View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8901_low_99 (Length: 321)

Name: NF8901_low_99
Description: NF8901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8901_low_99
NF8901_low_99
[»] chr3 (37 HSPs)
chr3 (1-307)||(6499876-6500179)
chr3 (1-307)||(9992806-9993111)
chr3 (1-307)||(16390437-16390742)
chr3 (1-165)||(13382165-13382329)
chr3 (1-165)||(13392759-13392923)
chr3 (1-168)||(4744895-4745062)
chr3 (1-168)||(5511851-5512018)
chr3 (1-168)||(5546517-5546684)
chr3 (1-168)||(24661072-24661239)
chr3 (5-165)||(23758440-23758600)
chr3 (1-168)||(5626873-5627040)
chr3 (1-168)||(5875158-5875325)
chr3 (1-168)||(12295716-12295883)
chr3 (1-168)||(16477436-16477603)
chr3 (1-168)||(24392968-24393135)
chr3 (1-168)||(41684831-41684998)
chr3 (1-193)||(8775839-8776028)
chr3 (1-193)||(18485172-18485361)
chr3 (1-193)||(38195906-38196095)
chr3 (1-193)||(39373236-39373425)
chr3 (1-193)||(28323713-28323902)
chr3 (1-163)||(37867664-37867826)
chr3 (1-163)||(37876182-37876344)
chr3 (1-161)||(6219550-6219710)
chr3 (5-165)||(12248345-12248505)
chr3 (1-162)||(19779600-19779761)
chr3 (1-159)||(20682629-20682787)
chr3 (1-164)||(29470680-29470843)
chr3 (1-159)||(14466815-14466973)
chr3 (79-193)||(10654248-10654359)
chr3 (1-159)||(13122889-13123047)
chr3 (5-83)||(10635936-10636014)
chr3 (235-307)||(38195800-38195872)
chr3 (235-307)||(28323936-28324009)
chr3 (235-307)||(39373129-39373202)
chr3 (235-307)||(12248565-12248636)
chr3 (277-307)||(37876015-37876045)
[»] chr7 (24 HSPs)
chr7 (1-193)||(1988702-1988891)
chr7 (1-168)||(8011647-8011814)
chr7 (5-193)||(466557-466742)
chr7 (1-168)||(24735909-24736076)
chr7 (5-165)||(2715201-2715361)
chr7 (1-181)||(21001968-21002148)
chr7 (1-168)||(9086413-9086580)
chr7 (1-168)||(26399656-26399823)
chr7 (1-168)||(40051664-40051831)
chr7 (1-163)||(5686723-5686885)
chr7 (1-163)||(9434427-9434589)
chr7 (1-168)||(11097196-11097364)
chr7 (1-168)||(26698689-26698856)
chr7 (1-193)||(11006351-11006540)
chr7 (1-247)||(19992976-19993220)
chr7 (1-193)||(42866992-42867181)
chr7 (1-163)||(6876803-6876965)
chr7 (1-161)||(22090372-22090532)
chr7 (1-159)||(4213219-4213377)
chr7 (1-159)||(17959635-17959793)
chr7 (1-157)||(8618587-8618743)
chr7 (1-159)||(168090-168248)
chr7 (1-160)||(15887206-15887365)
chr7 (235-307)||(11006243-11006317)
[»] chr6 (26 HSPs)
chr6 (1-165)||(12856097-12856261)
chr6 (1-165)||(26865940-26866104)
chr6 (1-168)||(3662489-3662656)
chr6 (1-168)||(12726329-12726496)
chr6 (1-168)||(17983630-17983797)
chr6 (1-168)||(25788873-25789040)
chr6 (1-168)||(26026564-26026731)
chr6 (1-168)||(27342872-27343039)
chr6 (1-168)||(27403612-27403779)
chr6 (1-222)||(27373874-27374095)
chr6 (1-222)||(27464227-27464448)
chr6 (1-181)||(9122025-9122205)
chr6 (1-168)||(16931539-16931706)
chr6 (1-163)||(25590360-25590522)
chr6 (1-159)||(34816667-34816825)
chr6 (1-157)||(32971370-32971526)
chr6 (75-193)||(27385538-27385653)
chr6 (75-193)||(27475951-27476066)
chr6 (75-193)||(4632012-4632127)
chr6 (75-193)||(32310650-32310765)
chr6 (72-163)||(7669375-7669466)
chr6 (1-160)||(12359298-12359457)
chr6 (1-103)||(27385646-27385748)
chr6 (1-103)||(27476059-27476161)
chr6 (1-103)||(4632120-4632222)
chr6 (1-103)||(32310555-32310657)
[»] chr2 (21 HSPs)
chr2 (1-165)||(40223475-40223639)
chr2 (1-168)||(11404357-11404524)
chr2 (1-168)||(43346538-43346705)
chr2 (1-193)||(35254150-35254339)
chr2 (1-193)||(35264759-35264948)
chr2 (5-165)||(9907076-9907236)
chr2 (1-168)||(10268121-10268288)
chr2 (1-168)||(10278698-10278865)
chr2 (1-193)||(27222537-27222726)
chr2 (5-165)||(9772247-9772407)
chr2 (1-163)||(29245393-29245555)
chr2 (1-163)||(43083835-43083997)
chr2 (19-165)||(34803301-34803447)
chr2 (1-161)||(24337276-24337436)
chr2 (1-158)||(4211085-4211242)
chr2 (1-159)||(22959215-22959373)
chr2 (235-307)||(27222431-27222503)
chr2 (235-307)||(35254043-35254116)
chr2 (235-307)||(35264652-35264725)
chr2 (1-161)||(21171310-21171470)
chr2 (1-161)||(28730756-28730916)
[»] chr8 (21 HSPs)
chr8 (1-168)||(36294106-36294273)
chr8 (1-168)||(209099-209266)
chr8 (1-168)||(242989-243156)
chr8 (1-168)||(722722-722889)
chr8 (1-168)||(796359-796526)
chr8 (1-168)||(3358151-3358318)
chr8 (1-168)||(9342311-9342478)
chr8 (1-168)||(15766093-15766260)
chr8 (1-168)||(15790230-15790397)
chr8 (1-168)||(29077887-29078054)
chr8 (1-168)||(32087215-32087382)
chr8 (1-193)||(13687510-13687699)
chr8 (1-193)||(36079089-36079278)
chr8 (1-163)||(26112468-26112630)
chr8 (1-163)||(19129938-19130100)
chr8 (1-159)||(6152292-6152450)
chr8 (75-193)||(44482281-44482396)
chr8 (1-160)||(19226134-19226293)
chr8 (1-160)||(30324174-30324333)
chr8 (1-103)||(44482389-44482491)
chr8 (235-307)||(13687733-13687806)
[»] chr5 (36 HSPs)
chr5 (1-168)||(15768374-15768541)
chr5 (1-307)||(31447518-31447823)
chr5 (1-168)||(37731055-37731222)
chr5 (1-168)||(6985332-6985499)
chr5 (1-168)||(14039631-14039798)
chr5 (1-168)||(14448129-14448296)
chr5 (1-168)||(14559161-14559328)
chr5 (1-168)||(17616653-17616820)
chr5 (1-168)||(17728510-17728677)
chr5 (1-168)||(22685037-22685204)
chr5 (1-168)||(23305880-23306047)
chr5 (1-168)||(23371543-23371710)
chr5 (1-168)||(23706390-23706557)
chr5 (1-168)||(27469595-27469762)
chr5 (1-168)||(30228549-30228716)
chr5 (1-168)||(31358127-31358294)
chr5 (1-168)||(36583602-36583769)
chr5 (1-168)||(42052402-42052569)
chr5 (1-167)||(27043313-27043479)
chr5 (1-168)||(9345574-9345741)
chr5 (1-168)||(24589157-24589324)
chr5 (1-168)||(24817944-24818111)
chr5 (1-168)||(39491990-39492157)
chr5 (5-165)||(15994389-15994549)
chr5 (1-193)||(35225096-35225285)
chr5 (1-163)||(5291675-5291837)
chr5 (1-163)||(27604554-27604716)
chr5 (5-165)||(31843003-31843163)
chr5 (1-161)||(40400001-40400161)
chr5 (1-162)||(39361282-39361443)
chr5 (1-159)||(22156086-22156244)
chr5 (18-164)||(1110295-1110441)
chr5 (1-164)||(20796655-20796818)
chr5 (75-193)||(36697303-36697418)
chr5 (1-103)||(36697208-36697310)
chr5 (1-161)||(23405405-23405565)
[»] chr4 (18 HSPs)
chr4 (1-168)||(55754728-55754895)
chr4 (1-168)||(10750068-10750235)
chr4 (1-168)||(10963837-10964004)
chr4 (5-165)||(451752-451912)
chr4 (5-165)||(30935995-30936155)
chr4 (1-168)||(36019508-36019675)
chr4 (1-193)||(24641466-24641655)
chr4 (5-165)||(21997592-21997752)
chr4 (1-185)||(18761981-18762162)
chr4 (1-193)||(27657799-27657988)
chr4 (1-163)||(24026938-24027100)
chr4 (1-161)||(17919294-17919454)
chr4 (3-163)||(40469494-40469654)
chr4 (1-163)||(19953855-19954017)
chr4 (1-159)||(16257112-16257270)
chr4 (235-307)||(18762203-18762275)
chr4 (235-307)||(27657692-27657765)
chr4 (235-307)||(24641359-24641432)
[»] chr1 (21 HSPs)
chr1 (1-168)||(38096204-38096371)
chr1 (1-168)||(51655387-51655554)
chr1 (1-168)||(7508418-7508585)
chr1 (1-168)||(36245943-36246110)
chr1 (5-165)||(12731631-12731791)
chr1 (5-165)||(12742224-12742384)
chr1 (1-193)||(35400055-35400244)
chr1 (1-193)||(35647580-35647769)
chr1 (1-193)||(5834323-5834512)
chr1 (1-168)||(47617449-47617616)
chr1 (1-193)||(3172719-3172908)
chr1 (1-163)||(4168401-4168563)
chr1 (1-163)||(19180085-19180247)
chr1 (1-161)||(5649269-5649429)
chr1 (1-161)||(21864824-21864984)
chr1 (1-164)||(153163-153326)
chr1 (1-159)||(12622689-12622847)
chr1 (235-307)||(3172611-3172685)
chr1 (235-307)||(35400278-35400351)
chr1 (235-307)||(35647803-35647876)
chr1 (3-98)||(7680466-7680561)
[»] scaffold0133 (1 HSPs)
scaffold0133 (1-168)||(32310-32477)
[»] scaffold0105 (2 HSPs)
scaffold0105 (1-193)||(46494-46683)
scaffold0105 (235-307)||(46717-46789)
[»] scaffold0906 (2 HSPs)
scaffold0906 (3-164)||(3438-3599)
scaffold0906 (235-307)||(3666-3738)
[»] scaffold1216 (1 HSPs)
scaffold1216 (1-163)||(267-429)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-164)||(52486-52649)
[»] scaffold0454 (2 HSPs)
scaffold0454 (75-193)||(2420-2535)
scaffold0454 (1-103)||(2528-2630)
[»] scaffold0398 (2 HSPs)
scaffold0398 (1-164)||(3253-3416)
scaffold0398 (1-164)||(11508-11671)
[»] scaffold0747 (1 HSPs)
scaffold0747 (1-64)||(3556-3619)
[»] scaffold0199 (1 HSPs)
scaffold0199 (75-164)||(23803-23892)
[»] scaffold1002 (2 HSPs)
scaffold1002 (1-103)||(2768-2870)
scaffold1002 (75-164)||(2863-2952)
[»] scaffold0251 (1 HSPs)
scaffold0251 (39-160)||(23758-23879)


Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 6499876 - 6500179
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6499876 ctttctatcaagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 6499975  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaattat 200  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6499976 tgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaacacttttagcttgtttttacttgtgttctaaattat 6500075  T
Q  201 cagtagctttgcctctgtatctctatttgattaatataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgt 300  Q
    |||||||||| ||| |||||||  | ||| | ||||| |||||||||||||||||||||||  || ||||||||||||||||||||||||| ||||||||    
T  6500076 cagtagcttttcctttgtatcttaacttg-tcaatat-aatattatcattgtttctgaaaa-atatgttctacagttttaactctgatgatgtttattgt 6500172  T
Q  301 ttttaat 307  Q
    |||||||    
T  6500173 ttttaat 6500179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 9992806 - 9993111
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  9992806 ctttctatcccgaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaagaagaatgagagaaaaggatgagctacttaagaagaagga 9992905  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaa-tta 199  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||  |||||||| |||    
T  9992906 tgatcatatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactcttagcttgtttttactttggttctaaattta 9993005  T
Q  200 tcagtagctttgcctctgtatctctatttgattaatataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattg 299  Q
    |||||||||||||||||||||||  ||||| | |||||||||||||||||| ||||||||||  || ||||||||||||||||||| |||||||||||||    
T  9993006 tcagtagctttgcctctgtatcttaatttg-tcaatataaatattatcattatttctgaaaa-atatgttctacagttttaactctaatgatatttattg 9993103  T
Q  300 tttttaat 307  Q
    ||||||||    
T  9993104 tttttaat 9993111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 16390437 - 16390742
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16390437 ctttctatccagaagaagagtacatcacaagggcagccagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 16390536  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaattat 200  Q
    ||| || || ||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||  | || ||||||||| | || || ||||| || |    
T  16390537 tgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccgacattctttgcttgttttaatttttgctctaagttgt 16390636  T
Q  201 cagtagctttgcctctgtatctctatttgattaatataaatattatcattgtttctgaaaatttaagttctac-agttttaactctgatgatatttattg 299  Q
     ||||||||||||| ||||||| ||  | ||  |||||||| |||||||||||||| |||  ||| ||| ||| || |||||||||||| ||||||  ||    
T  16390637 tagtagctttgcctttgtatct-taacttatctatataaatgttatcattgtttct-aaatcttatgttttacaagctttaactctgataatatttgctg 16390734  T
Q  300 tttttaat 307  Q
    ||||||||    
T  16390735 tttttaat 16390742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 13382165 - 13382329
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  13382165 ctttctatccagaggaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 13382264  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13382265 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 13382329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 13392759 - 13392923
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  13392759 ctttctatccagaggaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 13392858  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13392859 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 13392923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 4745062 - 4744895
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  4745062 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 4744963  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4744962 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 4744895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 5512018 - 5511851
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  5512018 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 5511919  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5511918 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 5511851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 5546517 - 5546684
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  5546517 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 5546616  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5546617 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 5546684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 24661239 - 24661072
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  24661239 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 24661140  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661139 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 24661072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 23758600 - 23758440
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | || |||||||||||||||||||||||||||||||||    
T  23758600 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaggatgat 23758501  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23758500 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 23758440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 5626873 - 5627040
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  5626873 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaagga 5626972  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5626973 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 5627040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 5875158 - 5875325
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  |||||  ||||||||| |||||||||||||||||||||||||||||    
T  5875158 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacaaagaatgagggaaaaggatgagctacttcagaagaagga 5875257  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5875258 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 5875325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 12295716 - 12295883
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  12295716 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaagga 12295815  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12295816 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 12295883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 16477603 - 16477436
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  16477603 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaagga 16477504  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16477503 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 16477436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 24392968 - 24393135
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||| ||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  24392968 ctttctattcagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 24393067  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24393068 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 24393135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 41684998 - 41684831
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  41684998 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaagga 41684899  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41684898 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 41684831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 8776028 - 8775839
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  8776028 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 8775929  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  8775928 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 8775839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 18485361 - 18485172
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  18485361 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 18485262  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  18485261 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 18485172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 38196095 - 38195906
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  38196095 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 38195996  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  38195995 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 38195906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 39373425 - 39373236
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  39373425 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 39373326  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  39373325 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 39373236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 28323713 - 28323902
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| ||| |||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  28323713 ctttctatcctgaagaagagtatatctcaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 28323812  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  28323813 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 28323902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37867826 - 37867664
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  37867826 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaagga 37867727  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || |||||||| || ||| || |||| |||||||||||||||||||||||||||||    
T  37867726 tgagcaaattaagtatcttttggaatagatgtacaagcaagcccaaccttagttgcacaccca 37867664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37876344 - 37876182
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  37876344 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaagga 37876245  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || |||||||| || ||| || |||| |||||||||||||||||||||||||||||    
T  37876244 tgagcaaattaagtatcttttggaatagatgtacaagcaagcccaaccttagttgcacaccca 37876182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 6219550 - 6219710
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| || |||||||    
T  6219550 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttaagcagaagga 6219649  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 161  Q
    ||| || || ||||||||||| |||||| |||| |||||||||||||||||||||||||||    
T  6219650 tgaacaaattaagtatctcttggaacagatgtacaagcaagcccaaccttagttgcacacc 6219710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 12248345 - 12248505
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||| | | | || |||||||||||||||||||||||||||||||||    
T  12248345 ctatccagaagaagaatacatcacaagggctgctagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaggatgat 12248444  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12248445 cagatcaagcatctcttagaacagttgtttaagcaagcccaaccttagttgcacacccaac 12248505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 19779761 - 19779600
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  19779761 ctttctatccagaagaagagtacatcataagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttaagaagaagga 19779662  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccc 162  Q
    ||| || || |||||||| || |||||| |||| ||||||||||||||||||||||||||||    
T  19779661 tgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccc 19779600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 20682629 - 20682787
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||| |||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||||| |||||||||||||||||  ||||||||||    
T  20682629 ctttctatacagaagaagagtacatcacaagggcatcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctactcaagaagaagga 20682728  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 159  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  20682729 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 20682787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 29470680 - 29470843
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||| ||| ||||  ||||| |||| ||||||||||||||| | ||||| ||| |||||| ||||||||| | |||||||||||||||    
T  29470680 ctttctatccagaagatgaggacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaagaagga 29470779  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 164  Q
    ||| || || |||||||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  29470780 tgagcaaattaagtatctattggaacagttgtataagcaagccaaaccttagttgcacacccaa 29470843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 14466973 - 14466815
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||   ||||||||| |||| |||||||||||||||||  | ||||||||    
T  14466973 ctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaggatgagctactcaaaaagaagga 14466874  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 159  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  14466873 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 14466815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 79 - 193
Target Start/End: Original strand, 10654248 - 10654359
Alignment:
Q  79 atgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgt 178  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||    
T  10654248 atgagctacttcagaagaaagatgatcaaatcaagtatctcttagaatagttgtataagcaagcccaaccttagttgcacacccaactc---tagcttgt 10654344  T
Q  179 ttttacttgtgttct 193  Q
    |||||||| ||||||    
T  10654345 ttttacttttgttct 10654359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 13123047 - 13122889
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||| |||||   ||||||||| |||| |||||||||||||||||  | ||||||||    
T  13123047 ctttctatccagaagaagagtacatctcaagggcaacaagaattcattctgggtacaaaagaagattgagggaaaaggatgagctactcaaaaagaagga 13122948  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 159  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  13122947 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 13122889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 10635936 - 10636014
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgag 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||    
T  10635936 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgag 10636014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 38195872 - 38195800
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||   |||||||||| ||||||||||||| |||||||    
T  38195872 tataaatattatcattgtttctgaaatattatgttctatttttttaactctaatgatatttattgattttaat 38195800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 28323936 - 28324009
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  28323936 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 28324009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 39373202 - 39373129
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  39373202 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 39373129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 12248565 - 12248636
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttttaat 307  Q
    |||||||||||||||||||| | |||   || |||||| | |||||| |||||||||||||||||||||||||    
T  12248565 tataaatattatcattgttttt-aaatcatatgttctatacttttaattctgatgatatttattgtttttaat 12248636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 307
Target Start/End: Complemental strand, 37876045 - 37876015
Alignment:
Q  277 tttaactctgatgatatttattgtttttaat 307  Q
    |||||||||||||||||||||||||||||||    
T  37876045 tttaactctgatgatatttattgtttttaat 37876015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 7e-80; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 1988891 - 1988702
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  1988891 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctacttcagaagaagga 1988792  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  1988791 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 1988702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 8011647 - 8011814
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  8011647 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctacttcagaagaagga 8011746  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8011747 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 8011814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 5 - 193
Target Start/End: Original strand, 466557 - 466742
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | || |||||||||||||||||||||||||| ||||||    
