View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8902A_low_266 (Length: 241)

Name: NF8902A_low_266
Description: NF8902A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8902A_low_266
NF8902A_low_266
[»] chr6 (35 HSPs)
chr6 (1-241)||(27629989-27630229)
chr6 (1-233)||(27272863-27273095)
chr6 (3-230)||(4524976-4525203)
chr6 (3-241)||(4546066-4546304)
chr6 (3-241)||(28207118-28207356)
chr6 (3-241)||(4724425-4724663)
chr6 (3-230)||(4757448-4757675)
chr6 (3-230)||(27360292-27360519)
chr6 (3-230)||(27450635-27450862)
chr6 (4-230)||(29572700-29572926)
chr6 (3-191)||(17024988-17025176)
chr6 (3-230)||(30558298-30558525)
chr6 (3-191)||(27007438-27007626)
chr6 (3-191)||(29549204-29549392)
chr6 (3-192)||(29501131-29501320)
chr6 (4-192)||(16944310-16944498)
chr6 (3-230)||(26777909-26778136)
chr6 (3-188)||(24304900-24305085)
chr6 (3-191)||(4772723-4772911)
chr6 (3-191)||(26918106-26918294)
chr6 (3-191)||(27044116-27044304)
chr6 (16-192)||(34463656-34463832)
chr6 (4-191)||(27484843-27485030)
chr6 (3-188)||(15424599-15424784)
chr6 (16-192)||(16673852-16674028)
chr6 (9-113)||(20160508-20160612)
chr6 (9-113)||(22172219-22172323)
chr6 (3-191)||(26116701-26116889)
chr6 (3-191)||(26988727-26988915)
chr6 (16-191)||(3695789-3695964)
chr6 (1-92)||(28162485-28162576)
chr6 (3-188)||(26999802-26999987)
chr6 (3-191)||(16749580-16749768)
chr6 (1-92)||(13522350-13522441)
chr6 (1-92)||(33374533-33374624)
[»] chr5 (47 HSPs)
chr5 (3-241)||(37358891-37359129)
chr5 (4-227)||(15759094-15759317)
chr5 (4-230)||(31826656-31826882)
chr5 (3-230)||(32599705-32599932)
chr5 (3-230)||(37671728-37671955)
chr5 (4-239)||(37754658-37754893)
chr5 (4-230)||(12131854-12132080)
chr5 (4-230)||(37771236-37771462)
chr5 (3-230)||(24681136-24681363)
chr5 (3-230)||(24723663-24723890)
chr5 (4-230)||(30151717-30151943)
chr5 (3-230)||(18375648-18375875)
chr5 (3-230)||(33516055-33516282)
chr5 (16-230)||(8665724-8665938)
chr5 (4-188)||(2510792-2510976)
chr5 (4-188)||(9317192-9317376)
chr5 (3-191)||(31431166-31431354)
chr5 (4-191)||(5637648-5637835)
chr5 (4-191)||(26480130-26480317)
chr5 (3-230)||(28960034-28960261)
chr5 (3-191)||(34616259-34616447)
chr5 (3-188)||(6874043-6874228)
chr5 (3-191)||(3789264-3789452)
chr5 (3-191)||(13325080-13325268)
chr5 (3-191)||(15658996-15659184)
chr5 (1-113)||(22888289-22888401)
chr5 (4-192)||(29967303-29967491)
chr5 (4-192)||(30029152-30029340)
chr5 (3-191)||(30168207-30168395)
chr5 (3-111)||(33292346-33292454)
chr5 (3-191)||(33777225-33777413)
chr5 (1-164)||(25198797-25198960)
chr5 (3-192)||(18500984-18501173)
chr5 (3-192)||(43077986-43078175)
chr5 (3-191)||(11549092-11549280)
chr5 (3-191)||(23718224-23718412)
chr5 (3-191)||(23752686-23752874)
chr5 (16-192)||(40473801-40473977)
chr5 (3-192)||(28648963-28649152)
chr5 (3-192)||(41674446-41674635)
chr5 (1-92)||(13184879-13184970)
chr5 (1-92)||(13440725-13440816)
chr5 (16-191)||(22999363-22999538)
chr5 (1-188)||(23891947-23892134)
chr5 (1-92)||(33877087-33877178)
chr5 (2-92)||(11325634-11325724)
chr5 (151-191)||(9548927-9548967)
[»] chr1 (5 HSPs)
chr1 (3-230)||(51637907-51638134)
chr1 (4-191)||(10962398-10962585)
chr1 (4-192)||(28584708-28584896)
chr1 (3-188)||(41793647-41793832)
chr1 (9-113)||(20460914-20461018)
[»] scaffold0038 (1 HSPs)
scaffold0038 (3-241)||(7616-7854)
[»] chr3 (48 HSPs)
chr3 (3-241)||(6542854-6543092)
chr3 (3-230)||(8211392-8211619)
chr3 (3-230)||(22871254-22871481)
chr3 (3-230)||(22886313-22886540)
chr3 (4-230)||(5013363-5013589)
chr3 (4-230)||(18224842-18225068)
chr3 (4-230)||(31964854-31965080)
chr3 (4-230)||(50134452-50134678)
chr3 (3-230)||(4347064-4347291)
chr3 (3-230)||(5466636-5466863)
chr3 (4-227)||(28338956-28339179)
chr3 (4-230)||(5609703-5609929)
chr3 (3-191)||(5596746-5596934)
chr3 (3-191)||(29149135-29149323)
chr3 (3-230)||(4416567-4416794)
chr3 (3-230)||(28020929-28021156)
chr3 (3-227)||(7996216-7996440)
chr3 (3-227)||(10642724-10642948)
chr3 (3-191)||(18277432-18277620)
chr3 (3-191)||(18292733-18292921)
chr3 (3-191)||(18308034-18308222)
chr3 (4-192)||(24327848-24328036)
chr3 (3-227)||(28116337-28116561)
chr3 (3-111)||(32438927-32439035)
chr3 (17-191)||(18330364-18330538)
chr3 (3-111)||(4892983-4893091)
chr3 (16-192)||(20577255-20577431)
chr3 (3-191)||(35880456-35880644)
chr3 (3-191)||(47023143-47023331)
chr3 (16-192)||(48465604-48465780)
chr3 (3-230)||(17985336-17985563)
chr3 (3-230)||(29665365-29665592)
chr3 (3-192)||(7072901-7073090)
chr3 (3-192)||(11110741-11110930)
chr3 (3-188)||(15741462-15741647)
chr3 (3-192)||(36997469-36997658)
chr3 (3-191)||(4721321-4721509)
chr3 (9-113)||(16626889-16626993)
chr3 (16-192)||(18242416-18242592)
chr3 (16-192)||(51781700-51781876)
chr3 (3-113)||(22387955-22388065)
chr3 (3-188)||(4797033-4797218)
chr3 (16-192)||(51796788-51796965)
chr3 (1-92)||(4625736-4625827)
chr3 (1-92)||(17994159-17994250)
chr3 (34-188)||(18050955-18051109)
chr3 (34-191)||(6192006-6192163)
chr3 (9-113)||(18530165-18530269)
[»] chr7 (29 HSPs)
chr7 (3-230)||(4145348-4145575)
chr7 (4-230)||(26275320-26275546)
chr7 (3-227)||(45387037-45387261)
chr7 (3-230)||(31564624-31564851)
chr7 (16-230)||(3444985-3445199)
chr7 (4-230)||(26320095-26320321)
chr7 (4-191)||(9618381-9618568)
chr7 (4-230)||(24592767-24592993)
chr7 (16-230)||(26485982-26486196)
chr7 (3-191)||(5127722-5127910)
chr7 (1-188)||(16041059-16041246)
chr7 (3-230)||(16736685-16736912)
chr7 (3-230)||(16751739-16751966)
chr7 (3-230)||(17523223-17523450)
chr7 (3-230)||(17529765-17529992)
chr7 (3-113)||(5159330-5159440)
chr7 (5-191)||(31124641-31124827)
chr7 (16-192)||(26538111-26538287)
chr7 (3-230)||(26434948-26435175)
chr7 (4-191)||(26670140-26670327)
chr7 (3-192)||(11441289-11441478)
chr7 (1-110)||(16450218-16450327)
chr7 (3-230)||(5147565-5147792)
chr7 (3-188)||(2154306-2154491)
chr7 (3-188)||(16503605-16503790)
chr7 (3-188)||(16518641-16518826)
chr7 (3-191)||(11425001-11425189)
chr7 (1-92)||(31088684-31088775)
chr7 (1-92)||(45733292-45733383)
[»] chr4 (21 HSPs)
chr4 (3-230)||(31126857-31127084)
chr4 (3-191)||(19373005-19373193)
chr4 (3-230)||(21969406-21969633)
chr4 (7-230)||(54833095-54833318)
chr4 (4-230)||(40105978-40106204)
chr4 (3-230)||(14098246-14098473)
chr4 (16-230)||(30753447-30753661)
chr4 (3-192)||(18800961-18801150)
chr4 (3-191)||(14763643-14763831)
chr4 (3-111)||(24112489-24112597)
chr4 (3-111)||(34189296-34189404)
chr4 (3-191)||(36344851-36345039)
chr4 (16-192)||(39850366-39850542)
chr4 (1-164)||(1900031-1900194)
chr4 (1-164)||(15227644-15227807)
chr4 (3-230)||(27163656-27163883)
chr4 (3-188)||(14664765-14664950)
chr4 (3-191)||(24592650-24592838)
chr4 (151-230)||(5005575-5005654)
chr4 (16-192)||(33674162-33674338)
chr4 (9-113)||(15285270-15285374)
[»] scaffold0336 (1 HSPs)
scaffold0336 (3-191)||(7961-8149)
[»] chr2 (35 HSPs)
chr2 (3-230)||(39889748-39889975)
chr2 (3-230)||(12716933-12717160)
chr2 (4-230)||(22926357-22926583)
chr2 (4-230)||(31875967-31876193)
chr2 (4-230)||(34861366-34861592)
chr2 (4-230)||(37686238-37686464)
chr2 (4-230)||(37701503-37701729)
chr2 (3-230)||(21677510-21677737)
chr2 (3-191)||(37925218-37925406)
chr2 (3-230)||(16829666-16829893)
chr2 (3-230)||(16891588-16891815)
chr2 (3-230)||(32049484-32049711)
chr2 (4-192)||(19416828-19417016)
chr2 (3-191)||(261093-261281)
chr2 (3-191)||(37374886-37375074)
chr2 (16-192)||(40233223-40233399)
chr2 (1-164)||(21703487-21703650)
chr2 (3-192)||(13936872-13937061)
chr2 (3-192)||(34279173-34279362)
chr2 (16-56)||(9350335-9350375)
chr2 (16-56)||(12586661-12586701)
chr2 (16-56)||(27777067-27777107)
chr2 (16-56)||(27803552-27803592)
chr2 (16-56)||(27816834-27816874)
chr2 (3-230)||(11635517-11635744)
chr2 (3-230)||(11641706-11641933)
chr2 (3-188)||(23128894-23129079)
chr2 (3-188)||(27434772-27434957)
chr2 (16-192)||(39052169-39052345)
chr2 (1-92)||(3784481-3784572)
chr2 (1-92)||(31891651-31891742)
chr2 (1-92)||(34156838-34156929)
chr2 (1-92)||(34303626-34303717)
chr2 (136-188)||(12655270-12655322)
chr2 (136-188)||(20837646-20837698)
[»] scaffold0350 (1 HSPs)
scaffold0350 (4-230)||(7579-7805)
[»] chr8 (20 HSPs)
chr8 (3-241)||(12093031-12093269)
chr8 (4-230)||(19208659-19208885)
chr8 (3-191)||(18710315-18710503)
chr8 (7-230)||(19286155-19286378)
chr8 (3-230)||(31354214-31354441)
chr8 (3-192)||(31490048-31490237)
chr8 (3-241)||(29828992-29829230)
chr8 (3-192)||(3329817-3330006)
chr8 (4-192)||(33258451-33258639)
chr8 (4-191)||(28362254-28362441)
chr8 (3-188)||(14557359-14557544)
chr8 (3-188)||(16277286-16277471)
chr8 (34-188)||(2137588-2137742)
chr8 (3-192)||(19518441-19518630)
chr8 (3-227)||(19674131-19674355)
chr8 (1-92)||(9354453-9354544)
chr8 (1-92)||(19659332-19659423)
chr8 (1-92)||(44562932-44563023)
chr8 (34-188)||(19687830-19687984)
chr8 (3-188)||(16283181-16283366)
[»] scaffold0237 (1 HSPs)
scaffold0237 (3-230)||(15269-15496)
[»] scaffold0144 (1 HSPs)
scaffold0144 (16-230)||(26554-26768)
[»] scaffold0159 (2 HSPs)
scaffold0159 (4-202)||(9406-9604)
scaffold0159 (4-56)||(19879-19931)
[»] scaffold0029 (1 HSPs)
scaffold0029 (3-191)||(469-657)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-164)||(20168-20331)
[»] scaffold0089 (1 HSPs)
scaffold0089 (3-188)||(29495-29680)
[»] scaffold0496 (1 HSPs)
scaffold0496 (4-56)||(73-125)
[»] scaffold0143 (1 HSPs)
scaffold0143 (16-188)||(27024-27196)
[»] scaffold0415 (1 HSPs)
scaffold0415 (23-56)||(5853-5886)


Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 27629989 - 27630229
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacagggg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| |||||||||||||||||||||| ||||||||||||    
T  27629989 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatatggtgtacaggggtatggtggaggtagctgagcaacattaacagggg 27630088  T
Q  101 cgacagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgt 200  Q
    ||||||||||| ||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27630089 cgacagtagccgtagactgacctgctcccgaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgt 27630188  T
Q  201 agaagactcacccttctcaaatacaatgataccctctctga 241  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27630189 agaagactcacccttctcaaatacaatgataccctctctga 27630229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 27272863 - 27273095
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacagggg 100  Q
    |||||||||||||| | || |||||| || ||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27272863 gatggcaaaggatactaatagtaaaatggcgggtagaatggatgttgagaatacggtacataggagtatggtggaggtagctgagcagcattaacagggg 27272962  T
Q  101 cgacagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgt 200  Q
    ||||||||||  ||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  27272963 cgacagtagctgtagtctgacctgctccagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcaacccatttgt 27273062  T
Q  201 agaagactcacccttctcaaatacaatgatacc 233  Q
    |||||||||||||||||||||||||||||||||    
T  27273063 agaagactcacccttctcaaatacaatgatacc 27273095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 4525203 - 4524976
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  4525203 tggcaaaggatactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgca 4525104  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||||||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  4525103 acagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 4525004  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  4525003 aagattcagctttctcaaacacaatgat 4524976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 241
Target Start/End: Original strand, 4546066 - 4546304
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  4546066 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 4546165  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||||||  |||| |||  ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  4546166 acggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 4546265  T
Q  203 aagactcacccttctcaaatacaatgataccctctctga 241  Q
    |||| ||| | |||||||| |||||||| || |||||||    
T  4546266 aagattcagctttctcaaacacaatgatcccatctctga 4546304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 241
Target Start/End: Complemental strand, 28207356 - 28207118
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  28207356 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 28207257  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||||||  |||| |||  ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  28207256 acggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 28207157  T
Q  203 aagactcacccttctcaaatacaatgataccctctctga 241  Q
    |||| ||| | |||||||| |||||||| || |||||||    
T  28207156 aagattcagctttctcaaacacaatgatcccatctctga 28207118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 241
Target Start/End: Original strand, 4724425 - 4724663
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  4724425 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 4724524  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||||||  |||| |||  ||  || |||||||| || || ||||| |||||||||||||| ||||| |||||||| |||||  |||| ||||    
T  4724525 acggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccataccttttcgatgcactcgtag 4724624  T
Q  203 aagactcacccttctcaaatacaatgataccctctctga 241  Q
    |||| ||| | |||||||| |||||||| || |||||||    
T  4724625 aagattcagctttctcaaacacaatgatcccatctctga 4724663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 4757675 - 4757448
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||| |||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| |||    
T  4757675 tggcaaagggtactgatgataaaacggtgggaagaacggatgttgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcg 4757576  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  4757575 acagtagccattgattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 4757476  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  4757475 aagattcagctttctcaaacacaatgat 4757448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 27360292 - 27360519
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||| |||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  27360292 tggcaaagggtactgatgataaaacggtgggaagaacggatgttgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 27360391  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||||||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||  |||| ||||    
T  27360392 acggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatgcactcgtag 27360491  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  27360492 aagattcagctttctcaaacacaatgat 27360519  T

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Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 27450635 - 27450862
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||| |||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  27450635 tggcaaagggtactgatgataaaacggtgggaagaacggatgttgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 27450734  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||||||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||  |||| ||||    
T  27450735 acggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatgcactcgtag 27450834  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  27450835 aagattcagctttctcaaacacaatgat 27450862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 29572926 - 29572700
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  29572926 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 29572827  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||    
T  29572826 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtaga 29572727  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  29572726 agattcagctttctcaaacacaatgat 29572700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 17025176 - 17024988
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| ||     
