View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8902A_low_88 (Length: 345)

Name: NF8902A_low_88
Description: NF8902A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8902A_low_88
NF8902A_low_88
[»] chr1 (27 HSPs)
chr1 (7-201)||(50767536-50767747)
chr1 (202-344)||(20302198-20302341)
chr1 (202-342)||(13761577-13761717)
chr1 (202-344)||(51752104-51752247)
chr1 (202-344)||(51749778-51749921)
chr1 (210-344)||(16225895-16226029)
chr1 (202-344)||(47179428-47179570)
chr1 (202-344)||(47177078-47177219)
chr1 (230-344)||(6823651-6823766)
chr1 (202-319)||(6822775-6822893)
chr1 (235-342)||(28840451-28840558)
chr1 (235-342)||(28842266-28842373)
chr1 (202-340)||(23783238-23783376)
chr1 (202-344)||(10400227-10400369)
chr1 (201-307)||(20291279-20291386)
chr1 (235-344)||(15823319-15823428)
chr1 (230-319)||(16231369-16231458)
chr1 (235-342)||(13214854-13214961)
chr1 (235-344)||(3580017-3580126)
chr1 (202-284)||(47451405-47451488)
chr1 (305-344)||(23783362-23783401)
chr1 (255-344)||(30790793-30790882)
chr1 (235-319)||(49687334-49687418)
chr1 (254-344)||(39462310-39462400)
chr1 (235-284)||(38925915-38925965)
chr1 (295-344)||(13449947-13449996)
chr1 (259-343)||(41646717-41646801)
[»] chr2 (17 HSPs)
chr2 (210-344)||(19502408-19502542)
chr2 (210-344)||(27104523-27104657)
chr2 (201-344)||(19504742-19504885)
chr2 (202-344)||(24162609-24162752)
chr2 (202-344)||(36559216-36559358)
chr2 (202-340)||(36561539-36561677)
chr2 (202-344)||(45332533-45332675)
chr2 (235-344)||(21521092-21521201)
chr2 (235-344)||(42064264-42064373)
chr2 (210-319)||(43623968-43624077)
chr2 (235-344)||(6259212-6259321)
chr2 (294-344)||(13910441-13910491)
chr2 (235-344)||(22407806-22407915)
chr2 (305-344)||(36561493-36561532)
chr2 (254-319)||(6264546-6264611)
chr2 (235-320)||(40032468-40032553)
chr2 (305-340)||(36561518-36561553)
[»] chr4 (35 HSPs)
chr4 (204-344)||(51015042-51015182)
chr4 (202-344)||(11006638-11006781)
chr4 (202-344)||(9176893-9177035)
chr4 (210-344)||(37089771-37089906)
chr4 (202-344)||(16932218-16932360)
chr4 (200-344)||(16934572-16934716)
chr4 (200-344)||(22783175-22783319)
chr4 (202-344)||(36919984-36920125)
chr4 (202-344)||(9174543-9174684)
chr4 (202-344)||(22780810-22780952)
chr4 (210-342)||(24888598-24888730)
chr4 (202-342)||(5637867-5638006)
chr4 (202-344)||(3824970-3825112)
chr4 (202-344)||(38408993-38409135)
chr4 (202-319)||(7941133-7941251)
chr4 (235-342)||(22044788-22044897)
chr4 (204-344)||(22803130-22803270)
chr4 (199-343)||(36921893-36922036)
chr4 (202-319)||(11434769-11434887)
chr4 (202-344)||(18846923-18847067)
chr4 (239-344)||(31849996-31850101)
chr4 (259-343)||(11008990-11009075)
chr4 (235-340)||(9148087-9148192)
chr4 (235-319)||(22801262-22801346)
chr4 (254-344)||(5198266-5198356)
chr4 (235-344)||(48486146-48486255)
chr4 (235-340)||(52942869-52942974)
chr4 (289-342)||(22047083-22047135)
chr4 (233-343)||(40091813-40091923)
chr4 (235-285)||(22048492-22048542)
chr4 (256-344)||(24880299-24880387)
chr4 (255-341)||(24878836-24878922)
chr4 (256-344)||(619844-619932)
chr4 (295-344)||(16689331-16689380)
chr4 (296-344)||(8529012-8529060)
[»] chr3 (31 HSPs)
chr3 (202-342)||(6063866-6064006)
chr3 (202-344)||(22114700-22114842)
chr3 (202-344)||(18099565-18099707)
chr3 (201-344)||(50493675-50493818)
chr3 (202-344)||(38210067-38210209)
chr3 (218-331)||(10192401-10192513)
chr3 (202-343)||(53896613-53896754)
chr3 (219-344)||(5899476-5899601)
chr3 (203-344)||(5191374-5191515)
chr3 (218-331)||(10085481-10085593)
chr3 (202-333)||(18097291-18097422)
chr3 (201-319)||(38889756-38889875)
chr3 (202-344)||(5885983-5886126)
chr3 (259-344)||(25388654-25388739)
chr3 (202-319)||(35777163-35777280)
chr3 (235-319)||(11162924-11163008)
chr3 (261-344)||(10956422-10956505)
chr3 (235-342)||(1321194-1321301)
chr3 (235-342)||(26720301-26720408)
chr3 (235-344)||(5523010-5523119)
chr3 (235-317)||(11170178-11170260)
chr3 (201-344)||(32264438-32264581)
chr3 (202-319)||(6719532-6719651)
chr3 (202-285)||(7606880-7606963)
chr3 (295-344)||(10958718-10958767)
chr3 (260-319)||(6066195-6066254)
chr3 (235-344)||(24177032-24177141)
chr3 (304-344)||(3859350-3859390)
chr3 (200-250)||(3859315-3859365)
chr3 (295-344)||(45882752-45882801)
chr3 (295-344)||(4308676-4308725)
[»] scaffold0127 (1 HSPs)
scaffold0127 (202-344)||(12912-13054)
[»] chr5 (34 HSPs)
chr5 (202-344)||(34477490-34477632)
chr5 (202-319)||(2174680-2174797)
chr5 (235-344)||(38881878-38881987)
chr5 (202-344)||(10749505-10749647)
chr5 (202-344)||(31544798-31544940)
chr5 (210-344)||(4236378-4236512)
chr5 (202-344)||(10756960-10757102)
chr5 (202-344)||(15354923-15355065)
chr5 (202-344)||(15357199-15357341)
chr5 (202-344)||(31542442-31542584)
chr5 (202-319)||(34479855-34479972)
chr5 (202-319)||(39797849-39797966)
chr5 (201-319)||(25921874-25921993)
chr5 (235-344)||(16775930-16776039)
chr5 (201-344)||(23664833-23664976)
chr5 (201-344)||(23793611-23793754)
chr5 (202-344)||(23667109-23667251)
chr5 (259-344)||(31179812-31179897)
chr5 (235-319)||(659746-659829)
chr5 (202-319)||(38960487-38960604)
chr5 (293-344)||(21684858-21684909)
chr5 (257-337)||(659850-659929)
chr5 (200-300)||(18186489-18186589)
chr5 (235-342)||(21947803-21947910)
chr5 (202-319)||(31466379-31466496)
chr5 (235-319)||(2818729-2818813)
chr5 (235-338)||(20504316-20504419)
chr5 (202-266)||(21684905-21684969)
chr5 (202-300)||(36402747-36402845)
chr5 (295-344)||(39854317-39854366)
chr5 (295-344)||(42238047-42238096)
