View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8902A_low_338 (Length: 227)
Name: NF8902A_low_338
Description: NF8902A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8902A_low_338 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 37303591 - 37303370
Alignment:
| Q |
1 |
tgtgtacactgttccatcgttagaaactacaaccgcgttgaccgcatcttcgtgtgctttgagggattctaagcaacgaagatcagagattctccatatt |
100 |
Q |
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| T |
37303591 |
tgtgtacactgttccatcgttagaaactgcaaccgcgttgaccgcatcttcgtgtgctttgagggattctaagcaacgaagatcagagattctccatatt |
37303492 |
T |
|
| Q |
101 |
ttgagtgttttgtcccatgaaaccgagtagataacgccgttggagactgtgaggtcggtgacagcgtcggcatgttcaatccatagacgttttacgtggc |
200 |
Q |
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||||||||||||||||||||||| ||||||||||||||||| || |||| ||||||||||| |||||||||||||||||||| |||||||||||||||| |
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| T |
37303491 |
ttgagtgttttgtcccatgaaacggagtagataacgccgtttgaaactgcaaggtcggtgacggcgtcggcatgttcaatccagagacgttttacgtggc |
37303392 |
T |
|
| Q |
201 |
gacggatgttgatgtagttact |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
37303391 |
gacggatgttgatgtagttact |
37303370 |
T |
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