View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8902A_low_45 (Length: 407)

Name: NF8902A_low_45
Description: NF8902A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8902A_low_45
NF8902A_low_45
[»] chr5 (40 HSPs)
chr5 (28-407)||(19438072-19438451)
chr5 (292-342)||(10022625-10022675)
chr5 (285-342)||(6326313-6326370)
chr5 (285-342)||(12927640-12927697)
chr5 (285-332)||(7175045-7175092)
chr5 (285-342)||(3966489-3966546)
chr5 (309-342)||(6471905-6471938)
chr5 (273-342)||(12264845-12264914)
chr5 (305-342)||(18421857-18421894)
chr5 (285-342)||(27144449-27144506)
chr5 (309-342)||(28588690-28588723)
chr5 (281-342)||(31084305-31084366)
chr5 (310-342)||(24273046-24273078)
chr5 (310-342)||(24389136-24389168)
chr5 (298-342)||(27932234-27932278)
chr5 (310-341)||(21194222-21194253)
chr5 (299-342)||(23016005-23016048)
chr5 (152-215)||(35095869-35095932)
chr5 (153-240)||(37063161-37063248)
chr5 (304-342)||(17593738-17593776)
chr5 (304-342)||(30502404-30502442)
chr5 (304-342)||(30542747-30542785)
chr5 (312-342)||(41091273-41091303)
chr5 (285-342)||(5467994-5468051)
chr5 (309-342)||(6247632-6247665)
chr5 (281-342)||(11685921-11685982)
chr5 (285-342)||(14674255-14674312)
chr5 (309-342)||(21191072-21191105)
chr5 (309-342)||(21576761-21576794)
chr5 (285-342)||(30098312-30098369)
chr5 (309-342)||(35017047-35017080)
chr5 (285-342)||(39698527-39698584)
chr5 (285-342)||(42893346-42893403)
chr5 (285-342)||(43001786-43001843)
chr5 (281-333)||(2436904-2436956)
chr5 (172-252)||(3951502-3951581)
chr5 (285-341)||(19168838-19168894)
chr5 (310-342)||(21194139-21194171)
chr5 (170-214)||(29281087-29281131)
chr5 (309-341)||(31264448-31264480)
[»] chr7 (46 HSPs)
chr7 (285-342)||(9482920-9482977)
chr7 (285-342)||(32308106-32308163)
chr7 (286-342)||(20549778-20549834)
chr7 (285-342)||(26733290-26733347)
chr7 (298-342)||(5548675-5548719)
chr7 (298-342)||(29787385-29787429)
chr7 (291-342)||(17851423-17851474)
chr7 (299-342)||(21880152-21880195)
chr7 (304-342)||(2424619-2424657)
chr7 (284-342)||(22868027-22868085)
chr7 (268-342)||(42720906-42720980)
chr7 (285-342)||(598194-598251)
chr7 (285-342)||(1401011-1401068)
chr7 (285-342)||(23191882-23191939)
chr7 (285-342)||(26329398-26329455)
chr7 (285-342)||(27945027-27945084)
chr7 (309-342)||(30731047-30731080)
chr7 (285-342)||(30813798-30813855)
chr7 (152-227)||(11721312-11721387)
chr7 (288-342)||(2948672-2948726)
chr7 (307-341)||(7133295-7133329)
chr7 (300-342)||(9938240-9938282)
chr7 (285-335)||(11722121-11722171)
chr7 (304-342)||(14729706-14729744)
chr7 (283-341)||(18750860-18750918)
chr7 (312-342)||(22602726-22602756)
chr7 (285-342)||(3721080-3721136)
chr7 (285-342)||(5235972-5236029)
chr7 (285-342)||(6630928-6630985)
chr7 (305-342)||(9778506-9778543)
chr7 (285-342)||(11061092-11061149)
chr7 (309-342)||(12289124-12289157)
chr7 (309-342)||(16341506-16341539)
chr7 (309-342)||(19992011-19992044)
chr7 (284-341)||(23930204-23930261)
chr7 (309-342)||(24339652-24339685)
chr7 (309-342)||(25481912-25481945)
chr7 (309-342)||(26033477-26033510)
chr7 (310-342)||(17307904-17307936)
chr7 (298-342)||(18035880-18035924)
chr7 (310-342)||(18233614-18233646)
chr7 (298-334)||(19206049-19206085)
chr7 (298-342)||(27093429-27093473)
chr7 (298-342)||(27184828-27184872)
chr7 (298-342)||(28155569-28155613)
chr7 (297-337)||(32287484-32287524)
[»] chr3 (40 HSPs)
chr3 (281-342)||(1438786-1438847)
chr3 (299-342)||(11251978-11252021)
chr3 (268-342)||(21479087-21479161)
chr3 (288-342)||(28917990-28918044)
chr3 (285-342)||(8383243-8383300)
chr3 (281-342)||(8789566-8789627)
chr3 (285-342)||(11493377-11493434)
chr3 (285-338)||(11658801-11658854)
chr3 (281-342)||(15544675-15544736)
chr3 (286-342)||(4987307-4987363)
chr3 (298-342)||(7928449-7928493)
chr3 (299-342)||(10690278-10690321)
chr3 (291-342)||(16192766-16192817)
chr3 (299-342)||(34307796-34307839)
chr3 (288-342)||(4990983-4991037)
chr3 (285-343)||(21720750-21720808)
chr3 (281-342)||(40993351-40993413)
chr3 (304-342)||(49505170-49505208)
chr3 (309-342)||(9624651-9624684)
chr3 (309-342)||(11313816-11313849)
chr3 (309-342)||(12704017-12704050)
chr3 (309-342)||(14840307-14840340)
chr3 (309-342)||(14979191-14979224)
chr3 (309-342)||(15812837-15812870)
chr3 (285-338)||(23870579-23870632)
chr3 (309-342)||(25948903-25948936)
chr3 (309-342)||(26508120-26508153)
chr3 (309-342)||(27277854-27277887)
chr3 (285-342)||(29112296-29112353)
chr3 (309-342)||(32804556-32804589)
chr3 (309-342)||(34910327-34910360)
chr3 (281-334)||(40052314-40052367)
chr3 (298-342)||(5407263-5407307)
chr3 (286-342)||(9800027-9800083)
chr3 (309-341)||(10954962-10954994)
chr3 (310-342)||(12704056-12704088)
chr3 (309-341)||(20691329-20691361)
chr3 (309-341)||(21149077-21149109)
chr3 (298-342)||(32429396-32429440)
chr3 (285-341)||(46191362-46191418)
[»] chr1 (53 HSPs)
chr1 (287-341)||(20157367-20157421)
chr1 (268-341)||(17831548-17831621)
chr1 (285-342)||(36878447-36878504)
chr1 (298-342)||(25098571-25098615)
chr1 (287-342)||(19324550-19324605)
chr1 (285-339)||(2896140-2896194)
chr1 (288-342)||(34298425-34298479)
chr1 (285-342)||(398781-398838)
chr1 (306-342)||(25361893-25361929)
chr1 (286-342)||(27471582-27471638)
chr1 (299-342)||(7918227-7918270)
chr1 (268-338)||(10474997-10475067)
chr1 (285-339)||(40285673-40285727)
chr1 (304-342)||(44482235-44482273)
chr1 (309-342)||(1864896-1864929)
chr1 (285-342)||(6415017-6415074)
chr1 (285-342)||(6427336-6427393)
chr1 (285-338)||(9629920-9629973)
chr1 (285-342)||(11605951-11606008)
chr1 (309-342)||(12443476-12443509)
chr1 (285-342)||(16927201-16927258)
chr1 (309-342)||(31015053-31015086)
chr1 (285-342)||(31672911-31672968)
chr1 (285-342)||(36905983-36906040)
chr1 (285-342)||(38503306-38503363)
chr1 (309-342)||(40181881-40181914)
chr1 (270-342)||(3490406-3490478)
chr1 (286-342)||(10572605-10572661)
chr1 (286-342)||(38078677-38078733)
chr1 (169-220)||(7120066-7120117)
chr1 (309-344)||(9828054-9828089)
chr1 (289-340)||(17754301-17754352)
chr1 (298-341)||(26238129-26238172)
chr1 (268-302)||(8203739-8203773)
chr1 (280-322)||(13854412-13854454)
chr1 (268-342)||(22881632-22881706)
chr1 (309-342)||(113309-113342)
chr1 (309-342)||(1486725-1486758)
chr1 (285-342)||(5376516-5376573)
chr1 (285-342)||(5898282-5898339)
chr1 (309-342)||(10233263-10233296)
chr1 (309-342)||(14332658-14332691)
chr1 (309-342)||(18337339-18337372)
chr1 (309-342)||(24577202-24577235)
chr1 (309-342)||(25452164-25452197)
chr1 (285-342)||(37055872-37055929)
chr1 (309-342)||(40258949-40258982)
chr1 (285-337)||(16812529-16812581)
chr1 (286-342)||(19562637-19562693)
chr1 (314-342)||(34371728-34371756)
