View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8902A_low_331 (Length: 229)

Name: NF8902A_low_331
Description: NF8902A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8902A_low_331
NF8902A_low_331
[»] scaffold0031 (1 HSPs)
scaffold0031 (18-212)||(46277-46472)
[»] chr8 (48 HSPs)
chr8 (18-212)||(15961135-15961330)
chr8 (18-212)||(18997703-18997898)
chr8 (18-212)||(30473915-30474110)
chr8 (18-212)||(44832217-44832412)
chr8 (18-212)||(6299051-6299246)
chr8 (18-212)||(10477940-10478135)
chr8 (18-212)||(32110892-32111087)
chr8 (18-212)||(995846-996041)
chr8 (18-212)||(18175384-18175579)
chr8 (18-212)||(39257446-39257641)
chr8 (18-212)||(40026803-40026998)
chr8 (18-212)||(11725193-11725388)
chr8 (18-213)||(28274244-28274440)
chr8 (26-212)||(35122353-35122540)
chr8 (18-211)||(18210656-18210850)
chr8 (19-212)||(28582859-28583053)
chr8 (18-212)||(18841907-18842102)
chr8 (26-210)||(44836920-44837105)
chr8 (18-212)||(18568868-18569063)
chr8 (18-212)||(24408879-24409074)
chr8 (18-194)||(19240666-19240843)
chr8 (18-194)||(19313850-19314027)
chr8 (18-204)||(19412834-19413022)
chr8 (18-213)||(11142464-11142666)
chr8 (50-212)||(39997726-39997889)
chr8 (18-191)||(24004779-24004953)
chr8 (18-132)||(23353688-23353803)
chr8 (18-211)||(25875322-25875525)
chr8 (18-75)||(18481929-18481986)
chr8 (18-61)||(39997665-39997708)
chr8 (18-61)||(6299290-6299333)
chr8 (18-61)||(10477853-10477896)
chr8 (18-61)||(11142381-11142424)
chr8 (18-61)||(11725106-11725149)
chr8 (18-61)||(18175297-18175340)
chr8 (18-61)||(18997616-18997659)
chr8 (18-61)||(19240580-19240623)
chr8 (18-61)||(19313764-19313807)
chr8 (18-61)||(19412752-19412795)
chr8 (18-61)||(23353846-23353889)
chr8 (18-61)||(24408795-24408838)
chr8 (18-61)||(30474153-30474196)
chr8 (18-61)||(32111131-32111174)
chr8 (18-61)||(35122585-35122628)
chr8 (18-61)||(39997580-39997623)
chr8 (18-61)||(44832457-44832500)
chr8 (18-61)||(44836824-44836867)
chr8 (19-61)||(18210893-18210935)
[»] chr7 (35 HSPs)
chr7 (18-212)||(3840672-3840867)
chr7 (18-212)||(21804603-21804798)
chr7 (18-212)||(38163370-38163565)
chr7 (18-212)||(42242185-42242380)
chr7 (18-212)||(27138559-27138754)
chr7 (18-212)||(33916978-33917173)
chr7 (18-212)||(31373459-31373654)
chr7 (18-212)||(17178268-17178464)
chr7 (18-212)||(21341826-21342021)
chr7 (18-212)||(21669984-21670179)
chr7 (18-212)||(24924082-24924277)
chr7 (18-212)||(16376576-16376771)
chr7 (18-212)||(21656631-21656826)
chr7 (18-212)||(43933575-43933770)
chr7 (18-211)||(15109697-15109891)
chr7 (18-212)||(40968894-40969089)
chr7 (18-212)||(13786173-13786368)
chr7 (18-212)||(27903448-27903643)
chr7 (18-211)||(21753524-21753718)
chr7 (50-212)||(39030283-39030446)
chr7 (18-63)||(31096703-31096748)
chr7 (18-61)||(15109930-15109973)
chr7 (18-61)||(3840912-3840955)
chr7 (18-61)||(16376812-16376855)
chr7 (18-61)||(17178508-17178551)
chr7 (18-61)||(21341737-21341780)
chr7 (18-61)||(21656547-21656590)
chr7 (18-61)||(21669895-21669938)
chr7 (18-61)||(21804842-21804885)
chr7 (18-61)||(27138798-27138841)
chr7 (18-61)||(31373370-31373413)
chr7 (18-61)||(33917217-33917260)
chr7 (18-61)||(42242424-42242467)
chr7 (18-59)||(43933815-43933856)
chr7 (21-61)||(24924001-24924041)
[»] chr6 (25 HSPs)
chr6 (18-212)||(12597296-12597491)
chr6 (18-212)||(19997668-19997863)
chr6 (18-212)||(33645945-33646140)
chr6 (18-212)||(28099628-28099823)
chr6 (18-212)||(2266771-2266974)
chr6 (18-212)||(10584759-10584954)
chr6 (18-212)||(17202435-17202630)
chr6 (19-212)||(13533771-13533965)
chr6 (18-212)||(2005431-2005626)
chr6 (18-212)||(15044725-15044920)
chr6 (18-212)||(3592896-3593091)
chr6 (18-176)||(17594819-17594979)
chr6 (18-139)||(8539603-8539725)
chr6 (18-139)||(25448752-25448874)
chr6 (118-212)||(1405594-1405688)
chr6 (104-207)||(33035523-33035626)
chr6 (18-61)||(2266684-2266727)
chr6 (18-61)||(10584996-10585039)
chr6 (18-61)||(12597535-12597578)
chr6 (18-61)||(15044639-15044682)
chr6 (18-61)||(17202348-17202391)
chr6 (18-61)||(17594733-17594776)
chr6 (18-61)||(19997580-19997623)
chr6 (18-61)||(28099868-28099911)
chr6 (18-61)||(33645858-33645901)
[»] chr5 (39 HSPs)
chr5 (18-212)||(10729473-10729668)
chr5 (18-212)||(20874691-20874886)
chr5 (18-212)||(34107369-34107564)
chr5 (18-212)||(34110655-34110850)
chr5 (18-212)||(38246896-38247091)
chr5 (18-212)||(16526337-16526532)
chr5 (18-207)||(17373200-17373390)
chr5 (18-208)||(33570342-33570533)
chr5 (18-212)||(2398973-2399166)
chr5 (18-196)||(14141154-14141333)
chr5 (18-204)||(27647933-27648120)
chr5 (18-212)||(1395992-1396187)
chr5 (18-212)||(5479199-5479394)
chr5 (18-212)||(20655080-20655275)
chr5 (18-207)||(29275627-29275817)
chr5 (18-212)||(33375765-33375962)
chr5 (18-201)||(6940545-6940729)
chr5 (26-212)||(24223195-24223382)
chr5 (18-212)||(25099267-25099462)
chr5 (18-212)||(25158357-25158552)
chr5 (18-188)||(1394541-1394712)
chr5 (93-212)||(40177120-40177239)
chr5 (18-180)||(17913744-17913907)
chr5 (18-61)||(1395907-1395950)
chr5 (18-61)||(2399210-2399253)
chr5 (18-61)||(5479115-5479158)
chr5 (18-61)||(6940768-6940811)
chr5 (18-61)||(10729712-10729755)
chr5 (18-61)||(14141377-14141420)
chr5 (18-61)||(16526577-16526620)
chr5 (18-61)||(17373434-17373477)
chr5 (18-61)||(20874604-20874647)
chr5 (18-61)||(24223434-24223477)
chr5 (18-61)||(27647845-27647888)
chr5 (18-61)||(33570578-33570621)
chr5 (18-61)||(34107608-34107651)
chr5 (18-61)||(34110566-34110609)
chr5 (18-61)||(38247135-38247178)
chr5 (18-61)||(40177033-40177076)
[»] chr4 (39 HSPs)
chr4 (18-212)||(16917919-16918114)
chr4 (18-212)||(52434627-52434822)
chr4 (18-212)||(30824953-30825148)
chr4 (18-212)||(53143293-53143488)
chr4 (18-212)||(12090490-12090686)
chr4 (18-212)||(37651669-37651864)
chr4 (18-212)||(31966000-31966195)
chr4 (19-212)||(16904983-16905177)
chr4 (18-212)||(46256037-46256232)
chr4 (18-212)||(33139502-33139697)
chr4 (18-212)||(44376110-44376305)
chr4 (18-212)||(45977021-45977216)
chr4 (19-212)||(35760585-35760779)
chr4 (18-212)||(31628518-31628713)
chr4 (18-212)||(41387129-41387324)
chr4 (18-194)||(45782478-45782655)
chr4 (18-212)||(37590835-37591030)
chr4 (18-212)||(48118565-48118757)
chr4 (18-212)||(52098221-52098417)
chr4 (18-212)||(39058388-39058583)
chr4 (26-212)||(47142831-47143018)
chr4 (18-210)||(54624960-54625146)
chr4 (18-181)||(50229768-50229933)
chr4 (149-203)||(50229712-50229766)
chr4 (18-61)||(12090730-12090773)
chr4 (18-61)||(16905218-16905261)
chr4 (18-61)||(16918158-16918201)
chr4 (18-61)||(30825192-30825235)
chr4 (18-61)||(31966239-31966282)
chr4 (89-136)||(34684603-34684650)
chr4 (18-61)||(39058622-39058665)
chr4 (18-61)||(45977264-45977307)
chr4 (18-61)||(47143070-47143113)
chr4 (18-61)||(48118802-48118845)
chr4 (18-61)||(52098460-52098503)
chr4 (18-61)||(52434540-52434583)
chr4 (18-61)||(53143534-53143577)
chr4 (18-61)||(54624879-54624922)
chr4 (18-58)||(50229979-50230019)
[»] chr3 (39 HSPs)
chr3 (18-212)||(3898425-3898620)
chr3 (18-212)||(12264203-12264398)
chr3 (18-212)||(38653958-38654153)
chr3 (18-212)||(43363642-43363837)
chr3 (18-212)||(49672565-49672760)
chr3 (18-212)||(1941751-1941946)
chr3 (18-212)||(21098307-21098502)
chr3 (18-212)||(34121358-34121553)
chr3 (18-212)||(49506380-49506575)
chr3 (18-207)||(54073030-54073220)
chr3 (18-212)||(4584465-4584660)
chr3 (18-212)||(20671252-20671447)
chr3 (18-212)||(26948801-26948996)
chr3 (18-212)||(36076485-36076680)
chr3 (18-210)||(31488414-31488607)
chr3 (18-212)||(39146443-39146638)
chr3 (18-212)||(45557915-45558110)
chr3 (18-201)||(24119210-24119394)
chr3 (18-212)||(49478211-49478406)
chr3 (18-212)||(55041614-55041815)
chr3 (60-212)||(40014684-40014837)
chr3 (89-211)||(26051334-26051457)
chr3 (18-86)||(26052236-26052304)
chr3 (141-212)||(6460199-6460269)
chr3 (18-61)||(1941990-1942033)
chr3 (18-61)||(3898338-3898381)
chr3 (18-61)||(12264115-12264158)
chr3 (18-61)||(20671166-20671209)
chr3 (18-61)||(21098219-21098262)
chr3 (18-61)||(26052349-26052392)
chr3 (18-61)||(26948689-26948732)
chr3 (18-61)||(31488329-31488372)
chr3 (18-61)||(34121271-34121314)
chr3 (18-61)||(38654198-38654241)
chr3 (18-61)||(43363881-43363924)
chr3 (18-61)||(49478124-49478167)
chr3 (18-61)||(49672478-49672521)
chr3 (18-61)||(55041858-55041901)
chr3 (18-59)||(36076723-36076764)
[»] chr2 (27 HSPs)
chr2 (18-212)||(41663240-41663435)
chr2 (18-212)||(41664513-41664708)
chr2 (18-212)||(6120555-6120750)
chr2 (18-212)||(18351554-18351749)
chr2 (18-212)||(44902085-44902279)
chr2 (18-212)||(20544828-20545023)
chr2 (26-212)||(19596394-19596581)
chr2 (18-212)||(31424012-31424207)
chr2 (18-212)||(42441963-42442162)
chr2 (18-212)||(8700264-8700459)
chr2 (18-212)||(36279485-36279680)
chr2 (18-210)||(26231292-26231485)
chr2 (18-210)||(34007742-34007935)
chr2 (18-212)||(42055202-42055395)
chr2 (18-212)||(999262-999457)
chr2 (28-202)||(16214837-16215012)
chr2 (83-212)||(27944827-27944956)
chr2 (89-212)||(692233-692356)
chr2 (18-61)||(19596634-19596677)
chr2 (18-61)||(6120467-6120510)
chr2 (18-61)||(16214741-16214784)
chr2 (18-61)||(18351467-18351510)
chr2 (18-61)||(26231527-26231570)
chr2 (18-61)||(31423924-31423967)
chr2 (18-61)||(34007980-34008023)
chr2 (18-61)||(41663152-41663195)
chr2 (18-61)||(42441876-42441919)
[»] chr1 (35 HSPs)
chr1 (18-212)||(4266384-4266579)
chr1 (18-212)||(34888717-34888912)
chr1 (18-212)||(38913778-38913973)
chr1 (18-212)||(50151063-50151258)
chr1 (18-212)||(2951397-2951592)
chr1 (32-212)||(1231813-1231994)
chr1 (18-210)||(7333947-7334140)
chr1 (18-212)||(9216034-9216229)
chr1 (18-212)||(23482738-23482933)
chr1 (26-212)||(35614078-35614265)
chr1 (18-212)||(18706540-18706734)
chr1 (18-212)||(38444634-38444829)
chr1 (18-203)||(39727983-39728169)
chr1 (26-204)||(35614827-35615005)
chr1 (18-212)||(52687145-52687339)
chr1 (83-212)||(50326070-50326199)
chr1 (18-212)||(18855264-18855458)
chr1 (88-212)||(31018231-31018355)
chr1 (26-200)||(19764593-19764768)
chr1 (18-152)||(19768467-19768602)
chr1 (18-148)||(2590338-2590468)
chr1 (126-210)||(5061335-5061419)
chr1 (149-212)||(29942153-29942216)
chr1 (18-61)||(1231725-1231768)
chr1 (18-61)||(2951636-2951679)
chr1 (18-61)||(4266297-4266340)
chr1 (18-61)||(18706773-18706816)
chr1 (18-61)||(19764814-19764857)
chr1 (18-61)||(19768382-19768425)
chr1 (18-61)||(23482972-23483015)
chr1 (18-61)||(35613984-35614027)
chr1 (18-61)||(35614734-35614777)
chr1 (18-61)||(38914017-38914060)
chr1 (18-61)||(52036310-52036353)
chr1 (18-58)||(7333863-7333903)
[»] scaffold0022 (2 HSPs)
scaffold0022 (18-212)||(149081-149276)
scaffold0022 (18-61)||(149318-149361)
[»] scaffold0173 (1 HSPs)
scaffold0173 (18-209)||(19350-19542)
[»] scaffold0836 (1 HSPs)
scaffold0836 (91-211)||(5310-5430)
[»] scaffold0515 (1 HSPs)
scaffold0515 (91-212)||(6092-6213)
[»] scaffold0306 (1 HSPs)
scaffold0306 (91-212)||(6102-6223)


Alignment Details
Target: scaffold0031 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 46277 - 46472
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  46277 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 46376  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46377 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 46472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 176; Significance: 6e-95; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 15961135 - 15961330
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  15961135 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 15961234  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15961235 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 15961330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 18997703 - 18997898
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  18997703 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 18997802  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18997803 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 18997898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 30474110 - 30473915
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  30474110 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 30474011  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30474010 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 30473915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 44832412 - 44832217
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  44832412 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 44832313  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44832312 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 44832217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 6299246 - 6299051
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  6299246 aatataatattgacatataattttaacaaaggaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 6299147  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6299146 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 6299051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 10477940 - 10478135
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  10477940 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 10478039  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10478040 aattccaacatctgcatatatttgtgaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 10478135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 32111087 - 32110892
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  32111087 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 32110988  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32110987 aattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 32110892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 996041 - 995846