T  466557 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 466656  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  466657 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 466742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 24736076 - 24735909
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  24736076 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 24735977  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24735976 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 24735909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 2715201 - 2715361
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  2715201 ctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctacttcaaaagaaggatgat 2715300  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2715301 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 2715361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 21001968 - 21002148
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  21001968 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaagga 21002067  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttt 181  Q
    ||| || || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| | | || |||||||||    
T  21002068 tgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccaattttctttgcttgtttt 21002148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 9086580 - 9086413
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  9086580 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaagga 9086481  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9086480 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 9086413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 26399656 - 26399823
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  26399656 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 26399755  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26399756 tgatcagatcaagtatctcttagaactgttgtataagcaagcccaaccttagttgcacacccaactct 26399823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 40051664 - 40051831
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||||||| |||||| |||||||||||||||||||||||||||||    
T  40051664 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaataatgagggaaaaggatgagctacttcagaagaagga 40051763  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40051764 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 40051831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5686885 - 5686723
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  5686885 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaagga 5686786  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  5686785 tgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacaccca 5686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 9434589 - 9434427
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  9434589 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaagga 9434490  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  9434489 tgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacaccca 9434427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 11097364 - 11097196
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaag-ggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagg 99  Q
    |||||||||||||||||||||||||||| || |||||| |||||||| |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  11097364 ctttctatccagaagaagagtacatcactagtggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagg 11097265  T
Q  100 atgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11097264 atgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 11097196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 26698689 - 26698856
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  26698689 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 26698788  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  26698789 tgatcagatcaagtatctcttagaatagttgtataagcaagcccaaccttagttgcacatccaactct 26698856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 11006540 - 11006351
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  11006540 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 11006441  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  11006440 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 11006351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 19992976 - 19993220
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||| ||||| ||||||||||    
T  19992976 ctttctatccagaagaagagtacatcacaagggctgctagaattcatgctggattcaaaagaagaatgagagaaaaggatgagttacttaagaagaagga 19993075  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaattat 200  Q
    ||| || || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| || || ||||| ||| | || |||||||| || |    
T  19993076 tgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccaacactctttgcttg-tttaatttttgttctaagttgt 19993174  T
Q  201 cagtagctttgcctctgtatctctatttgattaatataaatattatc 247  Q
     ||||||||||||| ||||||| ||| | ||  ||||||||||||||    
T  19993175 tagtagctttgcctttgtatct-tatcttatctatataaatattatc 19993220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 42867181 - 42866992
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  42867181 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 42867082  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  42867081 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 42866992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 6876803 - 6876965
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  6876803 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttaagaagaagga 6876902  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  6876903 tgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 6876965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 22090532 - 22090372
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||  ||||||||||||||| |||||||||||||||||  | ||||||||    
T  22090532 ctttctatccagaagaagagtacatcacaagggcaaccagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctactcaaaaagaagga 22090433  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 161  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||||    
T  22090432 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcacacc 22090372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 4213377 - 4213219
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||||  ||||||||||||||| ||||| |||||||||||  ||||||||||    
T  4213377 ctttctatccagaagaagagtacattacaagggcatcaagaattcatgctgggtataaaagaagaatgagggaaaatgatgagctactcaagaagaagga 4213278  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 159  Q
    |||  | ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  4213277 tgagaaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 4213219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 17959635 - 17959793
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||   |||||||||||||| |||||||||||||||||  | ||||||||    
T  17959635 ctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagaatgagggaaaaggatgagctactcaaaaagaagga 17959734  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 159  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  17959735 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 17959793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 8618743 - 8618587
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||   |||| ||||||||| |||||||||||||||||  | ||||||||    
T  8618743 ctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaataagaatgagggaaaaggatgagctactcaaaaagaagga 8618644  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgca 157  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||    
T  8618643 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgca 8618587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 168248 - 168090
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||   ||||||||| |||| ||||| |||||||||||  | ||||||||    
T  168248 ctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctactcaaaaagaagga 168149  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 159  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  168148 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 168090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 15887206 - 15887365
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||| ||||||||||| || ||||   |||||||||  |||||||| |||||||| ||||||||| |||||| | || | || | |||||||||||| ||    
T  15887206 ctttttatccagaagatgattacacttcaagggctgatagaattcaagctgggctgaaaagaagactgagagcacagaaagaacaacttcagaagaatga 15887305  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacac 160  Q
    ||| ||| | || ||||| || |||||| ||| ||||| |||| ||||||||||||||||    
T  15887306 tgagcaggttaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 15887365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 11006317 - 11006243
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttcta--cagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||     |||||||||| ||||||||||||| |||||||    
T  11006317 tataaatattatcattgtttctgaaatattatgttctatttttttttaactctaatgatatttattgattttaat 11006243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 3e-76; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 12856261 - 12856097
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  12856261 ctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 12856162  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12856161 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 12856097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 26866104 - 26865940
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  26866104 ctttctatccagaagaagagtacatcacaagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 26866005  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26866004 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 26865940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 3662656 - 3662489
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  3662656 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 3662557  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3662556 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 3662489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 12726329 - 12726496
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  12726329 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 12726428  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12726429 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 12726496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 17983630 - 17983797
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  17983630 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 17983729  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17983730 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 17983797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 25789040 - 25788873
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  25789040 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 25788941  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25788940 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 25788873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 26026731 - 26026564
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  26026731 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 26026632  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26026631 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 26026564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 27343039 - 27342872
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  27343039 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 27342940  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27342939 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 27342872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 27403779 - 27403612
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  27403779 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 27403680  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27403679 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 27403612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 27374095 - 27373874
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  27374095 ctttctatctagaagaagagtatatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttcagaagaagga 27373996  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaattat 200  Q
    |||||| || ||||| || || |||||| |||||||||||||||||||||||||||||||||||| || || ||||||||| | || |||||||| || |    
T  27373995 tgatcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaacactctttgcttgttttaatttttgttctaagttgt 27373896  T
Q  201 cagtagctttgcctctgtatct 222  Q
     ||||| ||||||| |||||||    
T  27373895 tagtagttttgcctttgtatct 27373874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 27464448 - 27464227
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  27464448 ctttctatctagaagaagagtatatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttcagaagaagga 27464349  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaattat 200  Q
    |||||| || ||||| || || |||||| |||||||||||||||||||||||||||||||||||| || || ||||||||| | || |||||||| || |    
T  27464348 tgatcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaacactctttgcttgttttaatttttgttctaagttgt 27464249  T
Q  201 cagtagctttgcctctgtatct 222  Q
     ||||| ||||||| |||||||    
T  27464248 tagtagttttgcctttgtatct 27464227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 9122025 - 9122205
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  9122025 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaagga 9122124  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttt 181  Q
    ||| || || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| | | || |||||||||    
T  9122125 tgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccaattttctttgcttgtttt 9122205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 16931706 - 16931539
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  16931706 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaagga 16931607  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16931606 tgatcagatcaagtatctcttagaacagtngtataagcaagcccaaccttagttgcacacccaactct 16931539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 25590522 - 25590360
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| |||||||| || ||| ||||||||||    
T  25590522 ctttctatccagaagaagagtacatcacaagggctgcaagaatacatgctgggtttaaaagaaggatgagagagaaggatgaacttcttaagaagaagga 25590423  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  25590422 tgagcaaattaagtacctcttagaacagatgtataagcaagcccaaccttagttgcacaccca 25590360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 34816667 - 34816825
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||   ||||||||| |||| ||||| |||||||||||  | ||||||||    
T  34816667 ctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctactcaaaaagaagga 34816766  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 159  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  34816767 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 34816825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 32971370 - 32971526
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||   ||||||||| |||| ||||| |||||||||||  | ||||||||    
T  32971370 ctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaatgatgagctactcaaaaagaagga 32971469  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgca 157  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||    
T  32971470 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgca 32971526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 27385653 - 27385538
Alignment:
Q  75 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 174  Q
    ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | |||||||||||||||||||||||||||||||||   ||||    
T  27385653 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc---tagc 27385557  T
Q  175 ttgtttttacttgtgttct 193  Q
    |||||||||||| ||||||    
T  27385556 ttgtttttacttttgttct 27385538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 27476066 - 27475951