chr1 (281-341)||(38075987-38076047)
chr1 (298-342)||(39953162-39953206)
chr1 (298-342)||(41877486-41877530)
[»] chr8 (28 HSPs)
chr8 (285-342)||(34897071-34897128)
chr8 (268-342)||(4786354-4786428)
chr8 (152-239)||(14482099-14482186)
chr8 (281-342)||(8342956-8343015)
chr8 (284-342)||(14134684-14134742)
chr8 (309-342)||(3025561-3025594)
chr8 (293-342)||(4611528-4611577)
chr8 (285-342)||(8343302-8343359)
chr8 (281-342)||(13844612-13844673)
chr8 (285-342)||(20679411-20679468)
chr8 (285-342)||(24362218-24362275)
chr8 (285-342)||(39954295-39954352)
chr8 (309-342)||(40332201-40332234)
chr8 (299-338)||(18067954-18067993)
chr8 (304-342)||(37283826-37283864)
chr8 (309-342)||(4948662-4948695)
chr8 (309-342)||(7658473-7658506)
chr8 (309-342)||(11803269-11803302)
chr8 (309-342)||(11927102-11927135)
chr8 (309-342)||(13203651-13203684)
chr8 (309-342)||(14731722-14731755)
chr8 (285-342)||(20873055-20873112)
chr8 (309-342)||(25566851-25566884)
chr8 (309-342)||(31236593-31236626)
chr8 (285-342)||(36934656-36934713)
chr8 (309-341)||(12985402-12985434)
chr8 (152-212)||(41620377-41620437)
chr8 (285-337)||(41838144-41838196)
[»] chr4 (35 HSPs)
chr4 (285-342)||(22440616-22440673)
chr4 (285-342)||(903908-903965)
chr4 (298-342)||(8423734-8423778)
chr4 (297-344)||(38148739-38148786)
chr4 (285-342)||(13783267-13783324)
chr4 (305-342)||(18576053-18576090)
chr4 (285-342)||(36635310-36635367)
chr4 (286-342)||(19230325-19230381)
chr4 (294-342)||(28964264-28964312)
chr4 (298-342)||(40613449-40613493)
chr4 (307-342)||(2234258-2234293)
chr4 (311-342)||(16189721-16189752)
chr4 (266-341)||(31243565-31243640)
chr4 (296-342)||(999364-999410)
chr4 (285-334)||(34200295-34200342)
chr4 (285-342)||(35723400-35723458)
chr4 (309-342)||(5775374-5775407)
chr4 (309-342)||(9996850-9996883)
chr4 (309-342)||(11596368-11596401)
chr4 (281-342)||(15029747-15029808)
chr4 (309-342)||(17425405-17425438)
chr4 (309-342)||(24343517-24343550)
chr4 (285-342)||(26504315-26504372)
chr4 (309-342)||(29205454-29205487)
chr4 (309-342)||(32910561-32910594)
chr4 (309-342)||(54580039-54580072)
chr4 (309-342)||(56257943-56257976)
chr4 (298-342)||(1747211-1747255)
chr4 (310-342)||(3064929-3064961)
chr4 (286-334)||(8820395-8820443)
chr4 (285-337)||(11651155-11651207)
chr4 (309-341)||(20743295-20743327)
chr4 (312-340)||(30522933-30522961)
chr4 (309-341)||(46180953-46180985)
chr4 (290-342)||(47263977-47264029)
[»] chr2 (38 HSPs)
chr2 (285-342)||(23718012-23718069)
chr2 (285-342)||(24105684-24105741)
chr2 (281-341)||(29970566-29970626)
chr2 (285-342)||(21616748-21616805)
chr2 (285-342)||(31808063-31808120)
chr2 (286-342)||(21782834-21782890)
chr2 (285-342)||(21091709-21091766)
chr2 (291-344)||(22084846-22084899)
chr2 (285-342)||(30717546-30717603)
chr2 (285-342)||(39323250-39323307)
chr2 (274-342)||(44860297-44860363)
chr2 (298-342)||(18276520-18276564)
chr2 (298-342)||(28677908-28677952)
chr2 (152-240)||(31461334-31461422)
chr2 (298-342)||(36409643-36409687)
chr2 (298-338)||(37411264-37411304)
chr2 (274-341)||(18889608-18889674)
chr2 (153-240)||(33192089-33192176)
chr2 (291-342)||(42832292-42832343)
chr2 (309-339)||(2331804-2331834)
chr2 (153-239)||(28803593-28803679)
chr2 (309-342)||(5367202-5367235)
chr2 (268-341)||(12748653-12748726)
chr2 (169-242)||(15173420-15173493)
chr2 (285-342)||(20539690-20539747)
chr2 (309-342)||(23921263-23921296)
chr2 (281-340)||(24975343-24975399)
chr2 (309-342)||(25846751-25846784)
chr2 (309-342)||(28412360-28412393)
chr2 (285-342)||(30404866-30404923)
chr2 (309-342)||(35449523-35449556)
chr2 (285-342)||(37419729-37419786)
chr2 (281-342)||(38117175-38117236)
chr2 (309-341)||(10535776-10535808)
chr2 (309-341)||(17520087-17520119)
chr2 (306-342)||(27447030-27447066)
chr2 (169-229)||(33197342-33197402)
chr2 (309-341)||(36281695-36281727)
[»] scaffold0590 (1 HSPs)
scaffold0590 (153-240)||(1161-1248)
[»] scaffold0275 (1 HSPs)
scaffold0275 (153-240)||(2727-2814)
[»] chr6 (44 HSPs)
chr6 (288-342)||(19040341-19040395)
chr6 (285-342)||(7265609-7265666)
chr6 (285-342)||(9658865-9658922)
chr6 (285-342)||(13851722-13851779)
chr6 (300-342)||(34073363-34073405)
chr6 (309-342)||(9025510-9025543)
chr6 (285-342)||(9027164-9027221)
chr6 (285-342)||(16766683-16766740)
chr6 (285-342)||(30866160-30866217)
chr6 (309-342)||(31579241-31579274)
chr6 (288-344)||(5000640-5000696)
chr6 (310-342)||(13360388-13360420)
chr6 (270-342)||(6665180-6665256)
chr6 (271-342)||(7377951-7378022)
chr6 (311-342)||(11591886-11591917)
chr6 (287-342)||(17341680-17341735)
chr6 (311-342)||(26562701-26562732)
chr6 (299-342)||(32511682-32511725)
chr6 (268-342)||(5970124-5970198)
chr6 (309-342)||(5462696-5462729)
chr6 (285-342)||(5732526-5732583)
chr6 (309-342)||(7086805-7086838)
chr6 (309-342)||(7569184-7569217)
chr6 (309-342)||(7996394-7996427)
chr6 (309-342)||(8022374-8022407)
chr6 (309-342)||(8805588-8805621)
chr6 (309-342)||(9617444-9617477)
chr6 (309-342)||(9629393-9629426)
chr6 (309-342)||(10770690-10770723)
chr6 (285-338)||(10888994-10889047)
chr6 (285-342)||(12696310-12696367)
chr6 (309-342)||(16388249-16388282)
chr6 (285-342)||(17435185-17435242)
chr6 (285-342)||(17841605-17841662)
chr6 (285-342)||(28152085-28152141)
chr6 (309-342)||(31384930-31384963)
chr6 (309-342)||(34595144-34595177)
chr6 (268-340)||(2140499-2140571)
chr6 (310-338)||(10339146-10339174)
chr6 (285-341)||(10842518-10842574)
chr6 (309-341)||(13364722-13364754)
chr6 (286-334)||(15443682-15443730)
chr6 (152-220)||(22742282-22742350)
chr6 (309-341)||(34446575-34446607)
[»] scaffold0004 (1 HSPs)
scaffold0004 (285-342)||(92793-92850)
[»] scaffold0103 (1 HSPs)
scaffold0103 (285-342)||(51797-51854)
[»] scaffold0044 (1 HSPs)
scaffold0044 (309-342)||(53190-53223)
[»] scaffold0024 (1 HSPs)
scaffold0024 (268-341)||(18125-18198)
[»] scaffold0123 (1 HSPs)
scaffold0123 (270-342)||(44541-44613)
[»] scaffold1528 (1 HSPs)
scaffold1528 (289-340)||(1025-1076)
[»] scaffold0020 (1 HSPs)
scaffold0020 (292-342)||(135328-135378)
[»] scaffold0361 (1 HSPs)
scaffold0361 (309-342)||(14540-14573)
[»] scaffold0306 (1 HSPs)
scaffold0306 (285-342)||(13386-13443)
[»] scaffold0223 (1 HSPs)
scaffold0223 (309-342)||(20182-20215)
[»] scaffold0152 (1 HSPs)
scaffold0152 (285-342)||(21884-21941)
[»] scaffold0085 (1 HSPs)
scaffold0085 (285-334)||(26379-26428)
[»] scaffold0036 (1 HSPs)
scaffold0036 (309-342)||(9763-9796)
[»] scaffold0027 (1 HSPs)
scaffold0027 (309-342)||(46692-46725)
[»] scaffold0022 (1 HSPs)
scaffold0022 (309-342)||(90853-90886)
[»] scaffold0018 (1 HSPs)
scaffold0018 (285-342)||(192265-192322)
[»] scaffold0008 (1 HSPs)
scaffold0008 (309-342)||(263388-263421)