chr5 (295-343)||(1240171-1240219)
chr5 (235-318)||(12556325-12556408)
chr5 (202-250)||(31179885-31179933)
[»] chr8 (15 HSPs)
chr8 (202-344)||(18812668-18812810)
chr8 (202-344)||(43079347-43079489)
chr8 (202-341)||(43081722-43081861)
chr8 (202-344)||(18810483-18810625)
chr8 (235-344)||(27826815-27826924)
chr8 (235-344)||(27829126-27829235)
chr8 (235-342)||(12517425-12517532)
chr8 (202-344)||(44720617-44720760)
chr8 (210-344)||(14807556-14807690)
chr8 (235-340)||(28251988-28252093)
chr8 (210-344)||(15067785-15067919)
chr8 (202-344)||(15072506-15072648)
chr8 (230-319)||(3886322-3886412)
chr8 (235-319)||(4423868-4423952)
chr8 (305-344)||(28251963-28252002)
[»] chr6 (15 HSPs)
chr6 (202-344)||(26068740-26068882)
chr6 (202-344)||(14507572-14507716)
chr6 (202-344)||(26066469-26066611)
chr6 (202-344)||(33308685-33308827)
chr6 (202-344)||(33310954-33311096)
chr6 (235-344)||(19227806-19227915)
chr6 (202-344)||(29755137-29755279)
chr6 (235-344)||(8995288-8995397)
chr6 (235-344)||(9019735-9019844)
chr6 (210-344)||(11983426-11983558)
chr6 (259-342)||(4816666-4816749)
chr6 (235-342)||(15530521-15530628)
chr6 (295-344)||(26084818-26084867)
chr6 (285-344)||(30729225-30729284)
chr6 (254-319)||(32279845-32279910)
[»] chr7 (19 HSPs)
chr7 (202-344)||(1047361-1047503)
chr7 (202-341)||(3878322-3878461)
chr7 (202-344)||(2935070-2935212)
chr7 (202-344)||(9027545-9027687)
chr7 (202-344)||(22136878-22137020)
chr7 (202-344)||(40551905-40552047)
chr7 (202-344)||(22107867-22108009)
chr7 (202-344)||(40549627-40549769)
chr7 (202-319)||(40837144-40837261)
chr7 (201-344)||(27306626-27306768)
chr7 (235-344)||(35412-35521)
chr7 (239-344)||(25542317-25542422)
chr7 (202-319)||(26804345-26804462)
chr7 (235-344)||(44347-44456)
chr7 (235-316)||(1049699-1049780)
chr7 (235-344)||(18567396-18567505)
chr7 (235-344)||(31435444-31435553)
chr7 (295-344)||(40946167-40946216)
chr7 (289-341)||(42006404-42006456)
[»] scaffold0140 (2 HSPs)
scaffold0140 (202-344)||(21915-22057)
scaffold0140 (202-344)||(24190-24332)
[»] scaffold0472 (1 HSPs)
scaffold0472 (202-344)||(5927-6069)
[»] scaffold0025 (2 HSPs)
scaffold0025 (210-342)||(69693-69825)
scaffold0025 (210-319)||(73427-73536)
[»] scaffold0250 (1 HSPs)
scaffold0250 (243-344)||(2670-2771)
[»] scaffold0068 (2 HSPs)
scaffold0068 (293-344)||(29001-29052)
scaffold0068 (202-266)||(28941-29005)
[»] scaffold0131 (1 HSPs)
scaffold0131 (203-344)||(14768-14910)


Alignment Details
Target: chr1 (Bit Score: 131; Significance: 6e-68; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 50767536 - 50767747
Alignment:
Q  7 gataatgaaatatgaatgaatggaatgagatagatggtgcatttttaaattgtacagatgaaaacaaaagacaaatggaataaggacgaaatattcatga 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50767536 gataatgaaatatgaatgaatggaatgagatagatggtgcatttttaaattgtacagatgaaaacaaaagacaaatggaataaggacgaaatattcatga 50767635  T
Q  107 aaaata-----------------tcacaagggataccgtcataacatgttacattagtagnnnnnnngtaaattcacaaacatctttctctaactatata 189  Q
    ||||||                 ||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||    
T  50767636 aaaatatctctctcaggacgccttcacaagggataccgtcataacatgttacattactagtttttttgtaaattcacaaacatctttctctaactatata 50767735  T
Q  190 aaagttaattaa 201  Q
    ||||||||||||    
T  50767736 aaagttaattaa 50767747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 20302198 - 20302341
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20302198 tgtgagagttaacttaaaatcagatttctgcagaatcgcggcatgatggcaaggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 20302297  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  20302298 aaaaattgtggcacgatggggtcgcatcgtggcacgatggtgcg 20302341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 202 - 342
Target Start/End: Original strand, 13761577 - 13761717
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13761577 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcatgatggaggtttcagtttttgaggcaaggcactgga 13761676  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtg 342  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  13761677 aaaatcgtggcacgatggggtcgcatcgcggcacgatggtg 13761717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 51752104 - 51752247
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttt-tgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51752104 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggttgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 51752203  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  51752204 aaaaatcgtggcacgatggggccgcatcgtggcacgatggtgcg 51752247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 51749778 - 51749921
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttt-tgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||  ||| |||| ||||||||||||||||   |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  51749778 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacgatggttgggcaacgtggtacgatggaggtttcagttttttgaggcaaggcactgg 51749877  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  51749878 aaaaatcgtggcacgatggggtcgcatcgtggcacgatagtgcg 51749921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 210 - 344
Target Start/End: Original strand, 16225895 - 16226029
Alignment:
Q  210 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 309  Q
    ||||||| ||||||| ||| |||| ||||||||||||| ||   |||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  16225895 ttaacttaaaatcaggtttctgcagaatcgtggcacgacggttgggcaacgtggcacgatggaggttttagttttttgggcaaggcactggaaaaatcgt 16225994  T
