View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8901_low_88 (Length: 355)

Name: NF8901_low_88
Description: NF8901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8901_low_88
NF8901_low_88
[»] chr1 (51 HSPs)
chr1 (76-355)||(44822063-44822342)
chr1 (68-340)||(24723408-24723680)
chr1 (60-343)||(7051976-7052241)
chr1 (18-131)||(297139-297252)
chr1 (18-131)||(28313132-28313245)
chr1 (68-197)||(21188126-21188253)
chr1 (18-130)||(8276148-8276260)
chr1 (18-130)||(38056831-38056942)
chr1 (60-172)||(46197862-46197973)
chr1 (46-197)||(8306414-8306564)
chr1 (83-197)||(22350516-22350630)
chr1 (80-234)||(22823265-22823419)
chr1 (18-172)||(17901918-17902073)
chr1 (60-131)||(23194668-23194739)
chr1 (21-172)||(29763749-29763899)
chr1 (60-172)||(50001300-50001411)
chr1 (60-131)||(22130181-22130252)
chr1 (261-343)||(51324420-51324502)
chr1 (49-172)||(21239159-21239282)
chr1 (76-131)||(45574175-45574230)
chr1 (261-354)||(7320637-7320730)
chr1 (80-199)||(20708149-20708268)
chr1 (78-131)||(13880692-13880745)
chr1 (21-172)||(34392551-34392702)
chr1 (60-172)||(6833990-6834105)
chr1 (68-169)||(22145788-22145889)
chr1 (80-197)||(39061163-39061280)
chr1 (275-355)||(22350646-22350726)
chr1 (273-328)||(19676639-19676694)
chr1 (291-354)||(13302847-13302910)
chr1 (273-328)||(16058383-16058437)
chr1 (98-175)||(7702975-7703052)
chr1 (294-355)||(45755468-45755529)
chr1 (269-308)||(8276079-8276118)
chr1 (273-328)||(21046118-21046173)
chr1 (269-308)||(38056762-38056801)
chr1 (273-328)||(42912977-42913032)
chr1 (287-355)||(13989703-13989772)
chr1 (287-355)||(14237697-14237766)
chr1 (273-310)||(20633721-20633758)
chr1 (99-172)||(21243853-21243926)
chr1 (287-355)||(21474340-21474409)
chr1 (287-355)||(23592986-23593055)
chr1 (287-355)||(41373311-41373380)
chr1 (269-354)||(4595897-4595974)
chr1 (294-354)||(42697732-42697792)
chr1 (287-355)||(21922545-21922614)
chr1 (287-355)||(51083115-51083184)
chr1 (275-355)||(51476922-51477003)
chr1 (180-216)||(22823264-22823300)
chr1 (296-355)||(48444341-48444401)
[»] chr2 (76 HSPs)
chr2 (76-343)||(1383597-1383864)
chr2 (106-348)||(24884231-24884473)
chr2 (76-354)||(22501700-22501979)
chr2 (76-354)||(22509634-22509913)
chr2 (180-343)||(357716-357879)
chr2 (18-131)||(23338555-23338668)
chr2 (20-131)||(13100890-13101001)
chr2 (68-197)||(45535758-45535885)
chr2 (22-131)||(10684088-10684197)
chr2 (22-131)||(20261947-20262056)
chr2 (80-243)||(25584347-25584511)
chr2 (83-197)||(18388328-18388442)
chr2 (76-197)||(19647074-19647193)
chr2 (49-131)||(21072844-21072926)
chr2 (60-197)||(149598-149734)
chr2 (21-172)||(25183974-25184124)
chr2 (60-172)||(18358084-18358195)
chr2 (46-188)||(28345136-28345277)
chr2 (68-197)||(20006063-20006192)
chr2 (76-172)||(12626548-12626644)
chr2 (60-131)||(20590438-20590509)
chr2 (60-131)||(41301085-41301156)
chr2 (60-172)||(21081086-21081197)
chr2 (60-156)||(21915448-21915544)
chr2 (78-197)||(45528383-45528500)
chr2 (275-354)||(25142133-25142212)
chr2 (97-166)||(45535657-45535726)
chr2 (76-131)||(43707203-43707258)
chr2 (76-175)||(28652664-28652763)
chr2 (76-130)||(36734610-36734664)
chr2 (269-354)||(3539760-3539845)
chr2 (275-355)||(18388232-18388312)
chr2 (76-131)||(7187267-7187322)
chr2 (76-131)||(22173133-22173188)
chr2 (280-355)||(22259974-22260048)
chr2 (273-339)||(24516114-24516180)
chr2 (21-131)||(31345906-31346016)
chr2 (275-355)||(19358820-19358901)
chr2 (68-172)||(14183582-14183686)
chr2 (273-328)||(5031198-5031253)
chr2 (273-328)||(9975857-9975912)
chr2 (273-328)||(17307414-17307469)
chr2 (273-328)||(22251517-22251572)
chr2 (273-328)||(24780909-24780964)
chr2 (283-354)||(27852605-27852676)
chr2 (76-121)||(31521018-31521063)
chr2 (273-328)||(19201269-19201324)
chr2 (273-328)||(27484546-27484601)
chr2 (273-328)||(40912248-40912303)
chr2 (98-172)||(23801355-23801429)
chr2 (273-339)||(36841192-36841258)
chr2 (287-355)||(18809780-18809849)
chr2 (287-355)||(23711269-23711338)
chr2 (287-355)||(28577942-28578011)
chr2 (287-355)||(32038753-32038822)
chr2 (294-354)||(5986125-5986185)
chr2 (78-130)||(14179886-14179938)
chr2 (296-355)||(22690585-22690645)
chr2 (296-355)||(9785489-9785548)
chr2 (273-328)||(24436576-24436631)
chr2 (273-328)||(37270627-37270682)
chr2 (285-354)||(18390258-18390326)
chr2 (287-355)||(23131699-23131768)
chr2 (287-355)||(23134166-23134235)
chr2 (287-355)||(23136405-23136474)
chr2 (287-355)||(24897451-24897520)
chr2 (287-355)||(24899934-24900003)
chr2 (287-355)||(24902411-24902480)
chr2 (287-355)||(24904888-24904957)
chr2 (287-355)||(24907363-24907432)
chr2 (287-355)||(26508694-26508763)
chr2 (287-355)||(34401778-34401847)
chr2 (287-355)||(39683153-39683222)
chr2 (296-355)||(22695181-22695241)
chr2 (287-354)||(26506216-26506284)
chr2 (287-354)||(27920021-27920089)
[»] chr7 (87 HSPs)
chr7 (76-307)||(14274063-14274294)
chr7 (60-231)||(12754721-12754893)
chr7 (17-131)||(14188449-14188563)
chr7 (76-304)||(708523-708733)
chr7 (218-343)||(47974874-47974999)
chr7 (18-131)||(11661889-11662002)
chr7 (18-131)||(16108014-16108127)
chr7 (22-131)||(23664278-23664387)
chr7 (60-196)||(47974983-47975119)
chr7 (22-131)||(11303975-11304084)
chr7 (22-131)||(29797338-29797447)
chr7 (22-131)||(29801157-29801266)
chr7 (18-130)||(17070448-17070560)
chr7 (60-188)||(19195016-19195144)
chr7 (46-188)||(37539259-37539400)
chr7 (78-175)||(42565945-42566042)
chr7 (60-131)||(4325921-4325992)
chr7 (60-131)||(14105583-14105654)
chr7 (60-131)||(14415600-14415671)
chr7 (60-172)||(16550119-16550230)
chr7 (60-172)||(16615432-16615543)
chr7 (60-172)||(32160317-32160428)
chr7 (261-355)||(15095679-15095773)
chr7 (261-355)||(15140129-15140223)
chr7 (68-197)||(33060271-33060398)
chr7 (20-172)||(13315197-13315349)
chr7 (59-131)||(17505120-17505192)
chr7 (59-131)||(17548022-17548094)
chr7 (60-131)||(44190372-44190443)
chr7 (80-198)||(21661099-21661217)
chr7 (76-172)||(29052299-29052394)
chr7 (49-131)||(13256507-13256589)
chr7 (60-131)||(13648107-13648178)
chr7 (275-354)||(13698682-13698761)
chr7 (76-131)||(16462910-16462965)
chr7 (76-130)||(25942312-25942366)
chr7 (46-172)||(38295413-38295538)
chr7 (60-172)||(19282870-19282982)
chr7 (60-131)||(1856556-1856627)
chr7 (268-347)||(8135287-8135366)
chr7 (68-131)||(39431343-39431406)
chr7 (277-355)||(12557853-12557931)
chr7 (21-131)||(13917728-13917838)
chr7 (285-354)||(14218939-14219008)
chr7 (285-354)||(35771485-35771554)
chr7 (76-131)||(13864518-13864573)
chr7 (273-328)||(20620214-20620269)
chr7 (273-339)||(12127221-12127287)
chr7 (269-347)||(13132371-13132449)
chr7 (275-355)||(11054642-11054723)
chr7 (78-131)||(18455744-18455797)
chr7 (20-172)||(18570430-18570581)
chr7 (285-352)||(4071759-4071826)
chr7 (273-328)||(8851228-8851283)
chr7 (273-328)||(10277255-10277310)
chr7 (273-328)||(12322999-12323054)
chr7 (273-328)||(12465329-12465384)
chr7 (273-328)||(13147541-13147596)
chr7 (285-352)||(15289044-15289111)
chr7 (277-347)||(41284963-41285033)
chr7 (290-343)||(12754666-12754719)
chr7 (269-354)||(48807369-48807454)
chr7 (262-310)||(33002078-33002126)
chr7 (21-172)||(8930883-8931034)
chr7 (273-328)||(14180467-14180522)
chr7 (276-347)||(15623950-15624021)
chr7 (273-328)||(20214075-20214130)
chr7 (273-328)||(32433658-32433713)
chr7 (21-167)||(36300761-36300907)
chr7 (296-343)||(36685199-36685246)
chr7 (273-328)||(46386157-46386212)
chr7 (287-355)||(457160-457229)
chr7 (273-326)||(12372202-12372255)
chr7 (287-355)||(13870183-13870252)
chr7 (287-355)||(15375969-15376038)
chr7 (287-355)||(16460077-16460146)
chr7 (262-303)||(17070384-17070425)
chr7 (287-355)||(20384379-20384448)
chr7 (287-355)||(41523757-41523826)
chr7 (287-355)||(41526219-41526288)
chr7 (296-355)||(18628412-18628472)
chr7 (273-328)||(11067396-11067451)
chr7 (287-355)||(16410897-16410966)
chr7 (287-355)||(27217699-27217767)
chr7 (287-355)||(32126328-32126397)
chr7 (296-355)||(18641118-18641178)
chr7 (106-134)||(23557404-23557432)
[»] chr5 (39 HSPs)
chr5 (76-307)||(30138064-30138295)
chr5 (106-343)||(31456721-31456958)
chr5 (76-355)||(36508676-36508955)
chr5 (185-355)||(17876044-17876213)
chr5 (18-131)||(27868730-27868843)
chr5 (18-131)||(33472719-33472832)
chr5 (76-197)||(17875897-17876018)
chr5 (22-131)||(9776893-9777002)
chr5 (20-131)||(41875748-41875859)
chr5 (22-131)||(37804228-37804337)
chr5 (46-169)||(21503950-21504072)
chr5 (60-172)||(17011552-17011663)
chr5 (21-172)||(265823-265973)
chr5 (60-131)||(24594219-24594290)
chr5 (21-172)||(29448625-29448775)
chr5 (62-131)||(24668313-24668382)
chr5 (62-131)||(24738082-24738151)
chr5 (62-131)||(24750851-24750920)
chr5 (60-131)||(18419277-18419348)
chr5 (275-355)||(21405670-21405751)
chr5 (273-328)||(7484930-7484985)
chr5 (20-130)||(20313059-20313169)
chr5 (277-347)||(31251941-31252011)
chr5 (62-175)||(21398911-21399024)
chr5 (78-131)||(22412930-22412983)
chr5 (273-339)||(19921566-19921632)
chr5 (279-348)||(21617978-21618047)
chr5 (296-355)||(39245982-39246042)
chr5 (273-328)||(21300113-21300168)
chr5 (273-311)||(31622053-31622091)
chr5 (287-355)||(264024-264093)
chr5 (273-306)||(20566482-20566515)
chr5 (287-355)||(29346818-29346887)
chr5 (287-355)||(29349291-29349360)
chr5 (287-355)||(29351764-29351833)
chr5 (287-355)||(38620273-38620342)
chr5 (287-355)||(39364221-39364290)
chr5 (80-128)||(16063527-16063575)
chr5 (316-352)||(20469222-20469258)
[»] scaffold0230 (2 HSPs)
scaffold0230 (76-343)||(6739-7006)
scaffold0230 (298-355)||(14798-14856)
[»] chr4 (54 HSPs)
chr4 (60-343)||(14549474-14549758)
chr4 (60-343)||(19434613-19434887)
chr4 (18-131)||(28386027-28386140)
chr4 (18-131)||(49547099-49547212)
chr4 (20-131)||(33849528-33849639)
chr4 (22-131)||(36038598-36038707)
chr4 (22-131)||(15534909-15535018)
chr4 (60-172)||(10694362-10694473)
chr4 (68-188)||(18462855-18462975)
chr4 (46-197)||(16296681-16296831)
chr4 (60-185)||(35660712-35660837)
chr4 (22-130)||(9638795-9638903)
chr4 (59-131)||(16277443-16277515)
chr4 (59-131)||(53387053-53387125)
chr4 (68-175)||(14477464-14477571)
chr4 (21-172)||(15008753-15008903)
chr4 (21-172)||(40620317-40620467)
chr4 (60-172)||(10908128-10908239)
chr4 (80-224)||(45314202-45314345)
chr4 (80-199)||(14353888-14354007)
chr4 (49-131)||(18230555-18230637)
chr4 (66-175)||(13164963-13165072)
chr4 (76-131)||(15344776-15344831)
chr4 (78-131)||(23802560-23802613)
chr4 (76-131)||(12611752-12611807)
chr4 (79-172)||(9622330-9622423)
chr4 (277-354)||(9924085-9924162)
chr4 (78-131)||(15447533-15447586)
chr4 (76-131)||(51463184-51463239)
chr4 (275-354)||(9870488-9870568)
chr4 (273-328)||(6633606-6633661)
chr4 (273-328)||(16998453-16998508)
chr4 (273-328)||(25091581-25091636)
chr4 (273-328)||(46001600-46001655)
chr4 (273-328)||(53630543-53630598)
chr4 (273-339)||(37019598-37019664)
chr4 (269-308)||(9638933-9638972)
chr4 (277-328)||(10356505-10356556)
chr4 (273-328)||(11425871-11425926)
chr4 (279-354)||(11478697-11478772)
chr4 (287-355)||(15117608-15117677)
chr4 (298-350)||(21062593-21062645)
chr4 (76-131)||(13043925-13043980)
chr4 (273-328)||(15115150-15115205)
chr4 (273-312)||(26921706-26921745)
chr4 (273-328)||(42875725-42875780)
chr4 (298-355)||(12033027-12033085)
chr4 (287-355)||(3485806-3485875)
chr4 (287-355)||(14873341-14873410)
chr4 (287-355)||(18238868-18238937)
chr4 (287-355)||(19243540-19243609)
chr4 (287-355)||(44616128-44616197)
chr4 (287-355)||(50221594-50221663)
chr4 (294-354)||(21144-21204)
[»] scaffold0040 (2 HSPs)
scaffold0040 (76-343)||(106105-106373)
scaffold0040 (287-355)||(13075-13144)
[»] chr6 (54 HSPs)
chr6 (76-343)||(18585519-18585803)
chr6 (18-131)||(23956646-23956759)
chr6 (17-131)||(13765129-13765243)
chr6 (22-131)||(28288662-28288771)
chr6 (18-131)||(31021877-31021987)
chr6 (22-131)||(12942917-12943026)
chr6 (46-188)||(35057355-35057496)
chr6 (18-130)||(19825645-19825757)
chr6 (21-172)||(15891686-15891836)
chr6 (21-172)||(15900771-15900921)
chr6 (60-172)||(29045088-29045200)
chr6 (79-197)||(18982255-18982374)
chr6 (70-187)||(13285582-13285699)
chr6 (80-199)||(3006963-3007082)
chr6 (78-131)||(23226013-23226066)
chr6 (60-156)||(15173585-15173681)
chr6 (263-355)||(19401012-19401104)
chr6 (18-81)||(25807916-25807979)
chr6 (261-343)||(28948490-28948573)
chr6 (106-175)||(18459176-18459245)
chr6 (78-131)||(25619053-25619106)
chr6 (76-131)||(20556188-20556243)
chr6 (60-131)||(23415730-23415801)
chr6 (76-175)||(24506228-24506327)
chr6 (46-172)||(1818763-1818888)
chr6 (269-354)||(23501595-23501681)
chr6 (76-131)||(611641-611696)
chr6 (279-354)||(18928614-18928689)
chr6 (89-131)||(14978697-14978739)
chr6 (273-339)||(15890770-15890836)
chr6 (273-339)||(27330039-27330105)
chr6 (273-339)||(27390779-27390845)
chr6 (60-130)||(27557488-27557558)
chr6 (273-328)||(7827900-7827955)
chr6 (273-328)||(23150356-23150411)
chr6 (78-124)||(5833817-5833863)
chr6 (273-339)||(19655289-19655355)
chr6 (80-200)||(31166063-31166184)
chr6 (99-175)||(25601439-25601515)
chr6 (287-355)||(18333848-18333917)
chr6 (287-355)||(24423384-24423453)
chr6 (285-354)||(31731948-31732017)
chr6 (287-355)||(33865115-33865184)
chr6 (296-355)||(18343037-18343097)
chr6 (62-129)||(25921828-25921894)
chr6 (273-328)||(27125546-27125601)
chr6 (298-355)||(12743168-12743226)
chr6 (287-355)||(1540167-1540236)
chr6 (287-355)||(22783065-22783134)
chr6 (279-355)||(25753372-25753448)
chr6 (279-355)||(25755542-25755618)
chr6 (287-355)||(26923701-26923770)
chr6 (280-328)||(18703503-18703551)
chr6 (280-328)||(18709438-18709486)
[»] scaffold0026 (3 HSPs)
scaffold0026 (60-249)||(21946-22135)
scaffold0026 (137-249)||(9926-10038)
scaffold0026 (273-328)||(146651-146706)
[»] scaffold0338 (1 HSPs)
scaffold0338 (188-307)||(80-199)
[»] chr8 (62 HSPs)
chr8 (18-131)||(8413904-8414017)
chr8 (79-234)||(22344966-22345121)
chr8 (79-234)||(22356626-22356781)
chr8 (18-130)||(19882731-19882843)
chr8 (76-218)||(20517126-20517268)
chr8 (18-110)||(11775506-11775598)
chr8 (60-172)||(25657631-25657742)
chr8 (83-197)||(42265647-42265761)
chr8 (76-181)||(20879313-20879418)
chr8 (60-172)||(16198660-16198771)
chr8 (60-171)||(23478906-23479016)
chr8 (76-169)||(22483620-22483713)
chr8 (261-343)||(22532186-22532268)
chr8 (261-343)||(22536871-22536953)
chr8 (80-205)||(36305686-36305811)
chr8 (76-172)||(19880663-19880758)
chr8 (259-355)||(22317953-22318049)
chr8 (76-172)||(26454546-26454641)
chr8 (68-172)||(36732600-36732704)
chr8 (21-172)||(22610382-22610532)
chr8 (18-81)||(17796016-17796079)
chr8 (76-131)||(25483597-25483652)
chr8 (78-131)||(23661140-23661193)
chr8 (269-354)||(45469263-45469348)
chr8 (79-131)||(20455831-20455883)
chr8 (79-131)||(20460809-20460861)
chr8 (80-199)||(22708414-22708533)
chr8 (78-131)||(17460363-17460416)
chr8 (82-131)||(20463042-20463091)
chr8 (79-131)||(20455095-20455147)
chr8 (106-166)||(21676713-21676773)
chr8 (275-355)||(42265551-42265631)
chr8 (273-328)||(20083707-20083762)
chr8 (21-131)||(14397066-14397175)
chr8 (275-355)||(3273819-3273900)
chr8 (269-350)||(31722541-31722622)
chr8 (68-172)||(12037280-12037384)
chr8 (273-328)||(5082281-5082336)
chr8 (273-328)||(6202704-6202759)
chr8 (273-328)||(19140693-19140748)
chr8 (273-328)||(37292633-37292688)
chr8 (66-172)||(23883999-23884105)
chr8 (287-355)||(20045451-20045520)
chr8 (285-354)||(36727082-36727151)
chr8 (274-343)||(39694331-39694400)
chr8 (269-354)||(20022084-20022161)
chr8 (273-328)||(20178598-20178654)
chr8 (273-328)||(5761462-5761517)
chr8 (273-328)||(6573125-6573180)
chr8 (287-355)||(1485239-1485308)
chr8 (287-355)||(4484117-4484186)
chr8 (287-355)||(14408700-14408769)
chr8 (287-355)||(14824613-14824682)
chr8 (273-328)||(6101822-6101877)
chr8 (118-185)||(21678947-21679014)
chr8 (296-355)||(25733862-25733921)
chr8 (273-328)||(39936079-39936134)
chr8 (273-328)||(42817976-42818031)
chr8 (286-355)||(4541626-4541696)
chr8 (287-355)||(18677318-18677387)
chr8 (210-243)||(20517120-20517153)
chr8 (294-355)||(23948211-23948272)
[»] chr3 (88 HSPs)
chr3 (18-131)||(42311-42424)
chr3 (18-131)||(16324696-16324809)
chr3 (76-215)||(13522422-13522560)
chr3 (18-131)||(3803597-3803710)
chr3 (76-215)||(6805000-6805139)
chr3 (22-131)||(12305850-12305959)
chr3 (18-131)||(13437022-13437135)
chr3 (22-131)||(29544189-29544298)
chr3 (18-131)||(54521546-54521659)
chr3 (21-172)||(45803453-45803603)
chr3 (76-172)||(48631172-48631268)
chr3 (49-131)||(18890238-18890320)
chr3 (25-130)||(14641707-14641812)
chr3 (21-172)||(16979697-16979847)
chr3 (60-131)||(55291757-55291828)
chr3 (60-172)||(22652597-22652708)
chr3 (60-131)||(43549811-43549882)
chr3 (49-131)||(18893497-18893579)
chr3 (263-355)||(49968901-49968993)
chr3 (60-131)||(10555132-10555203)
chr3 (72-131)||(46722742-46722801)
chr3 (77-199)||(6003025-6003147)
chr3 (261-343)||(9510970-9511052)
chr3 (261-343)||(9518945-9519027)
chr3 (136-214)||(24177843-24177921)
chr3 (20-169)||(29907420-29907569)
chr3 (20-169)||(29948586-29948735)
chr3 (20-169)||(29997740-29997889)
chr3 (68-172)||(12155143-12155247)
chr3 (20-128)||(48043638-48043745)
chr3 (76-131)||(6820011-6820066)
chr3 (76-181)||(3160733-3160838)
chr3 (277-354)||(35960972-35961049)
chr3 (63-128)||(43929219-43929284)
chr3 (21-172)||(3527271-3527422)
chr3 (60-131)||(5224148-5224219)
chr3 (262-341)||(19568264-19568343)
chr3 (60-131)||(26054590-26054661)
chr3 (208-265)||(13522391-13522448)
chr3 (78-131)||(16643926-16643979)
chr3 (78-131)||(24152540-24152593)
chr3 (277-354)||(33565018-33565095)
chr3 (78-131)||(50243656-50243709)
chr3 (275-354)||(37038978-37039058)
chr3 (76-131)||(10833461-10833516)
chr3 (275-354)||(11563654-11563733)
chr3 (60-131)||(15465920-15465991)
chr3 (275-354)||(42324015-42324094)
chr3 (208-249)||(6804985-6805026)
chr3 (285-354)||(13185834-13185903)
chr3 (275-355)||(45530644-45530725)
chr3 (273-328)||(10311455-10311510)
chr3 (273-328)||(10563636-10563691)
chr3 (273-328)||(17044894-17044949)
chr3 (273-328)||(17518942-17518997)
chr3 (273-328)||(17533804-17533859)
chr3 (273-328)||(40807924-40807979)
chr3 (273-328)||(49900658-49900713)
chr3 (273-328)||(50348095-50348150)
chr3 (273-347)||(11259359-11259433)
chr3 (286-343)||(24177790-24177847)
chr3 (96-172)||(12151063-12151139)
chr3 (280-328)||(35064610-35064658)
chr3 (86-197)||(12917404-12917515)
chr3 (273-328)||(22306652-22306707)
chr3 (273-328)||(40812761-40812816)
chr3 (273-328)||(41172440-41172495)
chr3 (285-354)||(11885601-11885669)
chr3 (287-355)||(15413268-15413337)
chr3 (287-355)||(17464015-17464084)
chr3 (287-355)||(34160163-34160232)
chr3 (287-355)||(45577697-45577766)
chr3 (62-175)||(50350930-50351043)
chr3 (287-355)||(55477329-55477398)
chr3 (269-308)||(14641638-14641677)
chr3 (280-327)||(15931577-15931624)
chr3 (273-328)||(17047054-17047109)
chr3 (273-328)||(17539034-17539089)
chr3 (273-328)||(44274346-44274401)
chr3 (298-355)||(13151044-13151102)
chr3 (298-355)||(13153512-13153570)
chr3 (287-355)||(1864409-1864478)
chr3 (287-355)||(10246978-10247047)
chr3 (287-355)||(15978372-15978441)
chr3 (279-328)||(17694001-17694050)
chr3 (287-355)||(28847875-28847944)
chr3 (296-355)||(6468390-6468450)
chr3 (273-325)||(35354530-35354582)
[»] scaffold0001 (5 HSPs)
scaffold0001 (18-131)||(169223-169336)
scaffold0001 (18-131)||(176576-176689)
scaffold0001 (273-327)||(31922-31976)
scaffold0001 (273-327)||(37229-37283)
scaffold0001 (273-328)||(77615-77670)
[»] scaffold0439 (3 HSPs)
scaffold0439 (76-215)||(12081-12219)
scaffold0439 (274-347)||(12323-12397)
scaffold0439 (227-268)||(12212-12253)
[»] scaffold0156 (1 HSPs)
scaffold0156 (226-343)||(16485-16602)
[»] scaffold0061 (2 HSPs)
scaffold0061 (18-172)||(14703-14856)
scaffold0061 (18-172)||(23761-23914)
[»] scaffold0149 (4 HSPs)
scaffold0149 (218-343)||(21484-21609)
scaffold0149 (68-196)||(21372-21500)
scaffold0149 (274-328)||(29642-29696)
scaffold0149 (49-126)||(35700-35777)
[»] scaffold0453 (1 HSPs)
scaffold0453 (18-131)||(7166-7279)
[»] scaffold0422 (1 HSPs)
scaffold0422 (18-131)||(3747-3860)
[»] scaffold0217 (1 HSPs)
scaffold0217 (18-175)||(28497-28653)
[»] scaffold0138 (2 HSPs)
scaffold0138 (21-172)||(20882-21032)
scaffold0138 (60-157)||(33937-34033)
[»] scaffold0046 (1 HSPs)
scaffold0046 (60-171)||(21895-22005)
[»] scaffold0034 (1 HSPs)
scaffold0034 (21-172)||(29333-29483)
[»] scaffold0180 (2 HSPs)
scaffold0180 (83-197)||(28467-28581)
scaffold0180 (275-355)||(28371-28451)
[»] scaffold0007 (4 HSPs)
scaffold0007 (76-197)||(18950-19072)
scaffold0007 (83-186)||(158971-159074)
scaffold0007 (275-355)||(158864-158944)
scaffold0007 (146-197)||(16667-16718)
[»] scaffold0092 (1 HSPs)
scaffold0092 (68-197)||(38534-38662)
[»] scaffold0148 (1 HSPs)
scaffold0148 (20-172)||(8625-8777)
[»] scaffold0083 (4 HSPs)
scaffold0083 (21-172)||(1722-1872)
scaffold0083 (262-343)||(10809-10888)
scaffold0083 (91-131)||(42153-42193)
scaffold0083 (276-308)||(5124-5156)
[»] scaffold0116 (2 HSPs)
scaffold0116 (83-197)||(35602-35716)
scaffold0116 (275-355)||(35506-35586)
[»] scaffold0555 (1 HSPs)
scaffold0555 (76-188)||(8897-9009)
[»] scaffold0057 (2 HSPs)
scaffold0057 (60-172)||(69970-70081)
scaffold0057 (76-131)||(72278-72333)
[»] scaffold0220 (4 HSPs)
scaffold0220 (18-117)||(13730-13829)
scaffold0220 (269-308)||(13872-13911)
scaffold0220 (18-62)||(8907-8951)
scaffold0220 (316-354)||(19924-19962)
[»] scaffold0113 (2 HSPs)
scaffold0113 (49-168)||(35305-35424)
scaffold0113 (273-310)||(35420-35457)
[»] scaffold0436 (1 HSPs)
scaffold0436 (60-172)||(8784-8895)
[»] scaffold0328 (2 HSPs)
scaffold0328 (18-106)||(18824-18912)
scaffold0328 (269-308)||(18731-18770)
[»] scaffold0017 (3 HSPs)
scaffold0017 (81-197)||(23458-23573)
scaffold0017 (80-200)||(26535-26655)
scaffold0017 (294-346)||(561-613)
[»] scaffold0151 (2 HSPs)
scaffold0151 (60-131)||(9920-9991)
scaffold0151 (282-354)||(31046-31117)
[»] scaffold0058 (2 HSPs)
scaffold0058 (60-131)||(39968-40039)
scaffold0058 (69-176)||(59767-59874)
[»] scaffold0021 (2 HSPs)
scaffold0021 (69-176)||(16940-17047)
scaffold0021 (69-176)||(26471-26578)
[»] scaffold0308 (2 HSPs)
scaffold0308 (83-197)||(13240-13354)
scaffold0308 (275-355)||(13370-13450)
[»] scaffold1800 (1 HSPs)
scaffold1800 (76-197)||(446-567)
[»] scaffold0676 (1 HSPs)
scaffold0676 (60-197)||(2638-2774)
[»] scaffold0213 (1 HSPs)
scaffold0213 (79-188)||(18958-19066)
[»] scaffold0139 (2 HSPs)
scaffold0139 (137-234)||(40276-40373)
scaffold0139 (180-243)||(40248-40311)
[»] scaffold0848 (1 HSPs)
scaffold0848 (263-355)||(2063-2155)
[»] scaffold0462 (3 HSPs)
scaffold0462 (60-188)||(1094-1222)
scaffold0462 (60-188)||(6600-6728)
scaffold0462 (60-172)||(11047-11158)
[»] scaffold1276 (1 HSPs)
scaffold1276 (49-128)||(954-1033)
[»] scaffold0364 (1 HSPs)
scaffold0364 (76-131)||(8005-8060)
[»] scaffold0175 (1 HSPs)
scaffold0175 (261-355)||(8557-8652)
[»] scaffold0730 (1 HSPs)
scaffold0730 (18-172)||(6620-6774)
[»] scaffold0205 (1 HSPs)
scaffold0205 (20-172)||(5732-5883)
[»] scaffold0037 (4 HSPs)
scaffold0037 (279-355)||(81501-81577)
scaffold0037 (272-348)||(113017-113093)
scaffold0037 (76-131)||(82839-82894)
scaffold0037 (272-308)||(117890-117926)
[»] scaffold0334 (2 HSPs)
scaffold0334 (68-131)||(1958-2021)
scaffold0334 (273-328)||(446-501)
[»] scaffold0070 (1 HSPs)
scaffold0070 (76-131)||(8932-8987)
[»] scaffold0016 (1 HSPs)
scaffold0016 (60-131)||(174264-174335)
[»] scaffold0004 (4 HSPs)
scaffold0004 (18-165)||(66202-66348)
scaffold0004 (273-323)||(328364-328414)
scaffold0004 (273-310)||(72872-72909)
scaffold0004 (285-354)||(110113-110182)
[»] scaffold0956 (1 HSPs)
scaffold0956 (77-131)||(2251-2305)
[»] scaffold0337 (1 HSPs)
scaffold0337 (76-197)||(3045-3164)
[»] scaffold0106 (1 HSPs)
scaffold0106 (68-130)||(21817-21879)
[»] scaffold0594 (1 HSPs)
scaffold0594 (71-172)||(2075-2176)
[»] scaffold0028 (6 HSPs)
scaffold0028 (261-354)||(3095-3188)
scaffold0028 (287-355)||(135050-135119)
scaffold0028 (287-355)||(137519-137588)
scaffold0028 (287-355)||(139988-140057)
scaffold0028 (287-355)||(142457-142526)
scaffold0028 (287-355)||(144926-144995)
[»] scaffold0008 (1 HSPs)
scaffold0008 (261-354)||(135547-135640)
[»] scaffold0125 (4 HSPs)
scaffold0125 (78-130)||(1207-1259)
scaffold0125 (137-199)||(18201-18263)
scaffold0125 (62-175)||(28378-28491)
scaffold0125 (167-199)||(7314-7346)
[»] scaffold0086 (1 HSPs)
scaffold0086 (68-188)||(35587-35706)
[»] scaffold1439 (1 HSPs)
scaffold1439 (76-131)||(917-972)
[»] scaffold0200 (1 HSPs)
scaffold0200 (60-131)||(18419-18490)
[»] scaffold0031 (2 HSPs)
scaffold0031 (21-172)||(127461-127611)
scaffold0031 (287-355)||(56262-56331)
[»] scaffold1939 (1 HSPs)
scaffold1939 (110-172)||(1-63)
[»] scaffold0290 (1 HSPs)
scaffold0290 (78-128)||(916-966)
[»] scaffold0035 (2 HSPs)
scaffold0035 (20-125)||(39258-39363)
scaffold0035 (46-172)||(43903-44028)
[»] scaffold0877 (1 HSPs)
scaffold0877 (78-127)||(2187-2236)
[»] scaffold0628 (1 HSPs)
scaffold0628 (269-354)||(1102-1187)
[»] scaffold0394 (2 HSPs)
scaffold0394 (76-131)||(12891-12946)
scaffold0394 (106-175)||(7626-7695)
[»] scaffold1941 (1 HSPs)
scaffold1941 (273-339)||(66-132)
[»] scaffold0251 (1 HSPs)
scaffold0251 (280-354)||(20129-20202)
[»] scaffold0112 (1 HSPs)
scaffold0112 (78-131)||(23279-23332)
[»] scaffold0859 (1 HSPs)
scaffold0859 (268-348)||(4605-4685)
[»] scaffold0051 (1 HSPs)
scaffold0051 (60-128)||(31969-32036)
[»] scaffold1283 (1 HSPs)
scaffold1283 (273-328)||(537-592)
[»] scaffold0241 (2 HSPs)
scaffold0241 (273-328)||(2492-2547)
scaffold0241 (273-328)||(3110-3165)
[»] scaffold1766 (1 HSPs)
scaffold1766 (273-339)||(754-820)
[»] scaffold0632 (1 HSPs)
scaffold0632 (273-327)||(1093-1147)
[»] scaffold0515 (1 HSPs)
scaffold0515 (60-172)||(4860-4964)
[»] scaffold0306 (1 HSPs)
scaffold0306 (60-172)||(4860-4964)
[»] scaffold0293 (1 HSPs)
scaffold0293 (21-131)||(19455-19565)
[»] scaffold0111 (2 HSPs)
scaffold0111 (273-327)||(12603-12657)
scaffold0111 (273-328)||(5311-5366)
[»] scaffold0080 (1 HSPs)
scaffold0080 (273-347)||(21843-21917)
[»] scaffold0056 (1 HSPs)
scaffold0056 (269-354)||(67043-67129)
[»] scaffold0165 (1 HSPs)
scaffold0165 (106-175)||(31800-31869)
[»] scaffold0737 (2 HSPs)
scaffold0737 (275-354)||(5861-5941)
scaffold0737 (273-328)||(4783-4838)
[»] scaffold0123 (1 HSPs)
scaffold0123 (275-354)||(7205-7285)
[»] scaffold1633 (1 HSPs)
scaffold1633 (273-328)||(1133-1188)
[»] scaffold1434 (1 HSPs)
scaffold1434 (80-199)||(1449-1568)
[»] scaffold0407 (1 HSPs)
scaffold0407 (273-328)||(11343-11398)
[»] scaffold0207 (1 HSPs)
scaffold0207 (273-328)||(13461-13516)
[»] scaffold0077 (1 HSPs)
scaffold0077 (273-328)||(34267-34322)
[»] scaffold0064 (1 HSPs)
scaffold0064 (273-328)||(58674-58729)
[»] scaffold0256 (1 HSPs)
scaffold0256 (47-124)||(2005-2083)
[»] scaffold0117 (1 HSPs)
scaffold0117 (77-131)||(42514-42568)
[»] scaffold0802 (1 HSPs)
scaffold0802 (277-354)||(4753-4830)
[»] scaffold0174 (2 HSPs)
scaffold0174 (273-310)||(11318-11355)
scaffold0174 (273-310)||(5198-5235)
[»] scaffold0134 (1 HSPs)
scaffold0134 (287-355)||(38659-38728)
[»] scaffold0023 (2 HSPs)
scaffold0023 (287-355)||(95248-95317)
scaffold0023 (76-131)||(163175-163230)
[»] scaffold0019 (1 HSPs)
scaffold0019 (287-355)||(158622-158691)
[»] scaffold0232 (1 HSPs)
scaffold0232 (296-355)||(4176-4235)
[»] scaffold0020 (2 HSPs)
scaffold0020 (273-328)||(143539-143594)
scaffold0020 (273-328)||(169068-169123)
[»] scaffold1102 (1 HSPs)
scaffold1102 (137-199)||(2041-2103)
[»] scaffold0285 (1 HSPs)
scaffold0285 (273-310)||(19689-19726)
[»] scaffold0254 (2 HSPs)
scaffold0254 (287-355)||(21588-21657)
scaffold0254 (296-355)||(19119-19179)
[»] scaffold0146 (1 HSPs)
scaffold0146 (287-355)||(22926-22995)
[»] scaffold0047 (1 HSPs)
scaffold0047 (273-306)||(78992-79025)
[»] scaffold0695 (1 HSPs)
scaffold0695 (287-354)||(6782-6850)
[»] scaffold0589 (1 HSPs)
scaffold0589 (294-354)||(4333-4393)
[»] scaffold0075 (1 HSPs)
scaffold0075 (294-354)||(60843-60903)
[»] scaffold0065 (1 HSPs)
scaffold0065 (294-354)||(52588-52648)


Alignment Details
Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 76 - 355
Target Start/End: Complemental strand, 44822342 - 44822063
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||| ||||  | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44822342 cccaaatttgataagaaatatcacctattgttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 44822243  T
Q  176 gtaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaac 275  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44822242 gcaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaac 44822143  T
Q  276 aaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  44822142 aaccaattacaacttctaaacctaattcccaaatttccagaactacaacctaccacctgttaaatccaattttcataatc 44822063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 68 - 340
Target Start/End: Complemental strand, 24723680 - 24723408
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||  |||||||||   ||||| ||| |||||||||    
T  24723680 acccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattattaccttaattcatcatattacatactctttcaaca 24723581  T
Q  168 atcaaattgtaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctaca 267  Q
    ||||||||| |||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24723580 atcaaattgcaattaaaaaccataacttctttttaaaactctaacttcttttcacaaccctaacttcattaacatcttaatttcaacaatcaattctaca 24723481  T
Q  268 attaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaat 340  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| || |||||||| ||||||||||||||||    
T  24723480 attaaaacaaccaattacaacttctaaacataattctcaaatttccaaaactacaatctaccacctgttaaat 24723408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 60 - 343
Target Start/End: Complemental strand, 7052241 - 7051976
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||  ||  |||||||||  |||||||||| |    
T  7052241 tttcatctacccaaatcccaaatatgataggaaacttaacctatgattattttacaacctgaacaccaattattaccttaattcatcagattacctactc 7052142  T
Q  160 tttcaacaatcaaattgtaattc-aaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatc 258  Q
    ||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||                   |||||||||||||| ||||||||    
T  7052141 tttcaacaatcaaattgcaattcaaaaaccctaacttctttttaaaactctaacttct-------------------ttaacatcttaatttcaacaatc 7052061  T
Q  259 aattctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||| || |||||||||||||||||||    
T  7052060 aattctacaattaaaacaaccaattacaatttctaaacctaattcccaaatttctaaaactaaaatctaccacctgttaaatcca 7051976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 297139 - 297252
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  297139 aactctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaac 297238  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||| ||||    
T  297239 ctgaacatcgattc 297252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 28313132 - 28313245
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||||||||||||||||||| | |||||||   ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  28313132 aactctacgggaacagaccagtttctagccaaaaacgtaatttttcatccacccaaacctcaaatttgataggaaacttaacctatgattattccacaac 28313231  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||||||||    
T  28313232 ctgaacatcaattc 28313245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 197
Target Start/End: Complemental strand, 21188253 - 21188126
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    ||||||| ||||||||||||||||||| | || |||  |||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  21188253 acccaaatcccaaatttgataggaaacattacatattcttattctacaacctgaacatcaatttttatattaattcattggattacctacactttcaaca 21188154  T
Q  168 atcaaattgtaattcaaaaccctaacttct 197  Q
    ||||||||| |||| |||  ||||||||||    
T  21188153 atcaaattgcaatttaaa--cctaacttct 21188126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 8276260 - 8276148
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||    
T  8276260 aactctacgggaacagaccagttttcagccaaaaacccaatttttcatccaccaaaactccaaatttgataggaaacttaacctatgattaatctgcaac 8276161  T
Q  118 ctgaacatcaatt 130  Q
     || ||| |||||    
T  8276160 ttggacaccaatt 8276148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 38056942 - 38056831