Alignment Details
Target: chr5 (Bit Score: 360; Significance: 0; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 28 - 407
Target Start/End: Original strand, 19438072 - 19438451
Alignment:
Q  28 tctccattggtgaagaaggcctttggagtaaatcaaagaaggtttcctgttgttgcagccttagcagcagatgctgatgatagtgaaattgaaatctcta 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19438072 tctccattggtgaagaaggcctttggagtaaatcaaagaaggtttccagttgttacagccttagcagcagatgctgatgatagtgaaattgaaatctcta 19438171  T
Q  128 atgggttagagttccacacttcatatttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataa 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19438172 atgggttagagttccacacttcatatttgactttttcttagcttttgttatagaaatattttatatataagcacttgtacgataagcgtttatcctataa 19438271  T
Q  228 gtacttaattaagatatgtatccaactataaagcacgaatacacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcaca 327  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19438272 gtacttaattaagatatgtatccaactataaagcacgaatacacggataccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcaca 19438371  T
Q  328 taattcagtgtaattttgattttaaaccttgtgtttaactttttctgatatttccctttcttaattcttttgcttattga 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19438372 taattcagtgtaattttgattttaaaccttgtgtttaactttttctgatatttccctttcttaattcttttgcttattga 19438451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 342
Target Start/End: Original strand, 10022625 - 10022675
Alignment:
Q  292 acacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  10022625 acacatcgacatcgttgataatttgataaaatcatataattcagtgtaatt 10022675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 6326370 - 6326313
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||||||||||  |||||||||||||| ||||||||||||||||||    
T  6326370 gacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaatt 6326313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 12927640 - 12927697
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||||| |||||||||| ||||||||||||||||| |||||| |||||||||    
T  12927640 gacacggacacaccgacatcgctaataatttgagaaaatcatataatttagtgtaatt 12927697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 7175092 - 7175045
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataatt 332  Q
    |||||||||||||||||| || | ||||||||||||||||||||||||    
T  7175092 gacactgacacatcgacaccgttaataatttgagaaaatcacataatt 7175045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 3966489 - 3966546
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||   ||||| |||| ||||||||||||||||||| ||||||||||||||    
T  3966489 gacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaatt 3966546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 6471938 - 6471905
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||||    
T  6471938 ataatttgagaaaatcacataattcagtgtaatt 6471905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 12264914 - 12264845
Alignment:
Q  273 gacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||   | ||| |||| || |||||||||||| |||| |||||||||||||    
T  12264914 gacaccaaacacgacactgacatgccaacaccgctaattatttgagaaaattacatgattcagtgtaatt 12264845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 18421894 - 18421857
Alignment:
Q  305 gctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  18421894 gctgataatttgagaaaatcacataatccagtgtaatt 18421857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 27144449 - 27144506
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||||| |||| |||||||||| ||||||||||||| |||||||||    
T  27144449 gacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaatt 27144506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 28588723 - 28588690
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||||    
T  28588723 ataatttgagaaaatcacataattcagtgtaatt 28588690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 31084305 - 31084366
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||  |||||  ||| ||||||||| |||||||||||||||| |||||||    
T  31084305 acacgacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaatt 31084366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 24273078 - 24273046
Alignment:
Q  310 taatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||||||||||    
T  24273078 taatttgagaaaatcacataattcagtgtaatt 24273046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 24389136 - 24389168
Alignment:
Q  310 taatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||||||||||    
T  24389136 taatttgagaaaatcacataattcagtgtaatt 24389168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 27932234 - 27932278
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  27932234 cgacaccgctaataatttgagaaaattacataattcagtgtaatt 27932278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 341
Target Start/End: Complemental strand, 21194253 - 21194222
Alignment:
Q  310 taatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||||||||||||||||||||||||||    
T  21194253 taatttgagaaaatcacataattcagtgtaat 21194222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 23016048 - 23016005
Alignment:
Q  299 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||| | || |||||||||||||||||||||||||||||||    
T  23016048 gacatcgttaatcatttgagaaaatcacataattcagtgtaatt 23016005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 35095869 - 35095932
Alignment:
Q  152 atttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcg 215  Q
    |||||||||| | ||| ||||||||||| ||||| |||| |||||||||||| || ||||||||    
T  35095869 atttgactttattttatcttttgttatagaaatagtttaaatataagcacttatatgataagcg 35095932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 37063161 - 37063248
Alignment:
Q  153 tttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaag 240  Q
    ||||||||| | ||| ||||||||||| ||||| |||||| ||||||| || || || |||| ||||| ||||||||| || ||||||    
T  37063161 tttgactttattttatcttttgttatagaaatagtttatacataagcatttatatgacaagcatttatgctataagtagttgattaag 37063248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 17593776 - 17593738
Alignment:
Q  304 cgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  17593776 cgctaataatttgagaaaatcacgtaattcagtgtaatt 17593738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 30502442 - 30502404
Alignment:
Q  304 cgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  30502442 cgctaataatttgagaaaatcacttaattcagtgtaatt 30502404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 30542785 - 30542747
Alignment:
Q  304 cgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  30542785 cgctaataatttgagaaaatcacttaattcagtgtaatt 30542747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 342
Target Start/End: Complemental strand, 41091303 - 41091273
Alignment:
Q  312 atttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||||||||    
T  41091303 atttgagaaaatcacataattcagtgtaatt 41091273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 5468051 - 5467994
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||| || | | || | ||||||||| ||||||||||||||||||||||||    
T  5468051 gacactgacacgtcaataccgataataatttgataaaatcacataattcagtgtaatt 5467994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 6247632 - 6247665
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  6247632 ataatttgaaaaaatcacataattcagtgtaatt 6247665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 11685921 - 11685982
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||   ||||| |||| ||||||||||||| || ||||||| |||||||||    
T  11685921 acacgacactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaatt 11685982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 14674255 - 14674312
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||  ||| ||||||||| |||||||||||||| |||||||||    
T  14674255 gacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatt 14674312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 21191105 - 21191072
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  21191105 ataatttgaaaaaatcacataattcagtgtaatt 21191072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 21576794 - 21576761
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  21576794 ataatttgaaaaaatcacataattcagtgtaatt 21576761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 30098312 - 30098369
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||| | || | |||||||||||||||||||||||||| |||||||    
T  30098312 gacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaatt 30098369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 35017047 - 35017080
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||| |||||||||    
T  35017047 ataatttgagaaaatcacataatttagtgtaatt 35017080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 39698527 - 39698584
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||   ||||  ||| ||||||||| ||||||||||||||||||||||||    
T  39698527 gacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatt 39698584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 42893346 - 42893403
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||||| |||||  ||| ||||||||| ||||||||||||| ||||||||||    
T  42893346 gacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaatt 42893403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 43001786 - 43001843
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||  ||||||  ||| ||||||||| ||||| ||||||||||||||||||    
T  43001786 gacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaatt 43001843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 2436904 - 2436956
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattc 333  Q
    |||||||||||||||  ||||| |||| ||||||||  |||||||||||||||    
T  2436904 acacgacactgacacgccgacaccgctaataatttgcaaaaatcacataattc 2436956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 3951581 - 3951502
Alignment:
Q  172 ttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaagatatgtatccaa 252  Q
    ||||| || |||||||||||| |||||||||| || ||||||| ||||| ||||||   |||||||||| ||| |||||||    
T  3951581 ttgttgtataaatattttatacataagcacttatatgataagcatttatgctataa-cgcttaattaagttatttatccaa 3951502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 19168894 - 19168838
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    |||||||||||| | ||| ||||  |||||||| |||||||||| ||||||||||||    
T  19168894 gacactgacacacctacaccgctattaatttgataaaatcacattattcagtgtaat 19168838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 21194171 - 21194139
Alignment:
Q  310 taatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||| |||||||||||||    
T  21194171 taatttgagaaaatcacatcattcagtgtaatt 21194139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 29281131 - 29281087
Alignment:
Q  170 ttttgttatacaaatattttatatataagcacttgtacgataagc 214  Q
    |||||||||| ||||| |||||||||||| |||| ||||||||||    
T  29281131 ttttgttataaaaatagtttatatataagtacttatacgataagc 29281087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 31264448 - 31264480
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||||||||| |||||||||||||||||    
T  31264448 ataatttgagaaaatgacataattcagtgtaat 31264480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 9482920 - 9482977
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  9482920 gacactgacacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaatt 9482977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 32308106 - 32308163
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  32308106 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 32308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 20549778 - 20549834
Alignment:
Q  286 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||| ||||| |||| |||||||||||||||||| |||||||||||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaatt 20549834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 26733290 - 26733347
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||| |||||| |||| ||||||||| |||||||||||||||||| |||||    
T  26733290 gacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaatt 26733347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 5548675 - 5548719
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||    
T  5548675 cgacaccgctgataatttgagaaaatcaaataattcagtgtaatt 5548719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 29787429 - 29787385
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||    
T  29787429 cgacaccgctaataatttgagaaaatcacataattcagtgtaatt 29787385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 17851423 - 17851474
Alignment:
Q  291 gacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||| | |||| ||||||| ||||||||||||||||||||||||||    
T  17851423 gacacatcgataccgctaataattttagaaaatcacataattcagtgtaatt 17851474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 342
Target Start/End: Original strand, 21880152 - 21880195
Alignment:
Q  299 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  21880152 gacatcgctaataatttgagaaaattacataattcagtgtaatt 21880195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 342
Target Start/End: Original strand, 2424619 - 2424657
Alignment:
Q  304 cgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  2424619 cgctaataatttgagaaaatcacataattcagtgtaatt 2424657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 22868027 - 22868085
Alignment:
Q  284 cgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||  ||||| | || ||||| ||||||||||||||||||||||||||||    
T  22868027 cgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaatt 22868085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 42720980 - 42720906
Alignment:
Q  268 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| || ||| ||||||||||| | |||| |||| ||||||||| |||||||||||||| | |||||||    
T  42720980 acacagacatcagacatgacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaatt 42720906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 598194 - 598251
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||| |||| ||||||| |||||||||| ||||| | |||||||    
T  598194 gacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaatt 598251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 1401011 - 1401068
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||   || |||||| ||||||||||||| ||||||||||||||||||||    
T  1401011 gacactgacacgctgatatcgctaataatttgagaaactcacataattcagtgtaatt 1401068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 23191882 - 23191939
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||| ||  ||||| |||| ||||||||||||||||||||| ||||||||||||    
T  23191882 gacactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaatt 23191939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 26329455 - 26329398
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||||| | |||||||||||||| |||| ||||||||||||||    
T  26329455 gacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaatt 26329398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 27945027 - 27945084
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||||| | || ||||||||||||||| ||||||||||||||||||    
T  27945027 gacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaatt 27945084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 30731047 - 30731080
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||||    
T  30731047 ataatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 30813798 - 30813855
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||| ||  |||||| ||| ||||||||||||||| ||||||||||||||||||    
T  30813798 gacactgatactccgacattgctaataatttgagaaaattacataattcagtgtaatt 30813855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 11721312 - 11721387
Alignment:
Q  152 atttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataa 227  Q
