View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8902A_low_369 (Length: 208)
Name: NF8902A_low_369
Description: NF8902A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8902A_low_369 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 47285960 - 47286167
Alignment:
| Q |
1 |
gaactgaaaattaccggtgttaaaacaggttgacatccgttttcccatccagctgtacctgatccagcgccgttaattataataacatcgccgttaggta |
100 |
Q |
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| T |
47285960 |
gaacggaaaattaccggtgttaaaacaggttgacgtccgttttcccatccagctgtacctgatccagcgccgttaattataataacatcgccgttaggta |
47286059 |
T |
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| Q |
101 |
gaattaacatgtctcccattactcttgccattggcatattctcaataatccaactaggattcgaatccgttactttgagaaatccacatgttttaagtgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47286060 |
gaattaacatgtctcccattactcttgccattggcatattctcaataatccaactaggattcgaatccgttactttgagaaatccacatgttttaagtgc |
47286159 |
T |
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| Q |
201 |
tggcatga |
208 |
Q |
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|||||||| |
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| T |
47286160 |
tggcatga |
47286167 |
T |
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