaatattg 136383  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  136384 ttgttcatatcat 136396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 3 - 186
Target Start/End: Original strand, 135618 - 135801
Alignment:
Q  3 aattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggt 102  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||||  ||||||||| | |||||||| |||||||||||||||||||||  |||    
T  135618 aattggttaatttaatagtagaaatctgttgaattgatgtagaaatagtgttcagaccttagatgattcatagtacaatgattagaatcagttttggggt 135717  T
Q  103 tagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaac 186  Q
    ||||| ||||||||| || |||| ||| ||||| ||   ||||||||||||| | ||    |||||||||||||||||||||||    
T  135718 tagagatatggaattgggagagttttgctgaaacctaagttctgcccgtagagcagatcgccatcgctcgccatagcgagtaac 135801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 135825 - 135866
Alignment:
Q  160 cattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    |||||||||||||||||||||||||||  || ||||||||||    
T  135825 cattcatcgctcgccatagcgagtaacccttgtcgcctcgcg 135866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 116; Significance: 7e-59; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 110100 - 109914
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| |||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  110100 ttaagagtaggaatctgttgaattgatgtagaaataatgtccaaaccttaggttattcatagaacaatgattagaatcagttttaaggttagggttgtgg 110001  T
Q  114 aattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    || ||||||||| ||  |||||||||||||||||||||||| |||||||||||| |||||| |||||||||| |  ||||||||||||    
T  110000 aaataggtgagtttttgtgaaaactgcattctgcccgtagagctgacattcatcactcgcc-tagcgagtaattcctctcgcctcgcg 109914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 439
Target Start/End: Complemental strand, 109650 - 109438
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||| ||||  ||||  ||||| |||||||| || ||||||| |||  ||||||| | ||||||||| ||||||||||||| |||    
T  109650 agttactcagtggcagtcagccttacttagggttcttgcgatctttgtcacacgtgatgttatgagttggcctttggggtagaaatggaagttgtttata 109551  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    |   ||| |   |  || ||||||||||||| |||| || || |||||| |||||| |||||||||||||||||| | |||||||||| |||| |||||     
T  109550 aaggtatagccttacagagagtctgaattaaaatgattaatgttgttggttaatttgagatacatatattatgtggaaattgtatgatgtagagatatta 109451  T
Q  427 atgtccatctcat 439  Q
    |||| ||| ||||    
T  109450 atgttcatatcat 109438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 59770 - 59733
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  59770 gagttggttcttggggtaggaatggaagttgtttataa 59733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 3e-58; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 3 - 219
Target Start/End: Original strand, 21618043 - 21618257
Alignment:
Q  3 aattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggt 102  Q
    ||||| || |||| ||||||| ||| || ||||||||||||||  ||||||| | ||||||| |||||||||| |||||||||||||||| |||||||||    
T  21618043 aattgattaatttgagagtaggaatatgttgaattgatgtaga--tagtgtccaaaccttagattattcatagcacaatgattagaatcaattttaaggt 21618140  T
Q  103 tagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg- 201  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| |  ||||||||||||||| |||||||||| ||||||||||||||||     
T  21618141 tagagttatggaattaggtgagttttg-tgaaatctgcattctgcccgtagagccaacattcatcgctcgctatagcgagtagctgttctcgcctcgcga 21618239  T
Q  202 gtgatcatcttcatcgct 219  Q
    |||||||| |||||||||    
T  21618240 gtgatcatattcatcgct 21618257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 227 - 439
Target Start/End: Original strand, 21618608 - 21618819
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||| | ||||| ||||||||  ||||| ||||||||||||||||| ||||||  |||||||| ||||| ||||||||||||||||| |||    
T  21618608 agttactcagtggaattcaactttgtttagggttcttgcgatctttttcgcacgtaacgttctaagttggtctttggg-taggaatggaagttgtttata 21618706  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||||| |||||||  ||||||||||||||| ||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  21618707 attatgttgttgttcagtgagtctgaattattatgaatattcttgttggataatttgagataaatatattatgtgaatattgtatgatatagaaatattg 21618806  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  21618807 ttgttcatatcat 21618819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 227 - 424
Target Start/End: Complemental strand, 29914759 - 29914562
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||||||||||||||| |||||  |||| || |||||||||||||||  |||| ||| ||  |||||||||| |||| ||| |||    
T  29914759 agttactcagtggcagtcaaccttgtttagtgttcttgtgatccttgtcgcacgtgacgttctaagttagtctttcaggtaggaatgaaagtggtttata 29914660  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatat 424  Q
    |||||||||||||  ||||||||||||||||||||||| ||| | |||||| |||| |||||||||||||||| ||||||||||| ||||||||||||    
T  29914659 attatattgttgttcagtgagtctgaattaatatgaatgttgtttttggatgatttgagatacatatattatgcgaatattgtataatatagaaatat 29914562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 10954016 - 10953831
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||||||  || | ||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||   || |    
T  10954016 ttaagagtagaaacttgttaaattgatgtagaaatagtgtccagaccttagactattcatagaacaatgattagaatcagttttaaggttagaaccattg 10953917  T
Q  114 aattaggtgagtcttgttgaaaactgc-attctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    |||| | ||||| |||   ||| || | |||||||||   || ||||||||||||||||||||||||||||||||| | ||||||||||    
T  10953916 aattggatgagttttgagaaaatctacaattctgccc---gagctgacattcatcgctcgccatagcgagtaactgatatcgcctcgcg 10953831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 344 - 426
Target Start/End: Complemental strand, 20565778 - 20565696
Alignment:
Q  344 tgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||||||||||||||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20565778 tgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatattg 20565696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 25249953 - 25250137
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| || ||| | ||||||||||||||||||||| |||||||||  |||||||||||||| || || ||||||||||||||||||    ||||    
T  25249953 ttaagagtaggaacctgttaaattgatgtagaaatagtgtccagaccttagactattcatagaacaacgactataatcagttttaaggttaggaccatgg 25250052  T
Q  114 aattaggtgagtcttgttgaaaa-ctgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    | || ||||||| ||   ||||| ||| |||||||||   || ||||||||||||||||||||||||||| | |||| ||||||||||    
T  25250053 atttgggtgagtttttgagaaaacctgtattctgccc---gagctgacattcatcgctcgccatagcgagcagctgtcctcgcctcgc 25250137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 25313737 - 25313921
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| || ||| | ||||||||||||||||||||| |||||||||  |||||||||||||| || || ||||||||||||||||||    ||||    
T  25313737 ttaagagtaggaacctgttaaattgatgtagaaatagtgtccagaccttagactattcatagaacaacgactataatcagttttaaggttaggaccatgg 25313836  T
Q  114 aattaggtgagtcttgttgaaaa-ctgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc 200  Q
    | || ||||||| ||   ||||| ||| |||||||||   || ||||||||||||||||||||||||||| | |||| ||||||||||    
T  25313837 atttgggtgagtttttgagaaaacctgtattctgccc---gagctgacattcatcgctcgccatagcgagcagctgtcctcgcctcgc 25313921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 227 - 430
Target Start/End: Original strand, 20469692 - 20469895
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||| |||   ||||  ||||| |||||||| ||||||||||  ||  ||||||||| |||||| ||||| |||||||||| |||    
T  20469692 agttactcagtggcagtcagcctcacttagagttcttgcgatctttgtcgcacgtgatattatgagttggtctttggggcaggaaaggaagttgtttata 20469791  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    | | ||| |   |  || ||||||||||||| |||| || || |||||| |||||| |||||||||||||||||| | ||||||||||||||| ||||||    
T  20469792 aatgtatagcctttcagagagtctgaattaaaatgattaatgttgttggttaatttgagatacatatattatgtggaaattgtatgatatagagatattg 20469891  T
Q  427 atgt 430  Q
    ||||    
T  20469892 atgt 20469895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 20469302 - 20469383
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtt 95  Q
    |||||||||| | |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  20469302 ttaagagtaggactctgttgaattgatgtagaaatagtgtccagaccttagattattcatagaacaatgattagaatcagtt 20469383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 32608055 - 32608121
Alignment:
Q  357 atatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    |||||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32608055 atatgaatgttgttgttgaataattttagatacatatattatgtgaatattgtatgatatagaaata 32608121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 78 - 219
Target Start/End: Complemental strand, 29915152 - 29915010
Alignment:
Q  78 caatgattagaatcagttttaaggttagagttatggaattaggt-gagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccat 176  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||  | | ||| || ||| ||  ||||| ||||||| | ||   ||||||||||||||    
T  29915152 caatgattaaaatcagttttaaggttagaattatggaattaggtaaatttttgctg-aaattgtgttctgtccgtagagcagatcgtcatcgctcgccat 29915054  T
Q  177 agcgagtaactgttctcgcctcgcg-gtgatcatcttcatcgct 219  Q
    |||||||||   ||| ||||||||| ||||||||||||||||||    
T  29915053 agcgagtaatccttcccgcctcgcgagtgatcatcttcatcgct 29915010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 36509507 - 36509573
Alignment:
Q  357 atatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    |||||||| ||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||||||    
T  36509507 atatgaatgttgttgttgaataatttgaggtacatatattatgtgaatatcgtatgatatagaaata 36509573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 327
Target Start/End: Original strand, 25250468 - 25250565
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataa 327  Q
    |||||| ||||||||| || || ||||| ||||| | |||||| |||||||||| |||  ||||||||| |||||||||||||| |||||||| ||||    
T  25250468 tactcagtggcagtcagccctgcttagtgttcttgcaatctttgtcgcacgtgatgttatgagttggtctttggggtaggaatgaaagttgtttataa 25250565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 327
Target Start/End: Original strand, 25314253 - 25314350
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataa 327  Q
    |||||| ||||||||| || || ||||| ||||| | |||||| |||||||||| |||  ||||||||| |||||||||||||| |||||||| ||||    
T  25314253 tactcagtggcagtcagccctgcttagtgttcttgcaatctttgtcgcacgtgatgttatgagttggtctttggggtaggaatgaaagttgtttataa 25314350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 20565952 - 20565873
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    |||||||  |||||||||||||| | ||||||||||||||||||| ||||||| | ||||||||||| ||| ||| ||||    
T  20565952 tgaatatctatgttggataatttgaaatacatatattatgtgaatgttgtatgttgtagaaatattgttgttcatatcat 20565873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 423
Target Start/End: Original strand, 21406324 - 21406447
Alignment:
Q  300 ttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatg 399  Q
    |||||||| ||||| |||||||  |||||| ||||||  |  | ||| ||||||||||||||||   || |||||| |||||| ||||  |||||||| |    
T  21406324 ttggggtatgaatgaaagttgtatataattgtattgtcttacaatgaatctgaattaatatgaagtatgttgttgggtaatttgagatgtatatattacg 21406423  T
Q  400 tgaatattgtatgatatagaaata 423  Q
    |||||||||||||||||| |||||    
T  21406424 tgaatattgtatgatatacaaata 21406447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 421
Target Start/End: Original strand, 22357587 - 22357718
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatac 389  Q
    ||||||||||||||||||||||||||||||||| ||||   ||| | | |  ||||| ||| || |||||| | |  || |||||| ||||||||| ||     
T  22357587 gagttggtccttggggtaggaatggaagttgtttataaaggtatagcttttcagtgaatctaaactaatataattgatgttgttggttaatttaagctat 22357686  T
Q  390 atatattatgtgaatattgtatgatatagaaa 421  Q
    |||||||||||| | | |||||||||||||||    
T  22357687 atatattatgtggaaaatgtatgatatagaaa 22357718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 30616520 - 30616449
Alignment:
Q  35 attgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    ||||||||||| |||||||| ||||||||   |||||||||||||||| |||||||||||||| | ||||||    
T  30616520 attgatgtagagatagtgtccagaccttataatattcatagaacaatgtttagaatcagttttgatgttaga 30616449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 10953448 - 10953368
Alignment:
Q  238 ggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagtt 319  Q
    ||||||||| |||||||||  ||||| |||||||| |||||||||| |||  ||||||  ||||||| ||||||||||||||    
T  10953448 ggcagtcaatcttgtttagggttcttgcgatctttgtcgcacgtgaagttgtgagttga-ccttgggataggaatggaagtt 10953368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 25576696 - 25576751
Alignment:
Q  265 cgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttg 320  Q
    |||||||| |||||||||| |||  |||||| ||||||||||||||||||| ||||    
T  25576696 cgatctttgtcgcacgtgaggttatgagttgatccttggggtaggaatggaggttg 25576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 8952681 - 8952718
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  8952681 gagttggtcattggggtaggaatggaagttgtttataa 8952718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 25574290 - 25574357