Q  310 ggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||    
T  16225995 ggcacgatggggtcgcatcgtggcacgatggtgcg 16226029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 47179428 - 47179570
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  |||||||||||| |    
T  47179428 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgaa 47179527  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  47179528 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcg 47179570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 47177078 - 47177219
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| | |  |||||||||||||||||||||||| |||||||| |||||| |||||||    
T  47177078 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacgactgggcaacgtggcacgatggaggttttagtttttg-ggcaagacactgga 47177176  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  47177177 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcg 47177219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 230 - 344
Target Start/End: Original strand, 6823651 - 6823766
Alignment:
Q  230 tgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttt-tgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatc 328  Q
    |||| |||| |||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  6823651 tgcagaatcatggcacgatggttgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactggaaaaatcgtggcatgatggggtcgcatc 6823750  T
Q  329 gtggcacgatggtgcg 344  Q
    ||||||||||||||||    
T  6823751 gtggcacgatggtgcg 6823766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 6822775 - 6822893
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6822775 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 6822874  T
Q  301 aaaaatcgtggcacgatgg 319  Q
    |||||||||||||||||||    
T  6822875 aaaaatcgtggcacgatgg 6822893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 235 - 342
Target Start/End: Original strand, 28840451 - 28840558
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  28840451 aatcgtggcacgatggcaaggcaacgtggcacgattggaggtttcagttttt-aggcaaggtactggaaaaattgtggcacgatgggatcgcatcgtggc 28840549  T
Q  334 acgatggtg 342  Q
    |||||||||    
T  28840550 acgatggtg 28840558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 235 - 342
Target Start/End: Original strand, 28842266 - 28842373
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  28842266 aatcgtggcacgatggcaaggctacgtggcacgattggaggtttcagttttt-aggcaaggtactggaaaaatcgtggcacgatgggatcgcatcgtggc 28842364  T
Q  334 acgatggtg 342  Q
    |||||||||    
T  28842365 acgatggtg 28842373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 340
Target Start/End: Original strand, 23783238 - 23783376
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  23783238 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 23783337  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatgg 340  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23783338 aaaatcgtggcacgatggggtcgcatcgtggcacgatgg 23783376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 10400369 - 10400227
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||| ||| |||  |||||||||||||| ||  |||||||||||||||| ||||||||||  ||| ||||||| |||||||    
T  10400369 tgtgagagttaacttaaaatcaggtttctgcggaatcgtggcacgattgctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactgg 10400271  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||| ||||||||||||||||||||||||||||||||||||||||    
T  10400270 aaatatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 10400227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 20291279 - 20291386
Alignment:
Q  201 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactg 299  Q
    |||||||| ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  20291279 atgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatggcaaggcaacgtggcacggtggaggtttcagttttttgaggcatggcactg 20291378  T
Q  300 gaaaaatc 307  Q
    ||||||||    
T  20291379 gaaaaatc 20291386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 15823319 - 15823428
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||  ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  15823319 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactagaaaaatcgtggcacgatggggtcgcatcgtggc 15823417  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  15823418 acgatggtgcg 15823428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 230 - 319
Target Start/End: Original strand, 16231369 - 16231458
Alignment:
Q  230 tgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 319  Q
    |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||    
T  16231369 tgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaagacactggaaaaatcgtggcacgatgg 16231458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 342
Target Start/End: Original strand, 13214854 - 13214961
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    ||||||||||||||||   ||||||||||||||| |||||||||||| |||||||||||| |||||||    |||||||| |||||| | ||| ||||||    
T  13214854 aatcgtggcacgatggttgggcaacgtggcacgattggaggtttcag-ttttgaggcaagtcactggatttttcgtggcatgatgggattgcaacgtggc 13214952  T
Q  334 acgatggtg 342  Q
    |||||||||    
T  13214953 acgatggtg 13214961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 344
Target Start/End: Complemental strand, 3580126 - 3580017
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||| ||| ||||||||| ||| || ||| ||||||||| | |||||||| || |||||||||||||| ||| |||| | ||| ||||||    