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  38056942 aactctacgggaacagaccagttttcagccaaaaacccaatttttca-ccacccaaaccccaaatttgataggaaacttaacctatgattaatctgcaac 38056844  T
Q  118 ctgaacatcaatt 130  Q
     || ||| |||||    
T  38056843 ttggacaccaatt 38056831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 46197973 - 46197862
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |    
T  46197973 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctactc 46197874  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  46197873 ttt-aacaatcaa 46197862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 197
Target Start/End: Original strand, 8306414 - 8306564
Alignment:
Q  46 ccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcat 145  Q
    ||||||| ||||  ||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||  ||  |||||||||    
T  8306414 ccaaaaaaccaaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaatctgaacaccaattattaccttaattcat 8306513  T
Q  146 tggattacctacactttcaacaatcaaattgtaattcaaaaccctaacttct 197  Q
     ||||||||||| |||||||||||| |||| |||||  ||||||||| ||||    
T  8306514 cggattacctactctttcaacaatc-aattttaatttcaaaccctaatttct 8306564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 22350516 - 22350630
Alignment:
Q  83 ttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaattc 182  Q
    |||||||||||| | || ||| |||| |||||||||||||||||||||  ||| ||||||||||| ||||||||||| |||||||||||||||| |||||    
T  22350516 ttgataggaaacctcacttattattactctacaacctgaacatcaatttttatattaattcattgaattacctacaccttcaacaatcaaattgcaattc 22350615  T
Q  183 aaaaccctaacttct 197  Q
    |||||||||||||||    
T  22350616 aaaaccctaacttct 22350630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 22823419 - 22823265
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaa 179  Q
    ||||||||||||||| | ||||| | ||| |||||||||| |||||||| |   |  ||||||||| | ||||| ||||||||||| |||||||||| ||    
T  22823419 aatttgataggaaacattacctagggttactctacaacctaaacatcaactttcacattaattcatcgaattacttacactttcaagaatcaaattgcaa 22823320  T
Q  180 ttcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttc 234  Q
    |||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||    
T  22823319 ttcaaaaccctatcttcttttcaaaaccctaacctcttttcaaaaccctaacttc 22823265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 17902073 - 17901918
Alignment:
Q  18 aactctacgggaacagaccagtttccaa-ccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaa 116  Q
    |||||||||||||||||||||||| ||  ||||||| ||    ||||||| ||||||| |||||||||||||| |||||  |||||||||||||||||||    
T  17902073 aactctacgggaacagaccagttttcactccaaaaagccccaatttcatcaacccaaatcccaaatttgatagaaaactctacctatgattattctacaa 17901974  T
Q  117 cctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||||||| |||||  ||  ||| ||||| |||||| |||| ||||||||||||||    
T  17901973 cctgaacaccaattattaccttagttcatcggattatctactctttcaacaatcaa 17901918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 23194739 - 23194668
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23194739 tttcatctacccaaactccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 23194668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 29763899 - 29763749
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||||  ||     
T  29763899 tctacgggaacagaccagttttcactccaaaagccccaatttcatccacccaaatcccaaatttgataggaaactcaacttatgtttattctacagtcta 29763800  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  29763799 aacttcaattcttatgttaattcattgtattacctactcttt-aacaatcaa 29763749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 50001300 - 50001411
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| || ||||||||||||||||| ||| |||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||| |    
T  50001300 tttcatcaacccaaatccaaaatttgataggaaactcaacatatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactc 50001399  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  50001400 ttt-aacaatcaa 50001411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 22130252 - 22130181
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22130252 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaaccttaacatcaattc 22130181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 51324420 - 51324502
Alignment:
Q  261 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| ||  || ||||||||||||||||||||||||||||    
T  51324420 ttctactattaaaacaaccaattacaacttttaaacctaattcccaatttcccaaaactacaacctaccacctgttaaatcca 51324502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 21239282 - 21239159
Alignment:
Q  49 aaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattgg 148  Q
    ||||||| | |||||||| ||||||| || ||||||||||| |||||  ||||||||||||||||||| ||||||| |||||  ||  ||| ||||| ||    
T  21239282 aaaatcccaattttcatcaacccaaatcctaaatttgatagaaaactctacctatgattattctacaaactgaacaccaattattaccttagttcatcgg 21239183  T
Q  149 attacctacactttcaacaatcaa 172  Q
    ||||||||| ||||||||||||||    
T  21239182 attacctactctttcaacaatcaa 21239159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 45574230 - 45574175
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45574230 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 45574175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 7320730 - 7320637
Alignment:
Q  261 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||| |||||| |||||||||||||| ||||||| |||||||||||||  || |||||||| |||| ||||||||||| |||||||||||||    
T  7320730 ttctactattaaatcaaccaattacaacatctaaacataattcccaaattcccaaaactacaatctacaacctgttaaattcaattttcagaat 7320637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 20708268 - 20708149
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaa 179  Q
    ||||||||||||||| | ||||| | ||| |||||||||| |||||||| |   |  |||||| |||||||||| ||||||||||| |||||||||| ||    
T  20708268 aatttgataggaaacattacctagggttactctacaacctaaacatcaactttcacattaatttattggattacttacactttcaagaatcaaattgcaa 20708169  T
Q  180 ttcaaaaccctaacttcttt 199  Q
    ||||||||||||| ||||||    
T  20708168 ttcaaaaccctaatttcttt 20708149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 13880745 - 13880692
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13880745 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattc 13880692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 34392551 - 34392702
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac-ct 119  Q
    |||||||||| | ||| |||| || ||||||| |||||||| ||  |||||||| ||||||||  | |||||||| |||||||| |||||||||||  ||    
T  34392551 tctacgggaagaaacctgttttcagccaaaaacccaatttt-caagcacccaaatcccaaattcaaaaggaaactcaacctatgtttattctacaattct 34392649  T
Q  120 gaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||| ||| | | || ||||||||| |||||||||||| ||||||||||||||    
T  34392650 gaacctcattccttacgttaattcaatggattacctactctttcaacaatcaa 34392702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 6833990 - 6834105
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaat---tcattggattaccta 156  Q
    ||||||| ||| ||| |||||||||||||| |||||  ||||||||||||||||||||||||||| |||||  ||  ||| |   |||| ||||||||||    
T  6833990 tttcatcaaccaaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaacaccaattattaccttagttcatcatcggattaccta 6834089  T
Q  157 cactttcaacaatcaa 172  Q
    | ||||||||||||||    
T  6834090 ctctttcaacaatcaa 6834105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 22145889 - 22145788
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    |||| ||||||||||||  ||| |||||  ||||||||||| |||||||| ||||||||||||  ||  ||||||||||||||||||||| | |||||||    
T  22145889 accctaaccccaaattttgtagaaaactctacctatgattaatctacaacttgaacatcaattattactttaattcattggattacctactccttcaaca 22145790  T
Q  168 at 169  Q
    ||    
T  22145789 at 22145788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 197
Target Start/End: Original strand, 39061163 - 39061280
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaa 179  Q
    ||||||||||||||| | ||||| | ||| |||||||||| |||||||| |   |  ||||||||| ||||||| ||||||||||| |||||||||  ||    
T  39061163 aatttgataggaaacattacctagggttactctacaacctaaacatcaactttcacattaattcatcggattacttacactttcaagaatcaaattacaa 39061262  T
Q  180 ttcaaaaccctaacttct 197  Q
    ||||||||||||| ||||    
T  39061263 ttcaaaaccctaaattct 39061280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 355
Target Start/End: Original strand, 22350646 - 22350726
Alignment:
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||| || |||||||||| |||||||||||||||  || ||||||||||||| || |||||||| ||||||||||||||    
T  22350646 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaatc 22350726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 19676639 - 19676694
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  19676639 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctac 19676694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 13302847 - 13302910
Alignment:
Q  291 ctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||||||||||||||||  || ||||||||||||| || |||||||| |||||||||||||    
T  13302847 ctaaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaat 13302910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 16058437 - 16058383
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  16058437 aacaaccaattacaacttc-aaacctaattcccaaatttccataactacaacctac 16058383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 7702975 - 7703052
Alignment:
Q  98 acctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||| |||||||||||||||| ||||||||||   |   | || |||||||||||||||||||||||||||||||||    
T  7702975 acctaggattattctacaacctaaacatcaattttcacaatgatccattggattacctacactttcaacaatcaaatt 7703052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 45755468 - 45755529
Alignment:
Q  294 aacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||||||| |||||| ||| ||||||||||||| || ||||||||||| |||||||||||    
T  45755468 aacctaattctcaaattctcaaaactacaacctacaacttgttaaatccacttttcagaatc 45755529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 8276118 - 8276079
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaa 308  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  8276118 ttaaatcaaccaattacaacttctaaacctaattcccaaa 8276079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 21046173 - 21046118
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||| |||||||||||||  || |||||||||||||    
T  21046173 aacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctac 21046118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 38056801 - 38056762
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaa 308  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  38056801 ttaaatcaaccaattacaacttctaaacctaattcccaaa 38056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 42912977 - 42913032
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||||||||||| |||||  || |||||||||||||    
T  42912977 aacaaccaattacaacttcaaaacctaattcctaaattcccacaactacaacctac 42913032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 13989703 - 13989772
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  13989703 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 13989772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 14237766 - 14237697
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  14237766 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 14237697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 20633758 - 20633721
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaatt 310  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  20633758 aacaaccaattacaacttcaaaacctaattcccaaatt 20633721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 21243926 - 21243853
Alignment:
Q  99 cctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||||||||||||||||||||||||| |||||  ||   |||||||| |||||| |||| ||||| ||||||||    
T  21243926 cctatgattattctacaacctgaacaccaattattaacctaattcatcggattatctactctttctacaatcaa 21243853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 21474409 - 21474340
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  21474409 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 21474340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 23593055 - 23592986
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  23593055 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 23592986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 41373311 - 41373380
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  41373311 acttgtaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 41373380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 4595974 - 4595897
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||| ||||||||||||||||||||| |||||||||||        ||||||||||||| || |||||||| | |||||||||||    
T  4595974 ttaaatcaaccaattacaacttctaaatctaattcccaa--------aactacaacctacaacttgttaaattcgattttcagaat 4595897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 42697732 - 42697792
Alignment:
Q  294 aacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||| |||||  ||| ||||||||||||| || |||||||||||||| |||||||    
T  42697732 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaatccaattctcagaat 42697792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 21922614 - 21922545
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || | | ||||||| || |||||||||||||||||||||||    
T  21922614 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatc 21922545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 51083115 - 51083184
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||| ||||    
T  51083115 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcaaaatc 51083184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 355
Target Start/End: Original strand, 51476922 - 51477003
Alignment:
Q  275 caaccaattacaacttctaaacctaatt-cccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| |||| ||| |||||| ||||||| ||||||||  || |||||||| | || ||||||||||| ||||||||||||||    
T  51476922 caacaaattgcaatttctaaccctaatttcccaaattcccaaaactacaagccacaacctgttaaattcaattttcagaatc 51477003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 22823300 - 22823264
Alignment:
Q  180 ttcaaaaccctaacttcttttcaaaactctaacttct 216  Q
    |||||||||||||| |||||||||||| |||||||||    
T  22823300 ttcaaaaccctaacctcttttcaaaaccctaacttct 22823264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 48444341 - 48444401
Alignment:
Q  296 cctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||| ||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  48444341 cctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 48444401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 76 - 343
Target Start/End: Complemental strand, 1383864 - 1383597
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||  || |||||||||| ||||||||||| |||||||||||||||||    
T  1383864 cccaaatttgataggaaacttaacctatgattattctacaacctgaagaccaattattacgttaattcatcggattacctactctttcaacaatcaaatt 1383765  T
Q  176 gtaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaac 275  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  1383764 gcaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaatttctacaatcaattctacaattaaaac 1383665  T
Q  276 aaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  1383664 aaccaattacaacttctaaacctaattcccaaatttccaaaactacaacctaccacctgttaaatcca 1383597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 106 - 348
Target Start/End: Original strand, 24884231 - 24884473
Alignment:
Q  106 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaattcaaaaccctaacttcttttcaaaa 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24884231 ttattctataacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgcaattcaaaaccctaacttcttttcaaaa 24884330  T
Q  206 ctctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattccc 305  Q
     |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24884331 ttctaacttcttttcacaaacctaacttcattaatatcttaattccaacaatcaattctacaattaagacaaccaattacaacttctaaacctaattccc 24884430  T
Q  306 aaattttcagaactacaacctaccacctgttaaatccaatttt 348  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  24884431 aaattttcagaactacaacctaccacctgttaaatcgaatttt 24884473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 76 - 354
Target Start/End: Original strand, 22501700 - 22501979
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||| ||||| | || |||  |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22501700 cccaaatttgataagaaacatcacatattgttattccacaacttgaacatcaattcatatgttaattcattggattacctacactttcaacaaacaaatt 22501799  T
Q  176 gtaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaac 275  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  22501800 gcaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcgttaacatcttaattccaacaatcaattttacaattaaaac 22501899  T
Q  276 aaccaattacaacttctaaacctaa-ttcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||| ||||||||||| ||||| ||||||||||   | |||||||||| || || |||||||||||||| |||||||    
T  22501900 aaccaatcacaacttctaaccctaatttcccaaattcataaaactacaacccacaacatgttaaatccaattctcagaat 22501979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 76 - 354
Target Start/End: Original strand, 22509634 - 22509913
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||| ||||| | || |||  |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22509634 cccaaatttgataagaaacatcacatattgttattccacaacttgaacatcaattcatatgttaattcattggattacctacactttcaacaaacaaatt 22509733  T
Q  176 gtaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaac 275  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  22509734 gcaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcgttaacatcttaattccaacaatcaattttacaattaaaac 22509833  T
Q  276 aaccaattacaacttctaaacctaa-ttcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||| ||||||||||| ||||| ||||||||||   | |||||||||| || || |||||||||||||| |||||||    
T  22509834 aaccaatcacaacttctaaccctaatttcccaaattcataaaactacaacccacaacatgttaaatccaattctcagaat 22509913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 357716 - 357879
Alignment:
Q  180 ttcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaacc 279  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  357716 ttcaaaactctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaatttcaacaatcaattctacaattaaaacaacc 357815  T
Q  280 aattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||    
T  357816 aattacaacttctaaacctaattcccaaatttcaaaaactacaacctaccacctgttaaatcca 357879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 23338668 - 23338555
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  23338668 aactctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaac 23338569  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||| ||||    
T  23338568 ctgaacatcgattc 23338555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 13101001 - 13100890
Alignment:
Q  20 ctctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 119  Q
    |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  13101001 ctctacgggaacatgccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacagtct 13100902  T
Q  120 gaacatcaattc 131  Q
    ||||||| ||||    
T  13100901 gaacatcgattc 13100890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 68 - 197
Target Start/End: Original strand, 45535758 - 45535885
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    ||||||| ||||||||||| ||||||| | ||||||  |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  45535758 acccaaatcccaaatttgacaggaaacattacctattgttattctacaacctgaacatcaatttttatgttaattcattggattacctacactttcaaca 45535857  T
Q  168 atcaaattgtaattcaaaaccctaacttct 197  Q
    ||||||||| |||| |||  ||||||||||    
T  45535858 atcaaattgcaatttaaa--cctaacttct 45535885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 10684197 - 10684088
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||    
T  10684197 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctga 10684098  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  10684097 acatcgattc 10684088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 20261947 - 20262056
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||    
T  20261947 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctga 20262046  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  20262047 acatcgattc 20262056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 243
Target Start/End: Complemental strand, 25584511 - 25584347
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaa 179  Q
    ||||||||||||||| | ||||| | ||| |||||||||| |||||||| |   |  ||||||||| ||||||| ||||||||||| |||||||||||||    
T  25584511 aatttgataggaaacattacctagggttactctacaacctaaacatcaactttcacattaattcatcggattacttacactttcaagaatcaaattgtaa 25584412  T
Q  180 ttcaaaa-ccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatc 243  Q
    ||||||| |||||||||||||||| ||| |||||||||||||| ||||||||||||  |||||||    
T  25584411 ttcaaaacccctaacttcttttcacaaccctaacttcttttcaaaaccctaacttctataacatc 25584347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 18388442 - 18388328
Alignment:
Q  83 ttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaattc 182  Q
    |||||||||||| | || ||| |||| |||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||| |||||    
T  18388442 ttgataggaaacctcacttattattactctacaacctgaacatcaatttttatattaattcattggattacctacaccttcaacaatcaaattgcaattc 18388343  T
Q  183 aaaaccctaacttct 197  Q
    |||||||||||||||    
T  18388342 aaaaccctaacttct 18388328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 19647074 - 19647193
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||||||||| | ||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||    
T  19647074 cccaaatttgataggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattggattacctacattttcaacaatcaattt 19647173  T
Q  176 gtaattcaaaaccctaacttct 197  Q
    | ||||   |||||||||||||    
T  19647174 gcaatt--taaccctaacttct 19647193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 21072926 - 21072844
Alignment:
Q  49 aaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21072926 aaaacccaaattttcatccacccaaaccccaaatttgataggaaacttaacctatgattattccacaacctgaacatcaattc 21072844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 60 - 197
Target Start/End: Complemental strand, 149734 - 149598
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||  ||  ||||||||| ||||||||||| |    
T  149734 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactc 149635  T
Q  160 tttcaacaatcaaattgtaattcaaaaccctaacttct 197  Q
    ||||||||||| |||| |||||  ||||||||| ||||    
T  149634 tttcaacaatc-aattttaatttcaaaccctaatttct 149598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 25183974 - 25184124
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||  |||    
T  25183974 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagtctg 25184073  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  25184074 aacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 25184124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 18358195 - 18358084
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||| ||| |    
T  18358195 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacatactc 18358096  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  18358095 ttt-aacaatcaa 18358084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 188
Target Start/End: Complemental strand, 28345277 - 28345136
Alignment:
Q  46 ccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcat 145  Q
    ||||||| |||| |||| ||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||| || | |||||   |   | ||||||    
T  28345277 ccaaaaacccaaatttt-atctacctaaatcccaaatttgataggaaacttaacctatgattattctacaacctcaataacaattttcaccatgattcat 28345179  T
Q  146 tggattacctacactttcaacaatcaaattgtaattcaaaacc 188  Q
    ||||||||||||||||| || |||||||||| |||||||||||    
T  28345178 tggattacctacacttttaaaaatcaaattgaaattcaaaacc 28345136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 197
Target Start/End: Complemental strand, 20006192 - 20006063
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcat--atgttaattcattggattacctacactttcaa 165  Q
    ||||||| ||||||||||||||||||| | ||||||  |||||||||||| ||||||||| ||  |  || |||||||||| ||||||||||||||||||    
T  20006192 acccaaatcccaaatttgataggaaacattacctattgttattctacaacatgaacatcattttttttatattaattcattcgattacctacactttcaa 20006093  T
Q  166 caatcaaattgtaattcaaaaccctaacttct 197  Q
    ||||||||||| ||||||||  ||||||||||    
T  20006092 caatcaaattgcaattcaaa--cctaacttct 20006063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 12626644 - 12626548
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||||||||  |||||||||| ||| |||| |||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||||||||||    
T  12626644 cccaaattcaataggaaactcaacttatgtttattctacaacctgaacatcaattcttctgttaattcatcggattacctactctttcaacaatcaa 12626548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 20590509 - 20590438
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  20590509 tttcatctacccaaaccccaaatttgatagaaaacttaacctatgattattctaccacctgaacatcaattc 20590438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 41301156 - 41301085
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41301156 tttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaacatcaattc 41301085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 21081197 - 21081086
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| || ||||||||||||||||| ||| |||| |||||||||| ||||||| ||||||| |||||||||||||||  |||||||| |    
T  21081197 tttcatcaacccaaatcctaaatttgataggaaactcaacttatgtttattctacagcctgaacttcaattcttatgttaattcattgttttacctactc 21081098  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  21081097 ttt-aacaatcaa 21081086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 21915448 - 21915544
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattaccta 156  Q
    ||||||| ||| ||| ||||||||| |||||||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||    
T  21915448 tttcatcaacctaaatcccaaattttataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattaccta 21915544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 45528383 - 45528500
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgt 177  Q
    ||||||||| ||||||| | ||||||  |||||||| ||||||||||||||||   ||||||||||||| |||||| ||||||||||||||||||||||     
T  45528383 caaatttgacaggaaacattacctattgttattctataacctgaacatcaattttaatgttaattcatttgattacatacactttcaacaatcaaattgc 45528482  T
Q  178 aattcaaaaccctaacttct 197  Q
    |||| |||  ||||||||||    
T  45528483 aatttaaa--cctaacttct 45528500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 354
Target Start/End: Original strand, 25142133 - 25142212
Alignment:
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||||||||||||||||||||||||||||||||  || ||||||||||||| || |||||||| |||||||||||||    
T  25142133 caaccaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaat 25142212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 45535657 - 45535726
Alignment:
Q  97 aacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaac 166  Q
    |||||||  |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  45535657 aacctattgttattctacaacctgaacatcaatttttatgttaattcattggattacctacactttcaac 45535726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 43707258 - 43707203
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43707258 cccaaatttgataggaaacttaacctatgattattctacaacttgaacatcaattc 43707203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 175
Target Start/End: Complemental strand, 28652763 - 28652664
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||| |||| |||||   |||||||||||||||| |||||||||||||||  ||  ||||||||||||||||||||| |||| |||||| |||||    
T  28652763 cccaaattttatagaaaactcttcctatgattattctactacctgaacatcaattattaccttaattcattggattacctactcttttaacaattaaatt 28652664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 36734664 - 36734610
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 130  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  36734664 cccaaatttgataggaaacttaacctaagattattctacaacctgaacaccaatt 36734610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 3539760 - 3539845
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||| ||||||||||||||||||||||||||||| ||||||   | ||||||||||||| || |||||||| | |||||||||||    
T  3539760 ttaaatcaaccaattacaacttctaaacctaattctcaaattccaaaaactacaacctacaacttgttaaattcgattttcagaat 3539845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 355
Target Start/End: Complemental strand, 18388312 - 18388232
Alignment:
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||| || |||||||||| | |||||||||||||  || ||||||||||||| || |||||||||||||||||||||||    
T  18388312 caaccatttgcaacttctaaccataattcccaaattcccaaaactacaacctacaacttgttaaatccaattttcagaatc 18388232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 7187267 - 7187322
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||    
T  7187267 cccaaatttgttaggaaacttaatctatgattattctacaaccagaacatcaattc 7187322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 22173188 - 22173133
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  22173188 cccaaatttgttagaaaacataacctatgattattctacaacctgaacatcaattc 22173133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 280 - 355
Target Start/End: Original strand, 22259974 - 22260048
Alignment:
Q  280 aattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||| |||||||||||||||   | ||||||||||||| ||||||||||| ||||||||||||||    
T  22259974 aattacaacttctaagcctaattcccaaattccta-aactacaacctacaacctgttaaattcaattttcagaatc 22260048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 24516114 - 24516180
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaa 339  Q
    ||||||||||||||||||| ||||||||||||||||||  || ||||||||||||| || |||||||    
T  24516114 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgttaaa 24516180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 31345906 - 31346016
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| |||||||  ||||||||||||||||||| |||||||| |||||||| | ||||    
T  31345906 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaacccaaataccaaatttgataggaaactcaacctatgtttattctatagcctg 31346005  T
Q  121 aacatcaattc 131  Q
    ||| |||||||    
T  31346006 aacttcaattc 31346016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 355
Target Start/End: Original strand, 19358820 - 19358901
Alignment:
Q  275 caaccaattacaacttctaaacctaatt-cccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||||||||||||||||| ||||||| ||||||||  || |||||||||| || || |||||||| ||||||||||||||    
T  19358820 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacttgttaaattcaattttcagaatc 19358901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 14183686 - 14183582
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    |||||||  |||||||||||||||||||  |||||||||||||| |||||||||||| |||||  ||   || ||||| |||||| |||| ||||| |||    
T  14183686 acccaaattccaaatttgataggaaactctacctatgattattccacaacctgaacaccaattattaaactagttcatcggattatctaccctttctaca 14183587  T
Q  168 atcaa 172  Q
    |||||    
T  14183586 atcaa 14183582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 5031253 - 5031198
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  5031253 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 5031198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 9975857 - 9975912
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  9975857 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 9975912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 17307414 - 17307469
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  17307414 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 17307469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 22251572 - 22251517
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  22251572 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 22251517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 24780964 - 24780909
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  24780964 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 24780909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 27852605 - 27852676
Alignment:
Q  283 tacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||||||||| ||||||||||||||  || ||| ||||||||| || |||||||| |||||||||||||    
T  27852605 tacaacttctaaatctaattcccaaattcccaaaacaacaacctacaacttgttaaattcaattttcagaat 27852676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 31521018 - 31521063
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||| | |||||||||||||||||||||||||||||||||||    
T  31521018 cccaaattagttaggaaacttaacctatgattattctacaacctga 31521063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 19201324 - 19201269
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||   | |||||||||||||    
T  19201324 aacaaccaattacaacttcaaaacctaattcccaaattcctataactacaacctac 19201269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 27484601 - 27484546
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||| |||||||||||||  || |||||||||||||    
T  27484601 aacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctac 27484546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 40912248 - 40912303
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||| ||||||||| ||||||||||||||||||  || |||||||||||||    
T  40912248 aacaaccaactacaacttcaaaacctaattcccaaattcccataactacaacctac 40912303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 23801355 - 23801429
Alignment:
Q  98 acctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||||| |||||||||||||||||||| || ||  ||  ||||||||| || |||||||| ||||||||||||||    
T  23801355 acctattattattctacaacctgaacaccagttattaccttaattcatcgggttacctactctttcaacaatcaa 23801429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 36841192 - 36841258
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaa 339  Q
    ||||||||||||||||||| |||||||||| | |||||  || ||||||||||||| || |||||||    
T  36841192 aacaaccaattacaacttcaaaacctaatttctaaattcccataactacaacctacaacatgttaaa 36841258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 18809780 - 18809849
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  18809780 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 18809849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 23711338 - 23711269
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  23711338 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 23711269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 28577942 - 28578011
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  28577942 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 28578011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 32038822 - 32038753
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  32038822 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 32038753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 5986125 - 5986185
Alignment:
Q  294 aacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||| |||||  ||| ||||| ||||||| || ||||||||||||||||||||||    
T  5986125 aacctaattctcaaatcctcaaaactataacctacaacttgttaaatccaattttcagaat 5986185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 14179938 - 14179886
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 130  Q
    |||||||||||||||||   |||||||||||||| |||||||||||| |||||    
T  14179938 caaatttgataggaaacactacctatgattattccacaacctgaacaccaatt 14179886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 22690585 - 22690645
Alignment:
Q  296 cctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  22690585 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 22690645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 9785489 - 9785548
Alignment:
Q  296 cctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||| ||| ||||| ||| ||| || | |||||||||||||||||||||    
T  9785489 cctaattcccaaattctcaaaactaaaacttacaacatattaaatccaattttcagaatc 9785548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 24436576 - 24436631
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||| |||||||||||| |||||||||| |||||||  || |||||||||||||    
T  24436576 aacaactaattacaacttcaaaacctaatttccaaattcccataactacaacctac 24436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 37270627 - 37270682
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||| ||||||||||| |||| |||||| |||||| ||| |||||||||||||    
T  37270627 aacaacccattacaacttcaaaacttaattctcaaattctcataactacaacctac 37270682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 18390326 - 18390258
Alignment:
Q  285 caacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||| |||||||||||||||  || ||||||||| || ||| |||||||| | |||||||||||    
T  18390326 caacttctaatcctaattcccaaattcccaaaactacaacata-cacttgttaaattctattttcagaat 18390258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 23131699 - 23131768
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||| ||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  23131699 acttttaaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 23131768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 23134166 - 23134235
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||| ||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  23134166 acttttaaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 23134235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 23136405 - 23136474
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || | | ||||||| || |||||||||||||||||||||||    
T  23136405 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatc 23136474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 24897520 - 24897451
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  24897520 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 24897451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 24900003 - 24899934
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  24900003 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 24899934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 24902480 - 24902411
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  24902480 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 24902411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 24904957 - 24904888
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  24904957 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 24904888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 24907432 - 24907363
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  24907432 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 24907363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 26508694 - 26508763
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || ||||||||||||||| |||||||    
T  26508694 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaatc 26508763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 34401847 - 34401778
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||| ||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  34401847 acttttaaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 34401778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 39683153 - 39683222
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  39683153 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaattttcagaatc 39683222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 22695181 - 22695241
Alignment:
Q  296 cctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||| ||| || ||| ||||||| || ||||||||| |||||||||||||    
T  22695181 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatcaaattttcagaatc 22695241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 26506216 - 26506284
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || ||||||||||||||| ||||||    
T  26506216 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaat 26506284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 27920089 - 27920021
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || ||||||||||||||| ||||||    
T  27920089 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaat 27920021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 76 - 307
Target Start/End: Original strand, 14274063 - 14274294
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14274063 cccaaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 14274162  T
Q  176 gtaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaac 275  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14274163 gcaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacaccttaattccaacaatcaattctacaattaaaac 14274262  T
Q  276 aaccaattacaacttctaaacctaattcccaa 307  Q
    ||| ||||||||||||||||||||||||||||    
T  14274263 aacaaattacaacttctaaacctaattcccaa 14274294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 60 - 231
Target Start/End: Complemental strand, 12754893 - 12754721
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||  |||||||||  |||||||||| |    
T  12754893 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattattactttaattcatcagattacctactc 12754794  T
Q  160 tttcaacaatcaaattgtaattc-aaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaac 231  Q
    ||||||||||||||||| ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  12754793 tttcaacaatcaaattgcaattcaaaaacccaaacttctttttaaaactctaacttcttttcacaaccctaac 12754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 14188563 - 14188449
Alignment:
Q  17 aaactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaa 116  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14188563 aaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaa 14188464  T
Q  117 cctgaacatcaattc 131  Q
    | |||||||||||||    
T  14188463 cttgaacatcaattc 14188449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 76 - 304
Target Start/End: Complemental strand, 708733 - 708523
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||  ||  ||||| |||   ||| ||||| |||||||||||||||||    
T  708733 cccaaatttgataggaaacttaacctatgattattctacaacctaaacaccaattattaccttaatccatcatattgcctactctttcaacaatcaaatt 708634  T
Q  176 gtaattcaaaa-ccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaa 274  Q
    | |||| |||| ||||||||||||||||||||||||||||||||                   |||||||||||| ||||||||||||||||||||||||    
T  708633 gcaatttaaaaaccctaacttcttttcaaaactctaacttcttt-------------------aacatcttaatttcaacaatcaattctacaattaaaa 708553  T
Q  275 caaccaattacaacttctaaacctaattcc 304  Q
    ||||||||||||||||||||||||||||||    
T  708552 caaccaattacaacttctaaacctaattcc 708523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 47974999 - 47974874
Alignment:
Q  218 ttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaa 317  Q
    |||| |||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||    
T  47974999 ttcaaaaccctaacttcattagcatcttaatttcaacaatcaactctacaattaaaacaaccaattacaacttctaaacataattcccaaatttccaaaa 47974900  T
Q  318 ctacaacctaccacctgttaaatcca 343  Q
    ||||||||||||||||||||||||||    
T  47974899 ctacaacctaccacctgttaaatcca 47974874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 11661889 - 11662002
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  11661889 aactctacgggaacagaccagtttctagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctataattagtctacaac 11661988  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||||||||    
T  11661989 ctgaacatcaattc 11662002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 16108127 - 16108014
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||     
T  16108127 aactctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaat 16108028  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||| ||||    
T  16108027 ctgaacatcgattc 16108014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 23664387 - 23664278
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  23664387 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 23664288  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  23664287 acatcgattc 23664278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 60 - 196
Target Start/End: Complemental strand, 47975119 - 47974983
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| |||||||  ||||||||||||| |||||||| ||||||||||||||||||||||||| |||||  ||  ||||||||| ||||||||||  |    
T  47975119 tttcatctacccaaattccaaatttgatagaaaacttaatctatgattattctacaacctgaacaccaattattaccttaattcatcggattacctaatc 47975020  T
Q  160 tttcaacaatcaaattgtaattcaaaaccctaacttc 196  Q
    ||||||||||||||||| |||||||||||||||||||    
T  47975019 tttcaacaatcaaattgcaattcaaaaccctaacttc 47974983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 11303975 - 11304084
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||| ||||    
T  11303975 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaacaccaaatttgataggaaactcaacctatgtttattctacaatctga 11304074  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  11304075 acatcgattc 11304084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 29797338 - 29797447
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||    
T  29797338 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctga 29797437  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  29797438 acatcgattc 29797447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 29801157 - 29801266
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||    
T  29801157 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctga 29801256  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  29801257 acatcgattc 29801266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 17070560 - 17070448
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||| ||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  17070560 aactctacgggagcagactagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattaatctgcaac 17070461  T
Q  118 ctgaacatcaatt 130  Q
     || ||| |||||    
T  17070460 ttggacaccaatt 17070448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 60 - 188
Target Start/End: Original strand, 19195016 - 19195144
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||  |   | |||||||||||||| |||||    
T  19195016 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaatctgaataacaattctcaccatgattcattggattacatacac 19195115  T
Q  160 tttcaacaatcaaattgtaattcaaaacc 188  Q
    |||||| |||||||||| |||||||||||    
T  19195116 tttcaaaaatcaaattgaaattcaaaacc 19195144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 46 - 188
Target Start/End: Original strand, 37539259 - 37539400
Alignment:
Q  46 ccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcat 145  Q
    |||||||||||| ||| |||| |||||||  |||||||||||||||||||||||||| ||||||||||||||||||| | |||||   |   | ||||||    
T  37539259 ccaaaaatccaaattt-catctacccaaattccaaatttgataggaaacttaacctaagattattctacaacctgaataacaattttcaccatgattcat 37539357  T
Q  146 tggattacctacactttcaacaatcaaattgtaattcaaaacc 188  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  37539358 tggattacctacactttcaacaatcaaattgaaattctaaacc 37539400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 42566042 - 42565945
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||||||| | ||||||  |||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||    
T  42566042 caaatttgataggaaacattacctattgttattctacaacctgaacatcaatttctatgttaattcattggattacgtacactttcaacaatcaaatt 42565945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 4325921 - 4325992
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4325921 tttcatccacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 4325992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 14105654 - 14105583
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14105654 tttcatcaacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 14105583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 14415671 - 14415600
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14415671 tttcatcaacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 14415600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 16550230 - 16550119
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||| ||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||| |    
T  16550230 tttcatcaacccaaatcccaaatttgatagaaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactc 16550131  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  16550130 ttt-aacaatcaa 16550119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 16615432 - 16615543
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||| ||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||| |    
T  16615432 tttcatcaacccaaatcccaaatttgatagaaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactc 16615531  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  16615532 ttt-aacaatcaa 16615543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 32160428 - 32160317
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| | ||||| | |||||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |    
T  32160428 tttcatcaatccaaatctcaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctactc 32160329  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  32160328 ttt-aacaatcaa 32160317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 261 - 355
Target Start/End: Complemental strand, 15095773 - 15095679
Alignment:
Q  261 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||| |||||| |||| |||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||||| ||||||||||||||    
T  15095773 ttctactattaaatcaactaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatc 15095679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 261 - 355
Target Start/End: Original strand, 15140129 - 15140223
Alignment:
Q  261 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||| |||||| |||||||||||||||| |||||||||||||||||||  || ||||||||||||| ||||||||||| ||||||||||||||    
T  15140129 ttctactattaaatcaaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatc 15140223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 197
Target Start/End: Original strand, 33060271 - 33060398
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    ||||||| |||||||| |||| ||||| | ||||||  ||||||||| |||||||||||||||  ||| ||||||| ||||||| |||||||||||||||    
T  33060271 acccaaatcccaaattcgatatgaaacattacctattgttattctacgacctgaacatcaatttttatattaattctttggattgcctacactttcaaca 33060370  T
Q  168 atcaaattgtaattcaaaaccctaacttct 197  Q
    ||||||||| ||||||||  ||||||||||    
T  33060371 atcaaattgcaattcaaa--cctaacttct 33060398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 13315349 - 13315197
Alignment:
Q  20 ctctacgggaacagaccagtttcca-accaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacc 118  Q
    ||||||| |||||||||||||| ||  ||||||| || |  ||||||| ||||||| |||||||||||||| |||||  |||||||||||||||||||||    
T  13315349 ctctacgagaacagaccagttttcactccaaaaacccca-atttcatcaacccaaatcccaaatttgatagaaaactctacctatgattattctacaacc 13315251  T
Q  119 tgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||||| |||||  |   |||||||||||| |||||||| ||||||||||||||    
T  13315250 tgaacaccaattatttccttaattcattgggttacctactctttcaacaatcaa 13315197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 17505192 - 17505120
Alignment:
Q  59 ttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17505192 ttttcatctacccaaactccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattc 17505120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 17548022 - 17548094
Alignment:
Q  59 ttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17548022 ttttcatctacccaaactccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattc 17548094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 44190443 - 44190372
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44190443 tttcatctacccaaatcccacatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 44190372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 198
Target Start/End: Original strand, 21661099 - 21661217
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaa 179  Q
    ||||||||||||||| | ||||| | ||| |||||||||| |||||||| |   |  ||||||||||||||||| ||||||||||| |||||||||| ||    
T  21661099 aatttgataggaaacattacctagggttactctacaacctaaacatcaactttcacattaattcattggattacttacactttcaagaatcaaattgcaa 21661198  T
Q  180 ttcaaaaccctaacttctt 198  Q
    |||||||||||||||||||    
T  21661199 ttcaaaaccctaacttctt 21661217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 29052394 - 29052299
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||| |||||||||| |||| ||||||||| |||| |||||||||    
T  29052394 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattaattgaattacctactcttt-aacaatcaa 29052299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 13256507 - 13256589
Alignment:
Q  49 aaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| | |||||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  13256507 aaaatcccaattttcatcaacccaaatcccaaatttgataggaaacttatcctatgattatcctacaacttgaacatcaattc 13256589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 13648107 - 13648178
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||| ||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  13648107 tttcatctacctaaatcccaaatttgataggaaatttaacctatgattattctacaacctaaacatcaattc 13648178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 354
Target Start/End: Complemental strand, 13698761 - 13698682
Alignment:
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||||||||  || ||| ||||||||||||||||||    
T  13698761 caaccaattacaacttctaaccctaattcccaaatttccaaaactacaacctaaaacatgtcaaatccaattttcagaat 13698682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 16462910 - 16462965
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16462910 cccaaatttgataggaaacttaatctatgattattctacaacctgaacatcaattc 16462965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 25942312 - 25942366
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 130  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25942312 cccaaatttgataggaaacttaacctaagattattctacaacctgaacatcaatt 25942366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 38295413 - 38295538
Alignment:
Q  46 ccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcat 145  Q
    ||||||| |||||||| || ||||||||| ||||||||  ||||||||||  |||||||||||||||||| |||||||| |||||  ||  ||| |||||    
T  38295413 ccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactctacctatgattattctacatcctgaacaccaattattaccttacttcat 38295511  T
Q  146 tggattacctacactttcaacaatcaa 172  Q
     ||||||||||| ||| ||||||||||    
T  38295512 cggattacctactcttgcaacaatcaa 38295538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 19282870 - 19282982
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| | |||||  ||||||||||||| |||||  ||||||||||||||||||||||||| | |||||  ||  ||| ||||| ||||||||||| |    
T  19282870 tttcatcaatccaaattccaaatttgatagaaaactctacctatgattattctacaacctgaagaccaattattaccttagttcatcggattacctactc 19282969  T
Q  160 tttcaacaatcaa 172  Q
    |||||||||||||    
T  19282970 tttcaacaatcaa 19282982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 1856627 - 1856556
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||| |||||||    
T  1856627 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattc 1856556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 268 - 347
Target Start/End: Complemental strand, 8135366 - 8135287
Alignment:
Q  268 attaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattt 347  Q
    |||||| ||||||||||||||||||||||||||||| ||||||   | ||||||||||||| ||||||||||| ||||||    
T  8135366 attaaatcaaccaattacaacttctaaacctaattctcaaattcctaaaactacaacctacaacctgttaaattcaattt 8135287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 39431406 - 39431343
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  39431406 acccaaatcccatatttgataggaaacataacatatgattattctacaacctgaacatcaattc 39431343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 277 - 355
Target Start/End: Original strand, 12557853 - 12557931
Alignment:
Q  277 accaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||| |||||||||||||||||| |||||||  || ||||||||||||| ||||||||||| ||||||| ||||||    
T  12557853 accaatttcaacttctaaacctaatttccaaattcccaaaactacaacctacaacctgttaaattcaatttttagaatc 12557931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 13917838 - 13917728
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| ||||| | |||||||||||||||||||| |||||||| |||||||||| ||||    
T  13917838 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaacccagatcccaaatttgataggaaactcaacctatgtttattctacagcctg 13917739  T
Q  121 aacatcaattc 131  Q
    ||| |||||||    
T  13917738 aacttcaattc 13917728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 14219008 - 14218939
Alignment:
Q  285 caacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||| || |||||||| |||||||||||||    
T  14219008 caacttctaaacctaattccaaaattctcaaaactacaacctacaacttgttaaattcaattttcagaat 14218939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 35771554 - 35771485
Alignment:
Q  285 caacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||||||||||||||||||||||| || ||||||||||||| || |||||||| | |||||||||||    
T  35771554 caacttctaaacctaattcccaaatttccaaaactacaacctacaacttgttaaattcgattttcagaat 35771485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 13864573 - 13864518
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||    
T  13864573 cccaaatttgttaggaaacttaacctatgattattatacaatctgaacatcaattc 13864518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 20620214 - 20620269
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  20620214 aacaaccaattacaacttcaaaacctaattcccaaatttccataactacaacctac 20620269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 12127287 - 12127221
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaa 339  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||||| ||||||| || |||||||    
T  12127287 aacaaccaattacaacttcaaaacctaattcccaaatttccataactaaaacctacaacatgttaaa 12127221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 13132449 - 13132371
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattt 347  Q
    ||||| ||||| ||||||||||||||||||||||||||||||  || |||||| |||||| || |||||||| ||||||    
T  13132449 ttaaatcaaccgattacaacttctaaacctaattcccaaattcccaaaactacgacctacaacttgttaaattcaattt 13132371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 355
Target Start/End: Original strand, 11054642 - 11054723
Alignment:
Q  275 caaccaattacaacttctaaacctaatt-cccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||||||||||||| ||| ||||||| ||||||||  || || |||||||||| ||||||||||| ||||||||||||||    
T  11054642 caaccaattacaacttataaccctaatttcccaaattcccaaaattacaacctacaacctgttaaattcaattttcagaatc 11054723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 18455797 - 18455744
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  18455797 caaatttgttaggaaacttaagctataattattctacaacctgaacatcaattc 18455744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 18570430 - 18570581
Alignment:
Q  20 ctctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaa-cc 118  Q
    ||||||||||| | ||| |||| || ||||||| |||||||| || ||||||||| ||||||||  | |||||| | |||||||| |||||||||||  |    
T  18570430 ctctacgggaagaaacctgttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaagaggaaattcaacctatgtttattctacaattc 18570528  T
Q  119 tgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||||| ||| | | || ||||||||| ||| |||||||| ||||||||||||||    
T  18570529 tgaacctcattccttacgttaattcaatgg-ttacctactctttcaacaatcaa 18570581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 4071759 - 4071826
Alignment:
Q  285 caacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcaga 352  Q
    ||||||||||||||||||| |||||   || ||||||||||||| || ||||||||||||||||||||    
T  4071759 caacttctaaacctaattctcaaatccccaaaactacaacctacaacttgttaaatccaattttcaga 4071826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 8851283 - 8851228
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||||    
T  8851283 aacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctac 8851228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 10277255 - 10277310
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||    
T  10277255 aacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctac 10277310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 12323054 - 12322999
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||| ||||||||| ||||||||||||||||||| || |||||||||||||    
T  12323054 aacaaccaagtacaacttcaaaacctaattcccaaatttccataactacaacctac 12322999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 12465384 - 12465329
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  12465384 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 12465329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 13147596 - 13147541
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  13147596 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 13147541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 15289044 - 15289111
Alignment:
Q  285 caacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcaga 352  Q
    |||||| |||||||||||| |||||  ||| ||||||||||||| || ||||||||||||||||||||    
T  15289044 caacttttaaacctaattctcaaatcctcaaaactacaacctacaacttgttaaatccaattttcaga 15289111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 41284963 - 41285033
Alignment:
Q  277 accaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattt 347  Q
    |||||||| |||||||||||||||||||||||||   | ||||||||||||  |||| |||||||||||||    
T  41284963 accaattataacttctaaacctaattcccaaattcctaaaactacaacctataacctattaaatccaattt 41285033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 12754719 - 12754666
Alignment:
Q  290 tctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    ||||||| |||||||||||||| ||  |||||||||||||||||||||||||||    
T  12754719 tctaaacataattcccaaatttccattactacaacctaccacctgttaaatcca 12754666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 48807454 - 48807369
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||| ||||||||||||||||||  ||| ||||||||||||  || |||||||| |||| || |||||||| | |||||||||||    
T  48807454 ttaaatcaaccaattacaacttctgtaccaaattcccaaattcccaaaactacaatctacaacttgttaaattcgattttcagaat 48807369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 33002078 - 33002126
Alignment:
Q  262 tctacaattaaaacaaccaattacaacttctaaacctaattcccaaatt 310  Q
    ||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  33002078 tctactattacaacaaccaattacaacttctaaccctaattcccaaatt 33002126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 8931034 - 8930883
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    |||||||||| | ||  |||| || |||||||  |||||||||| ||||||||| | ||||||  | | |||||| |||||||| ||||| ||||| |||    
T  8931034 tctacgggaagaaacatgttttcagccaaaaactcaatttttcaaccacccaaatctcaaattcaaaaagaaactcaacctatgtttattatacaatctg 8930935  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||  ||| | | |  ||||||||| ||| |||||||| ||||||||||||||    
T  8930934 aagctcattcctttcgttaattcaatggtttacctactctttcaacaatcaa 8930883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 14180522 - 14180467
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||| |||||||||||||  || |||||||||||||    
T  14180522 aacaaccaattacaacttcaaaacataattcccaaattcccataactacaacctac 14180467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 15623950 - 15624021
Alignment:
Q  276 aaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattt 347  Q
    |||||||||||||| ||||||||||||| ||||||  || |||||||| |||| |||| |||||| ||||||    
T  15623950 aaccaattacaactcctaaacctaattctcaaattcccaaaactacaaactacaacctattaaattcaattt 15624021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 20214075 - 20214130
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||| |||||||||||||  || |||||||||||||    
T  20214075 aacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctac 20214130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 32433713 - 32433658
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||| ||||||  || |||||||||||||    
T  32433713 aacaaccaattacaacttcaaaacctaattcacaaattcacataactacaacctac 32433658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 36300907 - 36300761
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac-ct 119  Q
    |||||||||| | ||  |||| || ||||||| ||||||||  ||| ||||||| || |||||  | |||||||| |||||||| |||||||||||  ||    