T  17025176 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggagca 17025077  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    |||||||||||||   |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  17025076 acagtagccatagcttgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 17024988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 30558298 - 30558525
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| |  || ||     
T  30558298 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgatgggagca 30558397  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  30558398 acggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 30558497  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  30558498 aagattcagctttctcaaacacaatgat 30558525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 27007626 - 27007438
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| |||||||||||||||||||||||||||||||||||   |||   |||||  ||||| |  ||||| ||||| | ||| ||     
T  27007626 tggcaaagggtactgatgataaaacggtgggaagaatggatgctgagaatacggcatatataggtatgacggaggcatttgagctgcattgataggagca 27007527  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  27007526 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 27007438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 29549392 - 29549204
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  29549392 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagctgcattgataggagca 29549293  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    || |||||||||||  |||| |||| ||  || ||||| || || || ||||| ||||||||||| || ||||| ||||||||||||||    
T  29549292 acggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtgatgtccattaccatacctcttcga 29549204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 29501320 - 29501131
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| |||||||||||||||||||||||||||||||||||   ||| | ||| |  ||||| |  ||||| ||||| | ||| ||     
T  29501320 tggcaaagggtactgatgataaaacggtgggaagaatggatgctgagaatacggcatatatgggtacgacggaggcatttgagctgcattgataggagca 29501221  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  29501220 acggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 29501131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 16944310 - 16944498
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  16944310 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 16944409  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |||||||||| ||  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  16944410 cagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 16944498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 26777909 - 26778136
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  || || | ||| | ||| ||     
T  26777909 tggcaaagggtactgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgggctgtattgataggtgca 26778008  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || ||||    
T  26778009 acagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtag 26778108  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  26778109 aagattcagctttctcaaacacaatgat 26778136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 24304900 - 24305085
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || |||||||| | ||| |||    
T  24304900 tggcagagggtactgatgataaaatggcggaaagaagggatgctgagaatacggcacatatgggtatgacggaggcatttgggcagcattgataggagcg 24304999  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  24305000 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 24305085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 4772911 - 4772723
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||| |||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  4772911 tggcaaagggtactgatgataaaacggtgggaagaacggatgttgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 4772812  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    || |||||||||||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  4772811 acggtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 4772723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 26918294 - 26918106
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  26918294 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagca 26918195  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  26918194 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 26918106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 27044304 - 27044116
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| ||     
T  27044304 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggagca 27044205  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  27044204 acggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 27044116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 34463656 - 34463832
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||| ||||| | ||| || ||||||| ||| |    
T  34463656 tgatggtaaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacagtagtcattg 34463755  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  34463756 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 34463832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 27485030 - 27484843
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  27485030 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 27484931  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    | |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || || ||||||||    
T  27484930 cggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtatctcttcga 27484843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 15424599 - 15424784
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| ||||||||||||||||| ||||| | |||||  ||||| |  || || ||||| | ||| ||     
T  15424599 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagca 15424698  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  15424699 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 15424784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 16674028 - 16673852
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||| |  ||||  ||||| |  ||||| ||||| | ||| || || ||||| || |    
T  16674028 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatatatggatatgacggaggcatttgagctgcattgataggagcaacggtagctattg 16673929  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |  |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  16673928 attgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 16673852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 20160612 - 20160508
Alignment:
Q  9 aggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagta 108  Q
    |||||| ||||||||||| |||||  |||| ||||| ||||| ||  ||||| |   ||||||||||||||  |||| ||||||||||||||| ||||||    
T  20160612 aggatactgatggtaaaatggtggatagaaaggatgttgagagtaatgtgcaaacaggtatggtggaggtaattgagtagcattaacaggggcaacagta 20160513  T
Q  109 gccat 113  Q
    |||||    
T  20160512 gccat 20160508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 22172219 - 22172323
Alignment:
Q  9 aggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagta 108  Q
    |||||| ||||||||||| |||||  |||| ||||| ||||| ||  ||||| |   ||||||||||||||  |||| ||||||||||||||| ||||||    
T  22172219 aggatactgatggtaaaatggtggatagaaaggatgttgagagtaatgtgcaaacaggtatggtggaggtaattgagtagcattaacaggggcaacagta 22172318  T
Q  109 gccat 113  Q
    |||||    
T  22172319 gccat 22172323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 26116701 - 26116889
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| | |||||||||||||||   ||| | |||||  ||||| |  ||||| | ||| | ||| ||     
T  26116701 tggcaaagggtactgatgataaaacggtgggaagaacgaatgctgagaatacggcatatatgggtatgacggaggcatttgagctgtattgataggagca 26116800  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    || ||||| |||||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  26116801 acggtagctatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 26116889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 26988915 - 26988727
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| ||     
T  26988915 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagca 26988816  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  26988815 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 26988727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 3695964 - 3695789
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  3695964 tgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 3695865  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  3695864 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 3695789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 28162576 - 28162485
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| | |||||||||||||||||||||    
T  28162576 gatggcaaaggatactgatgatagaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgatggaggtagctgagcagcatt 28162485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 26999987 - 26999802
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| ||     
T  26999987 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagca 26999888  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  26999887 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 26999802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 16749768 - 16749580
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||  |  ||||| || || | ||| ||     
T  16749768 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggagacatttgagctgcgttgataggagca 16749669  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  16749668 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 16749580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13522350 - 13522441
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  13522350 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 13522441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33374533 - 33374624
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  33374533 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 33374624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 241
Target Start/End: Original strand, 37358891 - 37359129
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  37358891 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 37358990  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||||||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  37358991 acggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 37359090  T
Q  203 aagactcacccttctcaaatacaatgataccctctctga 241  Q
    |||| ||| | ||||||||||||||||| || |||||||    
T  37359091 aagattcagctttctcaaatacaatgatcccatctctga 37359129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 227
Target Start/End: Original strand, 15759094 - 15759317
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  15759094 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 15759193  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  ||||||||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||| |||||| |||    
T  15759194 cagtagccattgattgacctgctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgacgcacttgcaga 15759293  T
Q  204 agactcacccttctcaaatacaat 227  Q
    ||| ||| | |||||||| |||||    
T  15759294 agattcagctttctcaaacacaat 15759317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 31826656 - 31826882
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  31826656 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 31826755  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||    
T  31826756 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtaga 31826855  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  31826856 agattcagctttctcaaacacaatgat 31826882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 32599705 - 32599932
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| ||     
T  32599705 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggagca 32599804  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||| ||| ||  |||| |||| ||  || ||||| || || || |||||||||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  32599805 acagtagtcattgattgaccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 32599904  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  32599905 aagattcagctttctcaaacacaatgat 32599932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 37671728 - 37671955
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  37671728 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 37671827  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||||||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  37671828 acggtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 37671927  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  37671928 aagattcagctttctcaaacacaatgat 37671955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 37754893 - 37754658
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| |  ||||  ||||| |  ||||| ||||| | ||| || |    
T  37754893 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatggatatgacggaggcatttgagctgcattgataggtgcaa 37754794  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| |||||| |||    
T  37754793 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcacttgcaga 37754694  T
Q  204 agactcacccttctcaaatacaatgataccctctct 239  Q
    ||| ||| | |||||||| |||||||| || |||||    
T  37754693 agattcagctttctcaaacacaatgatcccatctct 37754658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 12132080 - 12131854
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  12132080 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 12131981  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || |||||||||||  |||| |||||    
T  12131980 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctcttcgatgcactcgtaga 12131881  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  12131880 agattcagctttctcaaacacaatgat 12131854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 37771236 - 37771462
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| |  || |  ||||| |  ||||| ||||| | ||| || |    
T  37771236 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatggatacgacggaggcatttgagctgcattgataggtgcaa 37771335  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||    
T  37771336 cagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtaga 37771435  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  37771436 agattcagctttctcaaacacaatgat 37771462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 24681363 - 24681136
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  24681363 tggcaaagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgca 24681264  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  24681263 acagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 24681164  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  24681163 aagattcagctttctcaaacacaatgat 24681136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 24723890 - 24723663
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  24723890 tggcaaagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgca 24723791  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  24723790 acagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 24723691  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  24723690 aagattcagctttctcaaacacaatgat 24723663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 30151943 - 30151717
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| |  || || |    
T  30151943 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgatgggagcaa 30151844  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||    
T  30151843 cagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtaga 30151744  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  30151743 agattcagctttctcaaacacaatgat 30151717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 18375648 - 18375875
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| |  || ||     
T  18375648 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgatgggagca 18375747  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| ||||    