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||     
T  996041 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttttggtgaataagcgtggtgtctgaggttcg 995942  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  995941 aattccaacatatgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 995846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 18175384 - 18175579
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||| |||||||||||| ||||||||||||||||     
T  18175384 aatataatattgacatataattttaacaaaagaatgaagtaacacacgtttgataataattaatatttttttggtgaataagtgtggtgtctgaggttcg 18175483  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18175484 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 18175579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 39257446 - 39257641
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||    
T  39257446 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 39257545  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39257546 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 39257641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 40026803 - 40026998
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||    
T  40026803 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 40026902  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40026903 aattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 40026998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 11725193 - 11725388
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  11725193 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 11725292  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11725293 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 11725388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 28274440 - 28274244
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||||||     
T  28274440 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcg 28274341  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgat 213  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  28274340 aattccaacatctgcgtatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctacaatgtatatgat 28274244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 26 - 212
Target Start/End: Complemental strand, 35122540 - 35122353
Alignment:
Q  26 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaa 124  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||| ||| ||||||||    
T  35122540 attgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattccaa 35122441  T
Q  125 catctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35122440 catctgcatatattttggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 35122353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 18210850 - 18210656
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||    
T  18210850 aatataacattgacatataactttaacaaaagaaggaaataacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 18210751  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 211  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18210750 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatctacaatgtatatg 18210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 28582859 - 28583053
Alignment:
Q  19 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||| |    
T  28582859 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 28582958  T
Q  118 attccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  28582959 attccaacatctgcatatatttgagaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatga 28583053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 18841907 - 18842102
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||  |||||||||| |||||||||||| |||     
T  18841907 aatataacattgacatataattttaacaaaagaatgaagtaacatacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcg 18842006  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  18842007 aattccaacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatga 18842102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 210
Target Start/End: Original strand, 44836920 - 44837105
Alignment:
Q  26 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaa 124  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  44836920 attgagatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaa 44837019  T
Q  125 catctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 210  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  44837020 catctgcatatatttaggaccacatattttattctctttgatatgtattgagatttatttttgtctactacatctacaatgtatat 44837105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 18568868 - 18569063
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttgg-tgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  | |||||||| ||||||| ||||||||     
T  18568868 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtttgaggttcg 18568967  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||    
T  18568968 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatga 18569063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 24408879 - 24409074
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||| ||||     
T  24408879 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgatgttcg 24408978  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  24408979 aattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattaagatttgtttttatctactacatctacaatgtatatga 24409074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 19240666 - 19240843
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttg-gtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||   ||||||||| ||||||||||||||||     
T  19240666 aatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgaggttcg 19240765  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19240766 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 19240843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 19313850 - 19314027
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttg-gtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||   ||||||||| ||||||||||||||||     
T  19313850 aatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgaggttcg 19313949  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19313950 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 19314027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 19412834 - 19413022
Alignment:
Q  18 aatataatattgacatataattttaacaaaa-gaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttc 115  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||  |||||||||  ||||||||||||||||    
T  19412834 aatataacattgacatataattttaacaaaaagaatgaagtaacacacgatggataaaaattaatatttttaaggtgaataactgtggtgtctgaggttc 19412933  T
Q  116 aaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 204  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19412934 gaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 19413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 11142464 - 11142666
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaa------taatatttttt-ggtgaataagcgtggtgtctga 110  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||  |||||||||| |||||||||||    
T  11142464 aatataacactgacatataattttaacaaaagaatgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtgtctga 11142563  T
Q  111 ggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 210  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11142564 ggttcgaattccaacatctgcatatatttgggagcacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 11142663  T
Q  211 gat 213  Q
    |||    
T  11142664 gat 11142666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 50 - 212
Target Start/End: Original strand, 39997726 - 39997889
Alignment:
Q  50 aatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccaca 148  Q
    ||||||||||||||||||||||||||| |||||||||   |||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  39997726 aatgaagtaacacacgattgataaaaattaatattttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccaca 39997825  T
Q  149 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  39997826 tatttcattctctttgatatacattgagatttgtttttgtctactacatctacaatgtatatga 39997889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 24004953 - 24004779
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  24004953 aatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 24004854  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtcta 191  Q
    |||| |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  24004853 aatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtcta 24004779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 23353803 - 23353688
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| | ||||||||||||||     
T  23353803 aatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaaggtgaataagtggggtgtctgaggttcg 23353704  T
Q  117 aattccaacatctgca 132  Q
    ||||||||||||||||    
T  23353703 aattccaacatctgca 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 25875525 - 25875322
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgt--------------g 102  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||                   
T  25875525 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgttttattctctttaat 25875426  T
Q  103 gtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctaca 202  Q
     |||||||||||| ||||||| ||||||||||      ||| ||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||     
T  25875425 atgtctgaggttcgaattccagcatctgcata-----gggagcacatgttttattctctttaatatgcattgagatttgtttttgtctactatatctacg 25875331  T
Q  203 atgtatatg 211  Q
    |||||||||    
T  25875330 atgtatatg 25875322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 18481986 - 18481929
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaa 75  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18481986 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaa 18481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 39997665 - 39997708
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| |||||||||||||||| |||||||||||||||||||    
T  39997665 aatataacattgacatataatttttacaaaagaatgaagtaaca 39997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 6299333 - 6299290
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6299333 aatataacattaacatataatttttacaaaagaatgaagtaaca 6299290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 10477853 - 10477896
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10477853 aatataacattaacatataatttttacaaaagaatgaagtaaca 10477896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 11142381 - 11142424
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  11142381 aatataacattaacatataatttttacaaaagaatgaagtaaca 11142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 11725106 - 11725149
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  11725106 aatataacattaacatataatttttacaaaagaatgaagtaaca 11725149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 18175297 - 18175340
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18175297 aatataacattaacatataatttttacaaaagaatgaagtaaca 18175340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 18997616 - 18997659
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18997616 aatataacattaacatataatttttacaaaagaatgaagtaaca 18997659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19240580 - 19240623
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19240580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19240623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19313764 - 19313807
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19313764 aatataacattaacatataatttttacaaaagaatgaagtaaca 19313807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19412752 - 19412795
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19412752 aatataacattaacatataatttttacaaaagaatgaagtaaca 19412795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 23353889 - 23353846
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  23353889 aatataacattaacatataatttttacaaaagaatgaagtaaca 23353846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 24408795 - 24408838
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  24408795 aatataacattaacatataatttttacaaaagaatgaagtaaca 24408838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 30474196 - 30474153
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  30474196 aatataacattaacatataatttttacaaaagaatgaagtaaca 30474153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 32111174 - 32111131
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  32111174 aatataacattaacatataatttttacaaaagaatgaagtaaca 32111131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 35122628 - 35122585
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35122628 aatataacattaacatataatttttacaaaagaatgaagtaaca 35122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 39997580 - 39997623
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  39997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 39997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 44832500 - 44832457
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  44832500 aatataacattaacatataatttttacaaaagaatgaagtaaca 44832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 44836824 - 44836867
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  44836824 aatataacattaacatataatttttacaaaagaatgaagtaaca 44836867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 18210935 - 18210893