Alignment:
Q  244 caaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaat 312  Q
    |||||||||||||  || || |||||||| |||||||||| |||  |||||| ||||||||||||||||    
T  25574290 caaccttgtttagggtt-ttgcgatctttgtcgcacgtgaggttatgagttgatccttggggtaggaat 25574357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 25575483 - 25575550
Alignment:
Q  244 caaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaat 312  Q
    |||||||||||||  || || |||||||| |||||||||| |||  |||||| ||||||||||||||||    
T  25575483 caaccttgtttagggtt-ttgcgatctttgtcgcacgtgaggttatgagttgatccttggggtaggaat 25575550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 227 - 426
Target Start/End: Original strand, 20591 - 20790
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| |||||||||  ||| |||||| ||||| |||||||| |||||| ||| |||| ||||||||| |||||||||||||| |||||||| |||    
T  20591 agttactcagtggcagtcaggcttatttagtgttcttgcgatctttgtcgcacatgatgttctgagttggtctttggggtaggaatgaaagttgtttata 20690  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    |||  |||||  |  ||||||||||||||||||||| |||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  20691 attgcattgtctttcagtgagtctgaattaatatgattattgtagttggataatttgagatacatatattatgtgaaaattgtatgatatagaaatattg 20790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 20202 - 20348
Alignment:
Q  5 ttggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggtta 104  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||||||| |||   |||| | ||||||||||||||||||||||||||||||  |||||    
T  20202 ttggttgatttaagagtagaaatctgttgaattaatgtataaatagtgtttag---ttagatgattcatagaacaatgattagaatcagttttggggtta 20298  T
Q  105 gagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtaga 154  Q
    ||| ||||||||| || |||| ||| ||||| |||  |||||||||||||    
T  20299 gagatatggaattgggagagttttgctgaaacctgagttctgcccgtaga 20348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 3 - 219
Target Start/End: Complemental strand, 67057 - 66841
Alignment:
Q  3 aattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggt 102  Q
    ||||||||| |||||||||| || | || ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  67057 aattggttggtttaagagtataatt-tgttgaattgatgtagaaatagtgtctagaccttagattattcatagaacaacgattagaattagttttaaggt 66959  T
Q  103 tagagttatggaattaggt-gagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    |  |||||| ||||||| | || | ||  || ||||||  ||||||||||||| | |||  |||||||||||||||||||||||||| ||||||||||||    
T  66958 tgaagttattgaattagatggatttttaatg-aaactgtgttctgcccgtagagcagaccgtcatcgctcgccatagcgagtaactgctctcgcctcgcg 66860  T
Q  202 -gtgatcatcttcatcgct 219  Q
     ||||||||||||||||||    
T  66859 agtgatcatcttcatcgct 66841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 227 - 439
Target Start/End: Complemental strand, 66496 - 66284
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||| ||||  ||||| ||||| |||||||| |||||||||| |||| ||||||||| |||||||||||||| |||||||| |||    
T  66496 agttactcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatgaaagttgtttata 66397  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    |   |||  |  |  ||||||||||||||||||||| ||||| |||||| |||||| |||||||||||| ||||| | ||||||||||||||||||||||    
T  66396 aaagtataatctttcagtgagtctgaattaatatgattattgttgttggttaatttgagatacatatatgatgtggaaattgtatgatatagaaatattg 66297  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  66296 ttgttcatatcat 66284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 237 - 439
Target Start/End: Original strand, 3665 - 3867
Alignment:
Q  237 tggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgt 336  Q
    ||||||||| ||||||||||| ||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||| |||| ||| | || | ||||||    
T  3665 tggcagtcagccttgtttagtgttcttgcgatctttgtcgcacgtgacgttctgagttggtctttggggtaggaatgaaagtcgtttacaaatgtattgt 3764  T
Q  337 tgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatct 436  Q
      |  ||||| |||||||||||||||| | || ||||||||||||| |||||||||||||||||||||| | |||||||||||||||||| ||| ||| |    
T  3765 ctttcagtgaatctgaattaatatgaagaatgttgttggataatttgagatacatatattatgtgaataatatatgatatagaaatattgttgttcatat 3864  T
Q  437 cat 439  Q
    |||    
T  3865 cat 3867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 3164 - 3269
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    |||||||||||||| ||  ||||||||||| ||||||||||||||||  ||||  | |||||||  ||||||||| |||||||||||||| | ||||| |    
T  3164 gtaattggttgattaaatggtagaaatctgttgaattgatgtagaaactgtgtacaaaccttagagtattcatagtacaatgattagaat-aattttagg 3262  T
Q  101 gttagag 107  Q
    |||||||    
T  3263 gttagag 3269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 1e-48; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 3 - 219
Target Start/End: Complemental strand, 13302841 - 13302625
Alignment:
Q  3 aattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggt 102  Q
    ||||||||||||||||||||||| | || ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||    
T  13302841 aattggttgatttaagagtagaatt-tgttgaattgatgtagaaatagtgtccagaccttagattattcatagaacaatgattagaatcagtattaaggt 13302743  T
Q  103 tagagttatggaattaggt-gagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgc- 200  Q
    | ||||||||||||||  | || | ||| || ||||||  ||||||||||||| | ||   |||||||||||||||||||||||||| | | |||||||     
T  13302742 tggagttatggaattaaatggatttttgctg-aaactgtgttctgcccgtagagcagatcgtcatcgctcgccatagcgagtaactgctattgcctcgca 13302644  T
Q  201 ggtgatcatcttcatcgct 219  Q
     ||||||||||||||||||    
T  13302643 agtgatcatcttcatcgct 13302625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 227 - 439
Target Start/End: Complemental strand, 13302272 - 13302060
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||| ||||  ||||| ||||| |||||||| |||||| |||  ||| ||||||||| |||||||| |||||||||||| | |||    
T  13302272 agttactcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacttgattttctgagttggtctttggggtatgaatggaagttgattata 13302173  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    | | ||| ||  |  ||||||||||||||||||||| | ||| |||||  |||||| ||||  |||||||||||| | ||||||||||||||||||||||    
T  13302172 aatgtatagtctttcagtgagtctgaattaatatgattgttgttgttgtttaatttgagatctatatattatgtggaaattgtatgatatagaaatattg 13302073  T
Q  427 atgtccatctcat 439  Q
     ||| ||| ||||    
T  13302072 ttgttcatatcat 13302060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 45755447 - 45755244
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| ||| || ||||||||||||||||||||||| |||| ||||  |||| ||||||||||||||||||||||||||| |||||||   ||||    
T  45755447 ttaagagtaggaatttgttgaattgatgtagaaatagtgtccagactttagactattaatagaacaatgattagaatcagttttacggttagaaccatgg 45755348  T
Q  114 aattaggtgagtcttgttgaaaa-ctgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatct 211  Q
    | ||  |||||| ||   ||||| |||||||||||||   || |||||||||||||||||||||| |||||| ||| |||||||| ||| ||||| | ||    
T  45755347 atttgagtgagtttttgagaaaatctgcattctgccc---gagctgacattcatcgctcgccataacgagtagctgatctcgcctagcgagtgatgaact 45755251  T
Q  212 tcatcgc 218  Q
    |||||||    
T  45755250 tcatcgc 45755244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7320706 - 7320814
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||| |||||  ||||||||| |||||||||| |||||||||||||||||||||| |    
T  7320706 gtaattggttgatttaatagtagaaatttgttgaattgatgtagaaacagtgttcagaccttagattattcatagtacaatgattagaatcagttttagg 7320805  T
Q  101 gttagagtt 109  Q
    ||| |||||    
T  7320806 gtttgagtt 7320814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 24727309 - 24727124
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| |||||| | ||||||||||||| ||||||| |||||||||  |||||||||||||||||||||| |||||||||| || |||   || |    
T  24727309 ttaagagtaggaatctgttaaattgatgtagaattagtgtccagaccttagactattcatagaacaatgattagagtcagttttaaagtcagaaccattg 24727210  T
Q  114 aattaggtgagtcttgttgaaaactgc-attctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    |||| | ||||| |||   |||  ||| |||||||||   || ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  24727209 aatttgatgagttttgagaaaatttgcaattctgccc---gagctgacattcattgctcgccatagcgagtaactgatctcgcctcgcg 24727124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 219
Target Start/End: Complemental strand, 42697690 - 42697506
Alignment:
Q  34 aattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatggaattaggtgagtcttgttga 133  Q
    ||||||||||||| ||||||| | |||||||  |||||||| |||||||||||||||||||||||  ||||||   ||| |||| | ||||| ||   ||    
T  42697690 aattgatgtagaattagtgtccataccttagactattcataaaacaatgattagaatcagttttatagttagaaccatgaaattggatgagtttttgaga 42697591  T
Q  134 aaa-ctgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatcttcatcgct 219  Q
    ||| ||||||||| |||   || |||||||||||||||| || ||||||||||||| |||||||||||| ||||| | ||||||||||    
T  42697590 aaatctgcattctaccc---gagctgacattcatcgctccccttagcgagtaactgatctcgcctcgcgagtgatgaacttcatcgct 42697506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 51336405 - 51336334
Alignment:
Q  35 attgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||| |||||||||||||| ||||||||    
T  51336405 attgatgtagaaatagtgtccagaccttagactattcatagaacaatgtttagaatcagttttgaggttaga 51336334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 14238306 - 14238369
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14238306 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 14238369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 51082574 - 51082511
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  51082574 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 51082511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 38887818 - 38887884
Alignment:
Q  357 atatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    |||||||| ||| ||||| ||||||| || |||||||||||||||||||||||||||||||||||||    
T  38887818 atatgaatgttgttgttgaataatttgaggtacatatattatgtgaatattgtatgatatagaaata 38887884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 7052749 - 7052812
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| |||||||||||||| |||||||||||||||||||||||||    
T  7052749 tgaatgttgttgttgaataatttgagatacatatattaggtgaatattgtatgatatagaaata 7052812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 12327889 - 12327960
Alignment:
Q  35 attgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    ||||||||||||||||| || |||||||||  |||||| ||||||||| |||||||||||||| ||||||||    
T  12327889 attgatgtagaaatagtatccagaccttagactattcagagaacaatgtttagaatcagttttgaggttaga 12327960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 45754941 - 45754850
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    |||||| ||||||||||||||||||||  ||||| |||||||| ||||| |||| |||  |||||| | |||||| |||||||||||||||||    
T  45754941 tactcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcatgtgatgttgtgagttgat-cttgggataggaatggaagttgtt 45754850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 42697179 - 42697105
Alignment:
Q  253 ttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||| ||||| |||||||||| |||||| | |||  |||||| |||||||||||||||||||||||||| ||||    
T  42697179 ttagtgttcttgcgatcttttttgcacgttatgttatgagttgatccttggggtaggaatggaagttgtttataa 42697105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 21239949 - 21240014
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    ||||||||  ||||||||||||| | ||||||||||||||||||| ||||||| | ||||||||||    
T  21239949 tgaatatttttgttggataatttgaaatacatatattatgtgaatgttgtatgttgtagaaatatt 21240014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 51323663 - 51323594
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| | |||||||||||||||||||  |||||| | ||||||||||||||| ||| ||||    
T  51323663 tgttggataatttgaaatacatatattatgtgaatgatgtatgttgtagaaatattgatgttcatatcat 51323594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 7321491 - 7321554
Alignment:
Q  349 ctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatg 412  Q
    ||||||||||||||||||||  ||| ||||| || | |||||||||||||||||||||| ||||    
T  7321491 ctgaattaatatgaatattgtcgttagataaattgaaatacatatattatgtgaatattatatg 7321554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 421
Target Start/End: Complemental strand, 52983568 - 52983437
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatac 389  Q
    ||||||||||||||||||||||||||||||||| ||||   ||| | | |  | ||| ||| |  |||||| | |  || |||||| ||||||||| |||    
T  52983568 gagttggtccttggggtaggaatggaagttgtttataaaggtatagcttttcactgaatctaagctaatataattgatgttgttggttaatttaagctac 52983469  T
Q  390 atatattatgtgaatattgtatgatatagaaa 421  Q
    |||||||||||| | | |||||||||||||||    
T  52983468 atatattatgtggaaaatgtatgatatagaaa 52983437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 13528419 - 13528456
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  13528419 gagttggtccttggggtaggaatggaagttgtttataa 13528456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 419
Target Start/End: Complemental strand, 51476347 - 51476270
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatataga 419  Q
    ||||| ||| || |||||||| || || |||||| ||||||||| ||||||||||||||| | | |||||||||||||    
T  51476347 agtgaatctaaactaatatgattaatgttgttggttaatttaagctacatatattatgtggaaaatgtatgatataga 51476270  T