T  18375748 acagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtag 18375847  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  18375848 aagattcagctttctcaaacacaatgat 18375875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 33516282 - 33516055
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| |  || ||     
T  33516282 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagccgcattgatgggagca 33516183  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  33516182 acggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 33516083  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  33516082 aagattcagctttctcaaacacaatgat 33516055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 8665724 - 8665938
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||| ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  8665724 tgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatggcggaggcatttgagctgcattgataggagcaacagtagccattg 8665823  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 215  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | ||    
T  8665824 attgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagcttt 8665923  T
Q  216 ctcaaatacaatgat 230  Q
    |||||| ||||||||    
T  8665924 ctcaaacacaatgat 8665938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 2510976 - 2510792
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| || |    
T  2510976 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggagcaa 2510877  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    | |||||||| ||  |||| |||| ||  ||||||||||| || || ||||| |||||||||||||| ||||| |||||||||||    
T  2510876 cggtagccatggattgaccggctccagctgataccattcccacttccgtttctttcttcttgtggtgtccattaccatacctctt 2510792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 9317376 - 9317192
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  9317376 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 9317277  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  9317276 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctctt 9317192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 31431354 - 31431166
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  31431354 tggcagagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 31431255  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    |||||||||| |||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  31431254 acagtagccacagattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 31431166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 5637835 - 5637648
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  5637835 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 5637736  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  5637735 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 5637648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 26480317 - 26480130
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  26480317 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 26480218  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  26480217 cagtagccattgattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcga 26480130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 28960034 - 28960261
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || ||  |||| | ||| ||     
T  28960034 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctacattgataggtgca 28960133  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||| | ||  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  28960134 acagtagccgttgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 28960233  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  28960234 aagattcagctttctcaaacacaatgat 28960261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 34616447 - 34616259
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| ||     
T  34616447 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggtgca 34616348  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    |||||||||||||   |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  34616347 acagtagccatagcttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 34616259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 6874228 - 6874043
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||  ||||| | ||| ||     
T  6874228 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagttgcattgataggagca 6874129  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||| ||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  6874128 acagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctctt 6874043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 3789452 - 3789264
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  3789452 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 3789353  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  3789352 acggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 3789264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 13325080 - 13325268
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||| |||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  13325080 tggcaaagggtactgatgataaaacggtgggaagaacggatgttgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 13325179  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  13325180 acggtagccattgattgaccagctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 13325268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 15658996 - 15659184
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || |||||||||||||| || ||||| |||||||||||||||||  |||| |  ||||  ||||| |  ||||  ||||| | ||| ||     
T  15658996 tggcagagggtactgatggtaaaacggcggaaagaaaggatgctgagaatacggcacatatggatatgacggaggcatttgagttgcattgataggagca 15659095  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  15659096 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 15659184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 22888401 - 22888289
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacagggg 100  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| || || ||||| | ||| |  ||||||| ||| |||||||||| |||||    
T  22888401 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaatagggg 22888302  T
Q  101 cgacagtagccat 113  Q
    | |||||||||||    
T  22888301 caacagtagccat 22888289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 29967303 - 29967491
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  29967303 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 29967402  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |||||||||| ||  | || |||| ||  || ||||| || || || ||||| ||||| |||||||| ||||| ||||| |||||||||    
T  29967403 cagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttctttttgtggtgtccattaccatatctcttcgac 29967491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 30029340 - 30029152
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  30029340 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 30029241  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |||||||||| ||  | || |||| ||  || ||||| || || || ||||| ||||| |||||||| ||||| ||||| |||||||||    
T  30029240 cagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttctttttgtggtgtccattaccatatctcttcgac 30029152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 30168395 - 30168207
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| |  || ||     
T  30168395 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgatgggagca 30168296  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    | ||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  30168295 atagtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcga 30168207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 33292454 - 33292346
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||| |  || || | |||||||||||| | ||| ||     
T  33292454 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgataggagca 33292355  T
Q  103 acagtagcc 111  Q
    |||||||||    
T  33292354 acagtagcc 33292346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 33777413 - 33777225
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  33777413 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagca 33777314  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  33777313 acagtagccatggattgaccagctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 33777225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 25198960 - 25198797
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacagggg 100  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||||| ||||| | ||| |  ||||| |  || | |||||||| ||| |    
T  25198960 gatggcaaaggatactgatgatagaatggtggaaagaaaggatgctgagagtacggcgcatatgggtacgacggaggcaattgggaagcattaataggag 25198861  T
Q  101 cgacagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttctt 164  Q
    | ||||||||||| ||  |||| ||||  | ||||||||| || || |||||||||||||||||    
T  25198860 caacagtagccatggattgaccggctccggcggataccatccctacttctgtttccttcttctt 25198797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 18500984 - 18501173
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||  ||||| | ||| ||     
T  18500984 tggcagagggtactgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagttgcattgataggagca 18501083  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  18501084 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 18501173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 43078175 - 43077986
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||||||||||||||| |||||||||||||||||    || | ||| |  ||||| |  ||||| ||||| | ||| ||     
T  43078175 tggcagagggtactgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtacgacggaggcatttgagctgcattgataggtgca 43078076  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |||||||||||||   |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  43078075 acagtagccatagcttgaccggctccagttgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 43077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 11549280 - 11549092
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| ||||| ||||| |||||||| ||||||||  |||| | |||||  ||||| |  || || ||||| | ||| ||     
T  11549280 tggcagagggtactgatgataaaatggtggaaagaaaggatgctgtgaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagca 11549181  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  11549180 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 11549092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 23718224 - 23718412
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| ||     
T  23718224 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagca 23718323  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  23718324 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 23718412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 23752686 - 23752874
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| ||     
T  23752686 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagca 23752785  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  23752786 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 23752874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 40473801 - 40473977
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||    |  | |||||  ||||| |  ||||| ||||| | |||||| ||||||||||| |    
T  40473801 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatgtgtgggtatgacggaggcatttgagctgcattgataggggcaacagtagccattg 40473900  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || || |||||||||    
T  40473901 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtatctcttcgac 40473977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 28649152 - 28648963
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| | ||| | ||  ||     
T  28649152 tggcaaagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgtattgatagttgca 28649053  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |||||||||||||   |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  28649052 acagtagccatagcttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 28648963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 41674635 - 41674446
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||||||||| || || ||||| |||||||||| ||||||  |||| | |||||  ||||| |  || || | ||| | ||| ||     
T  41674635 tggcagagggtactgatggtaaaatggcggaaagaaaggatgctgagcatacggcacatatgggtatgacggaggcatttgggctgtattgataggagca 41674536  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||||||    
T  41674535 acagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgac 41674446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13184879 - 13184970
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  13184879 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 13184970  T

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Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13440725 - 13440816
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  13440725 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 13440816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 22999363 - 22999538
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  22999363 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 22999462  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    |  |||| |||| ||  || ||||| || |  || ||||| |||||||||||||| ||||| ||||||||||||||    
T  22999463 attgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccatacctcttcga 22999538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 23892134 - 23891947
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacagggg 100  Q
    |||||||||||||| ||||| || || | ||| ||||| ||||||||||| ||||| ||||| | ||| |  ||||| |  || |||||||||| ||| |    
T  23892134 gatggcaaaggatactgatgatagaatgttggaaagaaaggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggag 23892035  T
Q  101 cgacagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    | ||||||||||| ||  || | ||||  |  |||||||| || || |||||||| |||||||| || || || || |||||||||||    
T  23892034 caacagtagccatggattgatcggctccggcagataccatccctacttctgtttctttcttcttatgatgtccgttaccatacctctt 23891947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33877178 - 33877087
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  33877178 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 33877087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 11325724 - 11325634
Alignment:
Q  2 atggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    ||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  11325724 atggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 11325634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 9548927 - 9548967
Alignment:
Q  151 gtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  9548927 gtttctttcttcttgtggtgtccattaccatacctcttcga 9548967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 51638134 - 51637907
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  51638134 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 51638035  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||| |||||| ||    
T  51638034 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgacgcacttgcag 51637935  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  51637934 aagattcagctttctcaaacacaatgat 51637907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 10962585 - 10962398
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  10962585 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 10962486  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  10962485 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 10962398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 28584896 - 28584708