Alignment:
Q  19 atataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  18210935 atataacattaacatataatttttacaaaagaatgaagtaaca 18210893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 3840867 - 3840672
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  3840867 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 3840768  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3840767 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 3840672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 21804798 - 21804603
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  21804798 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 21804699  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21804698 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 21804603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 38163565 - 38163370
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  38163565 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 38163466  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38163465 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 38163370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 42242380 - 42242185
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  42242380 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 42242281  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42242280 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 42242185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 27138754 - 27138559
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  27138754 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 27138655  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27138654 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctagaatgtatatga 27138559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 33917173 - 33916978
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  33917173 aatataatattgacatataattttaacaaaagaatgaaataacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 33917074  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33917073 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 33916978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 31373459 - 31373654
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  31373459 aatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 31373558  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31373559 aatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatga 31373654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 17178464 - 17178268
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt--ggtgaataagcgtggtgtctgaggttc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||||| ||||||||||||||||    
T  17178464 aatataatattgacatataattttaacaaaagaatgaagtaacacccgattgataaaaattaatattttttttggtgaataagtgtggtgtctgaggttc 17178365  T
Q  116 aaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17178364 gaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgaattgagatttgtttttgtctactatatctacaatgtatatga 17178268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 21341826 - 21342021
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  21341826 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 21341925  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  21341926 aattccaacatctgcatatatttgagactacatatttcattctctttgatatgcattgagatttatttttgtctattatatctacaatgtatatga 21342021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 21669984 - 21670179
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  21669984 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 21670083  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21670084 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 21670179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 24924082 - 24924277
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||| |||||||||||||||||    
T  24924082 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaatttaatatttttaaggtgaataagtgtggtgtctgaggttca 24924181  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24924182 aattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 24924277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 16376771 - 16376576
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  16376771 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 16376672  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16376671 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 16376576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 21656631 - 21656826
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  21656631 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 21656730  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  21656731 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctacttcatctacagtgtatatga 21656826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 43933770 - 43933575
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  43933770 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 43933671  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  43933670 aattccaacatctgcatatatttgggaccacatattttattctcttttatatgcattgagatttttttttgtctactacatctacaatgtatatga 43933575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 15109891 - 15109697
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttgg-tgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||  | |||||||| ||||||||||||||||     
T  15109891 aatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatacttttaagatgaataagtgtggtgtctgaggttcg 15109792  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 211  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15109791 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 15109697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 40968894 - 40969089
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  40968894 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 40968993  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  40968994 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttgtgtctactacatctacaatgtatatga 40969089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 13786173 - 13786368
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||| |||||||||| || ||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  13786173 aatataacattgacatataattttaacaaaaaaatgaagtaagacgcgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 13786272  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13786273 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 13786368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 27903643 - 27903448
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||  |||||||||| ||||||| ||||||||     
T  27903643 aatataacattgacatagaattttaacaaaagaatgaagtaagacacgattggtaaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcg 27903544  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  27903543 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatga 27903448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 21753718 - 21753524
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||| ||||||     
T  21753718 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctaaggttcg 21753619  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 211  Q
    ||||  |||||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21753618 aattttaacatctgcatatatttgagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 50 - 212
Target Start/End: Complemental strand, 39030446 - 39030283
Alignment:
Q  50 aatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccaca 148  Q
    |||||||||| |||||||||||||||| ||||||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  39030446 aatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 39030347  T
Q  149 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    | ||| ||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  39030346 tgttttattctctttgatatgcattgaaatttgtttttgtctactacatctacaatatatatga 39030283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 31096703 - 31096748
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacaca 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31096703 aatataatattgacatataattttaacaaaagaatgaagtaacaca 31096748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 15109973 - 15109930
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  15109973 aatataatattaacatataatttttacaaaagaatgaagtaaca 15109930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 3840955 - 3840912
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  3840955 aatataacattaacatataatttttacaaaagaatgaagtaaca 3840912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 16376855 - 16376812
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||    
T  16376855 aatataacattgacatataatttttacaaaataatgaagtaaca 16376812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 17178551 - 17178508
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17178551 aatataacattaacatataatttttacaaaagaatgaagtaaca 17178508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 21341737 - 21341780
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21341737 aatataacattaacatataatttttacaaaagaatgaagtaaca 21341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 21656547 - 21656590
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21656547 aatataacattaacatataatttttacaaaagaatgaagtaaca 21656590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 21669895 - 21669938
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21669895 aatataacattaacatataatttttacaaaagaatgaagtaaca 21669938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 21804885 - 21804842
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21804885 aatataacattaacatataatttttacaaaagaatgaagtaaca 21804842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 27138841 - 27138798
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27138841 aatataacattaacatataatttttacaaaagaatgaagtaaca 27138798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 31373370 - 31373413
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31373370 aatataacattaacatataatttttacaaaagaatgaagtaaca 31373413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 33917260 - 33917217
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33917260 aatataacattaacatataatttttacaaaagaatgaagtaaca 33917217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 42242467 - 42242424
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  42242467 aatataacattaacatataatttttacaaaagaatgaagtaaca 42242424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 43933856 - 43933815
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaa 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  43933856 aatataacattaacatataatttttacaaaagaatgaagtaa 43933815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 24924001 - 24924041
Alignment:
Q  21 ataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    |||| ||| |||||||||||| |||||||||||||||||||    
T  24924001 ataacattaacatataatttttacaaaagaatgaagtaaca 24924041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 176; Significance: 6e-95; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 12597491 - 12597296
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  12597491 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 12597392  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12597391 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 12597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 19997668 - 19997863
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  19997668 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 19997767  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19997768 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 19997863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 33645945 - 33646140
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  33645945 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 33646044  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33646045 aattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 33646140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 28099823 - 28099628
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  28099823 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 28099724  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28099723 aattccaacatcagcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatga 28099628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 2266771 - 2266974
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtg--------gtgtct 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||        ||||||    
T  2266771 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtcgtggtgtct 2266870  T
Q  109 gaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtat 208  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2266871 gaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtat 2266970  T
Q  209 atga 212  Q
    ||||    
T  2266971 atga 2266974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 10584954 - 10584759
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| || |||||||||||||     
T  10584954 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgaggttcg 10584855  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  10584854 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatga 10584759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 17202435 - 17202630