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Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 409
Target Start/End: Original strand, 4596509 - 4596548
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgt 409  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  4596509 tgttggataatttgaaatacatatattatgtgaatattgt 4596548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 12328432 - 12328517
Alignment:
Q  237 tggcagtcaaccttgtttagttttcttacgatctttt-tcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    |||||| ||||||||||||| |||||| ||||||||| |||||||||| |||  |||| |  |||||||||| |||| |||||||||    
T  12328432 tggcagacaaccttgtttaggtttcttgcgatcttttgtcgcacgtgatgttatgagtcgacccttggggtatgaat-gaagttgtt 12328517  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 22124583 - 22124517
Alignment:
Q  247 ccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatg 313  Q
    ||||||||||  ||||| ||||| || |||||||||| |||  |||||| |||||||||||||||||    
T  22124583 ccttgtttagggttcttgcgatccttgtcgcacgtgaggttatgagttgatccttggggtaggaatg 22124517  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8276102 - 8276139
Alignment:
Q  1 gtaattggttgatttaagagtaga-aatctgatgaatt 37  Q
    |||||||||||||||||||||||| |||||||||||||    
T  8276102 gtaattggttgatttaagagtagataatctgatgaatt 8276139  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38056785 - 38056822
Alignment:
Q  1 gtaattggttgatttaagagtaga-aatctgatgaatt 37  Q
    |||||||||||||||||||||||| |||||||||||||    
T  38056785 gtaattggttgatttaagagtagataatctgatgaatt 38056822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 51476901 - 51476836
Alignment:
Q  32 tgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    |||||| ||| ||||| |||||  ||||||||| || ||||||| ||||||||||||| |||||||    
T  51476901 tgaattaatgaagaaacagtgttaagaccttagattgttcatagtacaatgattagaaccagtttt 51476836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 322
Target Start/End: Complemental strand, 18824029 - 18823997
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgtt 322  Q
    |||||||||||| ||||||||||||||||||||    
T  18824029 gagttggtccttagggtaggaatggaagttgtt 18823997  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 332
Target Start/End: Complemental strand, 51327105 - 51327010
Alignment:
Q  237 tggcagtcaaccttgtttagttttcttacgatctttt-tcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattata 332  Q
    |||||| ||||||||||||| |||||| | ||||||| |||||||||| |||  |||| |  |||||||||||| || ||||||||| || ||||||    
T  51327105 tggcagacaaccttgtttaggtttcttgcaatcttttgtcgcacgtgatgttatgagtcgacccttggggtagggat-gaagttgttaatgattata 51327010  T