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  28584896 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatacgggtatgacggaggcatttgagctgcattgataggagcaa 28584797  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |||||||||| ||  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  28584796 cagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 28584708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 41793647 - 41793832
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || |||||||| ||||| |||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| ||     
T  41793647 tggcagagggtactgatgataaaatggcgggaagaaaggatgttgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggagca 41793746  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    || |||||||| ||  |||| |||| ||  ||||||||||| || || ||||| |||||||||||||| ||||| |||||||||||    
T  41793747 acggtagccatggattgaccggctccagctgataccattcccacttccgtttctttcttcttgtggtgtccattaccatacctctt 41793832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 20461018 - 20460914
Alignment:
Q  9 aggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagta 108  Q
    |||||||||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| || ||||||| ||| |||||||||| |||||| | ||||    
T  20461018 aggatattgatgatagaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacggcggaggtaactgggcagcattaataggggcaatagta 20460919  T
Q  109 gccat 113  Q
    |||||    
T  20460918 gccat 20460914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 241
Target Start/End: Complemental strand, 7854 - 7616
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  7854 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 7755  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||||||  |||| |||  ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  7754 acggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 7655  T
Q  203 aagactcacccttctcaaatacaatgataccctctctga 241  Q
    |||| ||| | |||||||| |||||||| || |||||||    
T  7654 aagattcagctttctcaaacacaatgatcccatctctga 7616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 241
Target Start/End: Original strand, 6542854 - 6543092
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  6542854 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgca 6542953  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  6542954 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 6543053  T
Q  203 aagactcacccttctcaaatacaatgataccctctctga 241  Q
    |||| ||| | |||||||| |||||||| || |||||||    
T  6543054 aagattcagctttctcaaacacaatgatcccatctctga 6543092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 8211619 - 8211392
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| ||||| ||||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  8211619 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcgcatatgggtatgacggaggcatttgagctgcattgataggagca 8211520  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| | ||    
T  8211519 acagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgcag 8211420  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    | |||||| | |||||||| ||||||||    
T  8211419 aggactcagctttctcaaacacaatgat 8211392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 22871254 - 22871481
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| | |||||| ||||| | ||| ||     
T  22871254 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatctgagctgcattgataggtgca 22871353  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||||||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| | ||    
T  22871354 acagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgcag 22871453  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    | || ||| | |||||||| ||||||||    
T  22871454 aggattcagctttctcaaacacaatgat 22871481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 22886313 - 22886540
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| | |||||| ||||| | ||| ||     
T  22886313 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatctgagctgcattgataggtgca 22886412  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||||||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| | ||    
T  22886413 acagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgcag 22886512  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    | || ||| | |||||||| ||||||||    
T  22886513 aggattcagctttctcaaacacaatgat 22886540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 5013589 - 5013363
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| |  || || |    
T  5013589 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgatgggagcaa 5013490  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||    
T  5013489 cagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtaga 5013390  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  5013389 agattcagctttctcaaacacaatgat 5013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 18225068 - 18224842
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  18225068 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 18224969  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||    
T  18224968 cagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtaga 18224869  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  18224868 agattcagctttctcaaacacaatgat 18224842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 31964854 - 31965080
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||||    
T  31964854 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcga 31964953  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    | |||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||    
T  31964954 cggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtaga 31965053  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  31965054 agattcagctttctcaaacacaatgat 31965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 50134452 - 50134678
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||||    
T  50134452 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcga 50134551  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    | |||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||    
T  50134552 cggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtaga 50134651  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  50134652 agattcagctttctcaaacacaatgat 50134678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 4347064 - 4347291
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   | | | |||||  ||||| |  || || || || | ||| ||     
T  4347064 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatacatgggtatgacggaggcatttgggctgcgttgataggagca 4347163  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  4347164 acagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 4347263  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  4347264 aagattcagctttctcaaacacaatgat 4347291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 5466863 - 5466636
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||| ||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  5466863 tggcaaagggtactgatgataaaatggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgca 5466764  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||||||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||| ||  | || ||||    
T  5466763 acagtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctctttgatgcgctcgtag 5466664  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  5466663 aagattcagctttctcaaacacaatgat 5466636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 28339179 - 28338956
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||||    
T  28339179 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcga 28339080  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    | |||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||    
T  28339079 cggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtaga 28338980  T
Q  204 agactcacccttctcaaatacaat 227  Q
    ||| ||| | |||||||| |||||    
T  28338979 agattcagctttctcaaacacaat 28338956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 5609703 - 5609929
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| ||||||||||||||||    ||| | |||||  ||||| |  ||||| ||||| | ||| ||||    
T  5609703 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacgtcatatatgggtatgacggaggcatttgagctgcattgataggagcga 5609802  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    | |||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||| ||| |||| |||||    
T  5609803 cggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctctttgacgcactcgtaga 5609902  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  5609903 agattcagctttctcaaacacaatgat 5609929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 5596746 - 5596934
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| |||||||||||||||||||||||||||||||||||   ||| | ||| |  ||||| |  ||||| ||||| | ||| ||     
T  5596746 tggcaaagggtactgatgataaaacggtgggaagaatggatgctgagaatacggcatatatgggtacgacggaggcatttgagctgcattgataggagca 5596845  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  5596846 acggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 5596934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 29149135 - 29149323
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| ||     
T  29149135 tggcaaagggtactgatgataaaacggtgggaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagca 29149234  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    | ||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  29149235 atagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 29149323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 4416794 - 4416567
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| |  ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||  ||||| | ||| ||     
T  4416794 tggcaaagggtgctgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagttgcattgataggagca 4416695  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||| ||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || ||||    
T  4416694 acagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtag 4416595  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  4416594 aagattcagctttctcaaacacaatgat 4416567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 28021156 - 28020929
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || | ||| | ||| ||     
T  28021156 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgtattgataggagca 28021057  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  | || |||| ||  || ||||| || || || |||||||||||||||||||| || || ||||||||||| ||  |||| ||||    
T  28021056 acagtagccatggattgcccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccgttaccatacctctttgatgcactcgtag 28020957  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  28020956 aagattcagctttctcaaacacaatgat 28020929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 7996440 - 7996216
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||| ||||| |  ||||| ||||| |  || ||     
T  7996440 tggcagagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatggcggaggcatttgagctgcattgatgggagca 7996341  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| | ||    
T  7996340 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgaggcactcgcag 7996241  T
Q  203 aagactcacccttctcaaatacaat 227  Q
    |||| ||| | |||||||| |||||    
T  7996240 aagattcagctttctcaaacacaat 7996216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 10642948 - 10642724
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||| ||||| |  ||||| ||||| |  || ||     
T  10642948 tggcagagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatggcggaggcatttgagctgcattgatgggagca 10642849  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| | ||    
T  10642848 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgaggcactcgcag 10642749  T
Q  203 aagactcacccttctcaaatacaat 227  Q
    |||| ||| | |||||||| |||||    
T  10642748 aagattcagctttctcaaacacaat 10642724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 18277432 - 18277620
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||  ||||| | ||| ||     
T  18277432 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagttgcattgataggagca 18277531  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||| ||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  18277532 acagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 18277620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 18292733 - 18292921
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||  ||||| | ||| ||     
T  18292733 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagttgcattgataggagca 18292832  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||| ||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  18292833 acagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 18292921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 18308034 - 18308222
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||  ||||| | ||| ||     
T  18308034 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagttgcattgataggagca 18308133  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||| ||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  18308134 acagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 18308222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 24328036 - 24327848
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  24328036 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 24327937  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |||||||||| ||  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  24327936 cagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 24327848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 227
Target Start/End: Original strand, 28116337 - 28116561
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  28116337 tggcagagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 28116436  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  28116437 acggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 28116536  T
Q  203 aagactcacccttctcaaatacaat 227  Q
    |||| ||| | |||||||| |||||    
T  28116537 aagattcagctttctcaaacacaat 28116561  T

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Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 32439035 - 32438927
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||| |  || || | |||||||||||| ||||| ||     
T  32439035 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgacaggagca 32438936  T
Q  103 acagtagcc 111  Q
    |||||||||    
T  32438935 acagtagcc 32438927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 18330538 - 18330364
Alignment:
Q  17 gatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccataga 116  Q
    |||| ||||| ||||| ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| ||    
T  18330538 gatgataaaatggtggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgga 18330439  T
Q  117 ccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
      |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  18330438 ttgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 18330364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 4893091 - 4892983
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||| |  || || | |||||||||||| | ||| ||     
T  4893091 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgataggagca 4892992  T
Q  103 acagtagcc 111  Q
    |||||||||    
T  4892991 acagtagcc 4892983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 20577255 - 20577431
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||  ||||| | ||| || ||||||||||| |    
T  20577255 tgatggtaaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagttgcattgataggagcaacagtagccattg 20577354  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  20577355 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 20577431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 35880644 - 35880456