    |||||||||| | ||| ||||||||||| ||||| |||||| | || ||||| || ||||||||||||| ||||||    
T  11721312 atttgactttcttttaacttttgttatagaaatagtttataaagaaacacttatatgataagcgtttattctataa 11721387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 2948672 - 2948726
Alignment:
Q  288 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||  ||||| |||||||||||| |||||||||| ||||| |||||||||    
T  2948672 actgacacgccgacaccgctgataattttagaaaatcacgtaatttagtgtaatt 2948726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 7133329 - 7133295
Alignment:
Q  307 tgataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||||||||||| |||||||||||||||||    
T  7133329 tgataatttgagaaaatgacataattcagtgtaat 7133295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 9938240 - 9938282
Alignment:
Q  300 acatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||| |||||| ||||||| |||||||||    
T  9938240 acatcgctgataatttgacaaaatcgcataattaagtgtaatt 9938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 11722171 - 11722121
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcag 335  Q
    |||||||||||  ||||| |||| | |||||||||||||||||||||||||    
T  11722171 gacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 342
Target Start/End: Original strand, 14729706 - 14729744
Alignment:
Q  304 cgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  14729706 cgctaataatttgagaaaatcacgtaattcagtgtaatt 14729744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 341
Target Start/End: Original strand, 18750860 - 18750918
Alignment:
Q  283 acgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    |||||||||||||||||||| || | ||||||| ||||||| |||||||| | ||||||    
T  18750860 acgacactgacacatcgacaacggtaataatttaagaaaatgacataattgaatgtaat 18750918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 342
Target Start/End: Complemental strand, 22602756 - 22602726
Alignment:
Q  312 atttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaatt 22602726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 3721080 - 3721136
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||  ||||||| ||| |||||||||||||||||||||||| ||| |||||    
T  3721080 gacactgacatttcgacat-gctaataatttgagaaaatcacataatttagtataatt 3721136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 5235972 - 5236029
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||| |||||| |||| ||||||| ||||||| | |||||| |||||||||    
T  5235972 gacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaatt 5236029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 6630985 - 6630928
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||||| | || ||||||||||||| |||| |||||||||||||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaatt 6630928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Original strand, 9778506 - 9778543
Alignment:
Q  305 gctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  9778506 gctgataatttgaaaaaatcacataattcagtataatt 9778543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 11061149 - 11061092
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||| |||||  ||| ||||||||| |||||||||||||| ||| |||||    
T  11061149 gacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataatt 11061092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 12289124 - 12289157
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||| ||||    
T  12289124 ataatttgagaaaatcacataattcagtggaatt 12289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 16341506 - 16341539
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||| |||||||||    
T  16341506 ataatttgagaaaatcacataattaagtgtaatt 16341539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 19992011 - 19992044
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||| ||||||||||||    
T  19992011 ataatttgagaaaatcacatatttcagtgtaatt 19992044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 23930204 - 23930261
Alignment:
Q  284 cgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||| |||||||||||||  | |  |||||||||||||| |||||||||||||||||    
T  23930204 cgacattgacacatcgacacggatagtaatttgagaaaatgacataattcagtgtaat 23930261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 24339652 - 24339685
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  24339652 ataatttgaaaaaatcacataattcagtgtaatt 24339685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 25481912 - 25481945
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  25481912 ataatttgaaaaaatcacataattcagtgtaatt 25481945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 26033510 - 26033477
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  26033510 ataatttgaaaaaatcacataattcagtgtaatt 26033477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 17307904 - 17307936
Alignment:
Q  310 taatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||| ||||||||||||||||||    
T  17307904 taatttgagaaaataacataattcagtgtaatt 17307936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 18035924 - 18035880
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||||||||||| || |||||||||||||||| ||||||    
T  18035924 cgacaccgctgataattttaggaaatcacataattcagcgtaatt 18035880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 18233646 - 18233614
Alignment:
Q  310 taatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||| ||||||||||||||||||    
T  18233646 taatttgagaaaatgacataattcagtgtaatt 18233614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 19206049 - 19206085
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattca 334  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  19206049 cgacaccgctaataatttgagaaaatcacataattca 19206085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 27093473 - 27093429
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| ||||||| |||||||||||||||| |||||||||    
T  27093473 cgacaccgctaataatttaagaaaatcacataatttagtgtaatt 27093429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 27184828 - 27184872
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| ||||||| |||||||||||||||| |||||||||    
T  27184828 cgacaccgctaataatttaagaaaatcacataatttagtgtaatt 27184872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 28155569 - 28155613
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| ||||||||||||||| ||||||||| ||||||||    
T  28155569 cgacaccgctaataatttgagaaaattacataattcggtgtaatt 28155613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 32287524 - 32287484
Alignment:
Q  297 tcgacatcgctgataatttgagaaaatcacataattcagtg 337  Q
    |||||| |||| ||||| |||||||||||||||||||||||    
T  32287524 tcgacaccgctaataatctgagaaaatcacataattcagtg 32287484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 1438786 - 1438847
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||    
T  1438786 acacgacactgacacaccgacatcgctaacaatttgagaaaatcacataattcagtataatt 1438847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 342
Target Start/End: Original strand, 11251978 - 11252021
Alignment:
Q  299 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||    
T  11251978 gacattgctaataatttgagaaaatcacataattcagtgtaatt 11252021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 21479087 - 21479161
Alignment:
Q  268 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| ||||||  |||||||||||||||  |||||  ||| ||||||||| ||||||||| ||||||||||||||    
T  21479087 acacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaatt 21479161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 28917990 - 28918044
Alignment:
Q  288 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||  |||||| ||| ||||||||| ||||||||||||||||||||||||    
T  28917990 actgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaatt 28918044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 8383243 - 8383300
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| ||||||  ||||| |||| ||||||||||||||||| ||||||||||||||||    
T  8383243 gacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaatt 8383300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 8789627 - 8789566
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| |||| |||||| |||||  ||| ||||||||||||||||||||||||| ||||||||    
T  8789627 acacaacacagacacaccgacacggcttataatttgagaaaatcacataattccgtgtaatt 8789566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 11493434 - 11493377
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| |||||| |||||| | || ||||| ||||||||||||||||||||||||||||    
T  11493434 gacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaatt 11493377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 338
Target Start/End: Original strand, 11658801 - 11658854
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgt 338  Q
    |||||||||||| | |||||| | |||||||||||||||| |||||||||||||    
T  11658801 gacactgacacaccaacatcgttaataatttgagaaaatcgcataattcagtgt 11658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 15544675 - 15544736
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||| | |||| |||| ||||||||| ||||||||||||||| || |||||    
T  15544675 acacgacactgacacgttgacaccgctaataatttgataaaatcacataattctgtataatt 15544736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 4987363 - 4987307
Alignment:
Q  286 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||  |||||  ||| ||||||||| ||||||||||||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 4987307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 7928449 - 7928493
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||    
T  7928449 cgacaccgctaataatttgaaaaaatcacataattcagtgtaatt 7928493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 10690321 - 10690278
Alignment:
Q  299 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaatt 10690278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 16192817 - 16192766
Alignment:
Q  291 gacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||| ||||| || | ||||||||||||||| ||||||||||||||||||    
T  16192817 gacacaccgacaccgttaataatttgagaaaataacataattcagtgtaatt 16192766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 34307839 - 34307796
Alignment:
Q  299 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||    
T  34307839 gacaccgctaataatttgagaaaatcacatatttcagtgtaatt 34307796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 342
Target Start/End: Complemental strand, 4991037 - 4990983
Alignment:
Q  288 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||  ||||| |||| ||| ||||||||||| ||||||||||||||||||    
T  4991037 actgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaatt 4990983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 21720750 - 21720808
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaattt 343  Q
    |||||||||||  ||||| || | |||||||||||| ||| ||||||||||||||||||    
T  21720750 gacactgacacgccgacaccgataataatttgagaatatctcataattcagtgtaattt 21720808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 40993413 - 40993351
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaa-tcacataattcagtgtaatt 342  Q
    ||||||||| ||||| |||||| |||| ||||||| | |||| ||||||||||||||||||||    
T  40993413 acacgacacggacacctcgacaccgctaataatttaaaaaaaatcacataattcagtgtaatt 40993351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 49505208 - 49505170
Alignment:
Q  304 cgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  49505208 cgctaataatttgagaaaatcacataatttagtgtaatt 49505170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 9624651 - 9624684
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||| |||||||    
T  9624651 ataatttgagaaaatcacataattcaatgtaatt 9624684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 11313849 - 11313816
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||| |||||||||    
T  11313849 ataatttgagaaaatcacataatttagtgtaatt 11313816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 12704017 - 12704050
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||| |||||||||||||||||||    
T  12704017 ataatttgagaaaagcacataattcagtgtaatt 12704050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 14840340 - 14840307
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||| ||||||||||||||||||||||||||    
T  14840340 ataatttcagaaaatcacataattcagtgtaatt 14840307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 14979191 - 14979224
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  14979191 ataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 15812870 - 15812837
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||| |||||||||||    
T  15812870 ataatttgagaaaatcacataactcagtgtaatt 15812837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 23870632 - 23870579
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgt 338  Q
    ||||| ||||| |||||| |||| ||||||||| ||||||| ||||||||||||    
T  23870632 gacacggacacgtcgacaccgctaataatttgaaaaaatcatataattcagtgt 23870579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 25948936 - 25948903
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  25948936 ataatttgaaaaaatcacataattcagtgtaatt 25948903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 26508120 - 26508153
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  26508120 ataatttgaaaaaatcacataattcagtgtaatt 26508153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 27277887 - 27277854
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||| |||||||||    
T  27277887 ataatttgagaaaatcacataatttagtgtaatt 27277854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 29112353 - 29112296
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||| | |||| | || || |||||||||||||| ||||||||||||||||    
T  29112353 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatt 29112296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 32804589 - 32804556
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||| |||||||||    
T  32804589 ataatttgagaaaatcacataatttagtgtaatt 32804556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 34910327 - 34910360
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  34910327 ataatttgaaaaaatcacataattcagtgtaatt 34910360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 40052314 - 40052367
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattca 334  Q
    |||||||||||||||  |||||  ||| ||||||||| ||||||||||||||||    
T  40052314 acacgacactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 5407307 - 5407263
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| | |||||||||||||||||||||||| |||||||    
T  5407307 cgacaccgctaaaaatttgagaaaatcacataattcattgtaatt 5407263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 9800027 - 9800083
Alignment:
Q  286 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||  ||||| | || ||||||||||||||| ||||||||| ||||||||    
T  9800027 acactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaatt 9800083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 10954962 - 10954994
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||| |||||||||||||||||||||||    
T  10954962 ataatttgaaaaaatcacataattcagtgtaat 10954994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 12704056 - 12704088
Alignment:
Q  310 taatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||| |||||||    
T  12704056 taatttgagaaaatcacataattcaatgtaatt 12704088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 20691329 - 20691361
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||||||||| |||||||||||||||||    
T  20691329 ataatttgagaaaatgacataattcagtgtaat 20691361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 21149077 - 21149109
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||||||||| |||||||||||||||||    
T  21149077 ataatttgagaaaatgacataattcagtgtaat 21149109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 32429440 - 32429396