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Target: scaffold0010 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 126429 - 126633
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| || ||  ||||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||||||||  ||||     
T  126429 ttaagagtaggaacctattgaattgatgtagaaatagtgtccagaccttagactattcatagaacaatgattataatcagttttaaggttagaactatgt 126528  T
Q  114 aattaggtgagtcttgttgaaaa-ctgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatct 211  Q
    |||| ||||||| ||   ||||| || ||||||||||   || ||||||||||||||||||| |||||||||  || |||||||||||| ||||| | ||    
T  126529 aattgggtgagtttttgagaaaatctacattctgccc---gagctgacattcatcgctcgccttagcgagtagttgatctcgcctcgcgagtgatgaact 126625  T
Q  212 tcatcgct 219  Q
    ||||||||    
T  126626 tcatcgct 126633  T

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Target: scaffold0010; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 127022 - 127084
Alignment:
Q  265 cgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataa 327  Q
    |||||||| |||||||||| |||  ||||||||||||| ||||||||||||||||||| ||||    
T  127022 cgatctttgtcgcacgtgatgttatgagttggtccttgcggtaggaatggaagttgtttataa 127084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 32466321 - 32466525
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    ||||||||||||| ||| | ||||||||||||| ||||||| |||||||||  |||||||||||||||||||||||| |||||||||||||||   || |    
T  32466321 ttaagagtagaaacctgttaaattgatgtagaattagtgtccagaccttagactattcatagaacaatgattagaataagttttaaggttagaaccattg 32466420  T
Q  114 aattaggtgagtcttgttgaaaactgc-attctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatct 211  Q
    |||| | ||||| |||   ||| | || |||||||||   || ||||||||||||||||||||||||||||||||| |||| ||||||| ||||| | ||    
T  32466421 aattggatgagttttgagaaaatcagcaattctgccc---gagctgacattcatcgctcgccatagcgagtaactgatctcacctcgcgagtgatgaact 32466517  T
Q  212 tcatcgct 219  Q
    ||||||||    
T  32466518 tcatcgct 32466525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 342 - 425
Target Start/End: Complemental strand, 14630052 - 14629969
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14630052 agtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatatt 14629969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 15613013 - 15612815
Alignment:
Q  19 agtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatggaatta 118  Q
    |||||||| ||| | ||||||||||||| ||||||  |||||||||  ||||||||||||||||||||  ||||||||||||||||||   ||||||||     
T  15613013 agtagaaacctgttaaattgatgtagaattagtgttcagaccttagactattcatagaacaatgattatgatcagttttaaggttagaaccatggaattg 15612914  T
Q  119 ggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatcttcatcg 217  Q
    | ||||| |||   ||| ||||||||||||    || ||||||||||||||||||||||||||||| |||| ||| ||||||| ||||| | ||||||||    
T  15612913 gatgagttttgagaaaatctgcattctgcc---tgagctgacattcatcgctcgccatagcgagtagctgtcctcccctcgcgagtgatgaacttcatcg 15612817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 342 - 439
Target Start/End: Original strand, 16026770 - 16026867
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||    
T  16026770 agtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtgtgatatagaaatattgttgttcatatcat 16026867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 344 - 439
Target Start/End: Complemental strand, 9638185 - 9638090
Alignment:
Q  344 tgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  9638185 tgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 9638090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 21062567 - 21062385
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    ||||| |||| || ||| ||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||| ||| |||||||||||   ||||    
T  21062567 ttaagggtaggaacctgttgaattgatgtagaaatagtgtccagaccttagactattcatagaacaatgattagaattagtgttaaggttagaaccatgg 21062468  T
Q  114 aattaggtgag-tcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctc 198  Q
    | || |||||| | |||   ||||||||||||| |||||    |||||||||||| |||||| ||||||||| || ||||||||||    
T  21062467 atttgggtgagtttttgagaaaaactgcattcttcccgt---gctgacattcatcactcgccttagcgagtagctattctcgcctc 21062385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 36 - 219
Target Start/End: Complemental strand, 51993466 - 51993284
Alignment:
Q  36 ttgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatggaattaggtgagtcttgttgaaa 135  Q
    ||||||||||| ||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| |   || ||||| | ||||| |||   |||    
T  51993466 ttgatgtagaattagtgtccagaccttagactattcatagaacaatgattagaatcagttttaaggttaaaaccattgaattggatgagttttgagaaaa 51993367  T
Q  136 actgc-attctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatcttcatcgct 219  Q
     | || |||||||||   || ||||||||||||||||||||||||||| |   | |||||||||||| ||||| | ||||||||||    
T  51993366 tcggcaattctgccc---gagctgacattcatcgctcgccatagcgagcagacgatctcgcctcgcgagtgatgaacttcatcgct 51993284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 53631137 - 53631206
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  53631137 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 53631206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 369 - 439
Target Start/End: Original strand, 16026619 - 16026689
Alignment:
Q  369 atgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  16026619 atgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 16026689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 3485269 - 3485206
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3485269 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 3485206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 21062009 - 21061917
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    |||||| ||||||||| ||||||||||  || ||||||||||| |||||| ||| |||  ||||||||| ||||||||||| |||||||||||    
T  21062009 tactcagtggcagtcagccttgtttaggattattacgatctttgtcgcacatgatgttatgagttggtctttggggtaggagtggaagttgtt 21061917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 35811520 - 35811592
Alignment:
Q  34 aattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    ||||||||||||||||||||| | |||||||  |||||||||||||| | |||||||||||||| ||||||||    
T  35811520 aattgatgtagaaatagtgtccataccttagaatattcatagaacaaagtttagaatcagttttgaggttaga 35811592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 19734644 - 19734587
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatata 417  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  19734644 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatata 19734587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 21122 - 21046
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaat 90  Q
    |||||||||| || ||| | ||||||||||||| ||||| | |||||||||  ||||||||||||||||||||||||    
T  21122 ttaagagtaggaacctgttaaattgatgtagaattagtgaccagaccttagactattcatagaacaatgattagaat 21046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 50160480 - 50160346
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||| ||||||||||||  || |  |||||||| ||||||| || |||  ||||||||||||||||||||||||  ||||||| ||     
T  50160480 agttactcattggcagt-aaccttgtttagggttttggcgatctttgtcgcacgagatgttatgagttggtccttggggtaggaatgatagttgtttatg 50160382  T
Q  327 attatattgttgtgtagtgagtctgaattaatatga 362  Q
    ||  || ||||||  || ||||||||||||| ||||    
T  50160381 atattaatgttgttcagagagtctgaattaagatga 50160346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 13036441 - 13036510
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||| | ||||||||||| ||| ||| ||||    
T  13036441 tgttggataatttaaaatacatatattatgtgaatgttgaatgttgtagaaatattgttgttcatatcat 13036510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 26050295 - 26050413
Alignment:
Q  244 caaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtag 343  Q
    |||||||||||||  ||||| |||||||| |||||| ||| |||  |||||| |||||||| |||||||||| |||| | |||||  ||||| |||  |     
T  26050295 caaccttgtttagggttcttgcgatctttgtcgcacatgaggttttgagttgatccttgggttaggaatggaggttgattataatattattgatgttcaa 26050394  T
Q  344 tgagtctgaattaatatga 362  Q
    |||||||||  ||||||||    
T  26050395 tgagtctgatataatatga 26050413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 14630214 - 14630145
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| | ||||||||||||||||||| || |||| | ||||||||||| ||| ||| ||||    
T  14630214 tgttggataatttgaaatacatatattatgtgaatgttatatgttgtagaaatattgttgttcatatcat 14630145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 14933070 - 14933107
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  14933070 gagttggtccttggggtaggaatggaagttgtttataa 14933107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 14942275 - 14942312
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  14942275 gagttggtccttggggtaggaatggaagttgtttataa 14942312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 360 - 421
Target Start/End: Original strand, 33243950 - 33244011
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
    ||||||||  ||||| ||||||| ||||||||||||| ||||||||  ||||||||||||||    
T  33243950 tgaatatttttgttgaataatttgagatacatatattgtgtgaataaggtatgatatagaaa 33244011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 21000 - 20936
Alignment:
Q  156 ctgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatcttcatcgct 219  Q
    ||||||||||||||||||| |||||||||  ||| ||||||||||| ||||| | ||||||||||    
T  21000 ctgacattcatcgctcgccttagcgagtagttgtcctcgcctcgcgagtgatgaacttcatcgct 20936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 9870578 - 9870654
Alignment:
Q  21 tagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    |||||| ||| |||||| ||| ||||| |||||  ||||||||  |||||||||| ||||||||||||| |||||||    
T  9870578 tagaaacctgttgaattaatgaagaaacagtgttcagaccttatattattcatagtacaatgattagaaccagtttt 9870654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 51993004 - 51992914
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    |||||| ||||||||| ||||||||||  |||||  ||||||| |||||||||| |||  |||||| || ||||| |||||||||||||||||    
T  51993004 tactcagtggcagtca-ccttgtttagggttcttgtgatctttgtcgcacgtgatgttgtgagttgatc-ttgggttaggaatggaagttgtt 51992914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 4615695 - 4615732
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  4615695 gagttggtctttggggtaggaatggaagttgtttataa 4615732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9638949 - 9638912