T  36300907 tctacgggaagaaacttgttttcagccaaaaacccaattttcaatc-acccaaatcctaaattcaaaaggaaactcaacctatgtttattctacaattct 36300809  T
Q  120 gaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    |||| ||| | | || ||||||||| |||||||||||| |||||||||    
T  36300808 gaacctcactccttacgttaattcaatggattacctactctttcaaca 36300761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 343
Target Start/End: Complemental strand, 36685246 - 36685199
Alignment:
Q  296 cctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||    
T  36685246 cctaattcccaaatttccaaaactacaacctacaacctgttaaatcca 36685199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 46386212 - 46386157
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||| ||||||  || |||||||||||||    
T  46386212 aacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctac 46386157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 457160 - 457229
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  457160 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 457229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 326
Target Start/End: Original strand, 12372202 - 12372255
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacct 326  Q
    ||||||||||||||||||| ||||||||||| ||||||  || |||||||||||    
T  12372202 aacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacct 12372255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 13870183 - 13870252
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  13870183 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 13870252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 15376038 - 15375969
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  15376038 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 15375969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 16460146 - 16460077
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  16460146 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 16460077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 17070425 - 17070384
Alignment:
Q  262 tctacaattaaaacaaccaattacaacttctaaacctaattc 303  Q
    |||||| ||||| |||||||||||||||||||||||||||||    
T  17070425 tctacacttaaatcaaccaattacaacttctaaacctaattc 17070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 20384448 - 20384379
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  20384448 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 20384379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 41523757 - 41523826
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  41523757 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 41523826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 41526219 - 41526288
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  41526219 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 41526288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 18628412 - 18628472
Alignment:
Q  296 cctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  18628412 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 18628472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 11067396 - 11067451
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||| || || ||||||||||||||||||  || |||||||||||||    
T  11067396 aacaaccaattactacatcaaaacctaattcccaaattcccataactacaacctac 11067451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 16410897 - 16410966
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||| ||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  16410897 acttttaaccctaattccaaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 16410966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 27217699 - 27217767
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  27217699 acttttaaccctaattcccaaattctcaaaaacta-aacctacaacatgttaaatccaattttcagaatc 27217767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 32126328 - 32126397
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||| ||||||    
T  32126328 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatc 32126397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 18641118 - 18641178
Alignment:
Q  296 cctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||| ||| || ||| ||||||| || | |||||||||||||||||||||    
T  18641118 cctaattcccaaattctcaaaaactaaaacctacaacatattaaatccaattttcagaatc 18641178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 134
Target Start/End: Original strand, 23557404 - 23557432
Alignment:
Q  106 ttattctacaacctgaacatcaattcata 134  Q
    |||||||||||||||||||||||||||||    
T  23557404 ttattctacaacctgaacatcaattcata 23557432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 76 - 307
Target Start/End: Complemental strand, 30138295 - 30138064
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  30138295 cccaaatttgtttggaaacttaacctatgattattctacaacctgaacatcatatcatatgttaattcattggattgcctacactttcaacaatcaaatt 30138196  T
Q  176 gtaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaac 275  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30138195 gcaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaac 30138096  T
Q  276 aaccaattacaacttctaaacctaattcccaa 307  Q
    ||||||||||||||||||||||||||||||||    
T  30138095 aaccaattacaacttctaaacctaattcccaa 30138064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 106 - 343
Target Start/End: Original strand, 31456721 - 31456958
Alignment:
Q  106 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaattcaaaaccctaacttcttttcaaaa 205  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  31456721 ttattctacaacctgaacatcaattcatatgttaattcattgaattacctacactttcaacaatcaaattgcaattcaaagctctaacttcttttcaaaa 31456820  T
Q  206 ctctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattccc 305  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  31456821 ctctaacttcttttcacaaccctaacttcattaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaatttcc 31456920  T
Q  306 aaattttcagaactacaacctaccacctgttaaatcca 343  Q
    |||||| || ||||||||||||||   |||||||||||    
T  31456921 aaatttccaaaactacaacctaccttgtgttaaatcca 31456958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 76 - 355
Target Start/End: Complemental strand, 36508955 - 36508676
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||  ||  |||||||||  |||||||||| |||||||||||||||||    
T  36508955 cccaaatttgataggaaacttaacctatgattattctacaacctaaacaccaattattaccttaattcatcagattacctactctttcaacaatcaaatt 36508856  T
Q  176 gtaattcaaaa-ccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaa 274  Q
    | ||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  36508855 gcaattcaaaaaccctaacttctttttaaaactcttacttcttttcataaccctaacttcattaacatcttaatttcatcaatcaattctacaattaaaa 36508756  T
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||    
T  36508755 caaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccacctgttaaatcc-attttcagaatc 36508676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 185 - 355
Target Start/End: Original strand, 17876044 - 17876213
Alignment:
Q  185 aaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaatta 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17876044 aaccctaacttcttttcaaaactctaacttcttttcacaaccctaact-cattaacatcttaattccaacaatcaattctacaattaagacaaccaatta 17876142  T
Q  285 caacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17876143 caacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 17876213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 27868843 - 27868730
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27868843 aactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 27868744  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||||||||    
T  27868743 ctgaacatcaattc 27868730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 33472832 - 33472719
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33472832 aactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaatcccaaatttgataggaaacttaacctatgattattctacaac 33472733  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||||||||    
T  33472732 ctgaacatcaattc 33472719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 17875897 - 17876018
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||| ||||| | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17875897 cccaaatttgataagaaacatcacctattgttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 17875996  T
Q  176 gtaattcaaaaccctaacttct 197  Q
    | ||||||||||||||||||||    
T  17875997 gcaattcaaaaccctaacttct 17876018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 9776893 - 9777002
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  9776893 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgtttattctacaatctga 9776992  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  9776993 acatcgattc 9777002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 41875859 - 41875748
Alignment:
Q  20 ctctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 119  Q
    |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  41875859 ctctacgggaacatgccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacagtct 41875760  T
Q  120 gaacatcaattc 131  Q
    ||||||| ||||    
T  41875759 gaacatcgattc 41875748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 37804337 - 37804228
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||    
T  37804337 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctga 37804238  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  37804237 acatcgattc 37804228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 21503950 - 21504072
Alignment:
Q  46 ccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcat 145  Q
    ||||||| |||||||| || ||||||||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  21503950 ccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaacctatgattattctacaacctgaacatcagttcttatgttaattcat 21504048  T
Q  146 tggattacctacactttcaacaat 169  Q
    ||||| |||||| |||||||||||    
T  21504049 tggatcacctactctttcaacaat 21504072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 17011552 - 17011663
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||| |    
T  17011552 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactc 17011651  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  17011652 ttt-aacaatcaa 17011663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 265823 - 265973
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| | ||||| |||||||||||||||||||| |||||||| |||||||||| ||||    
T  265823 tctacgggaacagaccagttttcactcgaaaagccccaatttcatcaatccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctg 265922  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||||||| |||||||||||| |||||||||||| |||| |||||||||    
T  265923 aacttcaattcttatgttaattcactggattacctactcttt-aacaatcaa 265973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 24594290 - 24594219
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24594290 tttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattc 24594219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 29448625 - 29448775
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| || |||| | |||||||||||||||||| |||||||| |||||||||| ||||    
T  29448625 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaactcaaatctcaaatttgataggaaactcaacctatgtttattctacagcctg 29448724  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||||||| |||||||||||||||| |||||||| |||| |||||||||    
T  29448725 aacttcaattcttatgttaattcattggtttacctactcttt-aacaatcaa 29448775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 24668382 - 24668313
Alignment:
Q  62 tcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24668382 tcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattc 24668313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 24738151 - 24738082
Alignment:
Q  62 tcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24738151 tcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattc 24738082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 24750920 - 24750851
Alignment:
Q  62 tcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24750920 tcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattc 24750851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 18419277 - 18419348
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18419277 tttcatctacccaaatctcaaatttgataggaaacttaatctatgattattctacaacctgaacatcaattc 18419348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 355
Target Start/End: Complemental strand, 21405751 - 21405670
Alignment:
Q  275 caaccaattacaacttctaaacctaatt-cccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||||||||||||||||| ||||||| ||||||||  || |||||||||| || ||||||||||| ||||||||||||||    
T  21405751 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacctgttaaattcaattttcagaatc 21405670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 7484930 - 7484985
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||    
T  7484930 aacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctac 7484985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 20313059 - 20313169
Alignment:
Q  20 ctctacgggaacagaccagtttc-caaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacc 118  Q
    ||||||||||| | ||||||||  || ||||||| |||||||| || ||||||||| ||||||||  |||||||||| || ||||| |||||||| |||     
T  20313059 ctctacgggaagaaaccagtttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaatctatgtttattctataact 20313157  T
Q  119 tgaacatcaatt 130  Q
    ||||||||||||    
T  20313158 tgaacatcaatt 20313169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 31252011 - 31251941
Alignment:
Q  277 accaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattt 347  Q
    |||||||| |||||||||||||||||| ||||||   | ||||||||||||  ||||||||||||||||||    
T  31252011 accaattataacttctaaacctaattctcaaattcctaaaactacaacctataacctgttaaatccaattt 31251941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 21399024 - 21398911
Alignment:
Q  62 tcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactt 161  Q
    ||||| ||||||| ||||||||| |||| |||||   |||||| |||||||||||||||||||||||||  ||   ||||| ||| |||||||||| |||    
T  21399024 tcatctacccaaatcccaaattttatagaaaactcttcctatgtttattctacaacctgaacatcaatttgtacactaattaattagattacctactctt 21398925  T
Q  162 tcaacaatcaaatt 175  Q
    |  ||||| |||||    
T  21398924 ttgacaattaaatt 21398911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 22412930 - 22412983
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| ||| ||||||||||||||||||||||||||| | |||||||||||    
T  22412930 caaatttgttagaaaacttaacctatgattattctacaacataaacatcaattc 22412983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 19921566 - 19921632
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaa 339  Q
    |||||| ||||| |||||| ||||||||||||||||||| || || |||||||||| || |||||||    
T  19921566 aacaactaattataacttcaaaacctaattcccaaatttccataattacaacctacaacatgttaaa 19921632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 21618047 - 21617978
Alignment:
Q  279 caattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaatttt 348  Q
    ||||| |||||||||| |||||||| ||||||  || ||||||||||||| || |||||||| |||||||    
T  21618047 caatttcaacttctaaccctaattctcaaattcccaaaactacaacctacaacttgttaaattcaatttt 21617978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 39245982 - 39246042
Alignment:
Q  296 cctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  39245982 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 39246042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 21300168 - 21300113
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||| ||||||  || |||||| ||||||    
T  21300168 aacaaccaattacaacttcaaaacctaattctcaaattcccataactactacctac 21300113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 311
Target Start/End: Original strand, 31622053 - 31622091
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattt 311  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  31622053 aacaaccaattacgacttcaaaacctaattcccaaattt 31622091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 264093 - 264024
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| |||||||| |||||||||| || | | ||||||| || |||||||||||||||||||||||    
T  264093 acttttaaccctaattctcaaattttcaaaaacgaaaacctacaacatgttaaatccaattttcagaatc 264024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 20566482 - 20566515
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattccca 306  Q
    ||||||||||||||||||| ||||||||||||||    
T  20566482 aacaaccaattacaacttcaaaacctaattccca 20566515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 29346818 - 29346887
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || | | ||||||| || |||||||||||||||||||||||    
T  29346818 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatc 29346887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 29349291 - 29349360
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || | | ||||||| || |||||||||||||||||||||||    
T  29349291 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatc 29349360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 29351764 - 29351833
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || | | ||||||| || |||||||||||||||||||||||    
T  29351764 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatc 29351833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 38620273 - 38620342
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| |||||||| |||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  38620273 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 38620342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 39364221 - 39364290
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||| ||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  39364221 acttttaaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 39364290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 16063527 - 16063575
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaa 128  Q
    ||||||||||||||| | ||||| | |||||||||||||| ||||||||    
T  16063527 aatttgataggaaacattacctaggtttattctacaacctaaacatcaa 16063575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 352
Target Start/End: Complemental strand, 20469258 - 20469222
Alignment:
Q  316 aactacaacctaccacctgttaaatccaattttcaga 352  Q
    ||||||||||||| || ||||||||||||||||||||    
T  20469258 aactacaacctacaacttgttaaatccaattttcaga 20469222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 204; Significance: 1e-111; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 76 - 343
Target Start/End: Complemental strand, 7006 - 6739
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||| ||||| | || |||  |||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||    
T  7006 cccaaatttgataagaaacatcacatattgttattctacaacctgaacatcaattcttatgttaattcattgaattacatacactttcaacaatcaaatt 6907  T
Q  176 gtaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaac 275  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  6906 gcaattcaaaatcctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaatttcaaaaatcaattctacaattaaaac 6807  T
Q  276 aaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||    
T  6806 aaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctaccacctgttaaatcca 6739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 14798 - 14856
Alignment:
Q  298 taattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  14798 taattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 14856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 60 - 343
Target Start/End: Original strand, 14549474 - 14549758
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||  |||||||||  |||||| ||| |    
T  14549474 tttcatctacccaaatcccaaatttgataggaaacttaacatatgattattctacaacctgaacaccaattattaccttaattcatcagattacatactc 14549573  T
Q  160 tttcaacaatcaaattgtaattcaaaa-ccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatc 258  Q
    ||||||||||||||||| ||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| |||||  |||||||    
T  14549574 tttcaacaatcaaattgcaattcaaaaaccctaacttgtttttaaaaatctaacttcttttcacaaccctaacttcattaacatcctaattttaacaatc 14549673  T
Q  259 aattctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  14549674 aattctacaattaaaacacctaattacaacttctaaacctaattcccaaatttccaaaactacaacctaccacctgttaaatcca 14549758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 60 - 343
Target Start/End: Complemental strand, 19434887 - 19434613
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |   |||||||||  |||||||||| |    
T  19434887 tttcatctaccaaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattatttctttaattcatcagattacctactc 19434788  T
Q  160 tttcaacaatcaaattgtaattcaaaa-ccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatc 258  Q
    ||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  19434787 tttcaacaatcaaattgcaattcaaaaaccctaacttctttttaaaactctaacttcttttcacagccctaacttcattaacatcttaatttcaacaatc 19434688  T
Q  259 aattctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    ||||||||| |||||          ||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||    
T  19434687 aattctacatttaaa----------acaacttctaaacttaattcccaaatttcaaaaactacaacctaccacctgttaaatcca 19434613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 28386027 - 28386140
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||| || ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28386027 aactctacggaaatagaccagtttccagccaaaaacccaaattttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 28386126  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||||||||    
T  28386127 ctgaacatcaattc 28386140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 49547212 - 49547099
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||     
T  49547212 aactctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaat 49547113  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||| ||||    
T  49547112 ctgaacatcgattc 49547099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 33849528 - 33849639
Alignment:
Q  20 ctctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 119  Q
    |||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |    
T  33849528 ctctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacat 33849627  T
Q  120 gaacatcaattc 131  Q
    ||||||| ||||    
T  33849628 gaacatcgattc 33849639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 36038598 - 36038707
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  36038598 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 36038697  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  36038698 acatcgattc 36038707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 15534909 - 15535018
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||    
T  15534909 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctga 15535008  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  15535009 acatcgattc 15535018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 10694473 - 10694362
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |    
T  10694473 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattggattacctactc 10694374  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  10694373 ttt-aacaatcaa 10694362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 18462855 - 18462975
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    ||||||| ||||||||||| ||||||| | ||||||  || |||||||| |||||||||||||   ||||||||||||||||||||||||||||||||||    
T  18462855 acccaaatcccaaatttgacaggaaacattacctattgttgttctacaatctgaacatcaattttcatgttaattcattggattacctacactttcaaca 18462954  T
Q  168 atcaaattgtaattcaaaacc 188  Q
    |||||||||||||| ||||||    
T  18462955 atcaaattgtaatttaaaacc 18462975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 197
Target Start/End: Original strand, 16296681 - 16296831
Alignment:
Q  46 ccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcat 145  Q
    ||||||| ||||  ||| ||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||  ||  |||||||||    
T  16296681 ccaaaaaaccaaaatttaatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaacctgaacaccaattattaccttaattcat 16296780  T
Q  146 tggattacctacactttcaacaatcaaattgtaattcaaaaccctaacttct 197  Q
     ||||||||||| |||||||||||| |||| |||||  ||||||||| ||||    
T  16296781 cggattacctactctttcaacaatc-aattttaatttcaaaccctaatttct 16296831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 35660712 - 35660837
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||  ||| ||||| ||||||||||| |    
T  35660712 tttcatctacccaaatcccaaatttgataggaaacttaacatatgattattctacaacctgaacaccaattattaccttacttcatcggattacctactc 35660811  T
Q  160 tttcaacaatcaaattgtaattcaaa 185  Q
    | ||||||||||| ||  ||||||||    
T  35660812 tctcaacaatcaattttaaattcaaa 35660837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 9638795 - 9638903
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||| ||| ||  ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||     
T  9638795 ctacgggaacagaccaattttcagtcaaaaactcaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattaatctgcaacttgg 9638894  T
Q  122 acatcaatt 130  Q
    ||| |||||    
T  9638895 acaccaatt 9638903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 16277515 - 16277443
Alignment:
Q  59 ttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16277515 ttttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattc 16277443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 53387125 - 53387053
Alignment:
Q  59 ttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53387125 ttttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattc 53387053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 14477464 - 14477571
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    |||||||  |||||||||| ||||||| | || |||  ||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  14477464 acccaaattccaaatttgacaggaaacattacttattgttattctacaatctgaacatcaatttctatgttaattcattggattacctacactttcaaca 14477563  T
Q  168 atcaaatt 175  Q
    ||||||||    
T  14477564 atcaaatt 14477571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 15008753 - 15008903
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| ||||||| ||||||||| |||||||||| |||||||| |||||||||| ||||    
T  15008753 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaacccaaatcccaaattttataggaaactcaacctatgtttattctacagcctg 15008852  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| | ||||| ||||||||||||||| |||||| || |||| |||||||||    
T  15008853 aactttaattcttatgttaattcattgaattaccaactcttt-aacaatcaa 15008903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 40620317 - 40620467
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| ||||||| ||||||||||| |||||||| |||||||| |||| ||||  ||||    
T  40620317 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaacccaaatcccaaatttgagaggaaactcaacctatgtttatcctacggcctg 40620416  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  40620417 aacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 40620467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 10908239 - 10908128
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| |||||||   |||||||||||||||||| |||||||| |||||||||| ||||||| ||||||| |||||||||| |||| ||||||||| |    
T  10908239 tttcatcaacccaaataacaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattaattgaattacctactc 10908140  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  10908139 ttt-aacaatcaa 10908128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 224
Target Start/End: Complemental strand, 45314345 - 45314202
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaa 179  Q
    ||||||||||||||| | ||||| |  || |||||||||| |||||||| |   |  ||||||||| | ||||| ||||||||||| |||||||||| ||    
T  45314345 aatttgataggaaacattacctagggctactctacaacctaaacatcaactttcacattaattcatcgaattacttacactttcaagaatcaaattgcaa 45314246  T
Q  180 ttcaaaaccctaacttcttttcaaaactctaacttcttttcacaa 224  Q
    ||| |||||| |||||||||||||||| |||||||||||||||||    
T  45314245 ttc-aaacccaaacttcttttcaaaaccctaacttcttttcacaa 45314202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 14354007 - 14353888
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaa 179  Q
    ||||||||||||||| | ||||| ||||  |||||||||| |||||||| |   |  ||||||||| ||||||| ||||||||||| |||||||||| ||    
T  14354007 aatttgataggaaacattacctaggattgctctacaacctaaacatcaactttcacattaattcatcggattacttacactttcaagaatcaaattgcaa 14353908  T
Q  180 ttcaaaaccctaacttcttt 199  Q
    ||||||||||||||||||||    
T  14353907 ttcaaaaccctaacttcttt 14353888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 18230555 - 18230637
Alignment:
Q  49 aaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| | |||||||| || |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  18230555 aaaatcccaattttcatcaacacaaatcccaaatttgataggaaacttatcctatgattatcctacaacctgaacatcaattc 18230637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 13164963 - 13165072
Alignment:
Q  66 ccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaa 165  Q
    ||||||||| ||||||||||  ||  ||| | ||||||  ||||||||||||||| |||||||||   |||||||||||||||||| |||||||||||||    
T  13164963 ccacccaaatcccaaatttggcagagaacattacctattgttattctacaacctggacatcaattttcatgttaattcattggatttcctacactttcaa 13165062  T
Q  166 caatcaaatt 175  Q
    ||||||||||    
T  13165063 caatcaaatt 13165072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 15344776 - 15344831
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15344776 cccaaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattc 15344831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 23802613 - 23802560
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23802613 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattc 23802560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 12611752 - 12611807
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  12611752 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatcaattc 12611807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 172
Target Start/End: Original strand, 9622330 - 9622423
Alignment:
Q  79 aaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||||| | |||||||| |||||||| ||||||||||| |||||| ||| | | || ||||||||| |||||||||||| ||||||||||||||    
T  9622330 aaatttaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaatggattacctactctttcaacaatcaa 9622423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 9924085 - 9924162
Alignment:
Q  277 accaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||||||||||||||||||| |||||||  || |||| |||||||| || |||||||| |||||||||||||    
T  9924085 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaat 9924162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 15447586 - 15447533
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  15447586 caaatttgttagcaaacttaacctatgattattctacaacctgaacatcaattc 15447533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 51463239 - 51463184
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||    
T  51463239 cccaaatttgttagaaaactttacctatgattattctacaacctgaacatcaattc 51463184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 354
Target Start/End: Complemental strand, 9870568 - 9870488
Alignment:
Q  275 caaccaattacaacttctaaacctaatt-cccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||||||||||||| ||||||| ||||||||  || |||||||||||||  | ||| ||||||||||||||||||    
T  9870568 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacatcatgtcaaatccaattttcagaat 9870488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 6633661 - 6633606
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||    
T  6633661 aacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctac 6633606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 16998453 - 16998508
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  16998453 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 16998508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 25091581 - 25091636
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  25091581 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 25091636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 46001655 - 46001600