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  17202435 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 17202534  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  17202535 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgtgatttgtatttgtctactacatctacaatgtatatga 17202630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 13533771 - 13533965
Alignment:
Q  19 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||| |    
T  13533771 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 13533870  T
Q  118 attccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  13533871 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatga 13533965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 2005431 - 2005626
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  2005431 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 2005530  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  2005531 aattccaacatctgcatatatttaagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactgcatctacaatgtatatga 2005626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 15044725 - 15044920
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  15044725 aatataacattgacatataattttaacaaaagaatgaagtaaaacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 15044824  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  15044825 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgaaatttatttttgtctactacatctacaatgtatatga 15044920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 3592896 - 3593091
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  3592896 aatataacattgagatataattttaacaaaagaatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 3592995  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3592996 aattccaacatctgaatatatttgggatcacatatttcattctcttggatatgcattgagatttgtttttgtctactacatctacaatgtatatga 3593091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 17594819 - 17594979
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaat-aatatttttt-ggtgaataagcgtggtgtctgaggttc 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||  |||||||||| ||||||||||| |||     
T  17594819 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaatttaatatttttaaggtgaataagtgtggtgtctgaagttt 17594918  T
Q  116 aaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgag 176  Q
     |||| |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  17594919 gaatttcaacatctccatatatttgggaccacatatttcattttctttgatatgcattgag 17594979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 8539603 - 8539725
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  8539603 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 8539702  T
Q  117 aattccaacatctgcatatattt 139  Q
    |||||||||||||||||||||||    
T  8539703 aattccaacatctgcatatattt 8539725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 25448752 - 25448874
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatat-tttttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||     
T  25448752 aatataatattgacatataattttaacaaaaaaatgaagtaacacacgattgataaaaattaatatatttttggtgaataagcgtggtgtctgagtttcg 25448851  T
Q  117 aattccaacatctgcatatattt 139  Q
    ||||||||||||| |||||||||    
T  25448852 aattccaacatctacatatattt 25448874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 1405688 - 1405594
Alignment:
Q  118 attccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  1405688 attccaacatctgcatatatttgggatcacatatttcattctctttaatatacattgagatttgtttttatctactacatctacaatgtatatga 1405594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 33035523 - 33035626
Alignment:
Q  104 tgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 203  Q
    |||||||| ||| ||||||| |||||||||||||||  |||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  33035523 tgtctgagattcgaattccagcatctgcatatatttgagaccacatgttttattctctttgacatgcattgagatttgtttttgtctactacatctacaa 33035622  T
Q  204 tgta 207  Q
    ||||    
T  33035623 tgta 33035626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 2266684 - 2266727
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2266684 aatataacattaacatataatttttacaaaagaatgaagtaaca 2266727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 10585039 - 10584996
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10585039 aatataacattaacatataatttttacaaaagaatgaagtaaca 10584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 12597578 - 12597535
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12597578 aatataacattaacatataatttttacaaaagaatgaagtaaca 12597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 15044639 - 15044682
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  15044639 aatataacattaacatataatttttacaaaagaatgaagtaaca 15044682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 17202348 - 17202391
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17202348 aatataacattaacatataatttttacaaaagaatgaagtaaca 17202391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 17594733 - 17594776
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17594733 aatataacattaacatataatttttacaaaagaatgaagtaaca 17594776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19997580 - 19997623
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 28099911 - 28099868
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  28099911 aatataacattaacatataatttttacaaaagaatgaagtaaca 28099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 33645858 - 33645901
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33645858 aatataacattaacatataatttttacaaaagaatgaagtaaca 33645901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 176; Significance: 6e-95; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 10729668 - 10729473
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  10729668 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttttggtgaataagcgtggtgtctgaggttcg 10729569  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10729568 aattccaacatctgcatatatttgggaccacatatttcattctcttggatatgcattgagatttgtttttgtctactatatctacaatgtatatga 10729473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 20874691 - 20874886
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  20874691 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 20874790  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20874791 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 20874886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 34107564 - 34107369
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  34107564 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 34107465  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34107464 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 34107369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 34110655 - 34110850
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  34110655 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 34110754  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34110755 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 34110850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 38247091 - 38246896
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  38247091 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 38246992  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38246991 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 38246896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 16526532 - 16526337
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  16526532 aatataatattgacatataattttaacaaaagaacgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 16526433  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16526432 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 16526337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 17373390 - 17373200
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  17373390 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 17373291  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgta 207  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17373290 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgta 17373200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 33570533 - 33570342
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  33570533 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 33570434  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtat 208  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33570433 aattccaacatctgcatatatttgggaccacatatttcattctctttggtatgcattgagatttgtttttgtctactatatctacaatgtat 33570342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 2399166 - 2398973
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  2399166 aatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 2399069  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2399068 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 2398973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 14141333 - 14141154
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  14141333 aatataatattggcatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 14141234  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactata 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14141233 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactata 14141154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 27647933 - 27648120
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  27647933 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 27648032  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 204  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27648033 aattccaacatctgtatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 27648120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 1395992 - 1396187
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  1395992 aatataacattgacatataattttaacaaaagaatgaagtaacacacgactgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 1396091  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  1396092 aattccaacatctgcagatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctgcaatgtatatga 1396187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 5479199 - 5479394
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| || |||||||||||||     
T  5479199 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgaggttcg 5479298  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  5479299 aattccaacatctacatatatttgggatcacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatga 5479394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 20655275 - 20655080
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  20655275 aatataacattgacatataattttaacaaaagaatgaagtaagacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 20655176  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20655175 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 20655080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 29275627 - 29275817
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||| ||||||||||||||||     
T  29275627 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgaggttcg 29275726  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgta 207  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  29275727 aattccaacatctgcatatatttgggaccacatgtttcattctctttgatatgcattgaaatttgtttttgtctattacatctacaatgta 29275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 33375765 - 33375962
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  33375765 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 33375864  T
Q  117 aattccaacatctgcatatatttagg--accacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||  ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33375865 aattccaacatctgcatatatttgggacaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 33375962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 201
Target Start/End: Complemental strand, 6940729 - 6940545
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||| ||||||| ||||||||     
T  6940729 aatataacgttgacatataattttaacaaaagaatgaagtaacatacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcg 6940630  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctac 201  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6940629 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctac 6940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 26 - 212
Target Start/End: Complemental strand, 24223382 - 24223195
Alignment:
Q  26 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaa 124  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||||  |||||||||| |||||||||||||||| ||||||||    
T  24223382 attgacatatacttttaacaaaagaatgaagtaacacacgattggtaaagagtaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaa 24223283  T
Q  125 catctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||    
T  24223282 catctgcatatatttgggaccacatatttcattctctttcatatgcattgagatttgtttttgtctactacatctacgatgtatatga 24223195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 25099462 - 25099267
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  || ||||||| |||||| |||||||||     
T  25099462 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgaggttcg 25099363  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||||  |||||||| ||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  25099362 aattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatga 25099267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 25158552 - 25158357