Alignment:
Q  1 gtaattggttgatttaagagtaga-aatctgatgaatt 37  Q
    |||||||||||||||||||||||| |||||||||||||    
T  9638949 gtaattggttgatttaagagtagataatctgatgaatt 9638912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 20899389 - 20899426
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  20899389 gagttggtccttggggtaggaatgaaagttgtttataa 20899426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 22354587 - 22354522
Alignment:
Q  32 tgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    |||||| ||| |||||||||||  | ||||||| || ||||||| ||||||||||||| |||||||    
T  22354587 tgaattaatgaagaaatagtgttcataccttagattgttcatagtacaatgattagaaccagtttt 22354522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 19609721 - 19609673
Alignment:
Q  361 gaatattgatgttggataatttaagatacatatattatgtgaatattgt 409  Q
    |||||||  ||||||||||||| | ||||||||||||||||||| ||||    
T  19609721 gaatatttttgttggataatttgaaatacatatattatgtgaatgttgt 19609673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 27028156 - 27028128
Alignment:
Q  292 gttggtccttggggtaggaatggaagttg 320  Q
    |||||||||||||||||||||||||||||    
T  27028156 gttggtccttggggtaggaatggaagttg 27028128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 8581 - 8430
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||  ||||  ||||||||| |||||||||| ||||||| |||||||||||||| |    
T  8581 gtaattggttgatttaatagtagaaatctgttgaattgatgtagaaacggtgttcagaccttagattattcatagtacaatgactagaatcagttttagg 8482  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgta 152  Q
    ||||||| ||||||||| || |||| ||| ||||  |||  |||||||||||    
T  8481 gttagagatatggaattgggagagttttgctgaattctgtgttctgcccgta 8430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 18262 - 18142
Alignment:
Q  285 gttccgagttggtccttggggtaggaatggaagttgttcataattatattgttgt-gtagtgagtctgaattaatatgaatattgatgttggataattta 383  Q
    |||| ||||||||| |||||||||  ||| ||||||   |||| |||||| || | |||||||  ||||||||||||||||||||  ||||||||| ||     
T  18262 gttctgagttggtctttggggtagagatgaaagttgcatataactatattttttttgtagtgaacctgaattaatatgaatattgtcgttggataacttg 18163  T
Q  384 agatacatatattatgtgaat 404  Q
    | |||| |||||||| |||||    
T  18162 aaatacttatattatatgaat 18142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 4867 - 4682
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    ||||||| ||||| ||| | ||||||||||||| ||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||   || |    
T  4867 ttaagaggagaaacctgttaaattgatgtagaattagtgtccagaccttagactattcatagaacaatgattagaatcagttttaaggttagaaccattg 4768  T
Q  114 aattaggtgagtcttgttgaaaactgc-attctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    |||| | ||||| |||   |||  ||| ||| |||||   || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  4767 aattggatgagttttgagaaaatatgcaattatgccc---gagctgacattcatcgctcgccatagcgagtaactgatctcgcctcgcg 4682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 342 - 425
Target Start/End: Complemental strand, 937 - 854
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  937 agtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatatt 854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 1099 - 1030
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| | ||||||||||||||||||| || |||| | ||||||||||| ||| ||| ||||    
T  1099 tgttggataatttgaaatacatatattatgtgaatgttatatgttgtagaaatattgttgttcatatcat 1030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 342 - 425
Target Start/End: Original strand, 187331 - 187414
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  187331 agtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatatt 187414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 187169 - 187238
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| | ||||||||||||||||||| || |||| | ||||||||||| ||| ||| ||||    
T  187169 tgttggataatttgaaatacatatattatgtgaatgttatatgttgtagaaatattgttgttcatatcat 187238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 71; Significance: 5e-32; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 29314 - 29112
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    |||||||||| ||  || |||||||||||||||||| ||||||||||||||  |  |||||||||||||||||||||||||||||||||||||   ||||    
T  29314 ttaagagtaggaacatgttgaattgatgtagaaataatgtctagaccttagact--tcatagaacaatgattagaatcagttttaaggttagaaccatgg 29217  T
Q  114 aattaggtgagtcttgttgaaaa-ctgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatct 211  Q
    |||| ||||||| ||   ||||| |||||||||||||   || ||||||||||||||||||| |||||| || ||| ||||| ||| || ||||| | ||    
T  29216 aattgggtgagtttttgagaaaatctgcattctgccc---gagctgacattcatcgctcgccttagcgaatagctgatctcgtctcacgagtgatgaact 29120  T
Q  212 tcatcgct 219  Q
    ||||||||    
T  29119 tcatcgct 29112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 327
Target Start/End: Complemental strand, 28751 - 28662
Alignment:
Q  237 tggcagtcaaccttgtttagttttcttacgatctttttcgcacg-tgacgttccgagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||||||||  ||||| |||||||| ||||| | ||||  |  ||||||||| ||||||||||||||||||||||| ||||    
T  28751 tggcagtcaaccttgtttagggttcttgcgatctttatcgcatgatgacaat--gagttggtctttggggtaggaatggaagttgtttataa 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 47195 - 47241
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattatattgt 336  Q
    |||||||||||||||||||||| | |||||||| || ||||||||||    
T  47195 gagttggtccttggggtaggaaagaaagttgttgatgattatattgt 47241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 237 - 421
Target Start/End: Complemental strand, 702 - 519
Alignment:
Q  237 tggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgt 336  Q
    ||||||| ||||||||||||  ||||| |||||||| |||||||||| |||| ||||||||| ||||| || ||||| |||||||| ||||||||| |||    
T  702 tggcagttaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttctgagttggtctttgggataagaatgaaagttgtttataattatactgt 603  T
Q  337 tgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
     ||  ||||||| |||||||| |||| || || ||||||  ||||| || ||||||||||||||| | | |||||||||||||||    
T  602 ggttcagtgagtttgaattaa-atgattaatgttgttggtaaatttgagctacatatattatgtggaaaatgtatgatatagaaa 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 237 - 421
Target Start/End: Complemental strand, 8957 - 8774
Alignment:
Q  237 tggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgt 336  Q
    ||||||| ||||||||||||  ||||| |||||||| |||||||||| |||| ||||||||| ||||| || ||||| |||||||| ||||||||| |||    
T  8957 tggcagttaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttctgagttggtctttgggataagaatgaaagttgtttataattatactgt 8858  T
Q  337 tgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
     ||  ||||||| |||||||| |||| || || ||||||  ||||| || ||||||||||||||| | | |||||||||||||||    
T  8857 ggttcagtgagtttgaattaa-atgattaatgttgttggtaaatttgagctacatatattatgtggaaaatgtatgatatagaaa 8774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 69; Significance: 8e-31; HSPs: 4)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 319 - 439
Target Start/End: Complemental strand, 1784 - 1664
Alignment:
Q  319 tgttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatag 418  Q
    |||| |||||| ||||||  | |||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  1784 tgtttataattgtattgtcttttagtgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatactatgtgaatattgtatgatatag 1685  T
Q  419 aaatattgatgtccatctcat 439  Q
    |||||||| ||| ||| ||||    
T  1684 aaatattgttgttcatatcat 1664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 342 - 426
Target Start/End: Complemental strand, 4914 - 4830
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||||||||||||||||||||||| ||| |||||  |||||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  4914 agtgagtctgaattaatatgaatgttgttgttgattaatttgagatacatatattatgtgaatattgtataatatataaatattg 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 369 - 439
Target Start/End: Complemental strand, 5077 - 5007
Alignment:
Q  369 atgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  5077 atgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 5007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 369 - 439
Target Start/End: Complemental strand, 1924 - 1854
Alignment:
Q  369 atgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||    
T  1924 atgttgaataatttgagatacatatattgtgtgaatattgtatgatatagaaatattgttgttcatatcat 1854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 5876 - 5690
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatgg 113  Q
    ||||||||||||| ||| | ||||||||||||| ||||||| |||||||||  |||||||| | |||||||||||||||||||||||||||||   || |    
T  5876 ttaagagtagaaacctgttaaattgatgtagaattagtgtccagaccttagactattcatatagcaatgattagaatcagttttaaggttagaaccattg 5777  T
Q  114 aattaggtgagtcttgttgaaaa-ctgc-attctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    |||| | ||||| |||   |||| |||| |||||||||   ||  ||||||| |||||||||||||||||||||||| ||||||||||||    
T  5776 aattggatgagttttgagaaaaatctgcaattctgccc---gagttgacattaatcgctcgccatagcgagtaactgatctcgcctcgcg 5690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 33708 - 33645
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33708 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 33645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 3189 - 3105
Alignment:
Q  237 tggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    ||||||||||||||||||||  ||||| |||||||| |||||| ||| |||  ||||| | ||||||| ||| |||||||||||||    
T  3189 tggcagtcaaccttgtttagggttcttgcgatctttgtcgcacatgatgttgtgagtt-gaccttgggatagaaatggaagttgtt 3105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 201
Target Start/End: Complemental strand, 4291 - 4126
Alignment:
Q  34 aattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatggaattaggtgagtcttgttga 133  Q
    ||||||||||||| || |||| |||||||||  |||||||| |||||||||||||||||||||||| ||||||   |||||||| | ||||| ||   ||    
T  4291 aattgatgtagaattaatgtccagaccttagactattcataaaacaatgattagaatcagttttaatgttagaaccatggaattggatgagtttttgaga 4192  T
Q  134 aaa-ctgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    ||| |||||||||||||   || |||||||||||| |||||||||||||||| ||| ||||||||||||    
T  4191 aaatctgcattctgccc---gagctgacattcatcactcgccatagcgagtagctgatctcgcctcgcg 4126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 283
Target Start/End: Complemental strand, 3754 - 3701
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtga 283  Q