Alignment:
Q  75 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 174  Q
    ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | |||||||||||||||||||||||||||||||||   ||||    
T  27476066 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc---tagc 27475970  T
Q  175 ttgtttttacttgtgttct 193  Q
    |||||||||||| ||||||    
T  27475969 ttgtttttacttttgttct 27475951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 4632127 - 4632012
Alignment:
Q  75 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 174  Q
    ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | |||||||||||||||||||||||||||||||||   ||||    
T  4632127 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc---tagc 4632031  T
Q  175 ttgtttttacttgtgttct 193  Q
    ||||| |||||| ||||||    
T  4632030 ttgttcttacttttgttct 4632012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 32310650 - 32310765
Alignment:
Q  75 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 174  Q
    ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | |||||||||||||||||||||||||||||||||   ||||    
T  32310650 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc---tagc 32310746  T
Q  175 ttgtttttacttgtgttct 193  Q
    ||||| |||||| ||||||    
T  32310747 ttgttcttacttttgttct 32310765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 7669375 - 7669466
Alignment:
Q  72 gaaaaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    |||||||||||||||||  ||||||||||||| || ||||||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  7669375 gaaaaggatgagctactcaagaagaaggatgagcaaatcaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 7669466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 12359457 - 12359298
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||| || ||||   |||||||||  |||||||| || ||||| ||||| ||| |||||| |||| ||||   |||||||||||||||    
T  12359457 ctttctatccagaagatgattacacttcaagggctgatagaattcaagcagggctgaaaagcagattgagagcaaagaatgaagaacttcagaagaagga 12359358  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacac 160  Q
    ||||||||| || ||||| || |||||| ||| ||||| |||| ||||||||||||||||    
T  12359357 tgatcagattaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 12359298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 27385748 - 27385646
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||| | ||| ||||||||||| |||||||||||||||||||||| ||| || |   | ||||| ||||| || |||||||||||||||||    
T  27385748 ctttctatccagaggcagaatacatcacaagagctgcaagaattcatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaagga 27385649  T
Q  101 tga 103  Q
    |||    
T  27385648 tga 27385646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 27476161 - 27476059
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||| | ||| ||||||||||| |||||||||||||||||||||| ||| || |   | ||||| ||||| || |||||||||||||||||    
T  27476161 ctttctatccagaggcagaatacatcacaagagctgcaagaattcatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaagga 27476062  T
Q  101 tga 103  Q
    |||    
T  27476061 tga 27476059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4632222 - 4632120
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||| | ||| ||||||||||| |||||||||||| ||||||||| ||| || |   | ||||| ||||| || |||||||||||||||||    
T  4632222 ctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaagga 4632123  T
Q  101 tga 103  Q
    |||    
T  4632122 tga 4632120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32310555 - 32310657
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||| | ||| ||||||||||| |||||||||||| ||||||||| ||| || |   | ||||| ||||| || |||||||||||||||||    
T  32310555 ctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaagga 32310654  T
Q  101 tga 103  Q
    |||    
T  32310655 tga 32310657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 40223639 - 40223475
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  40223639 ctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 40223540  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40223539 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 40223475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 11404357 - 11404524
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  11404357 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 11404456  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11404457 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 11404524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 43346705 - 43346538
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  43346705 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 43346606  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43346605 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 43346538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 35254339 - 35254150
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  35254339 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 35254240  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  35254239 tgaacagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 35254150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 35264948 - 35264759
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  35264948 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 35264849  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  35264848 tgaacagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 35264759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 9907076 - 9907236
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | || |||||||||||||||||||||||||||||||||    
T  9907076 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaggatgat 9907175  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9907176 cagatcaagtatctcttagaacagttgtataagtaagcccaaccttagttgcacacccaac 9907236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 10268288 - 10268121
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| |||||||||| ||||||||||||||||||||||| |||||    
T  10268288 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaaaaagga 10268189  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10268188 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 10268121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 10278865 - 10278698
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| |||||||||| ||||||||||||||||||||||| |||||    
T  10278865 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaaaaagga 10278766  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10278765 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 10278698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 27222726 - 27222537
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  27222726 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 27222627  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  27222626 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 27222537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 9772247 - 9772407
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| | | | || |||||||||||||||||||||||||| ||||||    
T  9772247 ctatccagaagaagagtacatcacaagagctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 9772346  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9772347 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 9772407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 29245555 - 29245393
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  29245555 ctttctatccagaagaagagtacattacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaagga 29245456  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  29245455 tgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 29245393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43083997 - 43083835
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  43083997 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaagga 43083898  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  43083897 tgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 43083835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 34803301 - 34803447
Alignment:
Q  19 agtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgatcagatcaagtatct 118  Q
    ||||||||||||||| ||| |||||||| ||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  34803301 agtacatcacaagggttgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgaactacttcagaagaaggatgatcagatcaagtatct 34803400  T
Q  119 cttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  34803401 cttagaacagttgtataagcaagcccaaccttagttgcacacccaac 34803447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 24337276 - 24337436
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||    
T  24337276 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctactcaagaagaagga 24337375  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 161  Q
    ||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||    
T  24337376 tgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 24337436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 4211242 - 4211085
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||    ||||||||||||||||||||||||||||||||  | ||||||||    
T  4211242 ctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctggatacaaaagaagaatgagagaaaaggatgagctactcaaaaagaagga 4211143  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcac 158  Q
    ||| || ||||||||||| || |||||| |||| |||||| |||||||||||||||||    
T  4211142 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcac 4211085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 22959215 - 22959373
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||   ||||||||| |||| ||||| |||||||||||  | ||||||||    
T  22959215 ctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctactcaaaaagaagga 22959314  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 159  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  22959315 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 22959373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 27222503 - 27222431
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||   |||||||||| ||||||||||||| |||||||    
T  27222503 tataaatattatcattgtttctgaaatattatgttctatttttttaactctaatgatatttattgattttaat 27222431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 35254116 - 35254043
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  35254116 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 35254043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 35264725 - 35264652
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  35264725 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 35264652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 21171310 - 21171470
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||  || |||||| |||||||||  |||||||| |  ||||| | ||||||| ||||||  ||||||||   |||||||||| ||      
T  21171310 ctttctatccagaagctgattacatctcaagggctgatagaattcaagaagggctgagaagaagactgagagccaaggatgaagaacttcagaagcagtc 21171409  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 161  Q
    ||| ||||| || ||  | || |||||  ||| ||||| | || |||||||||||||||||    
T  21171410 tgagcagattaaatacttattggaacaagtgtctaagctatccaaaccttagttgcacacc 21171470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 28730756 - 28730916
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||  || |||||| |||||||||  |||||||| |  ||||| | ||||||| ||||||  ||||||||   |||||||||| ||      
T  28730756 ctttctatccagaagctgattacatctcaagggctgatagaattcaagaagggctgagaagaagactgagagccaaggatgaagaacttcagaagtagtc 28730855  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 161  Q
    ||| ||||| || ||  | || |||||  ||| ||||| | || |||||||||||||||||    
T  28730856 tgagcagattaaatacttattggaacaagtgtctaagctatccaaaccttagttgcacacc 28730916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 1e-75; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 36294273 - 36294106
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| ||||||||||||||||||||||||||||||||||||||||    
T  36294273 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagagaaaaggatgagctacttcagaagaagga 36294174  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36294173 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 36294106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 209099 - 209266
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  209099 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 209198  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  209199 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 209266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 243156 - 242989
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  243156 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 243057  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  243056 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 242989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 722722 - 722889
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  722722 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 722821  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  722822 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 722889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 796526 - 796359
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  796526 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 796427  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  796426 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 796359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 3358151 - 3358318
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  3358151 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 3358250  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3358251 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 3358318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 9342478 - 9342311
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  9342478 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 9342379  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9342378 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 9342311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 15766093 - 15766260
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||| |||||| ||||||||||| ||||||||||    
T  15766093 ctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaagaatgagctactttagaagaagga 15766192  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15766193 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 15766260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 15790230 - 15790397
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||| |||||||||||||||||| ||||||||||    
T  15790230 ctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctactttagaagaagga 15790329  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15790330 tgatcggatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 15790397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 29078054 - 29077887
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  29078054 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 29077955  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29077954 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 29077887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 32087215 - 32087382
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  32087215 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 32087314  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32087315 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 32087382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 13687510 - 13687699
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  13687510 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 13687609  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  13687610 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 13687699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 36079278 - 36079089
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  36079278 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 36079179  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  36079178 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 36079089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 26112630 - 26112468