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||    
T  46001655 aacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctac 46001600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 53630598 - 53630543
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  53630598 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 53630543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 37019598 - 37019664
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaa 339  Q
    ||||||||||||||||||| ||||||||||| ||||||  || ||||||||||||| || |||||||    
T  37019598 aacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatgttaaa 37019664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 9638933 - 9638972
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaa 308  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  9638933 ttaaatcaaccaattacaacttctaaacctaattcccaaa 9638972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 10356556 - 10356505
Alignment:
Q  277 accaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  10356556 accaattacaacttcaaaacctaattcccaaattcccataactacaacctac 10356505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 11425871 - 11425926
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||| ||| ||||||||||||||||||  || |||||||||||||    
T  11425871 aacaaccaattacaatttcaaaacctaattcccaaattcccataactacaacctac 11425926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 11478772 - 11478697
Alignment:
Q  279 caattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||||| |||||||||||||| |||||||  || |||| ||| |||| || |||||||| |||||||||||||    
T  11478772 caattacaagttctaaacctaatttccaaattcccaaaacttcaatctacaacttgttaaattcaattttcagaat 11478697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 15117677 - 15117608
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  15117677 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 15117608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 21062593 - 21062645
Alignment:
Q  298 taattcccaaattttcagaactacaacctaccacctgttaaatccaattttca 350  Q
    |||||| |||||  ||| |||||||||||||||| ||||||||||||||||||    
T  21062593 taattctcaaatcctcaaaactacaacctaccacttgttaaatccaattttca 21062645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 13043980 - 13043925
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||||||||| | ||| | ||||||  ||||||||||||||||||||||||||    
T  13043980 cccaaatttgataaggaacatcacctattgttattctacaacctgaacatcaattc 13043925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 15115150 - 15115205
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||  |||||||||||||  || |||||||||||||    
T  15115150 aacaaccaattacaacttcaaaaaataattcccaaattcccataactacaacctac 15115205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 312
Target Start/End: Complemental strand, 26921745 - 26921706
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaatttt 312  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  26921745 aacaaccaattacgacttcaaaacctaattcccaaatttt 26921706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 42875725 - 42875780
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||| ||||||||||||| ||||||| ||||||||||  || |||||||||||||    
T  42875725 aacaatcaattacaacttcaaaacctatttcccaaattcccataactacaacctac 42875780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 12033085 - 12033027
Alignment:
Q  298 taattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  12033085 taattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 12033027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 3485806 - 3485875
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| |||||||| |||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  3485806 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 3485875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 14873410 - 14873341
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaact-acaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || | | ||||||| || |||||||||||||||||||||||    
T  14873410 acttttaaccctaattcccaaattctcaaaaattaaaacctacaacatgttaaatccaattttcagaatc 14873341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 18238937 - 18238868
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || ||||||||||||||| |||||||    
T  18238937 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaatc 18238868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 19243540 - 19243609
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| |||||||| |||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  19243540 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 19243609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 44616128 - 44616197
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  44616128 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 44616197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 50221663 - 50221594
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| |||||||| |||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  50221663 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 50221594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 21144 - 21204
Alignment:
Q  294 aacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||| |||||  ||| ||||||||||||| || |||||||| ||||| |||||||    
T  21144 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaattcaattctcagaat 21204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 173; Significance: 6e-93; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 76 - 343
Target Start/End: Complemental strand, 106373 - 106105
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||  ||||  ||  |||||||||   ||||||| | |||||||||||||||||    
T  106373 cccaaatttgataggaaacttaacctacgattattttacaacctgaacaataattattaccttaattcatcaaattaccttctctttcaacaatcaaatt 106274  T
Q  176 gtaattcaaaa-ccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaa 274  Q
    | ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  106273 gcaattcaaaaaccctaacttctttttaaaactctaacttcttttcacaaccctaacttcgttaacatcttaatttcaacaatcaattctacaattaaaa 106174  T
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    |||||||||||||| |||||||||||||||||||||| || |||||||  |||||||||||||||||||    
T  106173 caaccaattacaacgtctaaacctaattcccaaatttccaaaactacagtctaccacctgttaaatcca 106105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 13144 - 13075
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||| ||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  13144 acttttaatcctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 13075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 3e-88; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 76 - 343
Target Start/End: Original strand, 18585519 - 18585803
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||| ||||| | || |||  |||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||    
T  18585519 cccaaatttgataagaaacatcacatattgttattctacaacctgaacatcaattcttatgttaattcattgaattacatacactttcaacaatcaaatt 18585618  T
Q  176 gtaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaa-----------------caatc 258  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||                  ||||    
T  18585619 gcaattcaaaatcctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaatttcaaaaatcaattctacaattaaatc 18585718  T
Q  259 aattctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||    
T  18585719 aattctacaattaaaacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctaccacctgttaaatcca 18585803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 23956646 - 23956759
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23956646 aactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 23956745  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||||||||    
T  23956746 ctgaacatcaattc 23956759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 13765129 - 13765243
Alignment:
Q  17 aaactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaa 116  Q
    |||||||| ||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13765129 aaactctatgggaacagaccagtttccagccaaaaacctaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaa 13765228  T
Q  117 cctgaacatcaattc 131  Q
    |||||||||||||||    
T  13765229 cctgaacatcaattc 13765243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 28288771 - 28288662
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  28288771 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 28288672  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  28288671 acatcgattc 28288662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 31021987 - 31021877
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||||||||||||   ||| |||||||  ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31021987 aactctacgggaacagaccag---ccagccaaaaactcaaattttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 31021891  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||||||||    
T  31021890 ctgaacatcaattc 31021877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 12942917 - 12943026
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||| ||||    
T  12942917 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatatttattctacaatctga 12943016  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  12943017 acatcgattc 12943026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 46 - 188
Target Start/End: Original strand, 35057355 - 35057496
Alignment:
Q  46 ccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcat 145  Q
    |||||||||||| ||| |||| ||||||| |||||||||||||| ||||||||| || ||||||||||||||||||| | |||||   |   | ||||||    
T  35057355 ccaaaaatccaaattt-catctacccaaatcccaaatttgatagaaaacttaacttaagattattctacaacctgaataacaattttcaccatgattcat 35057453  T
Q  146 tggattacctacactttcaacaatcaaattgtaattcaaaacc 188  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  35057454 tggattacctacactttcaacaatcaaattgaaattcaaaacc 35057496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 19825757 - 19825645
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||| ||||||||||||||||||| || ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||    
T  19825757 aactatacgggaacagaccagttttcagccaaaaacccaatttttcatccacctaaactccaaatttgataggaaacttaacctatgattaatctgcaac 19825658  T
Q  118 ctgaacatcaatt 130  Q
     || ||| |||||    
T  19825657 ttggacaccaatt 19825645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 15891836 - 15891686
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| ||||||| |||||||||||||||||||| |||||||| ||||| |||| ||||    
T  15891836 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattttacagcctg 15891737  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  15891736 aacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 15891686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 15900921 - 15900771
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| ||||||| |||||||||||||||||||| |||||||| ||||| |||| ||||    
T  15900921 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattttacagcctg 15900822  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  15900821 aacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 15900771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 29045088 - 29045200
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| || |||| |||||||||||||| |||||  |||||||||||||||||||||||||||||||||  ||  ||| ||||| ||||||||||| |    
T  29045088 tttcatcaactcaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaacatcaattattaccttagttcatcggattacctactc 29045187  T
Q  160 tttcaacaatcaa 172  Q
    |||||||||||||    
T  29045188 tttcaacaatcaa 29045200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 18982255 - 18982374
Alignment:
Q  79 aaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgta 178  Q
    |||||||||||||||| | ||| ||  ||||||||||||||||||||| |||  ||| ||| ||||||||||||||||| |||||||||||||||||| |    
T  18982255 aaatttgataggaaacatcaccgattgttattctacaacctgaacatcgatttttatattagttcattggattacctacgctttcaacaatcaaattgca 18982354  T
Q  179 a-ttcaaaaccctaacttct 197  Q
    | || |||||||||||||||    
T  18982355 atttaaaaaccctaacttct 18982374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 187
Target Start/End: Original strand, 13285582 - 13285699
Alignment:
Q  70 ccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 169  Q
    ||||| ||| |||||||||||||||||||| || ||||||||||||||||||| | |||||   |   | ||| ||||||||||||||||||||||||||    
T  13285582 ccaaatccctaatttgataggaaacttaacttaagattattctacaacctgaataacaattttcaccatgattaattggattacctacactttcaacaat 13285681  T
Q  170 caaattgtaattcaaaac 187  Q
    ||||||| ||||||||||    
T  13285682 caaattgaaattcaaaac 13285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 3007082 - 3006963
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaa 179  Q
    ||||||||||||||| | ||||| | ||| |||||||||| |||||||| |   |  ||||||||||||||||| ||||||||||| |||||||||| ||    
T  3007082 aatttgataggaaacattacctagggttactctacaacctaaacatcaactttcacattaattcattggattacttacactttcaagaatcaaattgcaa 3006983  T
Q  180 ttcaaaaccctaacttcttt 199  Q
    ||||||||| ||||||||||    
T  3006982 ttcaaaaccataacttcttt 3006963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 23226066 - 23226013
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23226066 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 23226013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 15173681 - 15173585
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattaccta 156  Q
    ||||||| | ||||| |||||||||||||||||||| |||||||| |||| |||||  |||||| ||||||| ||||||||||||||| ||||||||    
T  15173681 tttcatcaatccaaatcccaaatttgataggaaactcaacctatgtttatcctacaggctgaacttcaattcttatgttaattcattgaattaccta 15173585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 263 - 355
Target Start/End: Original strand, 19401012 - 19401104
Alignment:
Q  263 ctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| |||||| ||| |||||||||||| |||||||||||| ||||||  || ||||||||||||| ||||||||||| ||||||||||||||    
T  19401012 ctactattaaatcaaacaattacaacttataaacctaattctcaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatc 19401104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 25807916 - 25807979
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaa 81  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  25807916 aactctacgggaacagaccagtttccagctaaaaacccaatttttcatccacccaaaccccaaa 25807979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 28948490 - 28948573
Alignment:
Q  261 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaattt-tcagaactacaacctaccacctgttaaatcca 343  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| | | | ||||||| |||||| |||||||||||    
T  28948490 ttctactattaaaacaaccaattacaacttctaaacctaattcccaaatttctaaaacctacaacttaccacttgttaaatcca 28948573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 18459176 - 18459245
Alignment:
Q  106 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||||||||| || ||  ||||||||||||||||||| |||||||||||||||||||||||    
T  18459176 ttattctacaacctgaacaacagtttttatgttaattcattggatttcctacactttcaacaatcaaatt 18459245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 25619106 - 25619053
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25619106 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattc 25619053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 20556243 - 20556188
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  20556243 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatcaattc 20556188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 23415730 - 23415801
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||| |||||||    
T  23415730 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattc 23415801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 175
Target Start/End: Complemental strand, 24506327 - 24506228
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||| ||||| |  ||||| ||||||||| |||  |||||||||||  |||  |||||||||||||||||||||||||||||||| |||||    
T  24506327 cccaaatttgataagaaacattgcctattattattctaaaacaagaacatcaatttttatactaattcattggattacctacactttcaacaattaaatt 24506228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 1818763 - 1818888
Alignment:
Q  46 ccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcat 145  Q
    ||||||| |||||||| || |||||||||  |||||||  | |||||||| |||||||| ||||||||||| |||||| ||| | | || |||||||||     
T  1818763 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaacctcattccttacgttaattcaa 1818861  T
Q  146 tggattacctacactttcaacaatcaa 172  Q
    || ||||||||| ||||||||||||||    
T  1818862 tgaattacctactctttcaacaatcaa 1818888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 23501595 - 23501681
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaattttc-agaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||| |||| |||||||||||||||||||||||||||||||| | | ||||||||||||| || |||||||| || ||||||||||    
T  23501595 ttaaatcaacaaattacaacttctaaacctaattcccaaatttccaaaaactacaacctacaacttgttaaattcagttttcagaat 23501681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 611641 - 611696
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||| |||||    
T  611641 cccaaatttgttaggaaacttaacctatgattattctaccacctgaacattaattc 611696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 18928614 - 18928689
Alignment:
Q  279 caattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||||||||||||||||| |||||||  || |||| |||||||| || |||||||| |||||||||||||    
T  18928614 caattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaat 18928689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 14978739 - 14978697
Alignment:
Q  89 ggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14978739 ggaaacttaacctatgattattctacaacctgaacatcaattc 14978697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 15890836 - 15890770
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaa 339  Q
    ||||||||||||||||||| ||||||||||||||||||  || ||||||||||||| || |||||||    
T  15890836 aacaaccaattacaacttcaaaacctaattcccaaattaacaaaactacaacctacaacatgttaaa 15890770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 27330105 - 27330039
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaa 339  Q
    ||||||||||||||||||| ||||||||||||||||||  || ||||||||||||| || |||||||    
T  27330105 aacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaa 27330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 27390845 - 27390779
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaa 339  Q
    ||||||||||||||||||| ||||||||||||||||||  || ||||||||||||| || |||||||    
T  27390845 aacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaa 27390779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 27557488 - 27557558
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 130  Q
    ||||||| || |||| |||||||||||||| ||||| |||||||| |||||||||||||||||| ||||||    
T  27557488 tttcatcgactcaaatcccaaatttgatagaaaactcaacctatgtttattctacaacctgaacttcaatt 27557558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 7827900 - 7827955
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  7827900 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 7827955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 23150411 - 23150356
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  23150411 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 23150356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 5833863 - 5833817
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaaca 124  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  5833863 caaatttgataggacacttaacatatgattattctacaacctgaaca 5833817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 19655355 - 19655289
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaa 339  Q
    |||||| |||||||||||| ||||||||||||||||||  || ||||||||||||| || |||||||    
T  19655355 aacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgttaaa 19655289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 200
Target Start/End: Original strand, 31166063 - 31166184
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattg-ta 178  Q
    |||||||||| |||| | ||||| | ||| |||||||||| |||||||| |   |  ||||||||||||||||  |||||||| || ||||||||||  |    
T  31166063 aatttgatagaaaacattacctagggttactctacaacctaaacatcaactttcacattaattcattggattagttacactttaaagaatcaaattgcaa 31166162  T
Q  179 attcaaaaccctaacttctttt 200  Q
    ||| ||||||||||||||||||    
T  31166163 attgaaaaccctaacttctttt 31166184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 25601515 - 25601439
Alignment:
Q  99 cctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    |||||||||||| |||||| ||||||||||||  ||  ||||||| ||||||||||||| |||| |||||| |||||    
T  25601515 cctatgattattatacaacatgaacatcaattattaccttaattctttggattacctactcttttaacaattaaatt 25601439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 18333917 - 18333848
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  18333917 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 18333848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 24423384 - 24423453
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  24423384 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 24423453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 31732017 - 31731948
Alignment:
Q  285 caacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||| |||||||||||| |||||   || ||||||||||||| || ||| ||||||||||||||||||    
T  31732017 caacttttaaacctaattctcaaatccccaaaactacaacctacaacttgtcaaatccaattttcagaat 31731948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 33865115 - 33865184
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  33865115 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 33865184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 18343037 - 18343097
Alignment:
Q  296 cctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  18343037 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 18343097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 25921828 - 25921894
Alignment:
Q  62 tcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaat 129  Q
    ||||| |||| ||||| |||||| |||| ||||||  |||||||||||||||||||||||||| ||||    
T  25921828 tcatcaaccctaacccaaaattt-atagaaaacttttcctatgattattctacaacctgaacaccaat 25921894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 27125601 - 27125546
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||| |||||||||||| |||||||| |||||||||  || |||||||||||||    
T  27125601 aacaactaattacaacttcaaaacctaagtcccaaattcccataactacaacctac 27125546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 12743168 - 12743226
Alignment:
Q  298 taattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  12743168 taattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 12743226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 1540236 - 1540167
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||| ||||||    
T  1540236 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatc 1540167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 22783065 - 22783134
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  22783065 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 22783134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 25753372 - 25753448
Alignment:
Q  279 caattacaacttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||||||||||| |||||||| |||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  25753372 caatcacaacttctaaccctaattctcaaattctcaaaaacta-aacctacaacatgttaaatacaattttcagaatc 25753448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 25755542 - 25755618
Alignment:
Q  279 caattacaacttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||||||||||| |||||||| |||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  25755542 caatcacaacttctaaccctaattctcaaattctcaaaaacta-aacctacaacatgttaaatacaattttcagaatc 25755618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 26923770 - 26923701
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  26923770 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaattttcagaatc 26923701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 18703503 - 18703551
Alignment:
Q  280 aattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||||||||| ||| ||||||||||||||  || |||||||||||||    
T  18703503 aattacaacttcaaaatctaattcccaaattcccataactacaacctac 18703551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 18709438 - 18709486
Alignment:
Q  280 aattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||||||||| ||| ||||||||||||||  || |||||||||||||    
T  18709438 aattacaacttcaaaatctaattcccaaattcccataactacaacctac 18709486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 138; Significance: 4e-72; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 60 - 249
Target Start/End: Original strand, 21946 - 22135
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||  |||||||||  |||||||||| |    
T  21946 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacaccaattcttaccttaattcatcagattacctactc 22045  T
Q  160 tttcaacaatcaaattgtaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaatt 249  Q
    ||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  22046 tttcaacaatcaaattgcaattcaaaaccctaacttcattttaaaactctaacttcttttcacaaccctaacttcatttacatcttaatt 22135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 137 - 249
Target Start/End: Original strand, 9926 - 10038
Alignment:
Q  137 ttaattcattggattacctacactttcaacaatcaaattgtaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcat 236  Q
    |||||||||  |||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  9926 ttaattcatcagattacctactctttcaacaatcaaattgcaattcaaaaccctaacttctttttaaaactctaacttcttttcacaagcctaacttcat 10025  T
Q  237 taacatcttaatt 249  Q
    |||||| ||||||    
T  10026 taacatgttaatt 10038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 146651 - 146706
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||||||||| |||||| ||||||||||||||||||  || |||||||||||||    
T  146651 aacaaccaattataacttcaaaacctaattcccaaattcccataactacaacctac 146706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 188 - 307
Target Start/End: Original strand, 80 - 199
Alignment:
Q  188 cctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  80 cctaacttcttttcaaaactctaacttcttttcacaaccttaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaa 179  T
Q  288 cttctaaacctaattcccaa 307  Q
    ||||||||||||||| ||||    
T  180 cttctaaacctaatttccaa 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 5e-53; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 8414017 - 8413904
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8414017 aactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 8413918  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||||||||    
T  8413917 ctgaacatcaattc 8413904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 79 - 234
Target Start/End: Original strand, 22344966 - 22345121
Alignment:
Q  79 aaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgta 178  Q
    |||||||||||||||| | ||||||  ||||||||||||||||||||| |||  ||| |||||||||||||||||||||||||||||||||||||||| |    
T  22344966 aaatttgataggaaacatcacctattgttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaatcaaattgca 22345065  T
Q  179 attcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttc 234  Q
    |||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||    
T  22345066 attcaaaaccataacttcttttcacaaccctaacttcttttcaaaaccctaacttc 22345121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 79 - 234
Target Start/End: Original strand, 22356626 - 22356781
Alignment:
Q  79 aaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgta 178  Q
    |||||||||||||||| | ||||||  ||||||||||||||||||||| |||  ||| |||||||||||||||||||||||||||||||||||||||| |    
T  22356626 aaatttgataggaaacatcacctattgttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaatcaaattgca 22356725  T
Q  179 attcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttc 234  Q
    |||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||    
T  22356726 attcaaaaccataacttcttttcacaaccctaacttcttttcaaaaccctaacttc 22356781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 19882731 - 19882843
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19882731 aactctacgggaacggaccagtttccagccaaaaagccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 19882830  T
Q  118 ctgaacatcaatt 130  Q
    |||||||||||||    
T  19882831 ctgaacatcaatt 19882843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 20517268 - 20517126
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||||||||| | ||||||  ||||||||||||||||||||| |||  ||| |||||||||||||||||||||||||||||||||||||||    
T  20517268 cccaaatttgataggaaacatcacctattgttattctacaacctgaacatcgatttttatattaattcattggattacctacactttcaacaatcaaatt 20517169  T
Q  176 gtaattcaaaaccctaacttcttttcaaaactctaacttcttt 218  Q
    | |||||||||||| |||||||||||| ||| |||||||||||    
T  20517168 gcaattcaaaaccccaacttcttttcacaaccctaacttcttt 20517126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 11775506 - 11775598
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattatt 110  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11775506 aactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattatt 11775598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 25657742 - 25657631
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||| |    
T  25657742 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacatcaattcttatgttaattcattgaattacctactc 25657643  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  25657642 ttt-aacaatcaa 25657631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 42265761 - 42265647
Alignment:
Q  83 ttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaattc 182  Q
    |||||||||||| | || ||| |||| |||||||||||||||||||||  ||| ||||||||||||||||| ||||| |||||||||||||||| |||||    
T  42265761 ttgataggaaacctcacttattattactctacaacctgaacatcaatttttatattaattcattggattacatacaccttcaacaatcaaattgcaattc 42265662  T
Q  183 aaaaccctaacttct 197  Q
    |||||||||||||||    
T  42265661 aaaaccctaacttct 42265647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 20879313 - 20879418
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||| ||||||| | ||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||    
T  20879313 cccaaatttgacaggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattggattacctacacttttaacaatcaattt 20879412  T
Q  176 gtaatt 181  Q
    | ||||    
T  20879413 gcaatt 20879418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 16198660 - 16198771
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||| |    
T  16198660 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactc 16198759  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  16198760 ttt-aacaatcaa 16198771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 23478906 - 23479016
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| || ||||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||| |    
T  23478906 tttcatcaacccaaatcctaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactc 23479005  T
Q  160 tttcaacaatca 171  Q
    ||| ||||||||    
T  23479006 ttt-aacaatca 23479016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 22483620 - 22483713
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaat 169  Q
    ||||||||  |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||    
T  22483620 cccaaattcaataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaattcatcagattacctactctttcaacaat 22483713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 22532268 - 22532186
Alignment:
Q  261 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  22532268 ttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctaccacctgttaaatcca 22532186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 22536953 - 22536871
Alignment:
Q  261 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  22536953 ttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctaccacctgttaaatcca 22536871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 205
Target Start/End: Original strand, 36305686 - 36305811
