View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8902A_low_263 (Length: 242)
Name: NF8902A_low_263
Description: NF8902A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8902A_low_263 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 47583857 - 47584080
Alignment:
| Q |
1 |
gcatgttttccccaaaatatgatgtcatttctagcattctatattgaccacaaaatggtgtgccaaatcaacgctaagccttttggtagtttccctagac |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47583857 |
gcatgttttccccaaaatatgatgtcatttctagcattctatattgaccacaaaatggtgtgccaaatcaacgctaagccttttggtagtttccctagac |
47583956 |
T |
|
| Q |
101 |
ttacaaatggctccactccaagagcacacagtagaatgattcactgcctgcacacgtgcatgttactcttctaataatcaatcgccatttctccgagaac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47583957 |
ttacaaatggctccactccaagagcacacactagaatgattcactgcctgcacacgtgcatgttactcttctaataatcaatcgccatttctccgagaac |
47584056 |
T |
|
| Q |
201 |
ctttcataggtttcaacaagattc |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
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|
| T |
47584057 |
ctttcataggtttcaacaagattc |
47584080 |
T |
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