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  || ||||||| |||||| |||||||||     
T  25158552 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgaggttcg 25158453  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||||  |||||||| ||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  25158452 aattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatga 25158357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 1394712 - 1394541
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||  |||||| ||| ||||||| ||||||||     
T  1394712 aatataacattgacatataaatttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaacaagtgtggtgtttgaggttcg 1394613  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgt 188  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1394612 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 1394541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 93 - 212
Target Start/End: Original strand, 40177120 - 40177239
Alignment:
Q  93 aataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctac 192  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40177120 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttttatatgcattgagatttgtttttgtctac 40177219  T
Q  193 tatatctacaatgtatatga 212  Q
    ||||||||||||||||||||    
T  40177220 tatatctacaatgtatatga 40177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 17913744 - 17913907
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||  |||||||||| ||||| | ||||||||     
T  17913744 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaagattaatatttttaaggtgaataagtgtggtatttgaggttcg 17913843  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagattt 180  Q
    ||||||||||||| ||||||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  17913844 aattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagattt 17913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 1395907 - 1395950
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1395907 aatataacattaacatataatttttacaaaagaatgaagtaaca 1395950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 2399253 - 2399210
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2399253 aatataacattaacatataatttttacaaaagaatgaagtaaca 2399210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 5479115 - 5479158
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  5479115 aatataacattaacatataatttttacaaaagaatgaagtaaca 5479158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 6940811 - 6940768
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6940811 aatataacattaacatataatttttacaaaagaatgaagtaaca 6940768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 10729755 - 10729712
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10729755 aatataacattaacatataatttttacaaaagaatgaagtaaca 10729712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 14141420 - 14141377
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  14141420 aatataacattaacatataatttttacaaaagaatgaagtaaca 14141377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 16526620 - 16526577
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16526620 aatataacattaacatataatttttacaaaagaatgaagtaaca 16526577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 17373477 - 17373434
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17373477 aatataacattaacatataatttttacaaaagaatgaagtaaca 17373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 20874604 - 20874647
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  20874604 aatataacattaacatataatttttacaaaagaatgaagtaaca 20874647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 24223477 - 24223434
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  24223477 aatataacattaacatataatttttacaaaagaatgaagtaaca 24223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 27647845 - 27647888
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27647845 aatataacattaacatataatttttacaaaagaatgaagtaaca 27647888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 33570621 - 33570578
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33570621 aatataacattaacatataatttttacaaaagaatgaagtaaca 33570578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 34107651 - 34107608
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34107651 aatataacattaacatataatttttacaaaagaatgaagtaaca 34107608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 34110566 - 34110609
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34110566 aatataacattaacatataatttttacaaaagaatgaagtaaca 34110609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 38247178 - 38247135
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38247178 aatataacattaacatataatttttacaaaagaatgaagtaaca 38247135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 40177033 - 40177076
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  40177033 aatataacattaacatataatttttacaaaagaatgaagtaaca 40177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 6e-95; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 16918114 - 16917919
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  16918114 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 16918015  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16918014 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 16917919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 52434627 - 52434822
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  52434627 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 52434726  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52434727 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 52434822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 30825148 - 30824953
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  30825148 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 30825049  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30825048 aattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 30824953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 53143488 - 53143293
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  53143488 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 53143389  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53143388 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatga 53143293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 12090686 - 12090490
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaaataatattttttggt-gaataagcgtggtgtctgaggttc 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  12090686 aatataatattgacatataattttaacaaaagaaatgaagtaacacacgattgataaaaattaatattttttggttgaataagcgtggtgtctgaggttc 12090587  T
Q  116 aaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
     ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12090586 gaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 12090490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 37651669 - 37651864
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||     
T  37651669 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgaggttcg 37651768  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37651769 aattccaacatctgcatatatttgagaccacatatttcattctctttcatatgcattgagatttgtttttgtctactatatctacaatgtatatga 37651864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 31966195 - 31966000
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  31966195 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 31966096  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| || || |||||||||||||||||    
T  31966095 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttatgtataataaatctacaatgtatatga 31966000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 16905177 - 16904983
Alignment:
Q  19 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| |||||||||||||||| |    
T  16905177 atataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 16905078  T
Q  118 attccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16905077 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 16904983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 46256037 - 46256232
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  46256037 aatataacattgacatataattttaacaaaagaatgaagtaagatacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcc 46256136  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  46256137 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 46256232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 33139697 - 33139502
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||  ||||||||||||||||     
T  33139697 aatataacattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataaatgtggtgtctgaggttcg 33139598  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33139597 aattccaacatctgcatatatttgggacaacatatttaattctctttgatatgcattgagatttgtttttgtctactaaatctacaatgtatatga 33139502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 44376305 - 44376110
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  44376305 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 44376206  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44376205 aattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 44376110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 45977216 - 45977021
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  45977216 aatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 45977117  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||| ||||||||||    
T  45977116 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgatatttatttttatctactacatctacgatgtatatga 45977021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 35760585 - 35760779
Alignment:
Q  19 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||  ||||||| |||||||| |    
T  35760585 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataattgtggtgtttgaggttcga 35760684  T
Q  118 attccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  35760685 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttatttttatctactatatctacaatgtatatga 35760779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 31628713 - 31628518
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttgg-tgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||| ||||||||     
T  31628713 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtatgaggttcg 31628614  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||    
T  31628613 aattccaacatctgcatatatttgagaccacatatttaattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatga 31628518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 41387129 - 41387324
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  41387129 aatataacattgacatataattttaacaaaagaatgaagtaagacacgatcgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 41387228  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||| || ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41387229 aatttcagcatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 41387324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 45782655 - 45782478
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||    
T  45782655 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 45782556  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 194  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  45782555 aattccaacatcttcatatatttaggaccacatatttcattctctttgatatatattgagatttatttttgtctacta 45782478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 37591030 - 37590835
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  37591030 aatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 37590931  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||| |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  37590930 aatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtctactacatctacaatgtatatga 37590835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 48118757 - 48118565
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||  |||||||| | ||||||| ||||||||     
T  48118757 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattggtaaaaattaatatttttaaggtgaatacgtgtggtgtttgaggttcg 48118658  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||    
T  48118657 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctac---atctacaatgtatatga 48118565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 52098417 - 52098221
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaat-aatatttttt-ggtgaataagcgtggtgtctgaggttc 115  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||  |||||||||| || |||||||| |||     
T  52098417 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatttaatatttttaaggtgaataagtgttgtgtctgaagttt 52098318  T
Q  116 aaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  52098317 gaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatttacagtgtatatga 52098221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 39058583 - 39058388
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||| ||||| ||||||||||     
T  39058583 aatataacattgacatataattttaacaaaagaatgaagtaacacatgattgataaaaattaatatttttaaggtgaataagtgtggtatctgaggttcg 39058484  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||  |||||||| ||||||||||||||||||||||||||||  ||| | ||||||||||||||||||||||||||||||||||||    
T  39058483 aattccaacatcttgatatatttgggaccacatatttcattctctttgatatatattaaaatttgtttttgtctactatatctacaatgtatatga 39058388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 26 - 212
Target Start/End: Complemental strand, 47143018 - 47142831
Alignment:
Q  26 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaa 124  Q