    |||||| ||||||||||||||||||||  ||||| | |||||| ||||||||||    
T  3754 tactcagtggcagtcaaccttgtttaggattcttgcaatctttgtcgcacgtga 3701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 421
Target Start/End: Original strand, 127365 - 127555
Alignment:
Q  231 actcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataatta 330  Q
    ||||| ||||||||| ||||  ||||| ||||| |||||||| |||||||| | |||  ||||||||||||||| |||||||| |||||||| ||||       
T  127365 actcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacgtaatgttatgagttggtccttgggataggaatgaaagttgtttataaagg 127464  T
Q  331 tattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
    ||| |   |  ||||||||| ||||||||||| ||||| |||||| |||||| || ||||||||||||||||| | |||||||||||||||    
T  127465 tatagcctttcagtgagtctaaattaatatgattattgttgttggttaatttgagctacatatattatgtgaaaaatgtatgatatagaaa 127555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 201
Target Start/End: Complemental strand, 398468 - 398303
Alignment:
Q  34 aattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatggaattaggtgagtcttgttga 133  Q
    ||||||||||||| ||||||| | |||||||  |||||||||||| ||||||||||||||||||||||||||||| || ||||| | ||||| |||   |    
T  398468 aattgatgtagaattagtgtccaaaccttagactattcatagaacgatgattagaatcagttttaaggttagagtcattgaattggatgagttttgagaa 398369  T
Q  134 aaactgc-attctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    || |||| |||||||||   || |||||||||||||||||||||||| |||| ||  ||||||||||||    
T  398368 aatctgcaattctgccc---gagctgacattcatcgctcgccatagcaagtagcttgtctcgcctcgcg 398303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 66; Significance: 5e-29; HSPs: 3)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 342 - 439
Target Start/End: Complemental strand, 7713 - 7616
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||||||||||||| ||| ||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  7713 agtgagtctgaattaatatgaatgttgttgttgaataattcgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 7616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 439
Target Start/End: Complemental strand, 7870 - 7807
Alignment:
Q  376 ataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||| ||| ||||    
T  7870 ataatttgatatacatatattatttgaatattgtatgatatagaaatattgttgttcatatcat 7807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 4085 - 4002
Alignment:
Q  23 gaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    |||| ||| ||||||||||||||||| ||||  | ||||||| | |||||||| |  ||| |||||||||||| ||||||||||    
T  4085 gaaaactgttgaattgatgtagaaattgtgtacaaaccttagataattcataggatgatgtttagaatcagttctaaggttaga 4002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 439
Target Start/End: Complemental strand, 4166 - 3954
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| | || |||| |||||||| || ||||| ||  |||| |||| ||||  |||| ||||||||| |||||||||||||| |||||| | |||    
T  4166 agttactcaatcgctgtcagccttgtttggtgttcttgcgtcctttgtcgcgcgtgtagttctgagttggtc-ttggggtaggaatgaaagttgcttata 4068  T
Q  327 attatattgttgtgtagtgagtctgaat-taatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    ||| | |||   || |||||||| |||  |||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| | |||| |||||    
T  4067 attgtgttgccttgcagtgagtcagaaagtaatatgaatattgttgttggataatttgaaatacatatattatgtgaatattgtatgttgtagagatatt 3968  T
Q  426 gatgtccatctcat 439  Q
    | ||| ||| ||||    
T  3967 gttgttcatatcat 3954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 4622 - 4440
Alignment:
Q  1 gtaattggttgatttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaag 100  Q
    |||||| |||| ||||| |||  ||||||| ||||||||||||||| ||||||  ||||||||| ||||||||||   |||| ||| ||||||||||| |    
T  4622 gtaattagttggtttaatagtgaaaatctgttgaattgatgtagaattagtgttcagaccttagattattcatagtgtaatgtttataatcagttttagg 4523  T
Q  101 gttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagt 183  Q
    ||| ||| ||||||||| || |||| ||| ||||| |||  |||||||| |||| |  |   |||||||||||||||||||||    
T  4522 gtttgagatatggaatttggagagttttgctgaaatctgtgttctgcccatagaccaaatcgtcatcgctcgccatagcgagt 4440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 342 - 425
Target Start/End: Complemental strand, 16974 - 16891
Alignment:
Q  342 agtgagtctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatatt 425  Q
    |||||||| |||||||||||| ||||| ||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  16974 agtgagtcggaattaatatgattattgttgttggataatttgagatacatatattatgtgaaaattgtttgatatagaaatatt 16891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 3285 - 3243
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattata 332  Q
    ||||||||||||||||| ||||||||||||||| || ||||||    
T  3285 gagttggtccttggggttggaatggaagttgttaatgattata 3243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 197
Target Start/End: Complemental strand, 19881 - 19695
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggtta-----ttcatagaacaatgattagaatcagttttaaggttagagt 108  Q
    |||||||||| ||  || ||||||||||||||||||||||| ||||||||  |||     ||| ||||||||||||||||||||||||||||||||||      
T  19881 ttaagagtaggaacttgttgaattgatgtagaaatagtgtccagaccttaccttagactattcgtagaacaatgattagaatcagttttaaggttagaac 19782  T
Q  109 tatggaattaggtgag-tcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcct 197  Q
     |||| ||| |||||| | ||| | |||| ||||||||||||   || ||||||||||||||||||| ||||||||| ||| || |||||    
T  19781 catgggattgggtgagtttttgataaaaattgcattctgccc---gagctgacattcatcgctcgccgtagcgagtagctgatcccgcct 19695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13888 - 13850
Alignment:
Q  1 gtaattggttgatttaagagtaga-aatctgatgaattg 38  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  13888 gtaattggttgatttaagagtagataatctgatgaattg 13850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 96314 - 96233
Alignment:
Q  25 aatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    |||||| |||||||||||||||||| |||| |||||||||  |||||||||||| |||||||||||||||||||||||||||    
T  96314 aatctgttgaattgatgtagaaataatgtccagaccttagactattcatagaaccatgattagaatcagttttaaggttaga 96233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 95771 - 95676
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    ||||||||| ||||||||||||||||||||  ||||| ||||| || ||||||||||  ||  ||||||||| ||||| |||||||  ||||||||    
T  95771 agttactcagtggcagtcaaccttgtttagggttcttgcgatcattgtcgcacgtgagcttatgagttggtctttgggataggaatcaaagttgtt 95676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 421
Target Start/End: Complemental strand, 19166 - 19004
Alignment:
Q  259 ttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaat 358  Q
    ||||| || ||||||||||||||| ||||| ||||||||| |||||||||||||  ||||||   |||| | || |||| | ||||||  ||||||||||    
T  19166 ttcttgcgttctttttcgcacgtgtcgttctgagttggtctttggggtaggaatcaaagttgcatataaatgtactgttttatagtgaacctgaattaat 19067  T
Q  359 atgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
    ||||||||||  ||||||||| || | || | ||||||||||| |||||||||| | ||||||    
T  19066 atgaatattgtggttggataaattgaaatgcgtatattatgtggatattgtatgttgtagaaa 19004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 1131 - 1200
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  1131 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 52673 - 52762
Alignment:
Q  17 agagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    |||||||||| ||| | |||||||||| || ||||||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  52673 agagtagaaacctgttaaattgatgtaaaattagtgtccagaccttagactattcatagaacaatgattagaatcagttttaaagttaga 52762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 55850 - 55710
Alignment:
Q  32 tgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatggaattaggtgagtcttgtt 131  Q
    ||||||||||||||||| ||||  | ||||||| | || ||||| |  || |||||||||  |||||||||||||  ||||  ||||| ||||| ||||     
T  55850 tgaattgatgtagaaattgtgtacaaaccttagataatccataggatgataattagaatcgattttaaggttagaactatgagattagatgagttttgtg 55751  T
Q  132 gaaaactgc-attctgcccgtagaactgacattcatcgctcgcc 174  Q
     ||| |||| |||||||||   || |||||||||||||||||||    
T  55750 aaaatctgcaattctgccc---gagctgacattcatcgctcgcc 55710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 15250 - 15319
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  15250 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 24308 - 24377
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  24308 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 24377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 290 - 426
Target Start/End: Original strand, 89 - 225
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatac 389  Q
    ||||||||| |||||||||||  | || ||||  |||||| ||||||  |  ||||||||||||||||||||||||||| |||||||||| || | ||||    
T  89 gagttggtctttggggtaggatcgaaaattgtatataattgtattgtcttacagtgagtctgaattaatatgaatattgttgttggataaatttaaatac 188  T
Q  390 atatattatgtgaatattgtatgatatagaaatattg 426  Q
    || ||||||||| | |||||||| | |||||||||||    
T  189 atctattatgtggaaattgtatgttgtagaaatattg 225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 421
Target Start/End: Original strand, 2498 - 2693
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcata 326  Q
    ||||||||| ||||||||| ||||  ||||  ||||| |||||||| ||||| |||| ||| ||||||||||  | ||||| |||||||||||||| |||    
T  2498 agttactcagtggcagtcagccttacttagagttcttgcgatctttgtcgcatgtgatgttacgagttggtctgtagggtatgaatggaagttgtttata 2597  T
Q  327 attatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataattta-agatacatatattatgtgaatattgtatgatatagaaa 421  Q
    |   ||| |   |  || ||||||||||||| || | || ||||||||| ||||||  |||||||||||||||||| | |||||||||||||||||    
T  2598 aaggtatagcctttcagagagtctgaattaaaatcattaatgatgttggttaattttgagatacatatattatgtggaaattgtatgatatagaaa 2693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 30503 - 30409
Alignment:
Q  227 agttactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgt 321  Q
    |||| |||| |||||| |||||||||||||  ||||| |||||||| |||||||||| |||  ||||||||| ||||||||||||||||||||||    
T  30503 agttgctcattggcagacaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttgtgagttggtctttggggtaggaatggaagttgt 30409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 80 - 219
Target Start/End: Complemental strand, 30970 - 30832
Alignment:
Q  80 atgattagaatcagttttaaggttagagttatggaattaggtgagtcttgttgaaaa-ctgcattctgcccgtagaactgacattcatcgctcgccatag 178  Q
    |||||||||||||||||||||||||||   |||||||| ||||| | ||   ||||| |||||||||||| |   | ||||||||||| ||||||||  |    