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| || |||||||    
T  26112630 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttaagcagaagga 26112531  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  26112530 tgaacaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 26112468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 19130100 - 19129938
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  19130100 ctttctatccagaagaagagtacattacaagggctgcaagaattcatgttgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaagga 19130001  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    | | || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  19130000 tcagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 19129938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 6152450 - 6152292
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||| |||||||||||||||| |||||||  |||||||||||||||||   ||||||||| |||| |||||||||||||||||  | |||||| |    
T  6152450 ctttctatcgagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaggatgagctactcaaaaagaagaa 6152351  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 159  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  6152350 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 6152292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 44482396 - 44482281
Alignment:
Q  75 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 174  Q
    ||||||||||||||||||||||||||||| ||||| |    ||||||||||||| || | |||||||||||||||||||||||||||||||||   ||||    
T  44482396 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagctgaagaagcaagcccaaccttagttgcacacccaactc---tagc 44482300  T
Q  175 ttgtttttacttgtgttct 193  Q
    ||||| |||||| ||||||    
T  44482299 ttgttcttacttttgttct 44482281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 19226293 - 19226134
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||| || ||||   |||||||||  |||||||| |||||||| ||||||||| |||||| | || | || | |||||||||||||||    
T  19226293 ctttctatccagaagatgattacacttcaagggctgatagaattcaagctgggctgaaaagaagactgagagcacagaaagaacaacttcagaagaagga 19226194  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacac 160  Q
    ||| ||||| || ||||| || |||||| ||| ||||| |||| ||||||||||||||||    
T  19226193 tgagcagattaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 19226134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 30324174 - 30324333
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||| ||||||||||| || ||||   |||||||||  |||||||| |||||||| ||||||||| |||||| | ||  ||| | |||||||||||||||    
T  30324174 ctttttatccagaagatgattacacttcaagggctgatagaattcaagctgggctgaaaagaagagtgagagcacagactgaacaacttcagaagaagga 30324273  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacac 160  Q
    ||| ||||| || ||||| || |||||| ||| ||||| |||| ||||||||||||||||    
T  30324274 tgagcagattaaatatcttttggaacagatgtctaagctagccaaaccttagttgcacac 30324333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 44482491 - 44482389
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||| | ||| ||||||||||| |||||||||||| ||||||||| ||| || |   | ||||| ||||| || |||||||||||||||||    
T  44482491 ctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaagga 44482392  T
Q  101 tga 103  Q
    |||    
T  44482391 tga 44482389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 13687733 - 13687806
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  13687733 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 13687806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 15768374 - 15768541
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  15768374 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctacttcagaagaagga 15768473  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15768474 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 15768541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 31447518 - 31447823
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31447518 ctttctatccagaagaagagtacattacaagggctgctagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 31447617  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttctaaattat 200  Q
    ||| || || |||||| | || |||||| ||||||||||||||||||||||||||||||||||||  | || ||||||||| | || |||||||| || |    
T  31447618 tgagcaaattaagtatattttggaacagatgtataagcaagcccaaccttagttgcacacccaacattctttgcttgttttaatttttgttctaagttgt 31447717  T
Q  201 cagtagctttgcctctgtatctctatttgattaatataaatattatcattgtttctgaaaatttaagttctac-agttttaactctgatgatatttattg 299  Q
     ||||||||||||| ||||||| ||  | ||  |||||||| |||||||||| |||| ||  ||| ||| ||| || |||||||||||| |||||| |||    
T  31447718 tagtagctttgcctttgtatct-taacttatctatataaatgttatcattgtctctg-aatcttatgttttacaagctttaactctgataatatttgttg 31447815  T
Q  300 tttttaat 307  Q
    ||||||||    
T  31447816 tttttaat 31447823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 37731222 - 37731055
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  37731222 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctacttcagaagaagga 37731123  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37731122 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 37731055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 6985332 - 6985499
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  6985332 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 6985431  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6985432 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 6985499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 14039631 - 14039798
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  14039631 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 14039730  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14039731 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 14039798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 14448296 - 14448129
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  14448296 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 14448197  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14448196 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 14448129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 14559328 - 14559161
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  14559328 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 14559229  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14559228 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 14559161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 17616653 - 17616820
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||    
T  17616653 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 17616752  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17616753 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 17616820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 17728510 - 17728677
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||    
T  17728510 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 17728609  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17728610 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 17728677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 22685037 - 22685204
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  22685037 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 22685136  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22685137 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 22685204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 23305880 - 23306047
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  23305880 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 23305979  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23305980 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 23306047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 23371543 - 23371710
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  23371543 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 23371642  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23371643 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 23371710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 23706390 - 23706557
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  23706390 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 23706489  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23706490 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 23706557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 27469595 - 27469762
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  27469595 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 27469694  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27469695 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 27469762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 30228716 - 30228549
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  30228716 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 30228617  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30228616 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 30228549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 31358127 - 31358294
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||    
T  31358127 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 31358226  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31358227 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 31358294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 36583769 - 36583602
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  36583769 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 36583670  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36583669 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 36583602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 42052402 - 42052569
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  42052402 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 42052501  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42052502 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 42052569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 27043479 - 27043313
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  27043479 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 27043380  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27043379 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 27043313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 9345574 - 9345741
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||| ||||||||||    
T  9345574 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctactttagaagaagga 9345673  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9345674 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 9345741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 24589324 - 24589157
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||||||||||||||  ||||||||||||||||||||||||||||    
T  24589324 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgaggtaaaaggatgagctacttcagaagaagga 24589225  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24589224 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 24589157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 24818111 - 24817944
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  24818111 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaagga 24818012  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24818011 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 24817944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 39492157 - 39491990
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| ||||||||||  ||||||||||||||||||||||||||||    
T  39492157 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgaggaaaaaggatgagctacttcagaagaagga 39492058  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39492057 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 39491990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 15994549 - 15994389
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | || ||||| |||||||||||||||||||| ||||||    
T  15994549 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaatgatgagctacttcagaagaaagatgat 15994450  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15994449 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 15994389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 35225096 - 35225285
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  35225096 ctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 35225195  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  35225196 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 35225285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5291837 - 5291675
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  5291837 ctttctatccagaagaagagtacattataagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaagga 5291738  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || ||||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  5291737 tgagcaaattaagtatctcttggaatagatgtataagcaagcccaaccttagttgcacaccca 5291675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 27604716 - 27604554
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  27604716 ctttctatccagaagaagagtacatcacaaggactgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaagga 27604617  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  27604616 tgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 27604554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 31843003 - 31843163
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| | | | || |||||||||||||||||||||||||| ||||||    
T  31843003 ctatccagaagaagagtacatcacaagagctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 31843102  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  31843103 cagatcaagtatttcttagaatagttgtataagcaagcccaaccttagttgcacacccaac 31843163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 40400001 - 40400161
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  40400001 ctttctatccagaagaagaatacattacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttaagaagaagga 40400100  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 161  Q
    ||| || || |||||||| || |||||| |||| |||||||||||||| ||||||||||||    
T  40400101 tgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccctagttgcacacc 40400161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 39361282 - 39361443
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||  ||||||| ||    
T  39361282 ctttctacccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctactcaagaagaatga 39361381  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccc 162  Q
    ||| || || |||||||| || |||||| |||| ||||||||||||||||||||||||||||    
T  39361382 tgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccc 39361443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 22156086 - 22156244
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||   ||||||||| |||| ||||| |||||||||||  | ||||||||    
T  22156086 ctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctactcaaaaagaagga 22156185  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 159  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  22156186 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 22156244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 1110441 - 1110295
Alignment:
Q  18 gagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgatcagatcaagtatc 117  Q
    ||||||||  ||||| |||| ||||||||||||||| | ||||| ||| |||||| ||||||||| | |||||||||||||||||| || || |||||||    
T  1110441 gagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaagaaggatgagcaaattaagtatc 1110342  T
Q  118 tcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 164  Q
    | || ||||||||||||||||||||| ||||||||||||||||||||    
T  1110341 tattggaacagttgtataagcaagccaaaccttagttgcacacccaa 1110295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 20796655 - 20796818
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||| ||||||||  ||||  |||  |||||||| || ||| | ||||||||| |||||| ||||||||| | |||||||||||||||    