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| ||||||| ||||||||||||||||||||| ||||    
T  32429440 cgacaacgctaataatttaagaaaatcacataattcagtgcaatt 32429396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 46191418 - 46191362
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||| |||||||||||| |  | |||||||||||||||||||||||| | ||||||    
T  46191418 gacacggacacatcgacaccaataataatttgagaaaatcacataattaaatgtaat 46191362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 20157421 - 20157367
Alignment:
Q  287 cactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  20157421 cactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaat 20157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 17831621 - 17831548
Alignment:
Q  268 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    |||||||||||  | |||||||||||||  ||||| |||| |||||||||||||||||||| ||||||||||||    
T  17831621 acacagacaccggatacgacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaat 17831548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 36878447 - 36878504
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 36878504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 25098615 - 25098571
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  25098615 cgacaccgctgataatttgagaaaatcacataattcagtgtaatt 25098571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 19324550 - 19324605
Alignment:
Q  287 cactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||| || ||||||  ||||||||||||||||||||||||||||||||||||||    
T  19324550 cactgatacgtcgacactgctgataatttgagaaaatcacataattcagtgtaatt 19324605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 339
Target Start/End: Complemental strand, 2896194 - 2896140
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgta 339  Q
    |||||||||||  ||||| |||| |||||||||||||||||||||||||||||||    
T  2896194 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 34298425 - 34298479
Alignment:
Q  288 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||| | || ||||||||||||||||||||||||||||||||||    
T  34298425 actgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaatt 34298479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 398838 - 398781
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||||| |||| ||||||||| ||||||||||||||||||||||||    
T  398838 gacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatt 398781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 25361893 - 25361929
Alignment:
Q  306 ctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||||||||||||||    
T  25361893 ctgataatttgagaaaatcacataattcagtgtaatt 25361929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 27471638 - 27471582
Alignment:
Q  286 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||| ||| | |||| |||||||||||||| |||||||||||||||||||    
T  27471638 acactgacacaccgataccgctaataatttgagaaaagcacataattcagtgtaatt 27471582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 7918270 - 7918227
Alignment:
Q  299 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  7918270 gacatcactaataatttgagaaaatcacataattcagtgtaatt 7918227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 338
Target Start/End: Complemental strand, 10475067 - 10474997
Alignment:
Q  268 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgt 338  Q
    |||| ||||||  |||||||| ||||||  ||||| |||| |||| |||||||||||||||||||||||||    
T  10475067 acacggacaccggacacgacattgacacgccgacaccgctaataacttgagaaaatcacataattcagtgt 10474997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 339
Target Start/End: Complemental strand, 40285727 - 40285673
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgta 339  Q
    |||||||||||| | ||| |||| |||||||||||||||| ||||||||||||||    
T  40285727 gacactgacacaccaacaccgctaataatttgagaaaatcgcataattcagtgta 40285673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 342
Target Start/End: Original strand, 44482235 - 44482273
Alignment:
Q  304 cgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  44482235 cgcttataatttgagaaaatcacataattcagtgtaatt 44482273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 1864929 - 1864896
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||||    
T  1864929 ataatttgagaaaatcacataattcagtgtaatt 1864896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 6415074 - 6415017
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||||||| || |||||||||||||||||||| |||| |||||    
T  6415074 gacactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaatt 6415017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 6427336 - 6427393
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  | ||| |||| |||||||||||||||||||||||||| |||||||    
T  6427336 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaatt 6427393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 9629973 - 9629920
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgt 338  Q
    ||||| |||||||||||| |||| ||||||||| ||||||| ||||||||||||    
T  9629973 gacaccgacacatcgacaccgctaataatttgataaaatcatataattcagtgt 9629920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 11606008 - 11605951
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||| | |||||||||||||| ||||||||| ||||||| ||||||||||| ||||    
T  11606008 gacacttaaacatcgacatcgctaataatttgaaaaaatcatataattcagtgaaatt 11605951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 12443509 - 12443476
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||||    
T  12443509 ataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 16927258 - 16927201
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||| ||| ||| ||| ||||||||| ||||||| ||||||||||||||||    
T  16927258 gacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaatt 16927201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 31015053 - 31015086
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||||    
T  31015053 ataatttgagaaaatcacataattcagtgtaatt 31015086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 31672968 - 31672911
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||| |||||  ||| ||||||||| |||||||| |||||||||||||||    
T  31672968 gacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaatt 31672911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 36905983 - 36906040
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||| | ||| |||| ||||| ||||||||||||||||||||| ||||||    
T  36905983 gacactgacacaccaacaccgctaataatctgagaaaatcacataattcagagtaatt 36906040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 38503306 - 38503363
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||| ||||| ||||| |||| ||||||||||||||||| ||| ||||||||||||    
T  38503306 gacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaatt 38503363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 40181881 - 40181914
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||||    
T  40181881 ataatttgagaaaatcacataattcagtgtaatt 40181914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 3490478 - 3490406
Alignment:
Q  270 acagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||  |||||||||||||||  |||||  ||| ||||||||||||||  |||| |||||||||||||    
T  3490478 acagacaccggacacgacactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaatt 3490406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 10572661 - 10572605
Alignment:
Q  286 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||  ||||| | || ||||||||||||||||||||||||| ||||||||    
T  10572661 acactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaatt 10572605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 38078733 - 38078677
Alignment:
Q  286 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||| ||||||  ||| ||||||||| |||||||||||||||| |||||||    
T  38078733 acactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaatt 38078677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 7120117 - 7120066
Alignment:
Q  169 cttttgttatacaaatattttatatataagcacttgtacgataagcgtttat 220  Q
    ||||||||||| ||||| ||||||||||||||||| ||| ||||||| ||||    
T  7120117 cttttgttatataaatagtttatatataagcacttataccataagcgcttat 7120066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 344
Target Start/End: Original strand, 9828054 - 9828089
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatttt 344  Q
    ||||||||| ||||||||||||||||||||||||||    
T  9828054 ataatttgataaaatcacataattcagtgtaatttt 9828089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 17754301 - 17754352
Alignment:
Q  289 ctgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaa 340  Q
    |||||||| ||||| |||| ||||||||| ||||| ||||||||||||||||    
T  17754301 ctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaa 17754352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 26238172 - 26238129
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||    
T  26238172 cgacaccgctaataatttgagaaaataacataattcagtgtaat 26238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 8203739 - 8203773
Alignment:
Q  268 acacagacaccaaacacgacactgacacatcgaca 302  Q
    ||||| |||||||||||||||||||||||||||||    
T  8203739 acacatacaccaaacacgacactgacacatcgaca 8203773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 13854454 - 13854412
Alignment:
Q  280 aacacgacactgacacatcgacatcgctgataatttgagaaaa 322  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||    
T  13854454 aacatgacactgacacatcgacatcggtgataattttagaaaa 13854412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 22881706 - 22881632
Alignment:
Q  268 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| ||||||  |||||||||||||||  |||||   || ||||||||| |||||||||||||| |||||||||    
T  22881706 acacggacaccggacacgacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatt 22881632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 113309 - 113342
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  113309 ataatttgaaaaaatcacataattcagtgtaatt 113342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 1486758 - 1486725
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  1486758 ataatttgaaaaaatcacataattcagtgtaatt 1486725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 5376573 - 5376516
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||| ||||  ||||| |||| ||||||| ||||||| ||||||||||||||||||    
T  5376573 gacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaatt 5376516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 5898339 - 5898282
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||| ||  ||||| |||| ||||| ||| ||||||||||||||||||||||||    
T  5898339 gacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaatt 5898282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 10233263 - 10233296
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| |||||||||||||||||||||||||||||    
T  10233263 ataaattgagaaaatcacataattcagtgtaatt 10233296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 14332691 - 14332658
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||| |||||||||    
T  14332691 ataatttgagaaaatcacataatttagtgtaatt 14332658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 18337339 - 18337372
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  18337339 ataatttgaaaaaatcacataattcagtgtaatt 18337372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 24577235 - 24577202
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  24577235 ataatttgaaaaaatcacataattcagtgtaatt 24577202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 25452197 - 25452164
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||| |||||||||||||||||    
T  25452197 ataatttgagaaaatctcataattcagtgtaatt 25452164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 37055929 - 37055872
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||| ||||||| |  ||| ||||||||||||||| |||||||| |||||||||    
T  37055929 gacactgatacatcgatactgctaataatttgagaaaattacataatttagtgtaatt 37055872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 40258982 - 40258949
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  40258982 ataatttgaaaaaatcacataattcagtgtaatt 40258949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 16812529 - 16812581
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtg 337  Q
    |||||||||||| ||||| |  | ||||||||| |||||||||||||||||||    
T  16812529 gacactgacacaccgacaccaataataatttgacaaaatcacataattcagtg 16812581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 19562693 - 19562637
Alignment:
Q  286 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||  |||||  ||| |||||||||||||||| |||| ||||||||||||    
T  19562693 acactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaatt 19562637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 342
Target Start/End: Original strand, 34371728 - 34371756
Alignment:
Q  314 ttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||||||    
T  34371728 ttgagaaaatcacataattcagtgtaatt 34371756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 38076047 - 38075987
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||| |||||  |||||  ||| |||||||||| ||||||||||| ||||||||||    
T  38076047 acacgacacggacacgacgacactgctaataatttgagtaaatcacataagtcagtgtaat 38075987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 39953206 - 39953162
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| ||||||| |||||||||||||||| |||||||||    
T  39953206 cgacaccgctaataattttagaaaatcacataatttagtgtaatt 39953162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 41877530 - 41877486
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| ||||||||||||||| |||||||| |||||||||    
T  41877530 cgacaccgctaataatttgagaaaattacataatttagtgtaatt 41877486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 34897071 - 34897128
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  34897071 gacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaatt 34897128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 4786428 - 4786354
Alignment:
Q  268 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| |||||| ||||||||||||||||  ||||| |  | ||||||| ||||||||||||||||||||||||||    
T  4786428 acactgacaccgaacacgacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaatt 4786354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 14482186 - 14482099
Alignment:
Q  152 atttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaa 239  Q
    |||||||||| | ||| ||||||||||| ||||| |||||| |||||||||| || |||||||  | || ||||||| ||||||||||    
T  14482186 atttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataagcactaatgctataagaacttaattaa 14482099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 8342956 - 8343015
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||  |||||| ||| ||||||||| |||||||||||||| |||||||||    
T  8342956 acacgacactgacac--cgacatagctaataatttgaaaaaatcacataatttagtgtaatt 8343015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 14134684 - 14134742
Alignment:
Q  284 cgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||| ||||| ||||||   || ||||||||||||||||||||||||||||||||||    
T  14134684 cgacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaatt 14134742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 3025561 - 3025594
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||||    
T  3025561 ataatttgagaaaatcacataattcagtgtaatt 3025594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 342
Target Start/End: Original strand, 4611528 - 4611577
Alignment:
Q  293 cacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  4611528 cacaccgacaccgctaataatttgagaaaataacataattcagtgtaatt 4611577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 8343302 - 8343359
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||||| |||||| ||| ||||||||| |||||||||||||| |||||||||    
