View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8902A_low_78 (Length: 353)
Name: NF8902A_low_78
Description: NF8902A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8902A_low_78 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 99 - 353
Target Start/End: Complemental strand, 2282270 - 2282016
Alignment:
| Q |
99 |
ctgacgcaattaactccttattctaagaatttgactcttatatgtaaacattattttggtgttaataattttgcagtatgtggtactagctccttgggtg |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2282270 |
ctgacgcaattaactccttattctaagaatttgactcttatatgtaaacattattttggtgttaataattttgcagtatgtggtactagctccttgggtg |
2282171 |
T |
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| Q |
199 |
attcacagcacatattctttgatagtgaaggataagagtgaaagggatgtatctacatttctcatatttccatttttgctatggcgtgttcttcataatc |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2282170 |
attcacagcacatattctttgatagtgaaggataagagtgaaagggatgtatctacatttctcatatttccatttttgctatggcgtgttcttcataatc |
2282071 |
T |
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| Q |
299 |
agatatggatatctctctctcgttatagaacttccaaaggcaacaatagaattct |
353 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2282070 |
agatatggatatctctctctcgttatagaacttccaaaggcaacaatagaattct |
2282016 |
T |
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