    ||||| ||||||||||||||||||||||||||||||||| || |||||||| ||||||||||  ||||||||||| ||||||||||||||| ||||| ||    
T  47143018 attgagatataattttaacaaaagaatgaagtaacacacaatcgataaaaattaatatttttaaggtgaataagcatggtgtctgaggttcgaattctaa 47142919  T
Q  125 catctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47142918 catctgcatatatttgagaccacatatgtcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 47142831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 54624960 - 54625146
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||| |||||||||||||      ||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  54624960 aatataacattgacatataattttaacaaa-gaatgaagtaaca------tgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 54625052  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 210  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  54625053 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacgtctacaatgtatat 54625146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 50229933 - 50229768
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaat-aatatttttt-ggtgaataagcgtggtgtctgaggttc 115  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||  |||||||||||||||    
T  50229933 aatataacattgacatataattttaacaaaagaatgaagtaacacactattgataaaaaattaatatttttaaggtgaataagtatggtgtctgaggttc 50229834  T
Q  116 aaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttg 181  Q
     ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  50229833 gaattccaacatctgcatatattttggaccacatgtttcattctctttgatatgcattgagatttg 50229768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 50229766 - 50229712
Alignment:
Q  149 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 203  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  50229766 tatttcattctctttgatatgcattgagatttttttttgtctactacatctacaa 50229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 12090773 - 12090730
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12090773 aatataacattaacatataatttttacaaaagaatgaagtaaca 12090730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 16905261 - 16905218
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16905261 aatataacattaacatataatttttacaaaagaatgaagtaaca 16905218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 16918201 - 16918158
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16918201 aatataacattaacatataatttttacaaaagaatgaagtaaca 16918158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 30825235 - 30825192
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  30825235 aatataacattaacatataatttttacaaaagaatgaagtaaca 30825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 31966282 - 31966239
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31966282 aatataacattaacatataatttttacaaaagaatgaagtaaca 31966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 34684650 - 34684603
Alignment:
Q  89 ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatata 136  Q
    |||||||||| | |||||||||||||| ||||||||| ||||||||||    
T  34684650 ggtgaataagtggggtgtctgaggttcgaattccaacctctgcatata 34684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 39058665 - 39058622
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  39058665 aatataacattaacatataatttttacaaaagaatgaagtaaca 39058622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 45977307 - 45977264
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  45977307 aatataacattaacatataatttttacaaaagaatgaagtaaca 45977264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 47143113 - 47143070
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  47143113 aatataacattaacatataatttttacaaaagaatgaagtaaca 47143070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 48118845 - 48118802
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  48118845 aatataacattaacatataatttttacaaaagaatgaagtaaca 48118802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 52098503 - 52098460
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52098503 aatataacattaacatataatttttacaaaagaatgaagtaaca 52098460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 52434540 - 52434583
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52434540 aatataacattaacatataatttttacaaaagaatgaagtaaca 52434583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 53143577 - 53143534
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  53143577 aatataacattaacatataatttttacaaaagaatgaagtaaca 53143534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 54624879 - 54624922
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  54624879 aatataacattaacatataatttttacaaaagaatgaagtaaca 54624922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 50230019 - 50229979
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagta 58  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  50230019 aatataacattaacatataatttttacaaaagaatgaagta 50229979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 6e-95; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 3898425 - 3898620
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  3898425 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttca 3898524  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3898525 aattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactatatctacaatgtatatga 3898620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 12264203 - 12264398
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  12264203 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 12264302  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12264303 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 12264398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 38654153 - 38653958
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  38654153 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 38654054  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38654053 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 38653958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 43363837 - 43363642
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  43363837 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 43363738  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43363737 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 43363642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 49672565 - 49672760
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  49672565 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 49672664  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49672665 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 49672760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 1941946 - 1941751
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||     
T  1941946 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtgatgtctgaggttcg 1941847  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1941846 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 1941751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 21098307 - 21098502
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  21098307 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 21098406  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21098407 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatga 21098502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 34121358 - 34121553
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  34121358 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 34121457  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34121458 aattccaacatctgcatatatttgggaccacgtatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 34121553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 49506575 - 49506380
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  49506575 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 49506476  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49506475 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 49506380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 54073030 - 54073220
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  54073030 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 54073129  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgta 207  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54073130 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgta 54073220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 4584660 - 4584465
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||    
T  4584660 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 4584561  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4584560 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 4584465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 20671252 - 20671447
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  20671252 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 20671351  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20671352 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 20671447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 26948801 - 26948996
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||| ||||||||||||||||     
T  26948801 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgaggttcg 26948900  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26948901 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 26948996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 36076680 - 36076485
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||| ||||     
T  36076680 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaagttcg 36076581  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  36076580 aattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatga 36076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 31488414 - 31488607
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  31488414 aatataacattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 31488513  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 210  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31488514 aattccaacatctgcatatatttgggacaacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 31488607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 39146443 - 39146638
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  39146443 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 39146542  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  39146543 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatga 39146638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 45558110 - 45557915
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  45558110 aatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 45558011  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  45558010 aatttcaacatctgcatatacttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatga 45557915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 201
Target Start/End: Original strand, 24119210 - 24119394
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||      
T  24119210 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggtttg 24119309  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctac 201  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  24119310 aattccaacatctgcatatatttgggaccatatatttcattatctttaatatgcattgagatttgtttttgtctactacatctac 24119394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 49478211 - 49478406
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  49478211 aatataacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 49478310  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||  ||||||||||| ||||    
T  49478311 aattccaacatttgcatatatttgggaccacatatttcattatctttgatatgtattgagatttgtttttatctactacgtctacaatgtaaatga 49478406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 55041815 - 55041614
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaa------taatatttttt-ggtgaataagcgtggtgtctga 110  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||       ||||||||||  |||||||||| |||||||||||    
T  55041815 aatataacattgacatataattttaacaaaagagtgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtgtctga 55041716  T
Q  111 ggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 210  Q
    ||||| ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  55041715 ggttcgaattcaaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 55041616  T
Q  211 ga 212  Q
    ||    
T  55041615 ga 55041614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 40014837 - 40014684
Alignment:
Q  60 cacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattc 158  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  40014837 cacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattc 40014738  T
Q  159 tctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  40014737 tctttgatatgcattgagatttgtttttgtttattatatctacaatgtatatga 40014684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 26051457 - 26051334
Alignment:
Q  89 ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttagg-accacatatttcattctctttgatatgcattgagatttgtttttg 187  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  26051457 ggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatatttggggaccacatatttcattctctttgatatgcattgagatttgtttttg 26051358  T
Q  188 tctactatatctacaatgtatatg 211  Q
    ||||||| ||||||||||||||||    
T  26051357 tctactacatctacaatgtatatg 26051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 26052304 - 26052236
