View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8902A_low_304 (Length: 231)
Name: NF8902A_low_304
Description: NF8902A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8902A_low_304 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 38322867 - 38323091
Alignment:
| Q |
1 |
gaatcttgtgataatctttccaaatcaagcatcgatgattcttctacaattgtgtcaattgttcagcaatatcctcaatatatcatgagatatcctatcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38322867 |
gaatcttgtgataatctttccaaatcaagcatcgatgattcttctacaattgtgtcaattgttcagcaatatcctcaatatatcatgagatatcctatcc |
38322966 |
T |
|
| Q |
101 |
aaagtaaagtagagaaagtagtagaggtagattttcctaagctactttctactttaaattctagttttcgaaacaaggaggaaaaattggcattaatatc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38322967 |
aaagtaaagtagagaaagtagtagaggtagattttcctaagctactttctactttaaattctagttttcgaaacaaggaggaaaaattggcattaatatc |
38323066 |
T |
|
| Q |
201 |
ttcatcagaaatggtagactatgtt |
225 |
Q |
| |
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||||||||||||| ||||||||||| |
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|
| T |
38323067 |
ttcatcagaaatgatagactatgtt |
38323091 |
T |
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