T  3580126 aatcgtggcacgattgcagggcaacgtgacacaattggatgtttcagttat-gaggcaagtcattggaaaaatcgtggtacggtgggattgcaacgtggc 3580028  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  3580027 acgatggtgcg 3580017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 47451405 - 47451488
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgca-taatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttt 284  Q
    ||||||| ||||||||||||||||||| ||||  |||||||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  47451405 tgtgagagttaacttcaaatcagattt-tgcagaaatcgtggcacgatggctgggcaatgtggcacgattggaggtttcagtttt 47451488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 305 - 344
Target Start/End: Original strand, 23783362 - 23783401
Alignment:
Q  305 atcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23783362 atcgtggcacgatggggtcgcatcgtggcacgatggtgcg 23783401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 30790882 - 30790793
Alignment:
Q  255 gcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||| |||||||||| ||| ||||||||| | || ||||| ||||||||||| |||||||||||||| |||||  ||||||||||||||||    
T  30790882 gcaatgtggcacgattggatgtttcagttat-gaagcaagtcactggaaaaaacgtggcacgatgggatcgcaatgtggcacgatggtgcg 30790793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 49687334 - 49687418
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 319  Q
    |||||||||| ||||||  ||||||||||||| | |||||||||||| |||||||||||| |||||||    ||||||||||||||    
T  49687334 aatcgtggcatgatggctgggcaacgtggcacaattggaggtttcag-ttttgaggcaagtcactggatttttcgtggcacgatgg 49687418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 344
Target Start/End: Original strand, 39462310 - 39462400
Alignment:
Q  254 ggcaacgtggcacgatg-gaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||  |||||||||||||| |||||||| || ||||    ||||||||||||||| | |||  ||||||||||||||||    
T  39462310 ggcaacgtggcacgattagaggtttcagtttt-gaggcaagtcagtggatttttcgtggcacgatgggattgcaatgtggcacgatggtgcg 39462400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 38925965 - 38925915
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttt 284  Q
    |||||||| ||||||||  ||||||||||||||| ||||||||||||||||    
T  38925965 aatcgtggtacgatggctgggcaacgtggcacgattggaggtttcagtttt 38925915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 13449996 - 13449947
Alignment:
Q  295 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||| |||||| || ||| |||||| ||||||||||||    
T  13449996 cactggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcg 13449947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 343
Target Start/End: Original strand, 41646717 - 41646801
Alignment:
Q  259 cgtggcacgatg-gaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgc 343  Q
    |||||||||||  |||||||||||||| |||||||| |||||||    |||||||||| |||| | ||| ||||||||||||||||    
T  41646717 cgtggcacgattagaggtttcagtttt-gaggcaagtcactggatttttcgtggcacggtgggattgcaacgtggcacgatggtgc 41646801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 210 - 344
Target Start/End: Complemental strand, 19502542 - 19502408
Alignment:
Q  210 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 309  Q
    ||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19502542 ttaacttaaaatcaggtttctgcagaatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttttaggcaaggcactggaaaaatcgt 19502443  T
Q  310 ggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||    
T  19502442 ggcacgatggggtcgcatcgtggcacgatggtgcg 19502408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 210 - 344
Target Start/End: Original strand, 27104523 - 27104657
Alignment:
Q  210 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 309  Q
    ||||||| ||||||||||| |||| |||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27104523 ttaacttaaaatcagatttctgcagaatcgtggcacgattgaagggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 27104622  T
Q  310 ggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||| |||||||||||||||||||||||    
T  27104623 ggcacgatgggatcgcatcgtggcacgatggtgcg 27104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 201 - 344
Target Start/End: Complemental strand, 19504885 - 19504742
Alignment:
Q  201 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 300  Q
    |||||| | ||||||| ||||||| |||  ||| |||| |||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  19504885 atgtgaaagttaacttaaaatcaggtttcagcagaatcatggcacgatggcaaggcaacgtggcacgatggaggttttaattttttaggcaaggcactgg 19504786  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19504785 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 19504742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 24162752 - 24162609
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttt-gaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||  ||| |||| ||||||||||| ||||   |||||||||||||||||||||||||||||||| |||||||||||||||    
T  24162752 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacaatggttgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 24162653  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  24162652 aaaaatcgtggcacgatggggtcgcatcgtggcacgattgtgcg 24162609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 36559358 - 36559216
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  36559358 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 36559259  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36559258 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 36559216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 340
