View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8902A_low_305 (Length: 231)
Name: NF8902A_low_305
Description: NF8902A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8902A_low_305 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 31213021 - 31212798
Alignment:
| Q |
1 |
aataattagcttagttttaaaaataactaatttctcatatttgccaattttatcctgagctacactctctctagtgcctcgtagctatagctatcccaaa |
100 |
Q |
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| T |
31213021 |
aataattagcttagttttaaaaataactaatttctcatatttgccaattttatcctgagctacactctctctagtgcctcgtagctatagctatcccaaa |
31212922 |
T |
|
| Q |
101 |
ctaaactatatattaaatcaatcttggaatgatttttgtctccctctgtaagaggacagcataaaactagaattagaagatatttgannnnnnnnattaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |
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| T |
31212921 |
ctaaactatatattaaatcaatcttggaatgatttttgtctccctctgtaagaggacagcataaaactagaatcagaagatatttgattttttttattaa |
31212822 |
T |
|
| Q |
201 |
atccaacacgttttaataattgtg |
224 |
Q |
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||||||||||||||| |||||||| |
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| T |
31212821 |
atccaacacgttttattaattgtg |
31212798 |
T |
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