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaa 179  Q
    ||||||||||||||| | ||||| | ||| ||||||| || |||||||| |   |  ||||||||| ||||||| ||||||||||| |||||||||| ||    
T  36305686 aatttgataggaaacattacctagggttactctacaatctaaacatcaactttcacattaattcatcggattacttacactttcaagaatcaaattgcaa 36305785  T
Q  180 ttcaaaaccctaacttcttttcaaaa 205  Q
    ||||||||||||||||||||||||||    
T  36305786 ttcaaaaccctaacttcttttcaaaa 36305811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 19880663 - 19880758
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||||  ||||||||| |||| |||||||||    
T  19880663 cccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcatttaattacctactcttt-aacaatcaa 19880758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 355
Target Start/End: Complemental strand, 22318049 - 22317953
Alignment:
Q  259 aattctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||||| |||||| |||||||||||||||||||||||||| |||||||||  |  ||||||||||||  ||||||||||| ||||||||||||||    
T  22318049 aattctactattaaaccaaccaattacaacttctaaacctaaatcccaaattcccgaaactacaacctagaacctgttaaattcaattttcagaatc 22317953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 26454546 - 26454641
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||| | ||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  26454546 cccaaatttgataggaaactcaacctatgtttattctacagcctgaactttaattcttatgttaattcattgaattacctactcttt-aacaatcaa 26454641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 36732704 - 36732600
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||| ||  | | || ||||||||| ||| |||||||| |||||||||    
T  36732704 acccaaatcccaaatttgataggaaacttgacctatgattattctacaatctgaacctccttccttacgttaattcaatggtttacctactctttcaaca 36732605  T
Q  168 atcaa 172  Q
    |||||    
T  36732604 atcaa 36732600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 22610532 - 22610382
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    |||||||||| | ||| |||| || ||||||| |||||||| || ||||||||| || |||||  | |||||||| |||||||| ||||||||||| |||    
T  22610532 tctacgggaagaaacctgttttcagccaaaaacccaatttt-caaccacccaaatccaaaattcaaaaggaaactcaacctatgtttattctacaatctg 22610434  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||| | | || ||||||||| |||||||||||| ||||||||||||||    
T  22610433 aacctcattccttacgttaattcaatggattacctactctttcaacaatcaa 22610382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 17796016 - 17796079
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaa 81  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  17796016 aactctacggaaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaa 17796079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 25483652 - 25483597
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25483652 cccaaatttgataggaaacttaacctatgattattctacaacctaaacatcaattc 25483597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 23661140 - 23661193
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23661140 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattc 23661193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 45469348 - 45469263
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||| |||||||||||||||||||||| |||||||||||||| || ||||| ||||||| || |||||||| | |||||||||||    
T  45469348 ttaaatcaaccaattacaacttctaaacataattcccaaatttacaaaactataacctacaacttgttaaattcgattttcagaat 45469263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 20455831 - 20455883
Alignment:
Q  79 aaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20455831 aaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattc 20455883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 20460809 - 20460861
Alignment:
Q  79 aaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20460809 aaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattc 20460861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 22708533 - 22708414
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaa 179  Q
    ||||||||||||||| | ||||||| ||| |||| ||| | |||||||| |   |  ||||||||||| ||||| ||||||||||| |||||||||| ||    
T  22708533 aatttgataggaaacattacctatggttactctataacttaaacatcaactttcacattaattcattgtattacttacactttcaagaatcaaattgcaa 22708434  T
Q  180 ttcaaaaccctaacttcttt 199  Q
    || |||||||||||||||||    
T  22708433 tttaaaaccctaacttcttt 22708414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 17460416 - 17460363
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  17460416 caaatttgtttggaaacttaacctatgattattctacaacctgaacatcaattc 17460363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 20463042 - 20463091
Alignment:
Q  82 tttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20463042 tttgttaggaaacttaacctatgattattctacaacctgaacatcaattc 20463091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 20455095 - 20455147
Alignment:
Q  79 aaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  20455095 aaatttgttaggacacttaacctatgattattctacaacctgaacatcaattc 20455147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 21676773 - 21676713
Alignment:
Q  106 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaac 166  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||||||||    
T  21676773 ttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaac 21676713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 355
Target Start/End: Complemental strand, 42265631 - 42265551
Alignment:
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||| || |||||||||| |||||||||||||||  || ||||||||||||| || |||||||| ||||||||||||||    
T  42265631 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaatc 42265551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 20083762 - 20083707
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  20083762 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctac 20083707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 14397175 - 14397066
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| ||||||| || ||||||||||||||||| |||||||| |||||||||| ||||    
T  14397175 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaacccaaatcc-aaatttgataggaaactcaacctatgtttattctacagcctg 14397077  T
Q  121 aacatcaattc 131  Q
    ||| |||||||    
T  14397076 aacttcaattc 14397066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 355
Target Start/End: Original strand, 3273819 - 3273900
Alignment:
Q  275 caaccaattacaacttctaaacctaatt-cccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||||| ||||||||||| ||||||| ||||||||  || |||||||||| || ||||||||||| ||||||||||||||    
T  3273819 caaccaatcacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacctgttaaattcaattttcagaatc 3273900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 31722622 - 31722541
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttca 350  Q
    ||||| ||||||||||||||||||||||| |||| |||||||  || ||||||||||||| || |||||||| | |||||||    
T  31722622 ttaaatcaaccaattacaacttctaaaccaaatttccaaattcccaaaactacaacctacaacttgttaaattcgattttca 31722541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 12037384 - 12037280
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    ||||||| ||||||||||||||||  ||  |||||||||||||||||||||| |||| |||||  ||   |||||||| |||||| |||| ||||| |||    
T  12037384 acccaaatcccaaatttgataggagtctctacctatgattattctacaacctaaacaccaattattaacctaattcatcggattatctactctttctaca 12037285  T
Q  168 atcaa 172  Q
    |||||    
T  12037284 atcaa 12037280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 5082336 - 5082281
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  5082336 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 5082281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 6202704 - 6202759
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||    
T  6202704 aacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctac 6202759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 19140693 - 19140748
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  19140693 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 19140748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 37292633 - 37292688
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||    
T  37292633 aacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctac 37292688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 23883999 - 23884105
Alignment:
Q  66 ccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaa 165  Q
    ||||||||| | ||||||  | |||||||| |||||||| ||||||||||| |||||| ||| | | || ||||||||| ||  |||||||| |||||||    
T  23883999 ccacccaaatcgcaaattcaaaaggaaactcaacctatgtttattctacaatctgaacttcattccttacgttaattcaatgatttacctactctttcaa 23884098  T
Q  166 caatcaa 172  Q
    |||||||    
T  23884099 caatcaa 23884105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 20045520 - 20045451
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||||||| || ||| ||||||| || |||||||||||||||||||||||    
T  20045520 acttttaaccctaattcccaaattttcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 20045451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 36727151 - 36727082
Alignment:
Q  285 caacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||||||||||||||| |||||    | ||||||||||||| || ||||||||||||||||||||||    
T  36727151 caacttctaaacctaattctcaaatcccaaaaactacaacctacaacttgttaaatccaattttcagaat 36727082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 39694400 - 39694331
Alignment:
Q  274 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    ||||| ||||||||| ||||| |||||||||||||||  || ||||||||||||| || |||||||||||    
T  39694400 acaactaattacaacgtctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaatcca 39694331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 20022161 - 20022084
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||| |||||||||||||||||||||||||||||||||        ||||||||||||| || |||||||| | |||||||||||    
T  20022161 ttaaatcaaccaattacaacttctaaacctaattcccaa--------aactacaacctacaacttgttaaattcgattttcagaat 20022084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 20178654 - 20178598
Alignment:
Q  273 aacaaccaatt-acaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||    
T  20178654 aacaaccaatttacaacttcaaaacctaattcccaaattctcataactacaacctac 20178598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 5761462 - 5761517
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||| |||||||||||| ||||||||||||||||||  || |||||||||||||    
T  5761462 aacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctac 5761517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 6573180 - 6573125
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||||||||||||    
T  6573180 aacaaccaattacaacttcaaaacctcattcccaaattcccataactacaacctac 6573125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 1485239 - 1485308
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  1485239 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 1485308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 4484117 - 4484186
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  4484117 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 4484186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 14408769 - 14408700
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  14408769 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 14408700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 14824613 - 14824682
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  14824613 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 14824682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 6101877 - 6101822
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||||||||| |||||| |||||| |||||||||||  || |||||||||||||    
T  6101877 aacaaccaattataacttcaaaacctgattcccaaattcccataactacaacctac 6101822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 21679014 - 21678947
Alignment:
Q  118 ctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaattcaaa 185  Q
    ||||||||||||   ||| ||||||||||| ||||||||| |||||||| ||| ||||| ||||||||    
T  21679014 ctgaacatcaatatttatattaattcattgaattacctactctttcaaccatccaattgcaattcaaa 21678947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 25733921 - 25733862
Alignment:
Q  296 cctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||| ||| ||||| ||| ||| || | |||||||||||||||||||||    
T  25733921 cctaattcccaaattctcaaaactaaaacttacaacatattaaatccaattttcagaatc 25733862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 39936134 - 39936079
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||| |||||||||||| ||||||||||| ||||||  || |||||||||||||    
T  39936134 aacaactaattacaacttcaaaacctaattcgcaaattcccataactacaacctac 39936079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 42818031 - 42817976
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||| |||||| |||||||  || |||||||||||||    
T  42818031 aacaaccaattacaacttcaaaatctaatttccaaattcccataactacaacctac 42817976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 4541696 - 4541626
Alignment:
Q  286 aacttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||| ||| ||||| ||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  4541696 aacttttaaccctaaatcccaaattatcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 4541626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 18677387 - 18677318
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || | | ||||||| || |||||||||||||||||||||||    
T  18677387 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatc 18677318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 20517153 - 20517120
Alignment:
Q  210 aacttcttttcacaaccctaacttcattaacatc 243  Q
    ||||||||||||||||||||||||| ||||||||    
T  20517153 aacttcttttcacaaccctaacttctttaacatc 20517120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 23948211 - 23948272
Alignment:
Q  294 aacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||||||| |||||   || ||||||||||||| || ||||||||||| |||||||||||    
T  23948211 aacctaattctcaaatccccaaaactacaacctacaacttgttaaatccacttttcagaatc 23948272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 5e-53; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 42311 - 42424
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42311 aactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 42410  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||||||||    
T  42411 ctgaacatcaattc 42424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 16324809 - 16324696
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  16324809 aactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaagctataattattctacaac 16324710  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||||||||    
T  16324709 ctgaacatcaattc 16324696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 13522560 - 13522422
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||||||||| | ||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||| ||    
T  13522560 cccaaatttgataggaaacatcacctattgttattctacaacctgaacatcaattcttatgttaattcattggattacctactcttt-aacgatcaattt 13522462  T
Q  176 gtaattcaaaaccctaacttcttttcaaaactctaacttc 215  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  13522461 gaaattcaaaaccctaacttcttttcaaaactctaacttc 13522422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 3803597 - 3803710
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||     
T  3803597 aactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaat 3803696  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||| ||||    
T  3803697 ctgaacatcgattc 3803710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 6805139 - 6805000
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||| |||||  ||  |||||||||  |||||||||| |||||||||||||||||    
T  6805139 cccaaatttgatagaaaacttaacatatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaatcaaatt 6805040  T
Q  176 gtaattcaaaaccctaacttcttttcaaaactctaacttc 215  Q
    | ||||||||||||||||||||||||| ||| ||||||||    
T  6805039 gcaattcaaaaccctaacttcttttcacaaccctaacttc 6805000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 12305850 - 12305959
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  12305850 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 12305949  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  12305950 acatcgattc 12305959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 13437022 - 13437135
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||| |||||||||||||||| || ||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  13437022 aactctatgggaacagaccagttttcagccaaaaacccaatttttcattcacccaaaccccaaatttgataggaaactcaacctatgtttattctacaac 13437121  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||| ||||    
T  13437122 ctgaacatcgattc 13437135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 29544298 - 29544189
Alignment:
Q  22 ctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctga 121  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  29544298 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccactcaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 29544199  T
Q  122 acatcaattc 131  Q
    ||||| ||||    
T  29544198 acatcgattc 29544189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 54521546 - 54521659
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||| ||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||     
T  54521546 aactctacggaaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatatttattctacaat 54521645  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||| ||||    
T  54521646 ctgaacatcgattc 54521659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 45803603 - 45803453
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    |||||||||| | ||| |||| || ||||||| |||||||| || |||||| || ||||||||  |||||||||| |||||||| |||||||||||||||    
T  45803603 tctacgggaagaaacctgttttcagccaaaaacccaatttt-caaccaccctaatcccaaattcaataggaaactcaacctatgtttattctacaacctg 45803505  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
     |||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  45803504 gacatcaattcttatgttaattcatcggattacctactctttcaacaatcaa 45803453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 48631172 - 48631268
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||||||||||||||||||| | ||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  48631172 cccaaatttgataggaaacattacctattgttattctacaacctgaacatcaattcttatgttaattcattgaattacctacactttcaacaatcaa 48631268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 18890238 - 18890320
Alignment:
Q  49 aaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18890238 aaaacccaaattttcatccacccaaaccccaaatttgataggaaacttaacctatgattattccacaacctgaacatcaattc 18890320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 14641812 - 14641707
Alignment:
Q  25 cgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaaca 124  Q
    ||||||||||||||||| || ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||| || |||    
T  14641812 cgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaatcccaaatttgataggaaacttaacctatgattaatctgcaacttggaca 14641713  T
Q  125 tcaatt 130  Q
     |||||    
T  14641712 ccaatt 14641707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 16979697 - 16979847
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| |||||||  ||||||||||||||||||| |||||||| |||||||||| ||||    
T  16979697 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaacccaaattccaaatttgataggaaactcaacctatgtttattctacagcctg 16979796  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  16979797 aacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 16979847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 55291828 - 55291757
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55291828 tttcatcaacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 55291757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 22652597 - 22652708
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||| |||||||||||| | |||||||||| |    
T  22652597 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcactagattacctactc 22652696  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  22652697 ttt-aacaatcaa 22652708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 43549882 - 43549811
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43549882 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 43549811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 18893497 - 18893579
Alignment:
Q  49 aaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  18893497 aaaacccaaattttcatccacccaaaccccaaatttgatagaaaacttaacctatgattattccacaacgtgaacatcaattc 18893579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 49968993 - 49968901
Alignment:
Q  263 ctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| |||||| |||||||||||||||| ||||||||||||||||||| ||| |||||||| |||| ||||||||||| ||||||||||||||    
T  49968993 ctactattaaatcaaccaattacaacttataaacctaattcccaaattctcaaaactacaagctacaacctgttaaattcaattttcagaatc 49968901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 10555132 - 10555203
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10555132 tttcatctaccgaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatcaattc 10555203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 46722801 - 46722742
Alignment:
Q  72 aaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46722801 aaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 46722742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 6003025 - 6003147
Alignment:
Q  77 ccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattg 176  Q
    |||||||||||||||||| | ||||| | ||| |||||||||| |||| ||| |   |  ||||||||||||||||| ||||||||||| ||||||||||    
T  6003025 ccaaatttgataggaaacattacctagggttactctacaacctaaacaacaactttcaaattaattcattggattacttacactttcaagaatcaaattg 6003124  T
Q  177 taattcaaaaccctaacttcttt 199  Q
    |||||||||||||||| ||||||    
T  6003125 taattcaaaaccctaatttcttt 6003147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 9511052 - 9510970
Alignment:
Q  261 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||  || |||||||| |||||||||||||||||||    
T  9511052 ttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctaccacctgttaaatcca 9510970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 9519027 - 9518945
Alignment:
Q  261 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||  || |||||||| |||||||||||||||||||    
T  9519027 ttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctaccacctgttaaatcca 9518945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 24177921 - 24177843
Alignment:
Q  136 gttaattcattggattacctacactttcaacaatcaaattgtaattcaaaaccctaacttcttttcaaaactctaactt 214  Q
    ||||||||| ||| || ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  24177921 gttaattcaatggtttgcctactctttcaacaatcaaattgcaattcaaaaccctaacttctttttaaaactctaactt 24177843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 29907420 - 29907569
Alignment:
Q  20 ctctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 119  Q
    ||||||||||| | |||||||| || ||||||| ||||||||||| |||||||||  ||||||||||||||||| |  ||||||| ||||||| ||||      
T  29907420 ctctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctatgtttattctgcaactc 29907519  T
Q  120 gaacatcaattcatatgttaattcattggattacctacactttcaacaat 169  Q
    ||||| ||||  |||   ||||||||   |||||||||||||||||||||    
T  29907520 gaacaccaataaataccctaattcatcatattacctacactttcaacaat 29907569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 29948586 - 29948735
Alignment:
Q  20 ctctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 119  Q
    ||||||||||| | |||||||| || ||||||| ||||||||||| |||||||||  ||||||||||||||||| |  ||||||| ||||||| ||||      
T  29948586 ctctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctatgtttattctgcaactc 29948685  T
Q  120 gaacatcaattcatatgttaattcattggattacctacactttcaacaat 169  Q
    ||||| ||||  |||   ||||||||   |||||||||||||||||||||    
T  29948686 gaacaccaataaataccctaattcatcatattacctacactttcaacaat 29948735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 29997740 - 29997889
Alignment:
Q  20 ctctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 119  Q
    ||||||||||| | |||||||| || ||||||| ||||||||||| |||||||||  ||||||||||||||||| |  ||||||| ||||||| ||||      
T  29997740 ctctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctatgtttattctgcaactc 29997839  T
Q  120 gaacatcaattcatatgttaattcattggattacctacactttcaacaat 169  Q
    ||||| ||||  |||   ||||||||   |||||||||||||||||||||    
T  29997840 gaacaccaataaataccctaattcatcatattacctacactttcaacaat 29997889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 12155247 - 12155143
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    ||||||| ||||||||||| ||  ||| | ||||||  |||||||||||||| ||||||||||   ||||||||||||||| ||||||||||||||||||    
T  12155247 acccaaatcccaaatttgacagagaacattacctatagttattctacaacctcaacatcaattttcatgttaattcattgggttacctacactttcaaca 12155148  T
Q  168 atcaa 172  Q
    |||||    
T  12155147 atcaa 12155143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 48043745 - 48043638
Alignment:
Q  20 ctctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 119  Q
    ||||||||||| | || ||||| || ||||||| ||||||||||| ||||||||| ||||||||  |||||||||| |||||||| |||||||||||| |    
T  48043745 ctctacgggaaga-actagttttcatccaaaaacccaatttttcaaccacccaaatcccaaattcaataggaaactcaacctatgtttattctacaactt 48043647  T
Q  120 gaacatcaa 128  Q
    |||||||||    
T  48043646 gaacatcaa 48043638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 6820011 - 6820066
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6820011 cccaaatttgttaggaaacttaacctatgattattctacaacctgaacatcaattc 6820066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 3160838 - 3160733
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    |||||||||| |||||||| |   ||||  |||||||||||||| ||||||||||  ||| ||||||||||| ||||||||| |||||||||||||||||    
T  3160838 cccaaatttggtaggaaacattgtctattgttattctacaacctaaacatcaatttttatattaattcattgaattacctactctttcaacaatcaaatt 3160739  T
Q  176 gtaatt 181  Q
    | ||||    
T  3160738 gcaatt 3160733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 35961049 - 35960972
Alignment:
Q  277 accaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||||||||||||||||||| |||||||| || |||| |||||||| || |||||||| |||||||||||||    
T  35961049 accaattacaacttctaaacctaatttccaaatttccaaaacttcaacctacaacttgttaaattcaattttcagaat 35960972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 43929219 - 43929284
Alignment:
Q  63 catccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaa 128  Q
    |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  43929219 catctacccaaatcccaaatttgataggaaacttaacctacgattattctacaacctaaacatcaa 43929284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 3527422 - 3527271
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaa-cct 119  Q
    |||||||||| | |||  ||| || ||||||| |||||||| || ||||||||| ||||||||  |||||||||| |||||||| |||||||||||  ||    
T  3527422 tctacgggaagaaacctattttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaacctatgtttattctacaattct 3527324  T
Q  120 gaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||| ||| | | || ||||||||| ||| |||||||| ||||||||||||||    
T  3527323 gaacctcattccttacgttaattcaatggcttacctactctttcaacaatcaa 3527271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 5224148 - 5224219
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||| |||||||    
T  5224148 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattc 5224219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 341
Target Start/End: Complemental strand, 19568343 - 19568264
Alignment:
Q  262 tctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatc 341  Q
    ||||| |||| ||| |||||||||||||||||| |||||||||||||||  || ||||||||||||| ||||||||||||    
T  19568343 tctactattacaactaccaattacaacttctaaccctaattcccaaattcccaaaactacaacctacaacctgttaaatc 19568264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 26054661 - 26054590
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||| |||||||    
T  26054661 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattc 26054590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 13522448 - 13522391
Alignment:
Q  208 ctaacttcttttcacaaccctaacttcattaacatcttaattccaacaatcaattcta 265  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  13522448 ctaacttcttttcaaaactctaacttcattaacatcttaatttcaacaatcaattcta 13522391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 16643926 - 16643979
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  16643926 caaatttgttaggaagcttaacctatgattattctacaacctgaacatcaattc 16643979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 24152593 - 24152540
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  24152593 caaatttgttatgaaacttaacctatgattattctacaacctgaacatcaattc 24152540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 33565018 - 33565095
Alignment:
Q  277 accaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||||||||||||||||||| |||||||  || |||| |||||||| || |||||||| |||||||||||||    
T  33565018 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaat 33565095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 50243656 - 50243709
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  50243656 caaatttgttaggaaacttaacctatgattattctacaacatgaacatcaattc 50243709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 354
Target Start/End: Original strand, 37038978 - 37039058
Alignment:
Q  275 caaccaattacaacttctaaacctaatt-cccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||||||||| ||| ||||||| ||||||||  || ||||||||||||| || ||||||||||||||||||||||    
T  37038978 caaccaattacaacttttaaccctaatttcccaaattcccaaaactacaacctacaacatgttaaatccaattttcagaat 37039058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 10833516 - 10833461
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  10833516 cccaaatttgataggaaacttaacctatgattattctgcaatctggacatcaattc 10833461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 354
Target Start/End: Original strand, 11563654 - 11563733
Alignment:
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||||||||| |||||||||||||||||||  || ||||||||||||| || ||||||||   |||||||||||    
T  11563654 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaacttgttaaatttgattttcagaat 11563733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 15465920 - 15465991
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| |||| ||||||||||||||| |||||||| |||||||||| ||||||| |||||||    
T  15465920 tttcatcaacccaaatcccatatttgataggaaactcaacctatgtttattctacagcctgaacttcaattc 15465991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 354
Target Start/End: Complemental strand, 42324094 - 42324015
Alignment:
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||||||||||||| ||||||| |||||||  || ||||||||||||| || ||| |||| |||||||||||||    
T  42324094 caaccaattacaacttctaaccctaatttccaaattcccaaaactacaacctacaacatgtcaaattcaattttcagaat 42324015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 6805026 - 6804985
Alignment:
Q  208 ctaacttcttttcacaaccctaacttcattaacatcttaatt 249  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6805026 ctaacttcttttcacaaccctaacttcattaacatcttaatt 6804985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 13185834 - 13185903
Alignment:
Q  285 caacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||||||||||||||||||||||| || ||||||||||||| || |||||||| | ||||| |||||    
T  13185834 caacttctaaacctaattcccaaatttccaaaactacaacctacaacttgttaaattcgatttttagaat 13185903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 355
Target Start/End: Complemental strand, 45530725 - 45530644
Alignment:
Q  275 caaccaattacaacttctaaacctaattcc-caaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||||||||||||||||| ||||||| | ||||||  || |||||||||| || ||||||||||| ||||||||||||||    
T  45530725 caaccaattacaacttctaaccctaatttcgcaaattcccaaaactacaacccacaacctgttaaattcaattttcagaatc 45530644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 10311455 - 10311510
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||    
T  10311455 aacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctac 10311510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 10563636 - 10563691