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  35880644 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagca 35880545  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  35880544 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 35880456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 47023331 - 47023143
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||  ||||| | ||| ||     
T  47023331 tggcagagggtactgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagttgcattgataggagca 47023232  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  47023231 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 47023143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 48465780 - 48465604
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||| || |    
T  48465780 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagctattg 48465681  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |  |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  48465680 attgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 48465604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 17985336 - 17985563
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| |  || ||     
T  17985336 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgatgggagca 17985435  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||||| || ||  |||| ||||    
T  17985436 acggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctttttgatgcactcgtag 17985535  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  17985536 aagattcagctttctcaaacacaatgat 17985563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 29665365 - 29665592
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| |||||    || | |||||  ||||| |  ||||| ||||| | ||| ||     
T  29665365 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcatgtatgggtatgacggaggcatttgagctgcattgataggagca 29665464  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||   |||| ||||    
T  29665465 acggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcggtgcactcgtag 29665564  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| |||   |||||||| ||||||||    
T  29665565 aagattcagttttctcaaacacaatgat 29665592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 7073090 - 7072901
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||||||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  7073090 tggcagagggtactgatggtaaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 7072991  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    ||||||||||| ||  |||  |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||||||    
T  7072990 acagtagccatggattgactggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgac 7072901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 11110741 - 11110930
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||  ||||| | ||| ||     
T  11110741 tggcagagggtactgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagttgcattgataggagca 11110840  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || |||||||||||||||||||| ||||| ||||| |||||||||    
T  11110841 acggtagccatggattgaccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccattaccatatctcttcgac 11110930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 15741462 - 15741647
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| ||     
T  15741462 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagca 15741561  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| |||||||||||||||||    
T  15741562 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattgccatacctctt 15741647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 36997469 - 36997658
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||| ||||| | ||| ||     
T  36997469 tggcagagggtactgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagctgcattgataggagca 36997568  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  36997569 acggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 36997658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 4721509 - 4721321
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || |||||  ||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  4721509 tggcagagggtactgatgataaaatggcggaaagaaaagatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagca 4721410  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  4721409 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 4721321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 16626889 - 16626993
Alignment:
Q  9 aggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagta 108  Q
    |||||| ||||| || |||||||| ||||| ||||||||||| ||  ||||||| | ||| |  ||||||| ||| |||||||||| |||||| ||||||    
T  16626889 aggatactgatgatagaacggtggaaagaagggatgctgagagtattgtgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagta 16626988  T
Q  109 gccat 113  Q
    |||||    
T  16626989 gccat 16626993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 18242592 - 18242416
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  18242592 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 18242493  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  18242492 attgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 18242416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 51781876 - 51781700
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||    || | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  51781876 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 51781777  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  51781776 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 51781700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 22387955 - 22388065
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||| ||||||||| ||||||||||| || |||||||| | ||| |  || || | |||||||||||| | ||| ||     
T  22387955 tggcaaagggtactgatgataaaacgatgggaagaacggatgctgagagtatggtgcataagggtaggacgggggaaactgagcagcattgataggagca 22388054  T
Q  103 acagtagccat 113  Q
    |||||||||||    
T  22388055 acagtagccat 22388065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 4797033 - 4797218
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| ||     
T  4797033 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagca 4797132  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  4797133 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 4797218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 51796965 - 51796788
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||    || | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  51796965 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 51796866  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtg-gccattgccatacctcttcgac 192  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| |||||| ||||| |||||||||    
T  51796865 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtgccattaccatatctcttcgac 51796788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4625827 - 4625736
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  4625827 gatggcaaaggatactgatgatataatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 4625736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17994159 - 17994250
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  17994159 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 17994250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 188
Target Start/End: Complemental strand, 18051109 - 18050955
Alignment:
Q  34 aagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctctagagg 133  Q
    ||||| ||||| ||||||||||| ||||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| ||  |||| |||| ||  |    
T  18051109 aagaaaggatgttgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgaccggctccagctg 18051010  T
Q  134 ataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    | ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  18051009 acaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 18050955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 6192163 - 6192006
Alignment:
Q  34 aagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctctagagg 133  Q
    ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| ||  |||| |||| |   |    
T  6192163 aagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgaccggctccaactg 6192064  T
Q  134 ataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    | ||||| |  || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  6192063 acaccatccatacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 6192006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 18530269 - 18530165
Alignment:
Q  9 aggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagta 108  Q
    |||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| | |||||||| ||| |||||||||| |||||  ||||||    
T  18530269 aggatactgatgatagaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgatggaggtaactgggcagcattaataggggtaacagta 18530170  T
Q  109 gccat 113  Q
    |||||    
T  18530169 gccat 18530165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 4145348 - 4145575
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  4145348 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 4145447  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || ||||    
T  4145448 acagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtag 4145547  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  4145548 aagattcagctttctcaaacacaatgat 4145575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 26275320 - 26275546
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  26275320 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 26275419  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || |||||||||||  |||| |||||    
T  26275420 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctcttcgatgcactcgtaga 26275519  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  26275520 agattcagctttctcaaacacaatgat 26275546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 45387261 - 45387037
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  45387261 tggcagagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 45387162  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||| |||||| ||    
T  45387161 acagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgacgcacttgcag 45387062  T
Q  203 aagactcacccttctcaaatacaat 227  Q
    |||| ||| | |||||||| |||||    
T  45387061 aagattcagctttctcaaacacaat 45387037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 31564624 - 31564851
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||| |||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  31564624 tggcaaagggtactgatgataaaacggtgggaagaacggatgttgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 31564723  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||||||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||  |||| ||||    
T  31564724 acggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatgcactcgtag 31564823  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  31564824 aagattcagctttctcaaacacaatgat 31564851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 3445199 - 3444985
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||    || | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  3445199 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 3445100  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 215  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  3445099 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 3445000  T
Q  216 ctcaaatacaatgat 230  Q
    |||||| ||||||||    
T  3444999 ctcaaacacaatgat 3444985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 26320095 - 26320321
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  26320095 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 26320194  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || |||||||||||   ||| |||||    
T  26320195 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctcttcgatgtactcgtaga 26320294  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  26320295 agattcagctttctcaaacacaatgat 26320321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 9618568 - 9618381
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  9618568 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 9618469  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    |||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  9618468 cagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcga 9618381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 24592767 - 24592993
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  24592767 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 24592866  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| || ||  |||    
T  24592867 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcatttacaga 24592966  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
     || ||| | |||||||| ||||||||    
T  24592967 ggattcagctttctcaaacacaatgat 24592993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 26485982 - 26486196
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||| || |    
T  26485982 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagctattg 26486081  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 215  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  26486082 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 26486181  T
Q  216 ctcaaatacaatgat 230  Q
    |||||| ||||||||    
T  26486182 ctcaaacacaatgat 26486196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 5127910 - 5127722
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| |||||| ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  5127910 tggcagaggatactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagca 5127811  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  5127810 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 5127722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 16041246 - 16041059
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacagggg 100  Q
    |||| ||||||||| ||||| || || ||||| ||||| ||||||||||| || || ||||| | ||| |  ||||||| ||| |||||||||| |||||    
T  16041246 gatgacaaaggatactgatgatagaatggtggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaatagggg 16041147  T
Q  101 cgacagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    | ||||||||||| ||  |||| ||||  |  |||||||| || || |||||||| |||||||| || || || || |||||||||||    
T  16041146 caacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccatacctctt 16041059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 16736685 - 16736912
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| |||||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||  |  ||||| ||||| | ||| ||     
T  16736685 tggcagagggtattgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggagacatttgagctgcattgataggagca 16736784  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| |||| | ||    
T  16736785 acggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgacgcactcgcag 16736884  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  16736885 aagattcagctttctcaaacacaatgat 16736912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 16751739 - 16751966
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| |||||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||  |  ||||| ||||| | ||| ||     
T  16751739 tggcagagggtattgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggagacatttgagctgcattgataggagca 16751838  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| |||| | ||    
T  16751839 acggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgacgcactcgcag 16751938  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  16751939 aagattcagctttctcaaacacaatgat 16751966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 17523450 - 17523223
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| |||||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||  |  ||||| ||||| | ||| ||     