Target Start/End: Complemental strand, 36561677 - 36561539
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  |  |||||||||||||||| |||||||  ||||||||||||||    
T  36561677 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcacggcacgatggaggttttagttttttgggcaaggcactgga 36561578  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatgg 340  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36561577 aaaatcgtggcacgatggggtcgcatcgtggcacgatgg 36561539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 45332675 - 45332533
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||| ||||||    
T  45332675 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggaactgga 45332576  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||| ||||||||||| ||||||||||||||||||||    
T  45332575 aaaatcgtggaacgatggggtcacatcgtggcacgatggtgcg 45332533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 235 - 344
Target Start/End: Complemental strand, 21521201 - 21521092
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||| || ||||| |||||||||||||||| ||||||||| ||||| ||||||    
T  21521201 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttt-gaagcaagccactggaaaaatcgtgccacgatgggatcgcaacgtggc 21521103  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  21521102 acgatggtgcg 21521092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 42064264 - 42064373
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||| ||  |||||||||| |||| |||||||||||  ||| ||||||| ||||||||||||||||||||||||||| || |||||||||    
T  42064264 aatcgtggcacgattgctgggcaacgtggtacgactggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatgggatcacatcgtggc 42064362  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  42064363 acgatggtgcg 42064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 210 - 319
Target Start/End: Complemental strand, 43624077 - 43623968
Alignment:
Q  210 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 308  Q
    ||||||| ||||||| ||| |||| |||| ||||||||||||  |||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  43624077 ttaacttaaaatcaggtttctgcagaatcatggcacgatggctgggcaacatggcacgattggaggtttcagtttt-gaggcaaggcactgaaaaaatcg 43623979  T
Q  309 tggcacgatgg 319  Q
    |||||||||||    
T  43623978 tggcacgatgg 43623968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 235 - 344
Target Start/End: Complemental strand, 6259321 - 6259212
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||||||   |||||||||||| || ||| ||||||||||| |||| ||| |||||||||||||||||||||||||| ||||| |||| |    
T  6259321 aatcgtggcacgatggctgtgcaacgtggcactattggatgtttcagtttt-gaggaaagtcactggaaaaatcgtggcacgatgggatcgcaacgtgac 6259223  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  6259222 acgatggtgcg 6259212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 13910491 - 13910441
Alignment:
Q  294 gcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13910491 gcactggaaaaatcgtggcacgatggggtcgcattgtggcacgatggtgcg 13910441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 344
Target Start/End: Complemental strand, 22407915 - 22407806
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||| | | || ||| ||||||||| ||| ||||||||||| |||||||| || || |||||| ||||||||||||| || || ||||||    
T  22407915 aatcgtggcacgattgaagggtaacatggcacgattggatgtttcagtttt-gaggcaagtcagtgaaaaaattgtggcacgatgggatcacaacgtggc 22407817  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  22407816 acgatggtgcg 22407806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 305 - 344
Target Start/End: Complemental strand, 36561532 - 36561493
Alignment:
Q  305 atcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36561532 atcgtggcacgatggggtcgcatcgtggcacgatggtgcg 36561493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 6264611 - 6264546
Alignment:
Q  254 ggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 319  Q
    |||||||||||| ||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  6264611 ggcaacgtggcatgattggatgtttcagtttt-gaggcaagtcactggaaaaatcgtggcacgatgg 6264546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 40032553 - 40032468
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggg 320  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||| ||||||| |||| |||||||    |||||||||||||||    
T  40032553 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcag-ttttgagacaagtcactggatttttcgtggcacgatggg 40032468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 36561553 - 36561518
Alignment:
Q  305 atcgtggcacgatggggtcgcatcgtggcacgatgg 340  Q
    ||||||||||||||||||||||||||||||||||||    
T  36561553 atcgtggcacgatggggtcgcatcgtggcacgatgg 36561518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 4e-57; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 204 - 344
Target Start/End: Original strand, 51015042 - 51015182
Alignment:
Q  204 tgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaa 303  Q
    ||||| ||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51015042 tgagagttaacttaaaatcagatttctgcagaatcgtggcatgatggcaaggcaacgtggcacgatggaggtttcagttttttaggcaaggcactggaaa 51015141  T
Q  304 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  51015142 aattgtggcacgatggggtcgcatcgtggcacgatggtgcg 51015182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 11006781 - 11006638
Alignment:
Q  202 tgtgagatttaacttcaaatcagattt-atgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||| ||| ||||| |||||||||||||| ||  |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  11006781 tgtgagagttaacttaaaatcaggttttatgcagaatcgtggcacgatcgctgggcaacgtggcacgatggaggtttcaattttttaggcaaggcactgg 11006682  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11006681 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 11006638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 9177035 - 9176893
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| ||  ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  9177035 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggttaggcaacgtggcacgatggaggttttagttttttaggcaaggcactgga 9176936  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  9176935 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcg 9176893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 210 - 344
Target Start/End: Complemental strand, 37089906 - 37089771
Alignment:
Q  210 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatg-gaggtttcagtttttgaggcaaggcactggaaaaatcg 308  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||| || |||| ||||||| |||  |||||||||||||||||    
T  37089906 ttaacttaaaatcagatttctgcagaatcgtggcacgatggcaaggcaacgtggcacgatgagatgttttagttttttaggtgaggcactggaaaaatcg 37089807  T
Q  309 tggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||||||||||||||||||    
T  37089806 tggcacgatggggtcgcatcgtggcacgatggtgcg 37089771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 16932360 - 16932218
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  16932360 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 16932261  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  16932260 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcg 16932218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 200 - 344
Target Start/End: Complemental strand, 16934716 - 16934572
Alignment:
Q  200 aatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactg 299  Q
    ||||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||| ||||||||||||||||| |||||||  ||||||||||||    
T  16934716 aatgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacatggcacgatggaggttttagttttttgggcaaggcactg 16934617  T
Q  300 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  16934616 gaaaaatcgtggcacgatggggtctcatcctggcacgatggtgcg 16934572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 200 - 344
Target Start/End: Complemental strand, 22783319 - 22783175
Alignment:
Q  200 aatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactg 299  Q
    ||||||||| ||||||| ||||||| ||| |||| |||||||| ||||| ||  |||||||||||||||||||||||| |||||||  ||||||||||||    
T  22783319 aatgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactg 22783220  T
Q  300 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  22783219 gaaaaatcatggcacgatggggtctcatcgtggcacgatggtgcg 22783175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 36920125 - 36919984
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||| ||  |||| |||||||||||||||||  |||||||||||||||| |||||||||| |||| |||||||| ||||||    
T  36920125 tgtgagagttaacttaaaatcaggttc-tgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaatttt-gaggcaagtcactgg 36920028  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  36920027 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 36919984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 9174684 - 9174543
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||  |||| ||||||||||||| ||| ||||||||| ||||||||||||||| ||||| | |||||||||||||||    
T  9174684 tgtgagagttaacttaaaatcaggttc-tgcagaatcgtggcacgacggctaggcaacgtagcacgatggaggttttagtttattaggcaaggcactgga 9174586  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  9174585 aaaatcatggcacgatggggtctcatcgtggcacgatggtgcg 9174543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 22780952 - 22780810
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||| ||||| ||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  22780952 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 22780853  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||    
T  22780852 aaaatcatggcacgatggggtctcattgtggcacgatggtgcg 22780810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 210 - 342
Target Start/End: Original strand, 24888598 - 24888730
Alignment:
Q  210 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 308  Q
    ||||||| ||||||||||| |||| ||| ||||||||||||| ||||||||||||||||| ||||||||||  ||| ||||||| |||||||||||||||    
T  24888598 ttaacttaaaatcagatttctgcagaattgtggcacgatggctaggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcg 24888696  T
Q  309 tggcacgatggggtcgcatcgtggcacgatggtg 342  Q
    |||||||||||| |||||||||||||||||||||    
T  24888697 tggcacgatgggatcgcatcgtggcacgatggtg 24888730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 202 - 342
Target Start/End: Complemental strand, 5638006 - 5637867
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||  |||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5638006 tgtgagagttaacttaaaatcaggtttctgcggaatcgtggcacgattgctgggcaacgtggcacgatggaggtttcag-ttttgaggcaaggcactgga 5637908  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtg 342  Q
    |||||| || ||||||||| ||||||||||||| |||||||    
T  5637907 aaaatcatgtcacgatgggatcgcatcgtggcatgatggtg 5637867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 3825112 - 3824970
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||| |||||||||  |||||| ||||||||| ||||||||||||||| ||||||| |||||||    