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||||||| ||||    
T  10563636 aacaaccaattacaacttcaaaacctaattcccaaatttccataactacaaactac 10563691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 17044894 - 17044949
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  17044894 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 17044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 17518997 - 17518942
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  17518997 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 17518942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 17533859 - 17533804
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  17533859 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 17533804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 40807924 - 40807979
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  40807924 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 40807979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 49900658 - 49900713
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  49900658 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 49900713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 50348150 - 50348095
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  50348150 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 50348095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 347
Target Start/End: Original strand, 11259359 - 11259433
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattt 347  Q
    ||||| ||||||||||||| |||||||||||||||||| ||| |||||||| |||| || || ||||| ||||||    
T  11259359 aacaatcaattacaacttcaaaacctaattcccaaattctcataactacaatctacaacatgctaaattcaattt 11259433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 24177847 - 24177790
Alignment:
Q  286 aacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    ||||| ||||| |||||||||||||| || |||||||||||||||||| |||||||||    
T  24177847 aacttttaaacataattcccaaatttccaaaactacaacctaccacctattaaatcca 24177790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 12151139 - 12151063
Alignment:
Q  96 taacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||||||||  |||||||| ||| | | ||||||||   ||||||||||||||| |||||||||||||||||||||||    
T  12151139 taacctattgttattctaaaacataagcatcaattttcatgttaattcattgggttacctacactttcaacaatcaa 12151063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 35064658 - 35064610
Alignment:
Q  280 aattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||||    
T  35064658 aattacaacttcaaaacctaattcccaaatttccataactacaacctac 35064610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 12917515 - 12917404
Alignment:
Q  86 ataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaattcaaa 185  Q
    ||||||||||  ||||||||||||| ||||||||||||| |||||  ||  ||| ||||| |||||||||||  || |||||||||| ||  | ||||||    
T  12917515 ataggaaactctacctatgattattttacaacctgaacaccaattattaccttacttcatcggattacctacttttccaacaatcaattttaatttcaaa 12917416  T
Q  186 accctaacttct 197  Q
    | ||||| ||||    
T  12917415 aacctaatttct 12917404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 22306707 - 22306652
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||| ||||||  || |||||||||||||    
T  22306707 aacaaccaattacaacttcaaaacctaattcacaaattcccataactacaacctac 22306652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 40812761 - 40812816
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||| ||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  40812761 aacaatcaattacaacttcaaaacctaattcccaaattcccataactacaacctac 40812816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 41172495 - 41172440
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||| ||||  || |||||||||||||    
T  41172495 aacaaccaattacaacttcaaaacctaattccctaattcccataactacaacctac 41172440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 11885669 - 11885601
Alignment:
Q  285 caacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||| ||| |||||||| ||||||  || ||||||||||||| || ||||||||||||||||||||||    
T  11885669 caacttttaaccctaattctcaaattccca-aactacaacctacaacttgttaaatccaattttcagaat 11885601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 15413268 - 15413337
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| |||||||||| |||||||||||||||| ||||||    
T  15413268 acttttaaccctaattcccaaattctcaaaaactaaaacctaccacatgttaaatccaatttttagaatc 15413337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 17464015 - 17464084
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  17464015 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 17464084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 34160163 - 34160232
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  34160163 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 34160232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 45577766 - 45577697
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  45577766 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 45577697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 50351043 - 50350930
Alignment:
Q  62 tcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactt 161  Q
    ||||| ||||||| ||||||||| |||| |||||   |||||| ||||| ||||||||||||||||||   ||   ||  |||||||||||||||| |||    
T  50351043 tcatctacccaaatcccaaattttatagaaaactcttcctatgtttattatacaacctgaacatcaatctgtacactatgtcattggattacctacgctt 50350944  T
Q  162 tcaacaatcaaatt 175  Q
    | |||||| |||||    
T  50350943 ttaacaattaaatt 50350930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 55477329 - 55477398
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  55477329 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 55477398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 14641677 - 14641638
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaa 308  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  14641677 ttaaatcaacaaattacaacttctaaacctaattcccaaa 14641638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 15931624 - 15931577
Alignment:
Q  280 aattacaacttctaaacctaattcccaaattttcagaactacaaccta 327  Q
    |||||||||||| |||||||||||| ||||| ||| ||||||||||||    
T  15931624 aattacaacttcgaaacctaattccaaaattctcataactacaaccta 15931577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 17047054 - 17047109
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||| |||||||||||||   | |||||||||||||    
T  17047054 aacaaccaattacaacttcaaaacttaattcccaaattcaaataactacaacctac 17047109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 17539034 - 17539089
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||||||||||| |||| |||||||||| |||||||  || |||||||||||||    
T  17539034 aacaaccaattacatcttcaaaacctaatttccaaattcccataactacaacctac 17539089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 44274346 - 44274401
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||  |||||||||||||  || |||||||||||||    
T  44274346 aacaaccaattacaacttcaaaatataattcccaaattcccataactacaacctac 44274401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 13151102 - 13151044
Alignment:
Q  298 taattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  13151102 taattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 13151044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 13153570 - 13153512
Alignment:
Q  298 taattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  13153570 taattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 13153512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 1864478 - 1864409
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || ||||||||||||||| |||||||    
T  1864478 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaatc 1864409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 10247047 - 10246978
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||| ||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  10247047 acttttaaccctaatttccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 10246978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 15978372 - 15978441
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || | | ||||||| || |||||||||||||||||||||||    
T  15978372 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatc 15978441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 328
Target Start/End: Original strand, 17694001 - 17694050
Alignment:
Q  279 caattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||| ||| ||||||| ||||||| || |||||||||||||    
T  17694001 caattacaacttcaaaatctaattcacaaatttccataactacaacctac 17694050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 28847944 - 28847875
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || | | ||||||| || |||||||||||||||||||||||    
T  28847944 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatc 28847875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 6468450 - 6468390
Alignment:
Q  296 cctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||| ||| || ||| ||||||| || ||||||||| |||||||||||||    
T  6468450 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatctaattttcagaatc 6468390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 325
Target Start/End: Original strand, 35354530 - 35354582
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacc 325  Q
    ||||| ||||||||||||| |||||||||| |||||||  || ||||||||||    
T  35354530 aacaatcaattacaacttcaaaacctaatttccaaattcccataactacaacc 35354582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 102; Significance: 1e-50; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 169223 - 169336
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  169223 aactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 169322  T
Q  118 ctgaacatcaattc 131  Q
    |||||| |||||||    
T  169323 ctgaacttcaattc 169336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 176576 - 176689
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  176576 aactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 176675  T
Q  118 ctgaacatcaattc 131  Q
    |||||| |||||||    
T  176676 ctgaacttcaattc 176689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 31922 - 31976
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaaccta 327  Q
    ||||||||||||||||||| ||||||||||||||||||  || ||||||||||||    
T  31922 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaaccta 31976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 37229 - 37283
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaaccta 327  Q
    ||||||||||||||||||| ||||||||||||||||||  || ||||||||||||    
T  37229 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaaccta 37283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 77615 - 77670
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||| ||||||||||| ||||||||||| ||||||  || |||||||||||||    
T  77615 aacaacctattacaacttcaaaacctaattctcaaattcccataactacaacctac 77670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 76 - 215
Target Start/End: Original strand, 12081 - 12219
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||| ||||||||| ||    
T  12081 cccaaatttgataggaaacatcacctatgattattctacaacctgaacatcaattcttatgttaattcattgggttacctactcttt-aacaatcaattt 12179  T
Q  176 gtaattcaaaaccctaacttcttttcaaaactctaacttc 215  Q
    | |||||||||||||| |||||||||||||||||||||||    
T  12180 gaaattcaaaaccctagcttcttttcaaaactctaacttc 12219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 347
Target Start/End: Original strand, 12323 - 12397
Alignment:
Q  274 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacc-tgttaaatccaattt 347  Q
    |||||| ||||||||||||||||||||||| ||||||| || ||||||||||||| ||| |||||||| ||||||    
T  12323 acaacctattacaacttctaaacctaattctcaaatttccaaaactacaacctacaaccatgttaaattcaattt 12397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 12212 - 12253
Alignment:
Q  227 ctaacttcattaacatcttaattccaacaatcaattctacaa 268  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12212 ctaacttcattaacatcttaattccaacaatcaattctacaa 12253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 226 - 343
Target Start/End: Original strand, 16485 - 16602
Alignment:
Q  226 cctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacc 325  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||    
T  16485 cctaacttcattaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattgccaaatttccaaaactacaacc 16584  T
Q  326 taccacctgttaaatcca 343  Q
    |||||| |||||||||||    
T  16585 taccacatgttaaatcca 16602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 14856 - 14703
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||||||||||  ||  || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  14856 aactctacgggaacagacctattatcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaac 14757  T
Q  118 ctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||||| ||||||| |||||||||| ||| |||||||||| |||| |||||||||    
T  14756 ctgaacttcaattcttatgttaatttattagattacctactcttt-aacaatcaa 14703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 23914 - 23761
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||||||||||  ||  || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  23914 aactctacgggaacagacctattatcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaac 23815  T
Q  118 ctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||||| ||||||| |||||||||| ||| |||||||||| |||| |||||||||    
T  23814 ctgaacttcaattcttatgttaatttattagattacctactcttt-aacaatcaa 23761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 94; Significance: 8e-46; HSPs: 4)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 218 - 343
Target Start/End: Original strand, 21484 - 21609
Alignment:
Q  218 ttcacaaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaa 317  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||    
T  21484 ttcaaaaccctaacttcattaacatcttaatttaaacaatcaattctacaattaaaacaaccaattacaacttctaaacataattcccaaatttccaaaa 21583  T
Q  318 ctacaacctaccacctgttaaatcca 343  Q
    |||||| |||||| ||||||||||||    
T  21584 ctacaagctaccatctgttaaatcca 21609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 68 - 196
Target Start/End: Original strand, 21372 - 21500
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||| |||||  ||  |||||||||  |||||||||| |||||||||    
T  21372 acccaaatcccaaatttgatagaaaacttaaactatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaaca 21471  T
Q  168 atcaaattgtaattcaaaaccctaacttc 196  Q
    || |||||| |||||||||||||||||||    
T  21472 atgaaattgcaattcaaaaccctaacttc 21500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 29696 - 29642
Alignment:
Q  274 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  29696 acaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 29642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 35777 - 35700
Alignment:
Q  49 aaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatc 126  Q
    ||||||| | ||| |||| || ||||||||||  ||||| |||||||||| || |||||||||||||| || ||||||    
T  35777 aaaatcccaatttccatcgactcaaaccccaatattgattggaaacttaatctgtgattattctacaatctaaacatc 35700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 7279 - 7166
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |    
T  7279 aactctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacagc 7180  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||| ||||    
T  7179 ctgaacatcgattc 7166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 3747 - 3860
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||||||||||||||||||||||| || || |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  3747 aactctacgggaacagaccagttttcagccgaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattcaacaac 3846  T
Q  118 ctgaacatcaattc 131  Q
    ||||||||| ||||    
T  3847 ctgaacatcgattc 3860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 28497 - 28653
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||||||| | |||||||| ||  |||||| || | ||| || | ||||||| ||||||||||| ||||||| | || ||| |||||||||||||    
T  28497 aactctacgggaagaaaccagttttcacacaaaaaccccaattt-caactacccaaatcccaaatttgacaggaaacattacgtattattattctacaac 28595  T
Q  118 ctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  28596 ctgaacatcaatttttatgttaattcattagattacctacactttcaacaatcaaatt 28653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 20882 - 21032
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||    
T  20882 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctg 20981  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  20982 aacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 21032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 33937 - 34033
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctac 157  Q
    ||||||| ||||||| | |||||||| ||||||||| |||||||| |||||||||   |||||| ||||||| ||||||||||||||| |||||||||    
T  33937 tttcatcaacccaaatctcaaatttg-taggaaactcaacctatgtttattctacggtctgaacttcaattcttatgttaattcattgaattacctac 34033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 22005 - 21895
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||| |    
T  22005 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacatcaattcttatgttaattcattgaattacctactc 21906  T
Q  160 tttcaacaatca 171  Q
    ||| ||||||||    
T  21905 ttt-aacaatca 21895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 29483 - 29333
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||    
T  29483 tctacgggaacagaccagtttgcactccaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctg 29384  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  29383 aacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 29333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 28581 - 28467
Alignment:
Q  83 ttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaattc 182  Q
    |||||||||||| | || ||| |||| |||||||||||| ||||||||  ||| ||||||||||||||||||||||| |||||||||||||||| |||||    
T  28581 ttgataggaaacctcacttattattactctacaacctgaccatcaatttttatattaattcattggattacctacaccttcaacaatcaaattgcaattc 28482  T
Q  183 aaaaccctaacttct 197  Q
    |||||||||||||||    
T  28481 aaaaccctaacttct 28467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 355
Target Start/End: Complemental strand, 28451 - 28371
Alignment:
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||| || |||||||||| ||||||| |||||||  || ||||||||||||| || |||||||||||||||||||||||    
T  28451 caaccatttgcaacttctaaccctaatttccaaattcccaaaactacaacctacaacttgttaaatccaattttcagaatc 28371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 71; Significance: 4e-32; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 19072 - 18950
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||||||||| | ||||||  ||||||||||||||||||||| |||  ||| ||| |||||||||||||||||||||||||||||||||||    
T  19072 cccaaatttgataggaaacatcacctattgttattctacaacctgaacatcgatttttatattagttcattggattacctacactttcaacaatcaaatt 18973  T
Q  176 gtaa-ttcaaaaccctaacttct 197  Q
    | || || |||||||||||||||    
T  18972 gcaatttaaaaaccctaacttct 18950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 159074 - 158971
Alignment:
Q  83 ttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaattc 182  Q
    |||||||||||| | || ||| |||| |||||||||||||||||||||  ||| |||||||||||||| |||||||| |||||||||||||||  |||||    
T  159074 ttgataggaaaccttacttattattactctacaacctgaacatcaatttttatattaattcattggatcacctacaccttcaacaatcaaatttcaattc 158975  T
Q  183 aaaa 186  Q
    ||||    
T  158974 aaaa 158971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 355
Target Start/End: Complemental strand, 158944 - 158864
Alignment:
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||| || |||||||||| |||||||||||||||  || ||||||||||||| || |||||||||||||||| ||||||    
T  158944 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaatccaatttttagaatc 158864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 16718 - 16667
Alignment:
Q  146 tggattacctacactttcaacaatcaaattgtaattcaaaaccctaacttct 197  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  16718 tggattacctacactttgaacaatcaaattgcaatttaaaaccctaacttct 16667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 197
Target Start/End: Complemental strand, 38662 - 38534
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    ||||||| | ||||||||| | ||||| | ||||||  |||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  38662 acccaaatctcaaatttgacaagaaacattacctattgttattccacaacctgaacatcaattttcatgttaattcattggattacctacactttcaaca 38563  T
Q  168 atcaaattgtaattcaaaaccctaacttct 197  Q
    |||||||||||||| |||| ||||||||||    
T  38562 atcaaattgtaatttaaaa-cctaacttct 38534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 8625 - 8777
Alignment:
Q  20 ctctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 119  Q
    ||||||||||| | || ||||| || ||||||| ||||||||||| ||||||||| |||||||||||||| |||||  ||||||||||| ||| ||||||    
T  8625 ctctacgggaagaaactagttttcagccaaaaacccaatttttcaaccacccaaatcccaaatttgatagaaaactctacctatgattactctgcaacct 8724  T
Q  120 gaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||||| |||||  ||  |||||||||  |||||||||| ||||||||||||||    
T  8725 gaacaccaattattaccttaattcatctgattacctactctttcaacaatcaa 8777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 68; Significance: 3e-30; HSPs: 4)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 1722 - 1872
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| ||||||| || ||||||||||||||||| |||||||| |||||||||| ||||    
T  1722 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaacccaaatccaaaatttgataggaaactcaacctatgtttattctacagcctg 1821  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||    
T  1822 aacttcaattcttatgttaattcattgaattacctactcttt-aacaatcaa 1872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 262 - 343
Target Start/End: Complemental strand, 10888 - 10809
Alignment:
Q  262 tctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatcca 343  Q
    ||||| |||| |||||||||||||||||||||| |||||||||||||||  || ||||| ||||||| ||||||||||||||    
T  10888 tctactattacaacaaccaattacaacttctaaccctaattcccaaattccca-aacta-aacctacaacctgttaaatcca 10809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 42153 - 42193
Alignment:
Q  91 aaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  42153 aaacttaacctatgattattctacaacatgaacatcaattc 42193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 308
Target Start/End: Complemental strand, 5156 - 5124
Alignment:
Q  276 aaccaattacaacttctaaacctaattcccaaa 308  Q
    ||||||||||||||||||| |||||||||||||    
T  5156 aaccaattacaacttctaaccctaattcccaaa 5124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 35716 - 35602
Alignment:
Q  83 ttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaattc 182  Q
    |||||||||||| | || ||| |||| |||||||||| ||||||||||  ||| |||||||||||||||| |||||| |||||||||||||||| |||||    
T  35716 ttgataggaaacctcacttattattactctacaacctcaacatcaatttttatattaattcattggattatctacaccttcaacaatcaaattgcaattc 35617  T
Q  183 aaaaccctaacttct 197  Q
    |||||||||||||||    
T  35616 aaaaccctaacttct 35602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 355
Target Start/End: Complemental strand, 35586 - 35506
Alignment:
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||| || |||||||||| | |||||||||||||  || ||||||||||||| |  |||||||| ||||||||||||||    
T  35586 caaccatttgcaacttctaaccttaattcccaaattcccaaaactacaacctacaagttgttaaattcaattttcagaatc 35506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 9009 - 8897
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||  |||||||||| |||||| | |||||||||||||||||||||||||| || ||||||||||| || ||||||| || ||||||||||||||    
T  9009 cccaaattcaataggaaactcaacctaagtttattctacaacctgaacatcaattcttacgttaattcattcgactacctactctctcaacaatcaaatt 8910  T
Q  176 gtaattcaaaacc 188  Q
    | |||||||||||    
T  8909 gaaattcaaaacc 8897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 70081 - 69970
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||  || ||||||| ||||||| ||||||| ||||||||||||||||||||||||| |    
T  70081 tttcatcaacccaaatcccaaatttgataggaaactcaacctattttttttctacagcctgaacttcaattcttatgttaattcattggattacctactc 69982  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  69981 ttt-aacaatcaa 69970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 72278 - 72333
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  72278 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatcaattc 72333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 64; Significance: 6e-28; HSPs: 4)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 13730 - 13829
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    |||| ||||||||||||||||||| || | ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  13730 aactttacgggaacagaccagttttcagcgaaaaaccttatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattaatctgcaac 13829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 308
Target Start/End: Original strand, 13872 - 13911
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaa 308  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  13872 ttaaatcaaccaattacaacttctaaacctaattcccaaa 13911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 8907 - 8951
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaattttt 62  Q
    |||||||||||||||||||||||| || ||||||| |||||||||    
T  8907 aactctacgggaacagaccagttttcagccaaaaacccaattttt 8951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 19924 - 19962
Alignment:
Q  316 aactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  19924 aactacaacctacaacttgttaaatccaattttcagaat 19962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 35305 - 35424
Alignment:
Q  49 aaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattgg 148  Q
    ||||||| | ||| |||| ||| ||| ||||||||  |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  35305 aaaatcccaatttacatcaacctaaatcccaaattcaataggaaactcaacctatgtttattctacaacctgaacatcaattcttatgttaatttattgg 35404  T
Q  149 attacctacactttcaacaa 168  Q
    ||||| |||||||| |||||    
T  35405 attacatacacttttaacaa 35424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 35420 - 35457
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaatt 310  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  35420 aacaaccaattacgacttcaaaacctaattcccaaatt 35457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 8784 - 8895
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| || |||| | |||||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||| |    
T  8784 tttcatcaactcaaatctcaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactc 8883  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  8884 ttt-aacaatcaa 8895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 18912 - 18824
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgat 106  Q
    ||||||||| |||||||||||||| || ||||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||    
T  18912 aactctacgagaacagaccagttttcagccaaaaaccaaaattttcatccacccaaaccacaaatttgataggaaacttaacctatgat 18824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 18770 - 18731
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaa 308  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  18770 ttaaatcaaccaattacaacttctaaacctaattcccaaa 18731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 61; Significance: 4e-26; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 23458 - 23573
Alignment:
Q  81 atttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaat 180  Q
    |||||| ||||||| | |||||| |||||||||||||||||| |||||||   ||||||||||||| ||||||||||||||| |||||| ||||||||||    
T  23458 atttgacaggaaacattacctattattattctacaacctgaaaatcaattttcatgttaattcatttgattacctacacttttaacaataaaattgtaat 23557  T
Q  181 tcaaaaccctaacttct 197  Q
    | |||| ||||||||||    
T  23558 ttaaaa-cctaacttct 23573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 80 - 200
Target Start/End: Original strand, 26535 - 26655
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaa 179  Q
    |||||||||| |||| | ||||| | ||| |||||||||| |||||||| |   |  |||||||||  |||||| ||||||||||| |||||||||| ||    
T  26535 aatttgatagaaaacattacctagggttactctacaacctaaacatcaactttcacattaattcatcagattacttacactttcaagaatcaaattgcaa 26634  T
Q  180 ttcaaaaccctaacttctttt 200  Q
    |||||||||||||||||||||    
T  26635 ttcaaaaccctaacttctttt 26655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 613 - 561
Alignment:
Q  294 aacctaattcccaaattttcagaactacaacctaccacctgttaaatccaatt 346  Q
    |||||||||| |||||  ||| ||||||||||||| || ||||||||||||||    
T  613 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaatccaatt 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 9920 - 9991
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9920 tttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaacatcaattc 9991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 31046 - 31117
Alignment:
Q  282 ttacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||||| ||| |||||||||||||||  || ||||||||||||| || ||||||||||||||||||||||    
T  31046 ttacaacttttaaccctaattcccaaattccca-aactacaacctacaacttgttaaatccaattttcagaat 31117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 40039 - 39968
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40039 tttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaacatcaattc 39968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 59874 - 59767
Alignment:
Q  69 cccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaa 168  Q
    |||||| |||||||||| |||||||| |   ||||  |||||||||||||| ||||||||||  ||| |||||||||||||||||||||  |||||||||    
T  59874 cccaaatcccaaatttggtaggaaacattgtctattgttattctacaacctaaacatcaatttttatattaattcattggattacctactatttcaacaa 59775  T
Q  169 tcaaattg 176  Q
    ||||||||    
T  59774 tcaaattg 59767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 16940 - 17047
Alignment:
Q  69 cccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaa 168  Q
    |||||| |||||||||| |||||||| |   ||||  |||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||||||||||    
T  16940 cccaaatcccaaatttggtaggaaacattttctattgttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaa 17039  T
Q  169 tcaaattg 176  Q
    ||||||||    
T  17040 tcaaattg 17047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 26471 - 26578
Alignment:
Q  69 cccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaa 168  Q
    |||||| |||||||||| |||||||| |   ||||  |||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||||||||||    
T  26471 cccaaatcccaaatttggtaggaaacattttctattgttattctacaacctgaacatcaatttttatattaattcattggattacctactctttcaacaa 26570  T
Q  169 tcaaattg 176  Q
    ||||||||    
T  26571 tcaaattg 26578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 13240 - 13354
Alignment:
Q  83 ttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaattc 182  Q
    |||||||||||| | || ||| |||| | |||||||||||||||||||  ||| | |||||||||| |||||||||  |||||||||||||||| |||||    
T  13240 ttgataggaaacctcacttattattactttacaacctgaacatcaatttttatatcaattcattgggttacctacatcttcaacaatcaaattgcaattc 13339  T
Q  183 aaaaccctaacttct 197  Q
    |||||||||||||||    
T  13340 aaaaccctaacttct 13354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 355
Target Start/End: Original strand, 13370 - 13450
Alignment:
Q  275 caaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||| || |||||| ||| |||||||||||||||  || |||| |||||||| || |||||||| ||||||||||||||    
T  13370 caaccatttgcaacttttaaccctaattcccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaatc 13450  T

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Target: scaffold1800 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 446 - 567
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattca--tatgttaattcattggattacctacactttcaacaatcaaa 173  Q
    |||||||||||||| |||| | ||||||  ||||||||||||| |||||||||||    ||| ||||||||||| |||||||||||||||||||||||||    
T  446 cccaaatttgatagaaaacattacctattgttattctacaacccgaacatcaattgtattatattaattcattgaattacctacactttcaacaatcaaa 545  T
Q  174 ttgtaattcaaaaccctaacttct 197  Q
    ||| ||||||||  ||||||||||    
T  546 ttgcaattcaaa--cctaacttct 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 2638 - 2774