T  30970 atgattagaatcagttttaaggttagaaccatggaattgggtgaatttttgagaaaaactgcattctgcctg---agctgacattcattgctcgccacgg 30874  T
Q  179 cgagtaactgttctcgcctcgcg-gtgatcatcttcatcgct 219  Q
    |||||| |||||||||| ||||| ||||| ||||||||||||    
T  30873 cgagtagctgttctcgcttcgcgagtgatgatcttcatcgct 30832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 3807 - 3738
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  3807 tgttggataatttgaaatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcat 3738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 423
Target Start/End: Complemental strand, 11521 - 11455
Alignment:
Q  357 atatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    |||||||| ||| ||||| ||||||| || |||||||||||||||||||||||||||||||||||||    
T  11521 atatgaatgttgttgttgaataatttgaggtacatatattatgtgaatattgtatgatatagaaata 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 230 - 375
Target Start/End: Original strand, 11395 - 11540
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataatt 329  Q
    |||||| |||||| |||||||||||||  ||||| |||| ||| ||||||| || |||  ||||||||| ||||||||| |||| |||||||| |||||     
T  11395 tactcagtggcagacaaccttgtttaggattcttgcgatatttgtcgcacgagatgttatgagttggtctttggggtagaaatgaaagttgtttataata 11494  T
Q  330 atattgttgtgtagtgagtctgaattaatatgaatattgatgttgg 375  Q
     |||||||||  || ||||||||||||| |||| || || ||||||    
T  11495 ttattgttgttcagagagtctgaattaagatgattaatgttgttgg 11540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 10895 - 10978
Alignment:
Q  23 gaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttaga 106  Q
    |||| ||| ||||||||||||||||| ||||  ||||||||| | |||| ||| |   ||||||||||||||||||||||||||    
T  10895 gaaacctgttgaattgatgtagaaattgtgtacagaccttagataattcctaggatggtgattagaatcagttttaaggttaga 10978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 15203 - 15266
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15203 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 15266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 22416 - 22353
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22416 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 22353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 29516 - 29453
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29516 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 29453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 556 - 503
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  556 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 6901 - 6848
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6901 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 6848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 29958 - 29905
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29958 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 29905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 10639 - 10692
Alignment:
Q  376 ataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatg 429  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  10639 ataatttgagatacatatattatgtgaatattgtatgatatagaaataatgatg 10692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 21040 - 20987
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21040 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 20987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 34617 - 34561
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||    
T  34617 tgttggataatttgagatacatgtattatgtgaatattttatgatatagaaatattg 34561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 32730 - 32690
Alignment:
Q  131 tgaaaactgcattctgcccgtagaactgacattcatcgctcgcc 174  Q
    |||||||||||||||||||||||   ||||||||||||||||||    
T  32730 tgaaaactgcattctgcccgtag---tgacattcatcgctcgcc 32690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 11153 - 11090
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  11153 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgacatagaaata 11090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 7333 - 7270
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  7333 tgaatgttgttgttgaataatttgagatacataaattatgtgaatattgtatgatatggaaata 7270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 671 - 734
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  671 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgacatagaaata 734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 423
Target Start/End: Original strand, 5974 - 6037
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| ||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  5974 tgaatgttgttgttgaataatttgagatacataaattatgtgaatattgtatgatatggaaata 6037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 146091 - 146028
Alignment:
Q  360 tgaatattgatgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||| |||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  146091 tgaatgttgttgttgattaatttgagatacatatattatgtgaatattgtatgatatagaaata 146028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 375
Target Start/End: Complemental strand, 1302 - 1217
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttgg 375  Q
    |||||||||||||||||||||||| |||||||||| |||  |||||||||  || ||||||||||||| |||| || || ||||||    
T  1302 gagttggtccttggggtaggaatgaaagttgttcaaaatattattgttgttcagagagtctgaattaagatgattaatgttgttgg 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 1971 - 1805
Alignment:
Q  33 gaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagttttaaggttagagttatggaattaggtgagtcttgttg 132  Q
    |||||||||||||||  ||||  ||||||||| | ||||||||    ||||||||||| |||||||||||||||   |||| ||| ||||| | ||   |    
T  1971 gaattgatgtagaaactgtgtacagaccttagatgattcataggttgatgattagaattagttttaaggttagaaccatgggattgggtgaatttttgag 1872  T
Q  133 aaaa-ctgcattctgcccgtagaactgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg 201  Q
    |||| |||||||||||||   || |||||| ||||||||||||  |||||| | ||| ||||| ||||||    
T  1871 aaaatctgcattctgccc---gagctgacagtcatcgctcgcctcagcgagcagctggtctcggctcgcg 1805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 5990 - 6039
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatataga 419  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  5990 tgttgaataatttgagatacatatattatgtgaatattgtatgatataga 6039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 3658 - 3609
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatataga 419  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  3658 tgttgaataatttgagatacatatattatgtgaatattgtatgatataga 3609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 21456 - 21403
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||    
T  21456 tgttgaataatttgagatacatatattatgtgaatattttatgatatagaaata 21403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 78410 - 78357
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  78410 tgttgaataatttgagatacatatattatgtgaatattgtatggtatagaaata 78357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 60821 - 60745
Alignment:
Q  14 ttaagagtagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaat 90  Q
    |||||||||| || ||| | ||||||||||||| ||||| | |||||||||  ||||||||||||||||||||||||    
T  60821 ttaagagtaggaacctgttaaattgatgtagaattagtgaccagaccttagactattcatagaacaatgattagaat 60745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 60699 - 60635
Alignment:
Q  156 ctgacattcatcgctcgccatagcgagtaactgttctcgcctcgcg-gtgatcatcttcatcgct 219  Q
    ||||||||||||||||||| |||||||||  ||| ||||||||||| ||||| | ||||||||||    
T  60699 ctgacattcatcgctcgccttagcgagtagttgtcctcgcctcgcgagtgatgaacttcatcgct 60635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 168825 - 168769
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattg 426  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||||    
T  168825 tgttggataatttgaaatacatatattatgttaatattgtatgatattgaaatattg 168769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 12721 - 12838
Alignment:
Q  246 accttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtg 345  Q
    |||||||||||  ||||| | |||||| ||||||| || |||  ||||||||||||||||||||||||  ||||||| |||| |||||| |||| ||| |    
T  12721 accttgtttagggttcttgctatctttgtcgcacgagaggttatgagttggtccttggggtaggaatgagagttgtttataa-tatattattgtttagag 12819  T
Q  346 agtctgaattaatatgaat 364  Q
    || |||| |||| ||||||    
T  12820 agcctgatttaagatgaat 12838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 4123 - 4086
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  4123 gagttggtccttggggtaggaatggaagttgtttataa 4086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 15179 - 15117
Alignment:
Q  35 attgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaatcagtttt 97  Q
    |||||||||||||||||||| || ||||||  |||||||||||||||  ||||||||||||||    
T  15179 attgatgtagaaatagtgtccagtccttagactattcatagaacaattcttagaatcagtttt 15117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 14608 - 14538
Alignment:
Q  244 caaccttgtttagttttcttacgatctttt-tcgcacgtgacgttccgagttggtccttggggtaggaatg 313  Q
    ||||||||||||| |||||| ||||||||| |||||| ||| |||  |||||| ||||| |||||||||||    
T  14608 caaccttgtttaggtttcttgcgatcttttgtcgcacatgatgttatgagttgatccttagggtaggaatg 14538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 319
Target Start/End: Original strand, 572 - 660
Alignment:
Q  230 tactcactggcagtcaaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagtt 319  Q
    |||||| ||||||||||||||||||||  ||||| |||||||| |||||||||| |||  |||||| | |||||| |||||||| |||||    
T  572 tactcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgaagttgtgagttgat-cttgggataggaatgaaagtt 660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 25904 - 25835
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| | ||||||||||||||||||| ||||||| | ||||||||||| ||| ||| ||||    
T  25904 tgttggataatttgaaatacatatattatgtgaatgttgtatgttgtagaaatattgttgttcatatcat 25835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 421
Target Start/End: Complemental strand, 3458 - 3327
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatac 389  Q
    ||||||||| |||||||||||||| |||||||| ||||   ||| |   | |||||| ||| ||||||||| | |   | |||||| ||||||||| |||    
T  3458 gagttggtcgttggggtaggaatgaaagttgtttataaaggtatagccttttagtgaatctaaattaatataattgacgttgttggttaatttaagctac 3359  T
Q  390 atatattatgtgaatattgtatgatatagaaa 421  Q
    |||||||||||| | | |||||||||||||||    
T  3358 atatattatgtggaaaatgtatgatatagaaa 3327  T