T  20796655 ctttctatccagaagatgagtacatttcaagaactgttagaattcaagccgggttgaaaagaagactgagagcaaaggatgaacaacttcagaagaagga 20796754  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 164  Q
    ||| ||||| || ||||| || |||||| ||||||||| |||| ||||||||||||||||||||    
T  20796755 tgagcagattaaatatcttttggaacagatgtataagctagccaaaccttagttgcacacccaa 20796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 36697303 - 36697418
Alignment:
Q  75 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 174  Q
    ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | |||||||||||||||||||||||||||||||||   ||||    
T  36697303 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc---tagc 36697399  T
Q  175 ttgtttttacttgtgttct 193  Q
    ||||| |||||| ||||||    
T  36697400 ttgttcttacttttgttct 36697418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36697208 - 36697310
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||| | ||| ||||||||||| |||||||||||| ||||||||| ||| || |   | ||||| ||||| || |||||||||||||||||    
T  36697208 ctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaagga 36697307  T
Q  101 tga 103  Q
    |||    
T  36697308 tga 36697310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 23405405 - 23405565
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||  || |||||| |||||||||  |||||||| |  ||||| | ||||||| ||||||  ||||||||   |||||||||| ||      
T  23405405 ctttctatccagaagctgattacatctcaagggctgatagaattcaagaagggctgagaagaagactgagagccaaggatgaagaacttcagaagcagtc 23405504  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 161  Q
    ||| ||||| || ||  | || |||||  ||| ||||| | || |||||||||||||||||    
T  23405505 tgagcagattaaatacttattggaacaagtgtctaagctatccaaaccttagttgcacacc 23405565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 55754728 - 55754895
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  55754728 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctacttcagaagaagga 55754827  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55754828 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 55754895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 10750068 - 10750235
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  10750068 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 10750167  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10750168 tgatcagatcaagtatctcttagaacagttgtctaagcaagcccaaccttagttgcacacccaactct 10750235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 10963837 - 10964004
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  10963837 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 10963936  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10963937 tgatcagatcaagtatctcttagaacagttgtctaagcaagcccaaccttagttgcacacccaactct 10964004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 451912 - 451752
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | || |||||||||||||||||||||||||| ||||||    
T  451912 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 451813  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  451812 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 451752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 30935995 - 30936155
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | || |||||||||||||||||||||||||| ||||||    
T  30935995 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 30936094  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30936095 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 30936155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 36019675 - 36019508
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  36019675 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaagga 36019576  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36019575 tgatcagatcaagtatctcttagaacaattgtataagcaagcccaaccttagttgcacacccaactct 36019508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 24641655 - 24641466
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  24641655 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 24641556  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  24641555 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 24641466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 21997752 - 21997592
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | | | || |||||||||||||||||||||||||| ||||||    
T  21997752 ctatccagaagaagagtacatcacaagggctgcaagaattcatgttgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 21997653  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21997652 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 21997592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 18761981 - 18762162
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||| || ||||||||| |||||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  18761981 ctttctatccagaagaggaatacatcacatgggctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 18762080  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttact 185  Q
    ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  18762081 tgaacaaatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttact 18762162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 27657988 - 27657799
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| |  |||||||||||| |||||||||||||||||| | ||||| ||    
T  27657988 ctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaaaaagaaaga 27657889  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  27657888 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 27657799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 24026938 - 24027100
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||  ||||||||||    
T  24026938 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctactcaagaagaagga 24027037  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || ||||||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  24027038 tgagcaaatcaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 24027100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 17919454 - 17919294
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||  ||||||||||    
T  17919454 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctactcaagaagaagga 17919355  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 161  Q
    ||| || ||||||||||| || |||||| |||| ||| |||||||||||||||||||||||    
T  17919354 tgagcaaatcaagtatcttttggaacagatgtacaagaaagcccaaccttagttgcacacc 17919294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 40469494 - 40469654
Alignment:
Q  3 ttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatg 102  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40469494 ttctatctagaagaagagtacattacaagggctgctagaattcatgctggatttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatg 40469593  T
Q  103 atcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    | || || ||||| || || |||||  |||||||||||||| |||||||||||||||||||    
T  40469594 agcaaattaagtaccttttggaacaaatgtataagcaagccaaaccttagttgcacaccca 40469654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 19953855 - 19954017
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||| || |||||||||||||||||  ||||||||||    
T  19953855 ctttctacccagaagaatagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaataagggaaaaggatgagctactcaagaagaagga 19953954  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || |||||||| || |||||| |||| ||||||| |||||||||||||||||||||    
T  19953955 tgagcaaattaagtatcttttggaacagatgtacaagcaagtccaaccttagttgcacaccca 19954017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 16257270 - 16257112
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||   ||||||||| |||| ||||| |||||||||||  | ||||||||    
T  16257270 ctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctactcaaaaagaagga 16257171  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 159  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  16257170 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 16257112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 18762203 - 18762275
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| | ||||   |||||||||| |||||||||||||||||||||    
T  18762203 tataaatattatcattgtttctgaaatattatgctctattcttttaactctaatgatatttattgtttttaat 18762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 27657765 - 27657692
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| |||||||||||||||||||||    
T  27657765 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgtttttaat 27657692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 24641432 - 24641359
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  24641432 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 24641359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 3e-73; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 38096371 - 38096204
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||||||||||||||||||||||||||||||||||| ||||||||    
T  38096371 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctacttcaaaagaagga 38096272  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38096271 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 38096204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 51655387 - 51655554
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  51655387 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcagaagaagga 51655486  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51655487 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 51655554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 7508585 - 7508418
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||   |||| |||||||||| |||||||||||||||||||||||||||||    
T  7508585 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctacttcagaagaagga 7508486  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7508485 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 7508418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 36245943 - 36246110
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||| |||||||||||||||| |||||||| |||||||| |||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  36245943 ctttctatccataagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctacttcagaagaagga 36246042  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36246043 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 36246110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 12731791 - 12731631
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | || |||||||||||||||||||||||||| ||||||    
T  12731791 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 12731692  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12731691 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 12731631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 12742384 - 12742224
Alignment:
Q  5 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | || |||||||||||||||||||||||||| ||||||    
T  12742384 ctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaagatgat 12742285  T
Q  105 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12742284 cagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaac 12742224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 35400055 - 35400244
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  35400055 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 35400154  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  35400155 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 35400244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 35647580 - 35647769
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  35647580 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 35647679  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  35647680 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 35647769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 5834512 - 5834323
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  5834512 ctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 5834413  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  5834412 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 5834323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 47617449 - 47617616
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  47617449 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 47617548  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  47617549 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactct 47617616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 3172908 - 3172719
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| |  |||||||||||| |||||||||||||||||| | ||||| ||    
T  3172908 ctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaaaaagaaaga 3172809  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  3172808 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 3172719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4168563 - 4168401
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  4168563 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctacttaagaagaagga 4168464  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  4168463 tgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 4168401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 19180247 - 19180085
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  19180247 ctttctatctagaagaagagtatattacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttaagaagaagga 19180148  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  19180147 tgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacaccca 19180085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 5649269 - 5649429
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||  | ||||||||    
T  5649269 ctttctacccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctactcaataagaagga 5649368  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 161  Q
    ||| ||||| |||||||| || |||||| |||| |||||||||||||||||||||||||||    
T  5649369 tgagcagattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 5649429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 21864984 - 21864824
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||||| |||||||||||||||||  | ||||||||    
T  21864984 ctttctatccagaagaagagtacatcacaagggcaacaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctactcaaaaagaagga 21864885  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 161  Q
    ||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||||    
T  21864884 tgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcacacc 21864824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 153163 - 153326
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||| ||||||||  ||||| |||| ||||||||||||||| | ||||| ||| |||||| |||| |||| | |||||||||||||||    
T  153163 ctttctatccagaagatgagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaagaatgaacaacttcagaagaagga 153262  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 164  Q
    ||| || || |||||||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  153263 tgagcaaattaagtatctattggaacagttgtataagcaagccaaaccttagttgcacacccaa 153326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 12622689 - 12622847
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||    |||||||||||||| |||||||||||||||||  | ||||||||    
T  12622689 ctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctggatacaaaagaagaatgagggaaaaggatgagctactcaaaaagaagga 12622788  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 159  Q
     || || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  12622789 cgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 12622847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 3172685 - 3172611
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttcta--cagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||     |||||||||| |||||||||||||||||||||    
T  3172685 tataaatattatcattgtttctgaaatattatgttctatttttttttaactctaatgatatttattgtttttaat 3172611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 35400278 - 35400351
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  35400278 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 35400351  T