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt 86  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26052304 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttt 26052236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 6460269 - 6460199
Alignment:
Q  141 ggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  6460269 ggaccacatattttattct-tttgatatgtattgagatttgtttttgtctactacatctacaatgtatatga 6460199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 1942033 - 1941990
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1942033 aatataacattaacatataatttttacaaaagaatgaagtaaca 1941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 3898338 - 3898381
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  3898338 aatataacattaacatataatttttacaaaagaatgaagtaaca 3898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 12264115 - 12264158
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12264115 aatataacattaacatataatttttacaaaagaatgaagtaaca 12264158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 20671166 - 20671209
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  20671166 aatataacattaacatataatttttacaaaagaatgaagtaaca 20671209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 21098219 - 21098262
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21098219 aatataacattaacatataatttttacaaaagaatgaagtaaca 21098262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 26052392 - 26052349
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26052392 aatataacattaacatataatttttacaaaagaatgaagtaaca 26052349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 26948689 - 26948732
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26948689 aatataacattaacatataatttttacaaaagaatgaagtaaca 26948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 31488329 - 31488372
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31488329 aatataacattaacatataatttttacaaaagaatgaagtaaca 31488372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 34121271 - 34121314
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34121271 aatataacattaacatataatttttacaaaagaatgaagtaaca 34121314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 38654241 - 38654198
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38654241 aatataacattaacatataatttttacaaaagaatgaagtaaca 38654198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 43363924 - 43363881
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  43363924 aatataacattaacatataatttttacaaaagaatgaagtaaca 43363881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 49478124 - 49478167
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  49478124 aatataacattaacatataatttttacaaaagaatgaagtaaca 49478167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 49672478 - 49672521
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  49672478 aatataacattaacatataatttttacaaaagaatgaagtaaca 49672521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 55041901 - 55041858
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  55041901 aatataacattaacatataatttttacaaaagaatgaagtaaca 55041858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 36076764 - 36076723
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaa 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  36076764 aatataacattaacatataatttttacaaaagaatgaagtaa 36076723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 176; Significance: 6e-95; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 41663240 - 41663435
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  41663240 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 41663339  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41663340 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 41663435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 41664513 - 41664708
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  41664513 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 41664612  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41664613 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 41664708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 6120555 - 6120750
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  6120555 aatataatattgacatatagttttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 6120654  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6120655 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 6120750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 18351554 - 18351749
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||     
T  18351554 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgaggttcg 18351653  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18351654 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 18351749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 44902085 - 44902279
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttggtgaataagcgtggtgtctgaggttcaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||| |||||||||||||||||||||||||| |    
T  44902085 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattatattttttttgtgaataagcgtggtgtctgaggttcga 44902184  T
Q  118 attccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44902185 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 44902279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 20544828 - 20545023
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||     
T  20544828 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgttttaggttcg 20544927  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20544928 aattctaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctaccatatctacaatgtatatga 20545023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 26 - 212
Target Start/End: Complemental strand, 19596581 - 19596394
Alignment:
Q  26 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaa 124  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  19596581 attgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaa 19596482  T
Q  125 catctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  19596481 catctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatga 19596394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 31424012 - 31424207
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| ||||||| ||||||||     
T  31424012 aatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcg 31424111  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31424112 aattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 31424207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 42441963 - 42442162
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  42441963 aatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 42442060  T
Q  117 aatt------ccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 210  Q
    ||||      ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42442061 aattcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 42442160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 8700264 - 8700459
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||| ||  ||||||| ||||||||     
T  8700264 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaaaaaatgtggtgtatgaggttcg 8700363  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  8700364 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatatga 8700459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 36279680 - 36279485
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||| |||||| |||     
T  36279680 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtatctgagattcg 36279581  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  36279580 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgatatttgtttttgtctactacatctacaatgtatatga 36279485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 26231485 - 26231292
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttgg-tgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  | |||||||| ||||||||||||||||     
T  26231485 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtctgaggttcg 26231386  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 210  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  26231385 aattccaacatctgaatatatttgagaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatat 26231292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 34007935 - 34007742
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||| ||||| ||||||||||||||||     
T  34007935 aatataacattgacatataattttaacaaaagaatgaagtaacacacgatttataaaaattaatatttttaaggtggataagtgtggtgtctgaggttcg 34007836  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 210  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  34007835 aattccaacatcggcatatatttgggactacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatggatat 34007742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 42055202 - 42055395
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||  || ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  42055202 aatataacattgacata--atcttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 42055299  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42055300 aattccaacatctgcatatatttgggatcacctatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 42055395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 999457 - 999262
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  999457 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 999358  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  999357 aattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactacatctacaaagtatatga 999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 16214837 - 16215012
Alignment:
Q  28 tgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaaca 126  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||||  ||||||| |||||| |||    
T  16214837 tgacatataattttaacaaaagaatgaagtaacacacgattaataaaaattaatatttttaaggtgaataagtgtggtgttagaggttcgaattcctaca 16214936  T
Q  127 tctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctaca 202  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  16214937 tttgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctaca 16215012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 83 - 212
Target Start/End: Complemental strand, 27944956 - 27944827
Alignment:
Q  83 ttttttggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgt 182  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27944956 tttttttgtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgt 27944857  T
Q  183 ttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||||||||||    
T  27944856 ttttgtctactatatctacaatgtatatga 27944827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 692356 - 692233
Alignment:
Q  89 ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgt 188  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  692356 ggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccatatatttcattctctttgatatgcattgagatttgtttttgt 692257  T
Q  189 ctactatatctacaatgtatatga 212  Q
    |||||| || ||||||||||||||    
T  692256 ctactacatttacaatgtatatga 692233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 19596677 - 19596634
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  19596677 aatataacattaacatataattttaacaaaagaatgaagtaaca 19596634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 6120467 - 6120510
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6120467 aatataacattaacatataatttttacaaaagaatgaagtaaca 6120510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 16214741 - 16214784
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16214741 aatataacattaacatataatttttacaaaagaatgaagtaaca 16214784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 18351467 - 18351510
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18351467 aatataacattaacatataatttttacaaaagaatgaagtaaca 18351510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 26231570 - 26231527
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26231570 aatataacattaacatataatttttacaaaagaatgaagtaaca 26231527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 31423924 - 31423967
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31423924 aatataacattaacatataatttttacaaaagaatgaagtaaca 31423967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 34008023 - 34007980
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34008023 aatataacattaacatataatttttacaaaagaatgaagtaaca 34007980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 41663152 - 41663195
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  41663152 aatataacattaacatataatttttacaaaagaatgaagtaaca 41663195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 42441876 - 42441919
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  42441876 aatataacattaacatataatttttacaaaagaatgaagtaaca 42441919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 6e-95; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 4266384 - 4266579
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  4266384 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 4266483  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4266484 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 4266579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 34888912 - 34888717
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  34888912 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 34888813  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34888812 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 34888717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 38913973 - 38913778