T  3825112 tgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatggctgggcaacatggcacgattggaggtttcagtttt-gaggcaaagcactgg 3825014  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||| |||||| |||||||||||||||||||||||||||||    
T  3825013 aaaaatcatggcacaatggggtcgcatcgtggcacgatggtgcg 3824970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 38408993 - 38409135
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| |||| |||||| |||| |||||||||||||| ||  |||| ||||||||||| ||||||||||  ||| ||||||| |||||||    
T  38408993 tgtgagagttaacttaaaattagatttctgcagaatcgtggcacgattgctgggcatcgtggcacgattggaggtttcaagttt-gaggcaaagcactgg 38409091  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38409092 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 38409135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 7941133 - 7941251
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7941133 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggtttcagttttttgaggcaaggcactgg 7941232  T
Q  301 aaaaatcgtggcacgatgg 319  Q
    |||||| ||||||||||||    
T  7941233 aaaaatggtggcacgatgg 7941251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 235 - 342
Target Start/End: Complemental strand, 22044897 - 22044788
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttt--gaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtgg 332  Q
    |||||||||||||| | | |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  22044897 aatcgtggcacgattgaagggcaacgtggcacgatggaggtttcattttttttgaggcaaggcactggaaaaatcgtggcacgatgggatcgcatcgtgg 22044798  T
Q  333 cacgatggtg 342  Q
    ||||||||||    
T  22044797 cacgatggtg 22044788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 204 - 344
Target Start/End: Complemental strand, 22803270 - 22803130
Alignment:
Q  204 tgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaa 302  Q
    ||||| ||||||| |||||| |||| |  | |||||||| ||||||||  |||||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  22803270 tgagagttaacttaaaatcaaatttctatagaatcgtggtacgatggctgggcaacgtggcacgattggaggtttcagtttt-gaggaaaggcactggaa 22803172  T
Q  303 aaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  22803171 aaatcgtggctcgatggggtcgcatcgtggcacgatggtgcg 22803130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 343
Target Start/End: Complemental strand, 36922036 - 36921893
Alignment:
Q  199 taatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcac 297  Q
    |||||||||| ||||||| ||||||| ||  |||| |||||||| ||||||||  |||||| ||||||||| ||||||||||||||| |||||||| |||    
T  36922036 taatgtgagagttaacttaaaatcaggttc-tgcaaaatcgtggtacgatggctgggcaacatggcacgattggaggtttcagtttt-gaggcaagtcac 36921939  T
Q  298 tggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgc 343  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  36921938 tggaaaaatcgtggcacgatggggtcgcattgtggcacgatggtgc 36921893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 11434769 - 11434887
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcag-tttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  11434769 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatggctgggcaacgtggcacgatggaggtttcagttttttgaggcaagacactgg 11434868  T
Q  301 aaaaatcgtggcacgatgg 319  Q
    |||||||||||||||||||    
T  11434869 aaaaatcgtggcacgatgg 11434887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 18846923 - 18847067
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttat--gcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcact 298  Q
    ||||||| ||||||| ||||||||||| |  ||| |||||||||||||| |   || | ||||||||||| ||||||||||||||| ||||||||| |||    
T  18846923 tgtgagagttaacttaaaatcagatttttctgcagaatcgtggcacgattgttgggaatcgtggcacgattggaggtttcagtttt-gaggcaaggtact 18847021  T
Q  299 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  18847022 ggaaaaatcgtggtacgatggggtcgcatcgtggcacgatggtgcg 18847067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 31850101 - 31849996
Alignment:
Q  239 gtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacga 337  Q
    |||||||||| ||  |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31850101 gtggcacgattgctgggcaacgtggcacgattggaggtttcagttttgg-ggcaaggcactggaaaaatcttggcacgatggggtcgcatcgtggcacga 31850003  T
Q  338 tggtgcg 344  Q
    |||||||    
T  31850002 tggtgcg 31849996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 259 - 343
Target Start/End: Complemental strand, 11009075 - 11008990
Alignment:
Q  259 cgtggcacgatggaggtttcagtttttg-aggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgc 343  Q
    |||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11009075 cgtggcacaatggaggtttcaatttttttaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgc 11008990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 235 - 340
Target Start/End: Original strand, 9148087 - 9148192
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||| ||||| ||  ||||||||||| |||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  9148087 aatcgtggtacgattgctgggcaacgtggcgcgattggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatggggttgcatcgtggc 9148185  T
Q  334 acgatgg 340  Q
    |||||||    
T  9148186 acgatgg 9148192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 22801346 - 22801262
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 319  Q
    ||||||||||||||||   ||||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  22801346 aatcgtggcacgatggttgggcaacgtgacacgattggaggtttcagtttt-gaggcaaggaactggaaaaatcgtggcacgatgg 22801262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 344
