View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8902A_low_57 (Length: 379)
Name: NF8902A_low_57
Description: NF8902A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8902A_low_57 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 8 - 379
Target Start/End: Original strand, 41333123 - 41333494
Alignment:
| Q |
8 |
gaaatgaacgttacatatcatatctttttcttagtaatttcaaatgtttccacgttcttattaattgctttacttaaagaagtagggaagaaaactataa |
107 |
Q |
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| T |
41333123 |
gaaatgaacgttacatatcatatctttttcttagtaatttcaaatgtttccacgttcttattaattgctttacttaaagaagtagggaagaaaactataa |
41333222 |
T |
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| Q |
108 |
gtaactaagatgcttgttaagattcggcgttagcaatttacattttgggagagtccacataatttgaaagttaagctcatatagcatatattcggtaatg |
207 |
Q |
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| T |
41333223 |
gtaactaagatgctcgttaagattcggcgttagcaatttacattttgggagagtccacataatttgaaagttaagctcatataacatatattcggtaatg |
41333322 |
T |
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| Q |
208 |
taatgaggcccgcaataaggactaccgtcaactaagagcatatgtctcaacaaacattgattattgttgttgatttgggacatggatgccccttatatct |
307 |
Q |
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| T |
41333323 |
taatgaggcccgcaatagggactaccgtcaactaagagcatatgtctcaaaaaacattgattattgttgttgatttgggacatggatgacccttttatat |
41333422 |
T |
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| Q |
308 |
ttatttatcctaacttttcttatctaattacctatttggtttcctgcgtacttggcctcttatactactttg |
379 |
Q |
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| T |
41333423 |
ttatttatgctaacttttcttatctaattaactatttggttttctgcgaaattggactcttatactaatttg |
41333494 |
T |
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