T  17523450 tggcagagggtattgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggagacatttgagctgcattgataggagca 17523351  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| |||| | ||    
T  17523350 acggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgacgcactcgcag 17523251  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  17523250 aagattcagctttctcaaacacaatgat 17523223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 17529765 - 17529992
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| |||||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||  |  ||||| ||||| | ||| ||     
T  17529765 tggcagagggtattgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggagacatttgagctgcattgataggagca 17529864  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| |||| | ||    
T  17529865 acggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgacgcactcgcag 17529964  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  17529965 aagattcagctttctcaaacacaatgat 17529992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 5159440 - 5159330
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||| |  || || | |||||||||||| | ||| ||     
T  5159440 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgataggagca 5159341  T
Q  103 acagtagccat 113  Q
    |||||||||||    
T  5159340 acagtagccat 5159330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 191
Target Start/End: Complemental strand, 31124827 - 31124641
Alignment:
Q  5 gcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgac 104  Q
    ||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||    
T  31124827 gcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaac 31124728  T
Q  105 agtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
     |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  31124727 ggtagccattgattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 31124641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 26538111 - 26538287
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||| || |    
T  26538111 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagctattg 26538210  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |  |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  26538211 attgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 26538287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 26435175 - 26434948
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| ||| | | ||| ||     
T  26435175 tggcagagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcactgataggagca 26435076  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||| ||||| ||| |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||   |||| ||||    
T  26435075 acagtggccatggactgaccggctcctgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcggtgcactcgtag 26434976  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  26434975 aagattcagctttctcaaacacaatgat 26434948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 26670140 - 26670327
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  26670140 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 26670239  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    | ||||| || ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  26670240 cggtagctattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 26670327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 11441478 - 11441289
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||| ||||| | ||| ||     
T  11441478 tggcagagggtactgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagctgcattgataggagca 11441379  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  11441378 acggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 11441289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16450218 - 16450327
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacagggg 100  Q
    |||||||||||||| ||||| ||||| ||||| ||||| ||||||||||| ||| | || || | ||| |  ||||||| ||| |||||||||| |||||    
T  16450218 gatggcaaaggatactgatgataaaatggtggaaagaagggatgctgagagtactgcgcgtacgggtacgacggaggtaactgggcagcattaatagggg 16450317  T
Q  101 cgacagtagc 110  Q
    | ||||||||    
T  16450318 caacagtagc 16450327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 5147565 - 5147792
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||||||||||||||| ||||||||||| |||||   ||| |  ||||  ||||| |  ||||| ||||| | ||| ||     
T  5147565 tggcagagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcatatatggatatgacggaggcatttgagctgcattgataggagca 5147664  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    |  |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  || | | ||    
T  5147665 atggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcattcgcag 5147764  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  5147765 aagattcagctttctcaaacacaatgat 5147792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 2154491 - 2154306
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| ||     
T  2154491 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagca 2154392  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  2154391 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 2154306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 16503605 - 16503790
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    |||||| ||||| ||||| || || || || ||||| ||||||||||| ||||| ||||| | |||||  ||||| |  || |||||||||| ||| ||     
T  16503605 tggcaagggatactgatgatagaatggcggaaagaaaggatgctgagagtacggcgcatatgggtatgacggaggcatttgggcagcattaataggagca 16503704  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| || || |||||||||||    
T  16503705 acagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccatacctctt 16503790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 16518641 - 16518826
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    |||||| ||||| ||||| || || || || ||||| ||||||||||| ||||| ||||| | |||||  ||||| |  || |||||||||| ||| ||     
T  16518641 tggcaagggatactgatgatagaatggcggaaagaaaggatgctgagagtacggcgcatatgggtatgacggaggcatttgggcagcattaataggagca 16518740  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| || || |||||||||||    
T  16518741 acagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccatacctctt 16518826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 11425001 - 11425189
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||||||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||| |  || ||  |||| | ||| ||     
T  11425001 tggcagagggtactgatggtaaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgggctacattgataggagca 11425100  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  11425101 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 11425189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31088684 - 31088775
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  31088684 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 31088775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 45733383 - 45733292
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  45733383 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 45733292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 31126857 - 31127084
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  31126857 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgataggagca 31126956  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  31126957 acagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 31127056  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  31127057 aagattcagctttctcaaacacaatgat 31127084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 19373193 - 19373005
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  19373193 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagctgcattgataggagca 19373094  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    || |||||||||||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  19373093 acggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 19373005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 21969633 - 21969406
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| |||||||| |||||||| |||||||||||||||||   ||| | |||||| ||||| |  ||||| ||||| |  || ||     
T  21969633 tggcagagggtactgatgataaaacggcgggaagaaaggatgctgagaatacggcatatatgggtatggcggaggcatttgagctgcattgatgggagca 21969534  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| || ||||||||||| ||||| ||||||||||||||  |||| ||||    
T  21969533 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttcttttttcttgtggtgtccattaccatacctcttcgatgcactcgtag 21969434  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  21969433 aagattcagctttctcaaacacaatgat 21969406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 230
Target Start/End: Complemental strand, 54833318 - 54833095
Alignment:
Q  7 aaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacag 106  Q
    ||||| || ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||    
T  54833318 aaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacag 54833219  T
Q  107 tagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaaga 206  Q
    | ||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||| |||| | ||||||    
T  54833218 tggccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgacgcactcgcagaaga 54833119  T
Q  207 ctcacccttctcaaatacaatgat 230  Q
     ||| | |||||||| ||||||||    
T  54833118 ttcagctttctcaaacacaatgat 54833095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 40105978 - 40106204
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  40105978 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 40106077  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| | ||| || ||||| |||||  |||| |||||    
T  40106078 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtctattaccgtaccttttcgatgcactcgtaga 40106177  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  40106178 agattcagctttctcaaacacaatgat 40106204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 14098473 - 14098246
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  14098473 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgataggagca 14098374  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| || ||  ||    
T  14098373 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcatttacag 14098274  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    | || ||| | |||||||| ||||||||    
T  14098273 aggattcagctttctcaaacacaatgat 14098246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 30753661 - 30753447
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  30753661 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccatgg 30753562  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 215  Q
    |  |||| |||| ||  || | ||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  30753561 attgaccggctccagctgacatcatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 30753462  T
Q  216 ctcaaatacaatgat 230  Q
    |||||| ||||||||    
T  30753461 ctcaaacacaatgat 30753447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 18800961 - 18801150
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  18800961 tggcaaagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgca 18801060  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |||||||||||||   |||| |||| ||  || ||||| || || |||||||| |||||||||||||| ||||| ||||| |||||||||    
T  18801061 acagtagccatagcttgaccggctccagctgacaccatccccacttctgtttctttcttcttgtggtgtccattaccatatctcttcgac 18801150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 14763643 - 14763831
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||  ||||| | ||| ||     
T  14763643 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagttgcattgataggagca 14763742  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||| ||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  14763743 acagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 14763831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 24112597 - 24112489
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||| |  || || | |||||||||||| ||||| ||     
T  24112597 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgacaggagca 24112498  T
Q  103 acagtagcc 111  Q
    |||||||||    
T  24112497 acagtagcc 24112489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 34189296 - 34189404
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||| |  || || | |||||||||||| | ||| |||    
T  34189296 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgataggagcg 34189395  T
Q  103 acagtagcc 111  Q
    |||||||||    
T  34189396 acagtagcc 34189404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 36344851 - 36345039
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    |||||||||||| ||||| ||||||||| ||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||  ||||| | ||| ||     
T  36344851 tggcaaaggatactgatgataaaacggtaggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagttgcattgataggagca 36344950  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||| ||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  36344951 acagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 36345039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 39850542 - 39850366
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||    || | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  39850542 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatgtatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccattg 39850443  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |  |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  39850442 attgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 39850366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 1900194 - 1900031
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacagggg 100  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| || || ||||| | ||| |  ||||||| ||| |||||||||| |||||    
T  1900194 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaatagggg 1900095  T
Q  101 cgacagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttctt 164  Q
    | ||||||||||| ||  |||| ||||  |  |||||||| || || |||||||| ||||||||    
T  1900094 caacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttctt 1900031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 15227807 - 15227644
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacagggg 100  Q
    |||||||||||||||||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||| ||| |||||||||| |||||    
T  15227807 gatggcaaaggatattgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaatagggg 15227708  T
Q  101 cgacagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttctt 164  Q
    | ||||||||||| ||  |||| ||||  |  |||||||| || || |||||||| ||||||||    
T  15227707 caacagtagccatggattgaccagctccggcagataccatccctacttctgtttctttcttctt 15227644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 27163656 - 27163883
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| |  || ||     
T  27163656 tggcagagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgatgggagca 27163755  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| ||||    
T  27163756 acagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtag 27163855  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  27163856 aagattcagctttctcaaacacaatgat 27163883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 14664950 - 14664765
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| ||||||||||||||||||||||| | |||||  ||||| |  || |||||||| | ||| ||     
T  14664950 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggtgcatatgggtatgacggaggcatttgggcagcattgataggagca 14664851  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  14664850 acagtagccatggattgaccagctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 14664765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 24592650 - 24592838