T  8343302 gacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaatt 8343359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 13844673 - 13844612
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| |||||  |||||  ||| |||||||||||||||||||||||| |||||||||    
T  13844673 acacgacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaatt 13844612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 20679468 - 20679411
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||  |||||| | || ||||||||||||||||||||| ||||||||||||    
T  20679468 gacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaatt 20679411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 24362275 - 24362218
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||||  ||||| |||| ||||||||||| ||||||||||||||||||||||    
T  24362275 gacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaatt 24362218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 39954352 - 39954295
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||||  ||||| |||| |||||||||||||||||||||||| |||||||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaatt 39954295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 40332201 - 40332234
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||||    
T  40332201 ataatttgagaaaatcacataattcagtgtaatt 40332234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 18067993 - 18067954
Alignment:
Q  299 gacatcgctgataatttgagaaaatcacataattcagtgt 338  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  18067993 gacaccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 37283864 - 37283826
Alignment:
Q  304 cgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  37283864 cgctaataatctgagaaaatcacataattcagtgtaatt 37283826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 4948662 - 4948695
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  4948662 ataatttgaaaaaatcacataattcagtgtaatt 4948695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 7658473 - 7658506
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||| ||||||||||||||||||    
T  7658473 ataatttgagaaaattacataattcagtgtaatt 7658506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 11803269 - 11803302
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||| ||||||||||||||||||||||||||    
T  11803269 ataatttaagaaaatcacataattcagtgtaatt 11803302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 11927135 - 11927102
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  11927135 ataatttgataaaatcacataattcagtgtaatt 11927102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 13203651 - 13203684
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||| ||||||||||||||||||    
T  13203651 ataatttgagaaaattacataattcagtgtaatt 13203684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 14731722 - 14731755
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||| |||||||||    
T  14731722 ataatttgagaaaatcacataatttagtgtaatt 14731755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 20873055 - 20873112
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||| | | ||||||||| |||||||||||||| |||||||||    
T  20873055 gacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaatt 20873112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 25566851 - 25566884
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  25566851 ataatttgaaaaaatcacataattcagtgtaatt 25566884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 31236626 - 31236593
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||| |||||||    
T  31236626 ataatttgagaaaatcacataattcaatgtaatt 31236593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 36934656 - 36934713
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||| |||| |||||| |||| |||||| || |||||||||||||||| |||||||    
T  36934656 gacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaatt 36934713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 12985402 - 12985434
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaat 341  Q
    |||||||||||||||||||||||||| ||||||    
T  12985402 ataatttgagaaaatcacataattcaatgtaat 12985434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 41620377 - 41620437
Alignment:
Q  152 atttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataa 212  Q
    |||||||||| | ||| ||||||||| | |||||  ||||||||||||||||||| |||||    
T  41620377 atttgactttattttatcttttgttacaaaaataacttatatataagcacttgtatgataa 41620437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 41838196 - 41838144
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtg 337  Q
    ||||||||||| ||||||  ||| ||||||| | |||||||||||||||||||    
T  41838196 gacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 41838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 22440673 - 22440616
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||| ||||||||| || | ||||||||||||||||||||||||||||||||||    
T  22440673 gacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaatt 22440616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 903908 - 903965
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||| || || || | ||||||||||||||||||||||||||||||||||    
T  903908 gacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaatt 903965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 8423778 - 8423734
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||    
T  8423778 cgacaccgctaataatttgagaaaatcacataattcagtgtaatt 8423734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 38148786 - 38148739
Alignment:
Q  297 tcgacatcgctgataatttgagaaaatcacataattcagtgtaatttt 344  Q
    |||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  38148786 tcgacaccgctaatagtttgagaaaatcacataattcagtgtaatttt 38148739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 13783267 - 13783324
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||| ||||| |||| || ||||||||| |||||| ||||||||||||||    
T  13783267 gacactgacacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaatt 13783324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 18576090 - 18576053
Alignment:
Q  305 gctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  18576090 gctgataatttgagaaaatcacataattcggtgtaatt 18576053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 36635310 - 36635367
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  | ||| | || ||||||||||||||||||||||||||||||||||    
T  36635310 gacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatt 36635367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 19230381 - 19230325
Alignment:
Q  286 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||| ||||| | | ||||||||||||||| |||||||||| |||||||    
T  19230381 acactgacacatggacatagataataatttgagaaaataacataattcaatgtaatt 19230325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 28964312 - 28964264
Alignment:
Q  294 acatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| ||||| ||| ||||||||| ||||||||||||||||||||||||    
T  28964312 acattgacatagctaataatttgaaaaaatcacataattcagtgtaatt 28964264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 40613449 - 40613493
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||    
T  40613449 cgacaccgctaatattttgagaaaatcacataattcagtgtaatt 40613493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 2234258 - 2234293
Alignment:
Q  307 tgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||||| |||||||    
T  2234258 tgataatttgagaaaatcacataattcaatgtaatt 2234293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 342
Target Start/End: Original strand, 16189721 - 16189752
Alignment:
Q  311 aatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||    
T  16189721 aatttgagaaaatcacataattcagtgtaatt 16189752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 266 - 341
Target Start/End: Complemental strand, 31243640 - 31243565
Alignment:
Q  266 atacacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    |||||| ||||| | ||||||||| | ||||||||||    | ||||||||||||||| |||||||||||||||||    
T  31243640 atacacggacacaagacacgacacaggcacatcgacacttataataatttgagaaaatgacataattcagtgtaat 31243565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 342
Target Start/End: Complemental strand, 999410 - 999364
Alignment:
Q  296 atcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||| |||||||||| |||||| |||||| |||||||||    
T  999410 atcgacatcgctaataatttgagtaaatcatataatttagtgtaatt 999364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 34200342 - 34200295
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattca 334  Q
    |||||| ||||||||||  |||| ||||||||||||||||||||||||||    
T  34200342 gacacttacacatcgac--cgctaataatttgagaaaatcacataattca 34200295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 35723458 - 35723400
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaat-cacataattcagtgtaatt 342  Q
    |||||||||||  ||||| |||| ||||||||||||||| ||||||||||| |||||||    
T  35723458 gacactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaatt 35723400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 5775407 - 5775374
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||| |||||||||    
T  5775407 ataatttgagaaaatcacataattaagtgtaatt 5775374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 9996850 - 9996883
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||||| |||||    
T  9996850 ataatttgagaaaatcacataattcagtataatt 9996883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 11596401 - 11596368
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  11596401 ataatttgaaaaaatcacataattcagtgtaatt 11596368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 15029747 - 15029808
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||   ||||  ||| ||||||||| || |||||||||||||||||||||    
T  15029747 acacgacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaatt 15029808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 17425438 - 17425405
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||| |||||||||||||||||    
T  17425438 ataatttgagaaaatcgcataattcagtgtaatt 17425405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 24343517 - 24343550
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||| ||||||||||||||||||    
T  24343517 ataatttgagaaaattacataattcagtgtaatt 24343550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 26504372 - 26504315
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||| |||||||||  ||| ||||||| ||||||||| ||| ||||||||||||    
T  26504372 gacactgaaacatcgacactgctaataatttaagaaaatcaaatagttcagtgtaatt 26504315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 29205454 - 29205487
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  29205454 ataatttgaaaaaatcacataattcagtgtaatt 29205487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 32910561 - 32910594
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||| ||||||||||||||||||    
T  32910561 ataatttgagaaaatgacataattcagtgtaatt 32910594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 54580072 - 54580039
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  54580072 ataatttgaaaaaatcacataattcagtgtaatt 54580039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 56257943 - 56257976
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||| ||||||||||||||||    
T  56257943 ataatttgagaaaatcatataattcagtgtaatt 56257976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 1747211 - 1747255
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| |||| ||||||||||||||||||||||| |||||    
T  1747211 cgacaccgctaataaattgagaaaatcacataattcagtttaatt 1747255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 3064961 - 3064929
Alignment:
Q  310 taatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||| ||||||||||||||    
T  3064961 taatttgagaaaatcacacaattcagtgtaatt 3064929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 8820395 - 8820443
Alignment:
Q  286 acactgacacatcgacatcgctgataatttgagaaaatcacataattca 334  Q
    |||||||||| || |||||| | ||||||||| ||||||||||||||||    
T  8820395 acactgacacgtcaacatcgataataatttgataaaatcacataattca 8820443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 11651207 - 11651155
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtg 337  Q
    ||||||||||| ||||||  ||| ||||||| | |||||||||||||||||||    
T  11651207 gacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 11651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 20743327 - 20743295
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||||||||| |||||||||||||||||    
T  20743327 ataatttgagaaaatgacataattcagtgtaat 20743295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 340
Target Start/End: Complemental strand, 30522961 - 30522933
Alignment:
Q  312 atttgagaaaatcacataattcagtgtaa 340  Q
    |||||||||||||||||||||||||||||    
T  30522961 atttgagaaaatcacataattcagtgtaa 30522933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 46180985 - 46180953
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||||||||| |||||||||||||||||    
T  46180985 ataatttgagaaaataacataattcagtgtaat 46180953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 47263977 - 47264029
Alignment:
Q  290 tgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||| ||||||| ||| ||||||||  ||||||||||||||| ||||||||    
T  47263977 tgacacgtcgacatagctaataatttgtaaaaatcacataattctgtgtaatt 47264029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 23718012 - 23718069
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||    
T  23718012 gacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaatt 23718069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 24105684 - 24105741
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||    
T  24105684 gacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaatt 24105741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 29970626 - 29970566
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||||||||||| |||| |||| |||||||||||||||| |||| |||||||||||    
T  29970626 acacgacactgacacattgacaccgctaataatttgagaaaatcgcatagttcagtgtaat 29970566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 21616748 - 21616805
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||||  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  21616748 gacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 21616805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 31808063 - 31808120
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||| ||||| |||| ||||||| | ||||||||||||||||||||||||    
T  31808063 gacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaatt 31808120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 21782890 - 21782834
Alignment:
Q  286 acactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||  |||||  ||| ||||||||||||||||||||||||||||||||||    
T  21782890 acactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaatt 21782834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 21091709 - 21091766
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||| ||||| |||| ||||||| ||||||| ||||| ||||||||||||    
T  21091709 gacactgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaatt 21091766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 22084899 - 22084846
Alignment:
Q  291 gacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatttt 344  Q
    |||||||| ||| || | ||||||||||||||||| ||||||||||||||||||    
T  22084899 gacacatcaacaccgttaataatttgagaaaatcatataattcagtgtaatttt 22084846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 30717603 - 30717546
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||| | |||||  ||| ||||||||| ||||||||||||||||||||||||    
T  30717603 gacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaatt 30717546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 39323250 - 39323307