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| || |||| |||||||||||||||||||||||| ||||||||||| |||| ||||||| |||||  ||  |||||||||  |||||||||| |    
T  2638 tttcatctactcaaatcccaaatttgataggaaacttaacgtatgattattcaacaatctgaacaccaattattaccttaattcatcagattacctactc 2737  T
Q  160 tttcaacaatcaaattgtaattcaaaaccctaacttct 197  Q
    ||||||||||| |||| |||||  ||||||||| ||||    
T  2738 tttcaacaatc-aattttaatttcaaaccctaatttct 2774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 18958 - 19066
Alignment:
Q  79 aaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgta 178  Q
    ||||||||||||||||||||| |||||||||||||||||||||| | |||||   |   | |||||||||||||||||||| |||||||||||||||| |    
T  18958 aaatttgataggaaacttaacatatgattattctacaacctgaataacaattttcaccatgattcattggattacctacac-ttcaacaatcaaattgaa 19056  T
Q  179 attcaaaacc 188  Q
    ||||||||||    
T  19057 attcaaaacc 19066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 40373 - 40276
Alignment:
Q  137 ttaattcattggattacctacactttcaacaatcaaattgtaattcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttc 234  Q
    |||||||||  |||||| ||||||||||| |||||||||  ||||||||||||||||||||||||| ||| |||||||||||||| || |||||||||    
T  40373 ttaattcatcagattacttacactttcaagaatcaaatttcaattcaaaaccctaacttcttttcacaaccctaacttcttttcaaaatcctaacttc 40276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 40311 - 40248
Alignment:
Q  180 ttcaaaaccctaacttcttttcaaaactctaacttcttttcacaaccctaacttcattaacatc 243  Q
    |||| |||||||||||||||||||||  |||||||||||||| ||||||||||||  |||||||    
T  40311 ttcacaaccctaacttcttttcaaaatcctaacttcttttcaaaaccctaacttctataacatc 40248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 355
Target Start/End: Complemental strand, 2155 - 2063
Alignment:
Q  263 ctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| |||||| |||||||||||||||| |||||||||||||||||||| || ||||||||||||| || |||||||| ||||||||| ||||    
T  2155 ctactattaaaccaaccaattacaacttataaacctaattcccaaatttccaaaactacaacctacaacatgttaaattcaattttcaaaatc 2063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 188
Target Start/End: Original strand, 1094 - 1222
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| || ||||||||||||||||||||  |||||||||||||||||||||| | ||| |   |   | ||||||||||||||||| ||    
T  1094 tttcatctacccaaatccaaaatttgataggaaacttaatatatgattattctacaacctgaataacaagtttgaccatgattcattggattacctagac 1193  T
Q  160 tttcaacaatcaaattgtaattcaaaacc 188  Q
    ||||||||| ||||||| |||||||||||    
T  1194 tttcaacaaccaaattgaaattcaaaacc 1222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 188
Target Start/End: Original strand, 6600 - 6728
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||||||| || ||||||||||||||||||||  |||||||||||||||||||||| | ||| |   |   | ||||||||||||||||| ||    
T  6600 tttcatctacccaaatccaaaatttgataggaaacttaatatatgattattctacaacctgaataacaagtttgaccatgattcattggattacctagac 6699  T
Q  160 tttcaacaatcaaattgtaattcaaaacc 188  Q
    ||||||||| ||||||| |||||||||||    
T  6700 tttcaacaaccaaattgaaattcaaaacc 6728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 11047 - 11158
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| ||| ||| |||||||||||||||||||| ||  |||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||| |    
T  11047 tttcatcaaccaaaatcccaaatttgataggaaactcaagatatgtttattctacagcctgaacttcaattcttatgttaattcattgaattacctactc 11146  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  11147 ttt-aacaatcaa 11158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 954 - 1033
Alignment:
Q  49 aaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaa 128  Q
    ||||||| | |||||| | ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  954 aaaatcccaattttcaccaacccaaatcccaaatttgataggaaacttaacctatgattatcctacaacctgaacatcaa 1033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 8005 - 8060
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8005 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 8060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 261 - 355
Target Start/End: Original strand, 8557 - 8652
Alignment:
Q  261 ttctacaattaaaacaaccaattacaacttctaaacctaatt-cccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||||| |||||| |||||||||||||||||||| ||||||| ||||||||  || ||||||||||||| ||||||||||| ||||||||||||||    
T  8557 ttctactattaaatcaaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatc 8652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 6774 - 6620
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||| ||| | |||||||| || |||||||  |||||||||| ||||||||| |||||||||||||| |||||  || |||||||| ||||||||    
T  6774 aactctacgagaagaaaccagttttcagccaaaaactcaatttttcaaccacccaaatcccaaatttgatagaaaactctacttatgattactctacaac 6675  T
Q  118 ctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
     ||||||  ||||  ||  |||||||||   ||||||||| ||||||||||||||    
T  6674 atgaacacgaattattaccttaattcatctaattacctactctttcaacaatcaa 6620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 5883 - 5732
Alignment:
Q  20 ctctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacct 119  Q
    ||||||||||| | |||||||| || ||||||| | |||||| || ||||||||| ||||||||  || ||||||| |||||||| ||||||||||||||    
T  5883 ctctacgggaagaaaccagttttcagccaaaaacctaatttt-caaccacccaaatcccaaattcaatgggaaactcaacctatgtttattctacaacct 5785  T
Q  120 gaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||||||||||  ||   |||||||||| |||| |||   |||||||||||||    
T  5784 gaacatcaatttgtacactaattcattgaattatctagtttttcaacaatcaa 5732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 81501 - 81577
Alignment:
Q  279 caattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||||| ||||||| ||||||    
T  81501 caattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaatttttagaatc 81577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 113093 - 113017
Alignment:
Q  272 aaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaatttt 348  Q
    |||||||||||||||||||||||||||||||||||||||  || || |||||||||| || |||||||| |||||||    
T  113093 aaacaaccaattacaacttctaaacctaattcccaaattcccaaaattacaacctacaacttgttaaattcaatttt 113017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 82839 - 82894
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| ||| ||||||||| ||||||||||||||||| |||||||||||||    
T  82839 cccaaatttgttagaaaacttaacgtatgattattctacaacttgaacatcaattc 82894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 117926 - 117890
Alignment:
Q  272 aaacaaccaattacaacttctaaacctaattcccaaa 308  Q
    |||||||||||||||||||||||||||||||||||||    
T  117926 aaacaaccaattacaacttctaaacctaattcccaaa 117890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 1958 - 2021
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  1958 acccaaatcccaaatttgataggaaacttaacctacgattattctacaacctaaacatcaattc 2021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 446 - 501
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||||    
T  446 aacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctac 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 8932 - 8987
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8932 cccaaatttgataggaaacttaacatatgattattctacaacctgaacatcaattc 8987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 174335 - 174264
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| | |||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  174335 tttcatctacccaaatctcaaatttgataggaaacttaacatatgattattctacaacctgaccatcaattc 174264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 52; Significance: 9e-21; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 66348 - 66202
Alignment:
Q  18 aactctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaac 117  Q
    ||||||||| |||||||||||||| ||  | |||||||    ||||||| || |||| |||||||||||||| |||||  ||||||||||||||||||||    
T  66348 aactctacgagaacagaccagttttcactccaaaatccccaatttcatcaactcaaatcccaaatttgatag-aaactctacctatgattattctacaac 66250  T
Q  118 ctgaacatcaattcatatgttaattcattggattacctacactttcaa 165  Q
    ||||||| |||||  ||  ||| ||||| ||||||||||| |||||||    
T  66249 ctgaacaccaattattaccttagttcatcggattacctactctttcaa 66202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 328414 - 328364
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaa 323  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  328414 aacaaccaattacaacttcgaaacctaattcccaaatttccataactacaa 328364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 72872 - 72909
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaatt 310  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  72872 aacaaccaattacaacttcaaaacctaattcacaaatt 72909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 110113 - 110182
Alignment:
Q  285 caacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||| ||||||||||| | |||||   || ||||||||||||| || |||||||| |||||||||||||    
T  110113 caactcctaaacctaatcctcaaatccccaaaactacaacctacaacttgttaaattcaattttcagaat 110182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 2305 - 2251
Alignment:
Q  77 ccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2305 ccaaatttgataggaaacttaacctgtgattattctacaacctgaacatcaattc 2251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 3045 - 3164
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||| ||||| |  ||||| ||||||||| |||| |||||||||||  |||  |||||||||| ||||||||||||||||||||| |||||    
T  3045 cccaaatttgataagaaacattgcctattattattctaaaaccagaacatcaatttttatactaattcattgaattacctacactttcaacaattaaatt 3144  T
Q  176 gtaattcaaaaccctaacttct 197  Q
    | |||| |||  ||||||||||    
T  3145 gcaatttaaa--cctaacttct 3164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 21817 - 21879
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 130  Q
    ||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  21817 acccaaatcccaaatttgataggaagcttaatctatgattattctacaacctgaacatcaatt 21879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 2075 - 2176
Alignment:
Q  71 caaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatc 170  Q
    |||| |||||||||||||| ||| |  ||||||||||||||||||||||||||| |||||  ||  ||| ||||| ||||||||||| ||||||||||||    
T  2075 caaatcccaaatttgatagaaaaatctacctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactctttcaacaatc 2174  T
Q  171 aa 172  Q
    ||    
T  2175 aa 2176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 50; Significance: 1e-19; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 3188 - 3095
Alignment:
Q  261 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||| ||| || |||||||||||||||||||| ||||||||| |||||  || ||||||||||||| || |||||||| |||||||||||||    
T  3188 ttctaccatttaatcaaccaattacaacttctaaccctaattcctaaattcccaaaactacaacctacaacttgttaaattcaattttcagaat 3095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 135050 - 135119
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  135050 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 135119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 137519 - 137588
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  137519 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 137588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 139988 - 140057
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  139988 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 140057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 142457 - 142526
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  142457 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 142526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 144926 - 144995
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  144926 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 144995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 135640 - 135547
Alignment:
Q  261 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||| ||||||  |||||||| ||||||||||  ||||||||||||||  || ||||||||||||| ||||||||||| |||||||||||||    
T  135640 ttctactattaaattaaccaatttcaacttctaactctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaat 135547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 49; Significance: 6e-19; HSPs: 4)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 1259 - 1207
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaatt 130  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1259 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaatt 1207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 18263 - 18201
Alignment:
Q  137 ttaattcattggattacctacactttcaacaatcaaattgtaattcaaaaccctaacttcttt 199  Q
    ||||||||| ||||||| ||||||||||| |||||||||  ||||||||||||||||||||||    
T  18263 ttaattcatcggattacttacactttcaataatcaaattacaattcaaaaccctaacttcttt 18201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 175
Target Start/End: Original strand, 28378 - 28491
Alignment:
Q  62 tcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactt 161  Q
    ||||| ||||||| ||| ||||| |||| |||||   |||||| |||||||||||||||| ||||||||  ||   ||||| |||||||||||||| |||    
T  28378 tcatctacccaaatccctaattttatagaaaactcttcctatgtttattctacaacctgaccatcaatttgtacactaattaattggattacctactctt 28477  T
Q  162 tcaacaatcaaatt 175  Q
    | |||||| |||||    
T  28478 ttaacaattaaatt 28491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 7346 - 7314
Alignment:
Q  167 aatcaaattgtaattcaaaaccctaacttcttt 199  Q
    |||||||||| ||||||||||||||||||||||    
T  7346 aatcaaattgcaattcaaaaccctaacttcttt 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 35706 - 35587
Alignment:
Q  68 acccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaaca 167  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||| | |||||  ||   |||||||||| |||| ||||  ||| ||||    
T  35706 acccaaattccaaatttgataggaaactaaacctatgattattctacaacctgaataacaatttgtacactaattcattgaattatctac-tttttaaca 35608  T
Q  168 atcaaattgtaattcaaaacc 188  Q
    |||||||| ||| ||||||||    
T  35607 atcaaattctaaatcaaaacc 35587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 917 - 972
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  917 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatcaattc 972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 18419 - 18490
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||| |||||||    
T  18419 tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcctgaacttcaattc 18490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 127611 - 127461
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    |||||||||| | ||| |||| || ||||||| |||||||| || ||||| ||| ||||||||  | |||||||| |||||||| |||||||||||  ||    
T  127611 tctacgggaagaaacctgttttcagccaaaaacccaatttt-caaccaccaaaatcccaaattcaaaaggaaactcaacctatgtttattctacaatttg 127513  T
Q  121 aacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    ||| ||| | | || ||||||||| ||| |||||||| ||||||||||||||    
T  127512 aacctcattccttacgttaattcaatggtttacctactctttcaacaatcaa 127461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 56331 - 56262
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||| ||||||||||||||    
T  56331 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatc 56262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 1 - 63
Alignment:
Q  110 tctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaa 172  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  1 tctacaacatgaacatcaattcttatgttaattctttggattacctactctttcaacaatcaa 63  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 916 - 966
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaa 128  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  916 caaatttgttaggaaacttaacctatgattattctacaacctgaacatcaa 966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 39363 - 39258
Alignment:
Q  20 ctctacgggaacagaccagtttc-caaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacc 118  Q
    ||||||||||||||||||||||  || ||||||| |||||||| || ||||||||| ||||||||  |||||||| | |||||||| ||| |||||||||    
T  39363 ctctacgggaacagaccagtttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaattcaacctatgtttaatctacaacc 39265  T
Q  119 tgaacat 125  Q
    |||||||    
T  39264 tgaacat 39258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 44028 - 43903
Alignment:
Q  46 ccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcat 145  Q
    ||||||| |||||||| || ||||||||| ||||||||  |||||||||| |||||||| |||||||||||||| ||||||||||  ||   ||||| ||    
T  44028 ccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaacctatgtttattctacaacctaaacatcaatttgtacactaattaat 43930  T
Q  146 tggattacctacactttcaacaatcaa 172  Q
    || |||| ||||  |||||||||||||    
T  43929 tgaattatctactttttcaacaatcaa 43903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 2236 - 2187
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatca 127  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2236 caaatttgttaggaaacttaacctatgattattctacaacctgaacatca 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 1187 - 1102
Alignment:
Q  269 ttaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| ||| |||| |||||||| || |||||||| |||||||||||||    
T  1187 ttaaatcaactaattacaacttctaaccctaaatcccaaattctcaaaactccaacctacaacttgttaaattcaattttcagaat 1102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 12891 - 12946
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||    
T  12891 cccaaatttgttagaaaacttaacctatgattattctacaacatgaacatcaattc 12946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 7695 - 7626
Alignment:
Q  106 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    |||||||||||||||||||||||||   | |||||||||||||||| |||||| || |||||||||||||    
T  7695 ttattctacaacctgaacatcaattttcacgttaattcattggatttcctacatttccaacaatcaaatt 7626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 66 - 132
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaa 339  Q
    ||||||||||||||||||| ||||||||||||||||||  || ||||||||||||| || |||||||    
T  66 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgttaaa 132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 354
Target Start/End: Complemental strand, 20202 - 20129
Alignment:
Q  280 aattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||||||||||||| |||||||||||||  || ||||| ||||||| ||||||||||| |||||||||||||    
T  20202 aattacaacttctaaacataattcccaaattccca-aactataacctacaacctgttaaattcaattttcagaat 20129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 23332 - 23279
Alignment:
Q  78 caaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    |||||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  23332 caaattcgttaggaaacttaacctatgattattctacaacatgaacatcaattc 23279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 4605 - 4685
Alignment:
Q  268 attaaaacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaatttt 348  Q
    |||||| |||| |||||||||||||||||||||||| ||||||  || ||| ||||||||  ||||||||||| |||||||    
T  4605 attaaaccaactaattacaacttctaaacctaattctcaaattcccaaaaccacaacctaaaacctgttaaattcaatttt 4685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 31969 - 32036
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaa 128  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||| ||||    
T  31969 tttcatcaacccaaatcccaaatttgataggaaactcaacctatg-ttattctacagcctgaacttcaa 32036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 592 - 537
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  592 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 2492 - 2547
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  2492 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 2547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 3110 - 3165
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  3110 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 3165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 820 - 754
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaa 339  Q
    |||||| |||||||||||| ||||||||||||||||||  || ||||||||||||| || |||||||    
T  820 aacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgttaaa 754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 1093 - 1147
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaaccta 327  Q
    ||||||||||||||||||| ||||||||||||||||||  || ||||||||||||    
T  1093 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaaccta 1147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 4860 - 4964
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| |||| ||  |||||||||| |||||||| |||||||| ||||||||       ||| ||||||| ||||||||||||||||||||||||| |    
T  4860 tttcatcaaccctaattccaaatttgaaaggaaactcaacctatgtttattcta-------aacttcaattcttatgttaattcattggattacctactc 4952  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  4953 ttt-aacaatcaa 4964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 4860 - 4964
Alignment:
Q  60 tttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacac 159  Q
    ||||||| |||| ||  |||||||||| |||||||| |||||||| ||||||||       ||| ||||||| ||||||||||||||||||||||||| |    
T  4860 tttcatcaaccctaattccaaatttgaaaggaaactcaacctatgtttattcta-------aacttcaattcttatgttaattcattggattacctactc 4952  T
Q  160 tttcaacaatcaa 172  Q
    ||| |||||||||    
T  4953 ttt-aacaatcaa 4964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 19565 - 19455
Alignment:
Q  21 tctacgggaacagaccagtttccaaccaaaaatccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctg 120  Q
    ||||||||||||||||||||| ||  | |||| ||    ||||||| || || | |||||||||||||||||||| ||| |||| |||||||||| ||||    
T  19565 tctacgggaacagaccagttttcactccaaaagccccaatttcatcaactcatatcccaaatttgataggaaactcaacttatgtttattctacagcctg 19466  T
Q  121 aacatcaattc 131  Q
    ||| |||||||    
T  19465 aacttcaattc 19455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 12657 - 12603
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaaccta 327  Q
    ||||||||||||||||||| ||||||||||||||||||  || ||||||||||||    
T  12657 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaaccta 12603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 5311 - 5366
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||| ||||| ||||||||||||||||||  || |||||||||||||    
T  5311 aacaaccaattacgacttcaaaacctaattcccaaattcccataactacaacctac 5366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 347
Target Start/End: Complemental strand, 21917 - 21843
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattt 347  Q
    ||||||||||||||||||| ||||||||||||||||||  || || |||||||||| || || ||||| ||||||    
T  21917 aacaaccaattacaacttcaaaacctaattcccaaattcccataaatacaacctacaacatgctaaattcaattt 21843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 67043 - 67129
Alignment:
Q  269 ttaaaacaaccaattac-aacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||| ||||||||| | ||||||||||||| |||||||||||   | ||||||||||||| |  ||||||||||||||||||||||    
T  67043 ttaaaccaaccaatttccaacttctaaaccttattcccaaattcctaaaactacaacctacaatttgttaaatccaattttcagaat 67129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 31800 - 31869
Alignment:
Q  106 ttattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaatt 175  Q
    ||||||||||||| |||||||||||   || |||||||||||||||  |||||||||||| |||||||||    
T  31800 ttattctacaaccagaacatcaattttcattttaattcattggattttctacactttcaaaaatcaaatt 31869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 354
Target Start/End: Complemental strand, 5941 - 5861
Alignment:
Q  275 caaccaattacaacttctaaacctaattc-ccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    ||||||||| |||||||||| |||||||  ||||||| | | |||||||||| || |||||| ||||||||||||||||||    
T  5941 caaccaatttcaacttctaaccctaattttccaaattctgaaaactacaacccacaacctgtcaaatccaattttcagaat 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 4838 - 4783
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||| ||||||    
T  4838 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacgacctac 4783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 354
Target Start/End: Original strand, 7205 - 7285
Alignment:
Q  275 caaccaattacaacttctaaacctaa-ttcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||||||||||||| ||||| || |||||||  || ||||| ||||||| || ||| ||||||||||||||||||    
T  7205 caaccaattacaacttctaaccctaattttccaaattcccaaaactataacctacaacatgtcaaatccaattttcagaat 7285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 1133 - 1188
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||||||||||   | |||||||||||||    
T  1133 aacaaccaattacaacttcaaaacctaattcccaaattacaataactacaacctac 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 1568 - 1449
Alignment:
Q  80 aatttgataggaaacttaacctatgattattctacaacctgaacatcaattcatatgttaattcattggattacctacactttcaacaatcaaattgtaa 179  Q
    ||||||||||||||| | ||||| | ||| |||||||||| |||||||| |   |  |||||||||  |||||| ||||||||||| |||||||||| |     
T  1568 aatttgataggaaacattacctagggttactctacaacctaaacatcaactttcacattaattcatcagattacttacactttcaagaatcaaattgcag 1469  T
Q  180 ttcaaaaccctaacttcttt 199  Q
    || ||||| |||||| ||||    
T  1468 ttgaaaactctaactccttt 1449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 11398 - 11343
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||| |||||||||||||  || |||||||||||||    
T  11398 aacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctac 11343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 13516 - 13461
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||||||||| |||||| ||||||||||||||||||  || |||||||||||||    
T  13516 aacaaccaattataacttcaaaacctaattcccaaattcccaaaactacaacctac 13461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 34267 - 34322
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||||||||||||    
T  34267 aacaaccaattacaacttcaaaacctgattcccaaattcccataactacaacctac 34322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 58674 - 58729
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| ||||||||||| ||||||  || |||||||||||||    
T  58674 aacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctac 58729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 2083 - 2005
Alignment:
Q  47 caaaaatccaatttttcatccacccaaaccccaaatttgat-aggaaacttaacctatgattattctacaacctgaaca 124  Q
    ||||||||| | |||||||| ||| |||||  |||  |||| |||||||||||||||||||||||||||||| ||||||    
T  2083 caaaaatcccaattttcatcaacctaaacctaaaaactgattaggaaacttaacctatgattattctacaacatgaaca 2005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 42514 - 42568
Alignment:
Q  77 ccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||||||||||||||| |||||| | |||||||||| ||||||| |||||||    
T  42514 ccaaatttgataggaaactcaacctaggtttattctacagcctgaacttcaattc 42568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 4830 - 4753
Alignment:
Q  277 accaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||| ||||||||||||||||||| |||||||     |||| |||||||| || |||||||| |||||||||||||    
T  4830 accaatgacaacttctaaacctaatttccaaattccacaaacttcaacctacaacttgttaaattcaattttcagaat 4753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 11318 - 11355
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaatt 310  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  11318 aacaaccaattacaacttcaaaacctaattcccaaatt 11355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 5198 - 5235
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaatt 310  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  5198 aacaaccaattacaacttcaaaacgtaattcccaaatt 5235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 38659 - 38728
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  38659 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 38728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 95248 - 95317
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  95248 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 95317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 163175 - 163230
Alignment:
Q  76 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatcaattc 131  Q
    ||||||||||||| | ||| | ||||||  ||||||||||||||||||||||||||    
T  163175 cccaaatttgataaggaacatcacctattgttattctacaacctgaacatcaattc 163230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 158622 - 158691
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  158622 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 158691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 4176 - 4235
Alignment:
Q  296 cctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||| ||| ||||| ||| ||| || | |||||||||||||||||||||    
T  4176 cctaattcccaaattctcaaaactaaaacttacaacatattaaatccaattttcagaatc 4235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 143539 - 143594
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    ||||||||||||||||||| |||| |||||||||||||   | |||||||||||||    
T  143539 aacaaccaattacaacttcaaaacataattcccaaattaaaataactacaacctac 143594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 169123 - 169068
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 328  Q
    |||||| |||||||| ||| ||||||||||||||||||  || |||||||||||||    
T  169123 aacaactaattacaagttcaaaacctaattcccaaattcccataactacaacctac 169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 2103 - 2041
Alignment:
Q  137 ttaattcattggattacctacactttcaacaatcaaattgtaattcaaaaccctaacttcttt 199  Q
    ||||||||||||||||| ||||| ||||| ||||  |||| |||||||||  |||||||||||    
T  2103 ttaattcattggattacttacacattcaagaatcctattgcaattcaaaattctaacttcttt 2041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 19689 - 19726
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattcccaaatt 310  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  19689 aacaaccaattacaacttaaaaacctaattcccaaatt 19726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 21588 - 21657
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| |||||||| |||||| ||| || ||| ||||||| || |||||||||||||||||||||||    
T  21588 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatc 21657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 19119 - 19179
Alignment:
Q  296 cctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    ||||||||||||||| ||| || ||| ||||||| || ||||||||| |||||||||||||    
T  19119 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatctaattttcagaatc 19179  T

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Target: scaffold0146 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 22926 - 22995
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaatc 355  Q
    |||| ||| ||||||||||||||| ||| || ||| ||||||| || |||||||||||||||| ||||||    
T  22926 acttttaaccctaattcccaaattctcaaaaactataacctacaacatgttaaatccaatttttagaatc 22995  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 78992 - 79025
Alignment:
Q  273 aacaaccaattacaacttctaaacctaattccca 306  Q
    ||||||||||||||||||| ||||||||||||||    
T  78992 aacaaccaattacaacttcaaaacctaattccca 79025  T

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Target: scaffold0695 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 6782 - 6850
Alignment:
Q  287 acttctaaacctaattcccaaattttcagaa-ctacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||| ||| |||||||| |||||| ||| || ||| ||||||| || ||||||||||||||||||||||    
T  6782 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 6850  T

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Target: scaffold0589 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 4333 - 4393
Alignment:
Q  294 aacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||| |||||  ||| ||||||||||||| || ||||||||||| || |||||||    
T  4333 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaatccagttctcagaat 4393  T

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Target: scaffold0075 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 60843 - 60903
Alignment:
Q  294 aacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||| |||||  ||| ||||||||||||| || |||||||| ||||| |||||||    
T  60843 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaattcaattctcagaat 60903  T

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Target: scaffold0065 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 52648 - 52588
Alignment:
Q  294 aacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaat 354  Q
    |||||||||| |||||  ||| ||||||| ||||| || |||||||||||||| |||||||    
T  52648 aacctaattctcaaatcctcaaaactacatcctacaacatgttaaatccaattctcagaat 52588  T

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