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Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 35647803 - 35647876
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttcta-cagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||    |||||||||| ||||||||||||| |||||||    
T  35647803 tataaatattatcattgtttctgaaatattatgttctattttttttaactctaatgatatttattgattttaat 35647876  T

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Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 7680561 - 7680466
Alignment:
Q  3 ttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaag 98  Q
    ||||||||||||| ||| |||||| |||||||||  |||||||| |  ||||| | ||||||| ||||||  ||||||||   |||||||||||||    
T  7680561 ttctatccagaagcagattacatctcaagggctgatagaattcaagaagggctgagaagaagactgagagccaaggatgaataacttcagaagaag 7680466  T

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Target: scaffold0133 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 32477 - 32310
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||  ||||| |||||||||| |||||||||||||||||||| ||||||||    
T  32477 ctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctacttcaaaagaagga 32378  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32377 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactct 32310  T

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Target: scaffold0105 (Bit Score: 131; Significance: 6e-68; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 46494 - 46683
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||| ||    
T  46494 ctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctacttaagaagaaaga 46593  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagcttgtttttacttgtgttct 193  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  46594 tgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc---tagcttgtttttacttttgttct 46683  T

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Target: scaffold0105; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 46717 - 46789
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttttaat 307  Q
    ||||||||||||||||||||||||||  ||| ||||||   |||||||||| ||||||||||||| |||||||    
T  46717 tataaatattatcattgtttctgaaatattatgttctatttttttaactctaatgatatttattgattttaat 46789  T