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  38913973 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 38913874  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38913873 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 38913778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 50151063 - 50151258
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  50151063 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 50151162  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50151163 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 50151258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 2951592 - 2951397
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  2951592 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 2951493  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||| ||||||||||||||    
T  2951492 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttttttttgtttattatatttacaatgtatatga 2951397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 1231813 - 1231994
Alignment:
Q  32 atataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttcaaattccaacatctg 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  1231813 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctg 1231912  T
Q  131 catatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1231913 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatttacaatgtatatga 1231994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 7333947 - 7334140
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||      
T  7333947 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttatggtgaataagtgtggtgtctgaggtttg 7334046  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 210  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||    
T  7334047 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctaccatctatat 7334140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 9216034 - 9216229
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||| |||||| ||||||||||||||||     
T  9216034 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtaaataagtgtggtgtctgaggttcg 9216133  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9216134 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactatatctacaatgtatatga 9216229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 23482933 - 23482738
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||||||     
T  23482933 aatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcg 23482834  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  23482833 aattccaacatctgcatatatttgggaccacatatttcatgctctttgatatgcattgagatttgtatttgtctactacatctacaatgtatatga 23482738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 26 - 212
Target Start/End: Original strand, 35614078 - 35614265
Alignment:
Q  26 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||| | |||| ||||||||    
T  35614078 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtcttaagttcgaattccaa 35614177  T
Q  125 catctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  35614178 catctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatttacaatgtatatga 35614265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 18706734 - 18706540
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||||||     
T  18706734 aatataacgttgacatataattttaacaaaagaatgaagttacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcg 18706635  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  18706634 aattccaacatctgcatatattt-ggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatga 18706540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 38444634 - 38444829
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||  |||||||||| ||||||||||| ||||     
T  38444634 aatataacattgacatataattttatcaaaagaatgaagtaacacattattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaagttcg 38444733  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38444734 aatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatga 38444829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 39727983 - 39728169
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  39727983 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 39728082  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 203  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39728083 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 39728169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 26 - 204
Target Start/End: Original strand, 35614827 - 35615005
Alignment:
Q  26 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttggtgaataagcgtggtgtctgaggttcaaattccaac 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||| |||||| |||||||||||||||| |||||||||    
T  35614827 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatattttaaggtaaataagtgtggtgtctgaggttcgaattccaac 35614926  T
Q  126 atctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 204  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||    
T  35614927 atctgcatatatttgagaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatttacaat 35615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 52687339 - 52687145
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||||||     
T  52687339 aatataacattgacatataattttaataaaaaaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgt-tgaggttcg 52687241  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
     |||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  52687240 gattccaacatctgcatatatttgggaccacatatttcattctctttcataggcattgagatttgtttttgtatactacatctacaatgtatatga 52687145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 50326070 - 50326199
Alignment:
Q  83 ttttttggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgt 182  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50326070 ttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgt 50326169  T
Q  183 ttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||||||||||    
T  50326170 ttttgtctactatatctacaatgtatatga 50326199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 18855458 - 18855264
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  18855458 aatataacattgacatataattttaacaaaagaatgaagtaatacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 18855359  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    |||| |||||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||||||  ||||||||||  |||||||||||||||||    
T  18855358 aatttcaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttg-atttgtctactgcatctacaatgtatatga 18855264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 31018355 - 31018231
Alignment:
Q  88 tggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttg 187  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31018355 tggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttg 31018256  T
Q  188 tctactatatctacaatgtatatga 212  Q
    |||||||||||||||||||||||||    
T  31018255 tctactatatctacaatgtatatga 31018231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 26 - 200
Target Start/End: Complemental strand, 19764768 - 19764593
Alignment:
Q  26 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaa 124  Q
    |||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||||||||||||| ||||| ||    
T  19764768 attgacatgtaattttaacaaaataatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattcaaa 19764669  T
Q  125 catctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatcta 200  Q
    ||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| |||||    
T  19764668 catttgcatatatttgggaccacatatttcattctttttaatatgcattgagatttgtttttgtatactacatcta 19764593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 19768467 - 19768602
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||||||     
T  19768467 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtctgaggttcg 19768566  T
Q  117 aattccaacatctgcatatatttaggaccacatatt 152  Q
    || | |||||||| ||| ||||| | ||||||||||    
T  19768567 aaattcaacatctacatgtatttggaaccacatatt 19768602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 2590338 - 2590468
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| |||||||||||||||      
T  2590338 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggtt-g 2590436  T
Q  117 aattccaacatctgcatatatttaggaccaca 148  Q
    ||||| ||||||||||||||||| | ||||||    
T  2590437 aattcgaacatctgcatatatttggaaccaca 2590468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 5061335 - 5061419
Alignment:
Q  126 atctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 210  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5061335 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 5061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 29942153 - 29942216
Alignment:
Q  149 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29942153 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 29942216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 1231725 - 1231768
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1231725 aatataacattaacatataatttttacaaaagaatgaagtaaca 1231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 2951679 - 2951636
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2951679 aatataacattaacatataatttttacaaaagaatgaagtaaca 2951636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 4266297 - 4266340
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  4266297 aatataacattaacatataatttttacaaaagaatgaagtaaca 4266340  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 18706816 - 18706773
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18706816 aatataacattaacatataatttttacaaaagaatgaagtaaca 18706773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 19764857 - 19764814
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19764857 aatataacattaacatataatttttacaaaagaatgaagtaaca 19764814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19768382 - 19768425
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19768382 aatataacattaacatataatttttacaaaagaatgaagtaaca 19768425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 23483015 - 23482972
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  23483015 aatataacattaacatataatttttacaaaagaatgaagtaaca 23482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 35613984 - 35614027
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35613984 aatataaaattaacatataatttttacaaaagaatgaagtaaca 35614027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 35614734 - 35614777
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35614734 aatataacattaacatataatttttacaaaagaatgaagtaaca 35614777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 38914060 - 38914017
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38914060 aatataacattaacatataatttttacaaaagaatgaagtaaca 38914017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 52036353 - 52036310
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52036353 aatataacattaacatataatttttacaaaagaatgaagtaaca 52036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 7333863 - 7333903
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagta 58  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  7333863 aatataacattaacatataatttttacaaaagaatgaagta 7333903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 144; Significance: 7e-76; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 149276 - 149081
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| || |||| ||| ||||     
T  149276 aatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgttgtgtttgatgttcg 149177  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  149176 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatttatatga 149081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 149361 - 149318
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  149361 aatataacattaacatataatttttacaaaagaatgaagtaaca 149318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 19350 - 19542
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  19350 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 19449  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtata 209  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  19450 aattccaacatctgcatatatttgggaccacatatttaattatctttaatatgcattgagatttgtttttgtctactacatctacaatgtata 19542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 91 - 211
Target Start/End: Complemental strand, 5430 - 5310
Alignment:
Q  91 tgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 190  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 5331  T
Q  191 actatatctacaatgtatatg 211  Q
    | |||||||||||||||||||    
T  5330 attatatctacaatgtatatg 5310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 6213 - 6092
Alignment:
Q  91 tgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 190  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6213 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6114  T
Q  191 actatatctacaatgtatatga 212  Q
    || | |||||||||||||||||    
T  6113 acaacatctacaatgtatatga 6092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 6223 - 6102
Alignment:
Q  91 tgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 190  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6223 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6124  T
Q  191 actatatctacaatgtatatga 212  Q
    || | |||||||||||||||||    
T  6123 acaacatctacaatgtatatga 6102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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