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||| || |||||| |||| ||||||||| ||||| ||||||||||||||||||    
T  39323250 gacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaatt 39323307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 44860297 - 44860363
Alignment:
Q  274 acaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||| ||||||||| |||||   |||| |||| |||||||||||||||| |||||||||||||||||    
T  44860297 acaccagacacgacacggacact--gacaccgctaataatttgagaaaatcgcataattcagtgtaatt 44860363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 18276520 - 18276564
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||    
T  18276520 cgacaccgctaataatttgagaaaatcacttaattcagtgtaatt 18276564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 28677908 - 28677952
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||    
T  28677908 cgacaccgctaataatttgaaaaaatcacataattcagtgtaatt 28677952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 31461422 - 31461334
Alignment:
Q  152 atttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaag 240  Q
    |||||||||| | ||| ||||||||||| |||||  |||||||||| ||||| || ||||  ||||||| ||| |||| ||||||||||    
T  31461422 atttgactttattttatcttttgttatagaaatagcttatatataaccacttatatgatatacgtttatgctagaagtgcttaattaag 31461334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 36409687 - 36409643
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||||||||||||| |||||||||||||| |||||||||    
T  36409687 cgacaccgctgataatttgaaaaaatcacataatttagtgtaatt 36409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 37411304 - 37411264
Alignment:
Q  298 cgacatcgctgataatttgagaaaatcacataattcagtgt 338  Q
    ||||| |||| ||||||||||||||||||||||||||||||    
T  37411304 cgacaccgctaataatttgagaaaatcacataattcagtgt 37411264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 341
Target Start/End: Complemental strand, 18889674 - 18889608
Alignment:
Q  274 acaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    |||||| ||||||||| |||||  ||||  |||| |||| ||||||||||||||||||||||||||||    
T  18889674 acaccagacacgacacggacacg-cgacgccgctaataaattgagaaaatcacataattcagtgtaat 18889608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 33192176 - 33192089
Alignment:
Q  153 tttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaag 240  Q
    ||||||||| | ||| ||| ||||||| ||||| ||| |||||||||||||||  |||||| |||||| || ||||  ||||||||||    
T  33192176 tttgactttattttatcttatgttatagaaatagtttttatataagcacttgtgtgataagagtttatgctttaagcgcttaattaag 33192089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 42832343 - 42832292
Alignment:
Q  291 gacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||| ||||| |||| ||||||||||||||| ||||| ||||||||||||    
T  42832343 gacacaccgacaccgctaataatttgagaaaattacatatttcagtgtaatt 42832292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 339
Target Start/End: Original strand, 2331804 - 2331834
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgta 339  Q
    |||||||||||||||||||||||||||||||    
T  2331804 ataatttgagaaaatcacataattcagtgta 2331834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 28803593 - 28803679
Alignment:
Q  153 tttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaa 239  Q
    ||||||||| | ||| ||||||||||  |||||  |||||||||||||||| || ||||||| ||||| | ||||  ||||||||||    
T  28803593 tttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgataagcatttatgccataaacacttaattaa 28803679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 5367202 - 5367235
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||| |||||||||||||||||||||||    
T  5367202 ataatttgaggaaatcacataattcagtgtaatt 5367235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 341
Target Start/End: Original strand, 12748653 - 12748726
Alignment:
Q  268 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    |||||||||||  ||||||||| |||||   ||||| | | ||||||||||||||| ||||| |||||||||||    
T  12748653 acacagacaccggacacgacacggacacgctgacatggataataatttgagaaaatgacatagttcagtgtaat 12748726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 15173493 - 15173420
Alignment:
Q  169 cttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaagat 242  Q
    ||||||||||| |||||  ||||| |||  |||||||||||||||||||||| |||| |   ||||||||||||    
T  15173493 cttttgttatagaaataacttatacatagacacttgtacgataagcgtttatgctatcaacgcttaattaagat 15173420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 20539747 - 20539690
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||| ||||||  ||| ||||||||| ||||||| |||||| |||||||||    
T  20539747 gacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaatt 20539690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 23921263 - 23921296
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||| ||||||||||||||||||    
T  23921263 ataatttgagaaaattacataattcagtgtaatt 23921296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 340
Target Start/End: Complemental strand, 24975399 - 24975343
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaa 340  Q
    |||||||||||||||   |||| |||| ||||||||||||||||  ||||||||||||||    
T  24975399 acacgacactgacac---gacaccgctaataatttgagaaaatcgtataattcagtgtaa 24975343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 25846751 - 25846784
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||| |||||||||||||    
T  25846751 ataatttgagaaaatcacatgattcagtgtaatt 25846784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 28412360 - 28412393
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  28412360 ataatttgataaaatcacataattcagtgtaatt 28412393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 30404923 - 30404866
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||  | | ||||||||| ||||||||||||||||||||||||    
T  30404923 gacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaatt 30404866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 35449523 - 35449556
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||| ||||||||||||||    
T  35449523 ataatttgagaaaatcacagaattcagtgtaatt 35449556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 37419729 - 37419786
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||| ||  ||||||||| ||||||||| ||||||||||||||    
T  37419729 gacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaatt 37419786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 38117236 - 38117175
Alignment:
Q  281 acacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||  |||||  ||| ||||||||| ||||||||||| ||| ||||||||    
T  38117236 acacgacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaatt 38117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 10535808 - 10535776
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||||||||| |||||||||||||||||    
T  10535808 ataatttgagaaaatgacataattcagtgtaat 10535776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 17520119 - 17520087
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||| |||||||||||||||||||||||||    
T  17520119 ataatttaagaaaatcacataattcagtgtaat 17520087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 27447066 - 27447030
Alignment:
Q  306 ctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  27447066 ctgataatttgagaagatcccataattcagtgtaatt 27447030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 33197342 - 33197402
Alignment:
Q  169 cttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagt 229  Q
    ||||||||||| |||||  ||||| |||||||||| || |||||||||||||  |||||||    
T  33197342 cttttgttatagaaatagcttatagataagcacttatatgataagcgtttatgttataagt 33197402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 36281695 - 36281727
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaat 341  Q
    |||||||||||||||||||||||| ||||||||    
T  36281695 ataatttgagaaaatcacataatttagtgtaat 36281727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 1161 - 1248
Alignment:
Q  153 tttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaag 240  Q
    ||||||||| | ||| ||||||||||| |||||  ||||| |||||||||| || ||||  ||||||| |||||||||||||||||||    
T  1161 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaag 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 2814 - 2727
Alignment:
Q  153 tttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttatcctataagtacttaattaag 240  Q
    ||||||||| | ||| ||||||||||| |||||  ||||| |||||||||| || ||||  ||||||| |||||||||||||||||||    
T  2814 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaattaag 2727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 19040341 - 19040395
Alignment:
Q  288 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 19040395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 7265666 - 7265609
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  | ||| |||| ||||||||||||||||||||||||||||||||||    
T  7265666 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaatt 7265609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 9658865 - 9658922
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||||| |||| ||||||| ||||||||||||||||||||||||||    
T  9658865 gacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaatt 9658922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 13851722 - 13851779
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||| |||||| |||| ||||||||||||||| || |||||||||||||||    
T  13851722 gacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaatt 13851779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 342
Target Start/End: Complemental strand, 34073405 - 34073363
Alignment:
Q  300 acatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  34073405 acatcgctaataatttgagaaaatctcataattcagtgtaatt 34073363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 9025543 - 9025510
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||||    
T  9025543 ataatttgagaaaatcacataattcagtgtaatt 9025510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 9027164 - 9027221
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||||| |||| ||||||||||| ||||||||||||| ||||||||    
T  9027164 gacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaatt 9027221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 16766683 - 16766740
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||  ||| ||||||||| ||||||||||||||||||||||||    
T  16766683 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 16766740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 30866217 - 30866160
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||||| | ||| |||| |||||||||||||||||||||||||| |||||||    
T  30866217 gacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaatt 30866160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 31579274 - 31579241
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||||    
T  31579274 ataatttgagaaaatcacataattcagtgtaatt 31579241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 5000696 - 5000640
Alignment:
Q  288 actgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatttt 344  Q
    |||||||| |||||| |||| |||||| ||||||||||||| ||||||| |||||||    
T  5000696 actgacacgtcgacaccgctaataattcgagaaaatcacatgattcagtataatttt 5000640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 13360420 - 13360388
Alignment:
Q  310 taatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||||||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaatt 13360388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 6665180 - 6665256
Alignment:
Q  270 acagacaccaaacacgacactgacacat----cgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| |||||||||| |||||||    ||| | |||| |||||||||| |||||||||||||||| ||||||    
T  6665180 acagacaccgaacacgacacggacacatacgccgaaaccgctaataatttgagtaaatcacataattcagagtaatt 6665256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 342
Target Start/End: Original strand, 7377951 - 7378022
Alignment:
Q  271 cagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||  |||| |||| |||||  ||||| |||| | |||||||||||||||||||||||| |||||||    
T  7377951 cagacaccggacacaacacagacaccccgacaccgctaaaaatttgagaaaatcacataattcaatgtaatt 7378022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 342
Target Start/End: Complemental strand, 11591917 - 11591886
Alignment:
Q  311 aatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaatt 11591886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 17341735 - 17341680
Alignment:
Q  287 cactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||  ||||| || | ||||||||| ||||||||||||||||||||||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaatt 17341680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 342
Target Start/End: Original strand, 26562701 - 26562732
Alignment:
Q  311 aatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaatt 26562732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 32511725 - 32511682
Alignment:
Q  299 gacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||    
T  32511725 gacaccgctaataatttaagaaaatcacataattcagtgtaatt 32511682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 5970198 - 5970124
Alignment:
Q  268 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||| ||||||  ||| ||||| ||||| ||||||  | | ||||||||| ||||||||||||||||||||||||    
T  5970198 acacggacaccggacatgacacggacacgtcgacacagttaataatttgaaaaaatcacataattcagtgtaatt 5970124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 5462696 - 5462729
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||| |||||||    
T  5462696 ataatttgagaaaatcacataattcattgtaatt 5462729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 5732583 - 5732526
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||||| || | ||||||||||||||||||||| || |||||||||    
T  5732583 gacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaatt 5732526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 7086805 - 7086838
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||| |||||||||    
T  7086805 ataatttgagaaaatcacataatttagtgtaatt 7086838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 7569217 - 7569184
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||| ||||||||||||||||||    
T  7569217 ataatttgagaaaattacataattcagtgtaatt 7569184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 7996427 - 7996394
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||| ||||||||||||||||    
T  7996427 ataatttgagaaaatcatataattcagtgtaatt 7996394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 8022374 - 8022407
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||| ||||||||||||||||    
T  8022374 ataatttgagaaaatcatataattcagtgtaatt 8022407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 8805621 - 8805588
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||| |||||||||    
T  8805621 ataatttgagaaaatcacataatttagtgtaatt 8805588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 9617444 - 9617477
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||| |||||||    
T  9617444 ataatttgagaaaatcacataattcaatgtaatt 9617477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 9629393 - 9629426
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||||||||||| |||||||    
T  9629393 ataatttgagaaaatcacataattcaatgtaatt 9629426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 10770723 - 10770690
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  10770723 ataatttgaaaaaatcacataattcagtgtaatt 10770690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 10889047 - 10888994
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgt 338  Q
    ||||| ||||||| |||| |||| ||||||||| |||||||||||||| |||||    
T  10889047 gacaccgacacatagacaccgctaataatttgataaaatcacataatttagtgt 10888994  T

