View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8902A_high_25 (Length: 285)
Name: NF8902A_high_25
Description: NF8902A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8902A_high_25 |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 6 - 270
Target Start/End: Original strand, 37035140 - 37035404
Alignment:
| Q |
6 |
ataaaatacccaaatagacttttatccaccaaggatcgtcgtctaagatnnnnnnnnttgttcaatataataaaagttagtaatgtgtcttatgtcttat |
105 |
Q |
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| T |
37035140 |
ataaaatacccaaatagacttttatccaccaaggatcgtcgtctaagataaaaaaaattgttcaatataattaaagttagtaatgtgtcttatgtcttat |
37035239 |
T |
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| Q |
106 |
tccgtgttcttatgtccaatacttacatttttagataatcaaacgtattcatcctgttgaagtacatggattcgatacaagttaagaacacagtggcttg |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
37035240 |
tccgtgttcttatgtccaatacttacatttttagataatcaaacgtattcatcctgttgaagtacatggagtcgatacaagttaagaacacagtggcttg |
37035339 |
T |
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| Q |
206 |
ggttaggtgatagatgtacaatcgtatggcttataggtcaattctatcatgtttctgaaagtcat |
270 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
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| T |
37035340 |
ggttaggtgatagatgtacaatcgtatagcttataggtcaattctaacatgtttctgaaagtcat |
37035404 |
T |
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