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  24592650 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagca 24592749  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || |  || ||||| |||||||||||||| ||||| ||||||||||||||    
T  24592750 acagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccatacctcttcga 24592838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 5005654 - 5005575
Alignment:
Q  151 gtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 230  Q
    ||||| |||||||||||||| ||||| |||||||||||||||  ||| | |||||| ||| | |||||||| ||||||||    
T  5005654 gtttctttcttcttgtggtgtccattaccatacctcttcgacgtactcgcagaagattcagctttctcaaacacaatgat 5005575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 33674162 - 33674338
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||| ||||||||||| ||||||||||| |||||    || | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  33674162 tgatggtaaaatggtgggaagaacggatgctgagagtacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 33674261  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  33674262 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 33674338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 15285270 - 15285374
Alignment:
Q  9 aggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagta 108  Q
    |||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | |||   |||||||| ||| |||||||||| |||||| ||||||    
T  15285270 aggatactgatgatagaatggtggaaagaaaggatgctgagagtattgcgcatatgggtacaatggaggtaactgggcagcattaataggggcaacagta 15285369  T
Q  109 gccat 113  Q
    |||||    
T  15285370 gccat 15285374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 8149 - 7961
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  8149 tggcaaaggatactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 8050  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    |||||||||| |||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  8049 acagtagccacagattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 7961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 39889975 - 39889748
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  39889975 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 39889876  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||| ||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  39889875 acagtggccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 39889776  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  39889775 aagattcagctttctcaaacacaatgat 39889748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 12716933 - 12717160
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  12716933 tggcaaagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgca 12717032  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  12717033 acagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 12717132  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  12717133 aagattcagctttctcaaacacaatgat 12717160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 22926357 - 22926583
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||||    
T  22926357 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcga 22926456  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    | |||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||    
T  22926457 cggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtaga 22926556  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  22926557 agattcagctttctcaaacacaatgat 22926583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 31876193 - 31875967
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  31876193 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 31876094  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||    
T  31876093 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtaga 31875994  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  31875993 agattcagctttctcaaacacaatgat 31875967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 34861592 - 34861366
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  34861592 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 34861493  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||    
T  34861492 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtaga 34861393  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  34861392 agattcagctttctcaaacacaatgat 34861366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 37686238 - 37686464
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  37686238 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 37686337  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||    
T  37686338 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtaga 37686437  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  37686438 agattcagctttctcaaacacaatgat 37686464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 37701503 - 37701729
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  37701503 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 37701602  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||    
T  37701603 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtaga 37701702  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  37701703 agattcagctttctcaaacacaatgat 37701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 21677510 - 21677737
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||| ||||| |  ||||| ||||| | ||| ||     
T  21677510 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatggcggaggcatttgagctgcattgataggagca 21677609  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || ||||    
T  21677610 acagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtag 21677709  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  21677710 aagattcagctttctcaaacacaatgat 21677737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 37925406 - 37925218
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  37925406 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 37925307  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  37925306 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 37925218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 16829666 - 16829893
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||  ||||| |  || ||     
T  16829666 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagttgcattgatgggagca 16829765  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  16829766 acggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 16829865  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  16829866 aagattcagctttctcaaacacaatgat 16829893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 16891815 - 16891588
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||  ||||| |  || ||     
T  16891815 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagttgcattgatgggagca 16891716  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| ||||    
T  16891715 acggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtag 16891616  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  16891615 aagattcagctttctcaaacacaatgat 16891588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 32049711 - 32049484
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||| ||||| |  ||||| ||||| |  || ||     
T  32049711 tggcagagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatggcggaggcatttgagctgcattgatgggagca 32049612  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| || ||||||||||| ||||| ||||||||||||||  |||| ||||    
T  32049611 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttcttttttcttgtggtgtccattaccatacctcttcgaggcactcgtag 32049512  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  32049511 aagattcagctttctcaaacacaatgat 32049484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 19416828 - 19417016
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  19416828 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagccgcattgataggagcaa 19416927  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |||||||||| ||  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  19416928 cagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 19417016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 261093 - 261281
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||  ||||| | ||| ||     
T  261093 tggcagagggtactgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagttgcattgataggagca 261192  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  261193 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 261281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 37375074 - 37374886
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| |||||||| |||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||  || || | ||| ||     
T  37375074 tggcaaagggtactgatgataaaacggcgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagttgcgttgataggagca 37374975  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  37374974 acagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 37374886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 40233399 - 40233223
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  40233399 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 40233300  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  40233299 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 40233223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 21703487 - 21703650
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacagggg 100  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| || || ||||| | ||| |  ||||||| ||  |||||||||| |||||    
T  21703487 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactaggcagcattaatagggg 21703586  T
Q  101 cgacagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttctt 164  Q
    | ||||||||||| ||  |||| ||||  |  |||||||| || || |||||||| ||||||||    
T  21703587 caacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttctt 21703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 13936872 - 13937061
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||||||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  13936872 tggcagagggtactgatggtaaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 13936971  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  13936972 acagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 13937061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 34279362 - 34279173
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||||||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  34279362 tggcagagggtactgatggtaaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 34279263  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    ||||||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||||||    
T  34279262 acagtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgac 34279173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 9350335 - 9350375
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacgg 56  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  9350335 tgatggtaaaacggtgggaagaaaggatgctgagaatacgg 9350375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 12586701 - 12586661
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacgg 56  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  12586701 tgatggtaaaacggtgggaagaaaggatgctgagaatacgg 12586661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 27777107 - 27777067
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacgg 56  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  27777107 tgatggtaaaacggtgggaagaaaggatgctgagaatacgg 27777067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 27803592 - 27803552
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacgg 56  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  27803592 tgatggtaaaacggtgggaagaaaggatgctgagaatacgg 27803552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 27816874 - 27816834
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacgg 56  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  27816874 tgatggtaaaacggtgggaagaaaggatgctgagaatacgg 27816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 11635517 - 11635744
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  11635517 tggcagagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 11635616  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| ||||  |  || ||||| || || || | ||| |||||||||||||| ||||| |||||||||||| || |||| | ||    
T  11635617 acggtagccatggattgaccggctcctgctgacaccatccccacttccgcttctttcttcttgtggtgtccattaccatacctcttcaacgcactcgcag 11635716  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  11635717 aagattcagctttctcaaacacaatgat 11635744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 11641706 - 11641933
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  11641706 tggcagagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 11641805  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| ||||  |  || ||||| || || || | ||| |||||||||||||| ||||| |||||||||||| || |||| | ||    
T  11641806 acggtagccatggattgaccggctcctgctgacaccatccccacttccgcttctttcttcttgtggtgtccattaccatacctcttcaacgcactcgcag 11641905  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  11641906 aagattcagctttctcaaacacaatgat 11641933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 23128894 - 23129079
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| ||||||||||||||||| ||||| | |||||  ||||| |  || || ||||| | ||| ||     
T  23128894 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagca 23128993  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| || || |||||||||||    
T  23128994 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccgttaccatacctctt 23129079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 27434772 - 27434957
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| || || ||||| ||||| ||||||||||| ||||| ||||| | ||| |  ||||| |  || |||||||||| ||| ||     
T  27434772 tggcaaagggtactgatgatagaatggtggaaagaaaggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagca 27434871  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| || || |||||||||||    
T  27434872 acagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccatacctctt 27434957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 39052169 - 39052345
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| |||||   ||| || || || || || |    
T  39052169 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcattggtaggagcaacggttgctattg 39052268  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |  |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  39052269 attgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 39052345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 3784572 - 3784481
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  3784572 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 3784481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31891651 - 31891742
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  31891651 gatggcaaaggatactgatgatagaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 31891742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 34156929 - 34156838
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  34156929 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 34156838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34303626 - 34303717
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  34303626 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 34303717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 12655322 - 12655270
Alignment:
Q  136 accattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    |||||||| || || ||||| |||||||||||||| ||||| |||||||||||    
T  12655322 accattcctacttccgtttctttcttcttgtggtgtccattaccatacctctt 12655270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 20837698 - 20837646
Alignment:
Q  136 accattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    |||||||| || || ||||| |||||||||||||| ||||| |||||||||||    