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Target: scaffold1276 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 406
Target Start/End: Complemental strand, 445 - 388
Alignment:
Q  349 ctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatat 406  Q
    ||||||||||||||||||   ||||||||||||| | |||| ||||||||||||||||    
T  445 ctgaattaatatgaatatctttgttggataatttgaaatacttatattatgtgaatat 388  T

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Target: scaffold0452 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 13329 - 13382
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||| |||  |||||||||||||||||||    
T  13329 tgttgaataatttgagatacatatattatttgatgattgtatgatatagaaata 13382  T

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Target: scaffold0293 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 320
Target Start/End: Complemental strand, 17800 - 17727
Alignment:
Q  247 ccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttg 320  Q
    ||||||||||  ||||| |||||||| ||||||| || |||  |||||| ||||||||||||||||||| ||||    
T  17800 ccttgtttagagttcttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttg 17727  T

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Target: scaffold0273 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 7043 - 7006
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  7043 gagttggtccttggggtaggaatggaagttgtttataa 7006  T

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Target: scaffold0273; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 6963 - 6912
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
    |||||| ||||||||| ||||||||||||||| | | |||||||||||||||    
T  6963 tgttggttaatttaagctacatatattatgtggaaaatgtatgatatagaaa 6912  T

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Target: scaffold0117 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 40854 - 40891
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  40854 gagttggtccttggggtaggaatggaagttgtttataa 40891  T

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Target: scaffold0098 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 39487 - 39418
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaatattgatgtccatctcat 439  Q
    ||||||||||||| | ||||||||||||| ||||| ||| ||| | ||||||||||||||| ||| ||||    
T  39487 tgttggataatttgaaatacatatattatatgaatgttgaatgttgtagaaatattgatgttcatatcat 39418  T

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Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 120298 - 120245
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaata 423  Q
    ||||| ||||||| ||||||||||||||| ||| |||| |||||||||||||||    
T  120298 tgttgaataatttgagatacatatattatttgattattttatgatatagaaata 120245  T

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Target: scaffold0034; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 34122 - 34209
Alignment:
Q  84 ttagaatcagttttaaggttagagttatggaattaggtgagtcttgttgaaaactgcattctgcccgtagaactgacattcatcgctcgcc 174  Q
    |||||||||||||||||||||||   |||| ||| ||||| | ||   |||||||||| |||||||||   || |||||||||||||||||    
T  34122 ttagaatcagttttaaggttagaacaatgggattgggtgaatttttaagaaaactgcaatctgcccgt---acagacattcatcgctcgcc 34209  T

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Target: scaffold0490 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 5246 - 5210
Alignment:
Q  291 agttggtccttggggtaggaatggaagttgttcataa 327  Q
    |||||||||||||||||||||||||||||||| ||||    
T  5246 agttggtccttggggtaggaatggaagttgtttataa 5210  T

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Target: scaffold0356 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 502 - 557
Alignment:
Q  265 cgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttg 320  Q
    |||||||| ||||||| || ||| ||||||| ||||||||||||||||||| ||||    
T  502 cgatctttgtcgcacgagatgttacgagttgatccttggggtaggaatggaggttg 557  T

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Target: scaffold0107 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 421
Target Start/End: Complemental strand, 3301 - 3170
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttggataatttaagatac 389  Q
    ||||||||||||||||||||||||||||||| | ||||   ||| | | |  ||||| ||| |  |||||| | |  ||||||||| ||||||||| ||     
T  3301 gagttggtccttggggtaggaatggaagttgattataaaggtatagcttttcagtgaatctaagctaatataattgatgatgttggttaatttaagctat 3202  T
Q  390 atatattatgtgaatattgtatgatatagaaa 421  Q
    |||||||||| | | | |||||||||||||||    
T  3201 atatattatggggaaaatgtatgatatagaaa 3170  T

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Target: scaffold0083 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 646 - 696
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
    ||||||||||||| |||||||||||||||||||| |  ||||||||||||||    
T  646 tgttggataatttgagatacatatattatgtgaa-aaggtatgatatagaaa 696  T

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Target: scaffold0083; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 5950 - 6000
Alignment:
Q  370 tgttggataatttaagatacatatattatgtgaatattgtatgatatagaaa 421  Q
    ||||||||||||| |||||||||||||||||||| |  ||||||||||||||    
T  5950 tgttggataatttgagatacatatattatgtgaa-aaggtatgatatagaaa 6000  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 320
Target Start/End: Complemental strand, 85825 - 85770
Alignment:
Q  265 cgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttg 320  Q
    |||||||| ||||||| || ||| ||||||| ||||||||||||||||||| ||||    
T  85825 cgatctttgtcgcacgagatgttacgagttgatccttggggtaggaatggaggttg 85770  T

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Target: scaffold0413 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 11100 - 11062
Alignment:
Q  289 cgagttggtccttggggtaggaatggaagttgttcataa 327  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  11100 cgagttggtctttggggtaggaatggaagttgtttataa 11062  T

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Target: scaffold0379 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 322
Target Start/End: Original strand, 14432 - 14510
Alignment:
Q  244 caaccttgtttagttttcttacgatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgtt 322  Q
    |||||||||||||  ||||| |||||||| |||||||    |||  ||||||||||||||||||||||||  |||||||    
T  14432 caaccttgtttagggttcttgcgatctttgtcgcacgaagagttatgagttggtccttggggtaggaatgagagttgtt 14510  T

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Target: scaffold0377 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 16743 - 16785
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattata 332  Q
    |||||||||||||||||||||||| |||||||| || ||||||    
T  16743 gagttggtccttggggtaggaatgaaagttgttaatgattata 16785  T

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Target: scaffold0149 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 36183 - 36225
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataattata 332  Q
    ||||||||||||||||||||||| ||||||||| || ||||||    
T  36183 gagttggtccttggggtaggaatagaagttgttaatgattata 36225  T

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Target: scaffold0429 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 2619 - 2656
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  2619 gagttggtccttggggtaggaatggatgttgtttataa 2656  T

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Target: scaffold0309 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 6329 - 6292
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  6329 gagttggtccttggggttggaatggaagttgtttataa 6292  T

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Target: scaffold0309; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 8481 - 8444
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  8481 gagttggtccttggggttggaatggaagttgtttataa 8444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 1905 - 1942
Alignment:
Q  290 gagttggtccttggggtaggaatggaagttgttcataa 327  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  1905 gagttggtctttggggtaggaatggaagttgtttataa 1942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 5951 - 6019
Alignment:
Q  21 tagaaatctgatgaattgatgtagaaatagtgtctagaccttaggttattcatagaacaatgattagaa 89  Q
    |||||| ||| |||||| | | ||||| |||||  ||||||||| |||||||||| |||||||||||||    
T  5951 tagaaacctgttgaattaaggaagaaacagtgttcagaccttagattattcatagcacaatgattagaa 6019  T

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Target: scaffold0112 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 412
Target Start/End: Complemental strand, 2193 - 2132
Alignment:
Q  349 ctgaattaatatgaatattgatgttggataatttaagatacatatattatgtgaatattgtatg 412  Q
    |||| ||||||||| |||||  ||||||||  || | |||||||||||||||||||||||||||    
T  2193 ctgatttaatatgagtattgtcgttggata--ttgaaatacatatattatgtgaatattgtatg 2132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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