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Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 12696310 - 12696367
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||  ||| ||||||||| ||||| ||||||||||||||||||    
T  12696310 gacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatt 12696367  T

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Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 16388282 - 16388249
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  16388282 ataatttgaaaaaatcacataattcagtgtaatt 16388249  T

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Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 17435185 - 17435242
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||| || ||||||| ||| ||||||| | ||||| ||||||||||||||||||    
T  17435185 gacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaatt 17435242  T

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Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 17841662 - 17841605
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||  ||| ||||||||| |||||||||||||| |||||||||    
T  17841662 gacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatt 17841605  T

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Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 28152085 - 28152141
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||  ||| ||||||||| ||||||||||||||||||||||||    
T  28152085 gacactgacacgccgacaaagctaataatttga-aaaatcacataattcagtgtaatt 28152141  T

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Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 31384930 - 31384963
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  31384930 ataatttgaaaaaatcacataattcagtgtaatt 31384963  T

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Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 34595144 - 34595177
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  34595144 ataatttgaaaaaatcacataattcagtgtaatt 34595177  T

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Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 340
Target Start/End: Complemental strand, 2140571 - 2140499
Alignment:
Q  268 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaa 340  Q
    |||| ||||||||| || ||||  | |||||||||| | | ||||||||||||||| |||||||||| |||||    
T  2140571 acacggacaccaaatacaacacaaatacatcgacattgataataatttgagaaaatgacataattcaatgtaa 2140499  T

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Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 338
Target Start/End: Complemental strand, 10339174 - 10339146
Alignment:
Q  310 taatttgagaaaatcacataattcagtgt 338  Q
    |||||||||||||||||||||||||||||    
T  10339174 taatttgagaaaatcacataattcagtgt 10339146  T

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Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 10842518 - 10842574
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||| |||||  ||||| |||| ||||||||| |||||||||||||| ||||||||    
T  10842518 gacacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaat 10842574  T

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Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 13364754 - 13364722
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||||||||||| |||||||||||||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaat 13364722  T

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Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 15443682 - 15443730
Alignment:
Q  286 acactgacacatcgacatcgctgataatttgagaaaatcacataattca 334  Q
    |||||||||| ||||||||  | ||||||||||||||| ||||||||||    
T  15443682 acactgacacgtcgacatcaataataatttgagaaaataacataattca 15443730  T

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Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 22742350 - 22742282
Alignment:
Q  152 atttgactttttcttagcttttgttatacaaatattttatatataagcacttgtacgataagcgtttat 220  Q
    |||||||||| | ||| | |||||||||||||||  ||||| ||||| |||| ||||||||||| ||||    
T  22742350 atttgactttattttatcctttgttatacaaatagcttatagataagaacttatacgataagcgcttat 22742282  T

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Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 34446575 - 34446607
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaat 341  Q
    ||||||||||||||| |||||||||||||||||    
T  34446575 ataatttgagaaaatgacataattcagtgtaat 34446607  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 92793 - 92850
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  92793 gacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaatt 92850  T

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Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 51797 - 51854
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||  ||| ||||||||| ||||||||||||||||||||||||    
T  51797 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 51854  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 53190 - 53223
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||||||||||||||||||||    
T  53190 ataatttgagaaaatcacataattcagtgtaatt 53223  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 18198 - 18125
Alignment:
Q  268 acacagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaat 341  Q
    |||| ||||||| ||||||||||||||| |||||| || | | | ||||||||||| |||||||||| ||||||    
T  18198 acacggacaccagacacgacactgacacgtcgacaccgataaaattttgagaaaataacataattcaatgtaat 18125  T

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Target: scaffold0123 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 44613 - 44541
Alignment:
Q  270 acagacaccaaacacgacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||| ||||||||  ||||    |||| |||| | ||||||||||||||||||||||||||||||||    
T  44613 acagacaccagacacgacagggacaagctgacaccgctaaaaatttgagaaaatcacataattcagtgtaatt 44541  T

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Target: scaffold1528 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 1025 - 1076
Alignment:
Q  289 ctgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaa 340  Q
    |||||||| ||||| |||| ||||||||| ||||| ||||||||||||||||    
T  1025 ctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaa 1076  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 135378 - 135328
Alignment:
Q  292 acacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||| |||||  ||| ||||||||||||||||||||||||| ||||||||    
T  135378 acacaccgacactgctaataatttgagaaaatcacataattctgtgtaatt 135328  T

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Target: scaffold0361 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 14540 - 14573
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  14540 ataatttgaaaaaatcacataattcagtgtaatt 14573  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 13386 - 13443
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||   || ||||||||||||||||||||||||||||| ||||    
T  13386 gacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatt 13443  T

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Target: scaffold0223 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 20182 - 20215
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  20182 ataatttgaaaaaatcacataattcagtgtaatt 20215  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 21941 - 21884
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  |||||   || ||||||||||||||||||||||||||||| ||||    
T  21941 gacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatt 21884  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 26379 - 26428
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattca 334  Q
    |||| |||||| |||||| | || ||||||||||||||||||||||||||    
T  26379 gacagtgacacgtcgacaccactaataatttgagaaaatcacataattca 26428  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 9796 - 9763
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||||||| |||||||||||||||    
T  9796 ataatttgagaaaatcacttaattcagtgtaatt 9763  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 46692 - 46725
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||| ||||||||||||||||||||||||    
T  46692 ataatttgaaaaaatcacataattcagtgtaatt 46725  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 90853 - 90886
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    ||||||||||||||||| ||||||||||||||||    
T  90853 ataatttgagaaaatcatataattcagtgtaatt 90886  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 192322 - 192265
Alignment:
Q  285 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||  ||||| || | ||||||||||||||| ||||||||| ||||||||    
T  192322 gacactgacacgccgacaccgttaataatttgagaaaattacataattcggtgtaatt 192265  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 263421 - 263388
Alignment:
Q  309 ataatttgagaaaatcacataattcagtgtaatt 342  Q
    |||||||||||||| |||||||||||||||||||    
T  263421 ataatttgagaaaaccacataattcagtgtaatt 263388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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