T  20837698 accattcctacttccgtttctttcttcttgtggtgtccattaccatacctctt 20837646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 7579 - 7805
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  7579 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 7678  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || |||||||||||  |||| |||||    
T  7679 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctcttcgatgcactcgtaga 7778  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  7779 agattcagctttctcaaacacaatgat 7805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 241
Target Start/End: Original strand, 12093031 - 12093269
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  12093031 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcacttgagctgcattgataggagca 12093130  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    | ||||||||||||  | || |||  ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||| ||||||||  |||| ||||    
T  12093131 atagtagccatagattggccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatgcactcgtag 12093230  T
Q  203 aagactcacccttctcaaatacaatgataccctctctga 241  Q
    |||| ||| | |||||||| |||||||| || |||||||    
T  12093231 aagattcagctttctcaaacacaatgatcccatctctga 12093269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 19208659 - 19208885
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  19208659 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 19208758  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtaga 203  Q
    |||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||| |||||||  |||| |||||    
T  19208759 cagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacttcttcgatgcactcgtaga 19208858  T
Q  204 agactcacccttctcaaatacaatgat 230  Q
    ||| ||| | |||||||| ||||||||    
T  19208859 agattcagctttctcaaacacaatgat 19208885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 18710503 - 18710315
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  18710503 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagctgcattgataggagca 18710404  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    || |||||||| ||  |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  18710403 acggtagccattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 18710315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 230
Target Start/End: Complemental strand, 19286378 - 19286155
Alignment:
Q  7 aaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacag 106  Q
    ||||| || ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||    
T  19286378 aaagggtactgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacag 19286279  T
Q  107 tagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaaga 206  Q
    | ||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||| |||| | ||||||    
T  19286278 tggccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgacgcactcgcagaaga 19286179  T
Q  207 ctcacccttctcaaatacaatgat 230  Q
     ||| | |||||||| ||||||||    
T  19286178 ttcagctttctcaaacacaatgat 19286155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 31354441 - 31354214
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| ||     
T  31354441 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggagca 31354342  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || || ||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || ||||    
T  31354341 acggtggccatggattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtag 31354242  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  31354241 aagattcagctttctcaaacacaatgat 31354214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 31490048 - 31490237
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| | ||||||     
T  31490048 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgataggggca 31490147  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  31490148 acagtagccattgattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgac 31490237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 241
Target Start/End: Complemental strand, 29829230 - 29828992
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  29829230 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 29829131  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| || |   ||    
T  29829130 acggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcattcacag 29829031  T
Q  203 aagactcacccttctcaaatacaatgataccctctctga 241  Q
    | || ||| | |||||||| |||||||| || |||||||    
T  29829030 aggattcagctttctcaaacacaatgattccatctctga 29828992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 3329817 - 3330006
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| |||||||||||||||||||||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  3329817 tggcaaagggtactgatgataaaacggtgggaagaatggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 3329916  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    ||  ||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  3329917 acgatagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 3330006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 33258639 - 33258451
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |    
T  33258639 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaa 33258540  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    |||||||||| ||  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  33258539 cagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgcccattaccatatctcttcgac 33258451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 28362254 - 28362441
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| |  || || |    
T  28362254 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgatgggagcaa 28362353  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    | |||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  28362354 cggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcga 28362441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 14557544 - 14557359
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| |||    
T  14557544 tggcagagggtactgatgataaaatggcggaaagaagggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcg 14557445  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  14557444 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 14557359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 16277471 - 16277286
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| ||||||||||||||||| ||||| | |||||  ||||| |  || || ||||| | ||| ||     
T  16277471 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagca 16277372  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  16277371 acagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 16277286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 188
Target Start/End: Original strand, 2137588 - 2137742
Alignment:
Q  34 aagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctctagagg 133  Q
    ||||| ||||||||||||||||| ||||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| ||  |||| |||| ||  |    
T  2137588 aagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgaccggctccagctg 2137687  T
Q  134 ataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    | ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  2137688 acaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 2137742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 19518441 - 19518630
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||  ||||| | ||| ||     
T  19518441 tggcaaagggtactgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagttgcattgataggagca 19518540  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 192  Q
    ||||||| ||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  19518541 acagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 19518630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 19674355 - 19674131
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| |||||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  19674355 tggcagagggtattgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagca 19674256  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    || |||||||| ||  |||  |||| ||  || ||||| || || || ||||| ||||||||||| || ||||| ||||||||||||||| |||| | ||    
T  19674255 acggtagccatggattgactggctccagctgacaccatccccacgtccgtttctttcttcttgtgatgtccattaccatacctcttcgacgcactcgcag 19674156  T
Q  203 aagactcacccttctcaaatacaat 227  Q
    |||| ||| | ||||| || |||||    
T  19674155 aagattcagctttctcgaacacaat 19674131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9354544 - 9354453
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  9354544 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 9354453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19659332 - 19659423
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  19659332 gatggcaaaggatactgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 19659423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44563023 - 44562932
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcatt 92  Q
    |||||||||||||| ||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||||||||||||||||    
T  44563023 gatggcaaaggatactgatgatagaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 44562932  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 188
Target Start/End: Complemental strand, 19687984 - 19687830
Alignment:
Q  34 aagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctctagagg 133  Q
    ||||| |||||||| |||||||| ||||| | |||||  ||||| |  || |||||||| | ||| || ||||||||||| ||  |||| ||||  |  |    
T  19687984 aagaaaggatgctgggaatacggcgcatatgggtatgacggaggcatttgggcagcattgataggagcaacagtagccatggattgaccggctccggctg 19687885  T
Q  134 ataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    | ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  19687884 acaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 19687830  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 16283366 - 16283181
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    |||||||||||| | ||| || || || || ||||| ||||||||||| ||||| ||||| | ||| |  ||||| |  || |||||||||| ||| ||     
T  16283366 tggcaaaggatactaatgatagaatggcggaaagaaaggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagca 16283267  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| || || |||||||||||    
T  16283266 acagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccatacctctt 16283181  T

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Target: scaffold0237 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 15269 - 15496
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| |  || ||     
T  15269 tggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgatgggagca 15368  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    ||||||||||| ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| ||||    
T  15369 acagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtag 15468  T
Q  203 aagactcacccttctcaaatacaatgat 230  Q
    |||| ||| | |||||||| ||||||||    
T  15469 aagattcagctttctcaaacacaatgat 15496  T

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Target: scaffold0144 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 26554 - 26768
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  26554 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 26653  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 215  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| || ||  ||| || ||| | ||    
T  26654 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcatttacagaggattcagcttt 26753  T
Q  216 ctcaaatacaatgat 230  Q
    |||||| ||||||||    
T  26754 ctcaaacacaatgat 26768  T

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Target: scaffold0159 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 9406 - 9604
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcga 103  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||||    
T  9406 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcga 9505  T
Q  104 cagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 202  Q
    | |||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||| ||| |||| ||||    
T  9506 cggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctctttgacgcactcgtag 9604  T

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Target: scaffold0159; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 19931 - 19879
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacgg 56  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||    
T  19931 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacgg 19879  T

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Target: scaffold0029 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 469 - 657
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||| ||| || ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| ||     
T  469 tggcagagggtactgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagca 568  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 191  Q
    ||||||||||| ||  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  569 acagtagccatggattgaccggctccagttgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 657  T

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Target: scaffold0124 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 20331 - 20168
Alignment:
Q  1 gatggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacagggg 100  Q
    |||||||||||||| ||||| || || | ||| ||||| ||||||||||| || || ||||| | ||| |  ||||||| ||| |||||||||| |||||    
T  20331 gatggcaaaggatactgatgatagaatgatggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaatagggg 20232  T
Q  101 cgacagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttctt 164  Q
    | ||||||||||| ||  |||| ||||  |  |||||||| || || |||||||| ||||||||    
T  20231 caacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttctt 20168  T

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Target: scaffold0089 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 29680 - 29495
Alignment:
Q  3 tggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcg 102  Q
    ||||||||| || ||||| || || || || ||||| ||||||||||||||||| ||||| | ||| | |||||| |  || |||||||||| ||| ||     
T  29680 tggcaaagggtactgatgatagaatggcggaaagaaaggatgctgagaatacggcgcatacgggtacgatggaggcatttgggcagcattaataggagca 29581  T
Q  103 acagtagccatagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    ||||||||||| ||  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| || || |||||||||||    
T  29580 acagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccatacctctt 29495  T

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Target: scaffold0496 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 73 - 125
Alignment:
Q  4 ggcaaaggatattgatggtaaaacggtgggaagaatggatgctgagaatacgg 56  Q
    |||||||| || ||||| ||||||||||||||||| |||||||||||||||||    
T  73 ggcaaagggtactgatgataaaacggtgggaagaacggatgctgagaatacgg 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 27196 - 27024
Alignment:
Q  16 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 115  Q
    ||||| ||||| || || ||||| ||||||||||||||||| ||||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  27196 tgatgataaaatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 27097  T
Q  116 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 188  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  27096 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 27024  T

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Target: scaffold0415 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 5886 - 5853
Alignment:
Q  23 aaaacggtgggaagaatggatgctgagaatacgg 56  Q
    |||||||||||||||| |||||||||||||||||    
T  5886 aaaacggtgggaagaaaggatgctgagaatacgg 5853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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