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Target: scaffold0906 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 3438 - 3599
Alignment:
Q  3 ttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatg 102  Q
    ||||| ||||| ||||| ||||||||||| |||||||||||||||||||||| ||| |||| | | || |||||||||||||||||||||||||||||||    
T  3438 ttctacccagaggaagaatacatcacaagagctgcaagaattcatgctgggcataagagaaaattaagggaaaaggatgagctacttcagaagaaggatg 3537  T
Q  103 atcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 164  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3538 atcagatcagatatctcttagagcagttgtataagcaagcccaaccttagttgcacacccaa 3599  T

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Target: scaffold0906; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 3666 - 3738
Alignment:
Q  235 tataaatattatcattgtttctgaaaatttaagttctacagttttaactctgatgatatttattgtttttaat 307  Q
    |||||||||||||||||||| | |||   || |||||| | |||||| |||||||||||||||||||||||||    
T  3666 tataaatattatcattgtttattaaatcatatgttctatacttttaattctgatgatatttattgtttttaat 3738  T

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Target: scaffold1216 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 429 - 267
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  429 ctttctatccataagaagagtacattacaagggctgctagaattcatgctggatttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 330  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 163  Q
    ||| || || ||||| || || |||||  |||||||||||||| |||||||||||||||||||    
T  329 tgagcaaattaagtaccttttggaacaaatgtataagcaagccaaaccttagttgcacaccca 267  T

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Target: scaffold0022 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 52486 - 52649
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||| ||||||||  ||||| |||| ||||||||||||||| | ||||| ||| |||||| ||||||||| | |||||||||||||||    
T  52486 ctttctatccagaagatgagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaagaagga 52585  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 164  Q
    ||| || || |||||||| || |||||| |||||||||||| | ||||||||||||||||||||    
T  52586 tgagcaaattaagtatctattggaacagatgtataagcaagtcaaaccttagttgcacacccaa 52649  T

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Target: scaffold0454 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 2535 - 2420
Alignment:
Q  75 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactcttttagc 174  Q
    ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | |||||||||||||||||||||||||||||||||   ||||    
T  2535 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc---tagc 2439  T
Q  175 ttgtttttacttgtgttct 193  Q
    ||||| |||||| ||||||    
T  2438 ttgttcttacttttgttct 2420  T

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Target: scaffold0454; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 2630 - 2528
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    ||||||||||||| | ||| ||||||||||| |||||||||||| ||||||||| ||| || |   | ||||| ||||| || |||||||||||||||||    
T  2630 ctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactacttcagaagaagga 2531  T
Q  101 tga 103  Q
    |||    
T  2530 tga 2528  T

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Target: scaffold0398 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0398
Description:

Target: scaffold0398; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 3253 - 3416
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||| ||||||||||| || |||||  |||| ||||  |||||||| |||||||| ||||||||| | |||| | || |||| | |||||||||||||||    
T  3253 ctttttatccagaagatgattacatttcaagagctgatagaattcaagctgggctgaaaagaagactaagagcacagaatgaacaacttcagaagaagga 3352  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 164  Q
    ||| ||||| || ||||| || |||||| ||||||||| |||| ||||||||||||||||||||    
T  3353 tgagcagattaaatatctattggaacagatgtataagctagccaaaccttagttgcacacccaa 3416  T

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Target: scaffold0398; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 11508 - 11671
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||| ||||||||||| || ||||   |||| ||||  |||||||| |||||||| ||||||||| | |||| | |  | || | |||||||||||||||    
T  11508 ctttttatccagaagatgattacaattcaagagctgatagaattcaagctgggctgaaaagaagactaagagcacaaaaagaacaacttcagaagaagga 11607  T
Q  101 tgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 164  Q
    ||| ||||| || ||||| || |||||| ||||||||| |||| ||||||||||||||||||||    
T  11608 tgagcagattaaatatctattggaacagatgtataagctagccaaaccttagttgcacacccaa 11671  T

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Target: scaffold0747 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3619 - 3556
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaag 64  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  3619 ctttctatccagaagaagagtacatcacaagagctgcaagaatacatgctgggtttaaaagaag 3556  T

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Target: scaffold0199 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 23892 - 23803
Alignment:
Q  75 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 164  Q
    ||||||||||||||||||||||||||||| ||||| |   |||||||||| |||||  | || |||||||||||||||||||||||||||    
T  23892 aaggatgagctacttcagaagaaggatgaacagattagacatctcttagagcagttaaagaaacaagcccaaccttagttgcacacccaa 23803  T

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Target: scaffold1002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold1002
Description:

Target: scaffold1002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2768 - 2870
Alignment:
Q  1 ctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaagga 100  Q
    |||||||||||||||| || ||||   |||||||||  |||||||| |||||||| ||||||||| ||| || |||| |||| | |||||||||||||||    
T  2768 ctttctatccagaagatgattacacttcaagggctgatagaattcaagctgggctgaaaagaagactgaaagcaaagaatgatcaacttcagaagaagga 2867  T
Q  101 tga 103  Q
    |||    
T  2868 tga 2870  T

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Target: scaffold1002; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 2863 - 2952
Alignment:
Q  75 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 164  Q
    |||||||| | |||||||||||||||||| ||||| || |||||  | |||||| ||| ||||| |||| ||||||||||||||||||||    
T  2863 aaggatgaacaacttcagaagaaggatgagcagattaaatatctactggaacagatgtctaagctagccaaaccttagttgcacacccaa 2952  T

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Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 23879 - 23758
Alignment:
Q  39 agaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagc 138  Q
    |||||||| | |||||| ||||||||| ||| || | ||  ||| | |||||| ||||||||||| ||||| || ||||| || |||||| ||| |||||    
T  23879 agaattcaagatgggctgaaaagaagagtgacagcacagactgaacaacttcaaaagaaggatgagcagattaaatatcttttggaacagatgtctaagc 23780  T
Q  139 aagcccaaccttagttgcacac 160  Q
     |||| ||||||||||||||||    
T  23779 tagccaaaccttagttgcacac 23758  T

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