Target Start/End: Original strand, 5198266 - 5198356
Alignment:
Q  254 ggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||| |||| |||||  ||| ||||||| || |||||||||||||||||||||||| || ||||||||||||||||||||    
T  5198266 ggcaacgtggcacgattggagatttcaagttt-gaggcaaagctctggaaaaatcgtggcacgatgggatcacatcgtggcacgatggtgcg 5198356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 48486146 - 48486255
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||||||   |||||||||||||| |||||||||||| |||||||||||| |||||||    |||||||||||||||||| ||  |||||    
T  48486146 aatcgtggcacgatggctgagcaacgtggcacgattggaggtttcag-ttttgaggcaagtcactggatttttcgtggcacgatggggtcacaatgtggc 48486244  T
Q  334 acgatggtgcg 344  Q
    || ||||||||    
T  48486245 acaatggtgcg 48486255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 340
Target Start/End: Complemental strand, 52942974 - 52942869
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    ||||||||||||||||   |||||||||||||||| ||||||||||| ||| |||||||| ||||| | |  |||||||||||||||||| || ||||||    
T  52942974 aatcgtggcacgatggttgggcaacgtggcacgattggaggtttcagcttt-gaggcaagtcactgaatatttcgtggcacgatggggtcacaacgtggc 52942876  T
Q  334 acgatgg 340  Q
    |||||||    
T  52942875 acgatgg 52942869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 22047135 - 22047083
Alignment:
Q  289 gcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtg 342  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  22047135 gcaaggcactggaaaaatc-tggcacgatgggatcgcatcgtggcacgatggtg 22047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 343
Target Start/End: Complemental strand, 40091923 - 40091813
Alignment:
Q  233 ataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtg 331  Q
    |||||||||||||| |||   || ||||||||||||| |||| |||||||||| || | ||| || ||||||||||||| || |||||||||||| ||||    
T  40091923 ataatcgtggcacggtggttgggtaacgtggcacgattggagatttcagtttt-gaagtaagccattggaaaaatcgtgccatgatggggtcgcaacgtg 40091825  T
Q  332 gcacgatggtgc 343  Q
     |||||||||||    
T  40091824 acacgatggtgc 40091813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 22048542 - 22048492
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttt 285  Q
    |||||||||||||| | | ||||||||||||||||||||||||||||||||    
T  22048542 aatcgtggcacgattgaagggcaacgtggcacgatggaggtttcagttttt 22048492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 24880299 - 24880387
Alignment:
Q  256 caacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||||    ||| ||||||||||| | ||| |||||||||||||||||    
T  24880299 caacgtggcacgaatggaggtttcagtttt-gaggcaagtcactggatttttcgcggcacgatgggattgcaacgtggcacgatggtgcg 24880387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 341
Target Start/End: Original strand, 24878836 - 24878922
Alignment:
Q  255 gcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggt 341  Q
    ||||||||||||||| ||||||||||||||| || ||||| |||||||    ||||||||||||||| | ||| ||||||||||||||    
T  24878836 gcaacgtggcacgattggaggtttcagtttt-gacgcaagtcactggatttttcgtggcacgatgggattgcaacgtggcacgatggt 24878922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 619932 - 619844
Alignment:
Q  256 caacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||| || ||| ||||||||||| |||||||| || ||||    ||||||||||||||||||||| |||||||| ||||||||    
T  619932 caacgtggcacaattggatgtttcagtttt-gaggcaagtcattggatttttcgtggcacgatggggtcgcaacgtggcacaatggtgcg 619844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 16689380 - 16689331
Alignment:
Q  295 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||| |||||||   ||||| |||||||||||||||||    
T  16689380 cactggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcg 16689331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 8529012 - 8529060
Alignment:
Q  296 actggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||| |||||||  | ||||||||| ||||||||||||    
T  8529012 actggaaaaatcgtgccacgatgaagccgcatcgtgccacgatggtgcg 8529060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 202 - 342
Target Start/End: Complemental strand, 6064006 - 6063866
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||  |||||||||||| |    
T  6064006 tgtgagaattaacttaaaatcaggtttatgcagaatcgtggcacgatggcaaggcaacgtggcacaatggaggttttagttttttgggcaaggcactgaa 6063907  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtg 342  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6063906 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtg 6063866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 22114842 - 22114700
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| || | ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22114842 tgtgagagttaacttaaaatcaggtttctgtagaatcgtggcacgatggttgggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 22114743  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  22114742 aaaattgtggcacgatggggtcgcatcgtggcacgatggtgcg 22114700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 18099707 - 18099565
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  18099707 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttt-gaggcaagacactgg 18099609  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18099608 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 18099565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 201 - 344
Target Start/End: Original strand, 50493675 - 50493818
Alignment:
Q  201 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 300  Q
    |||||||| ||||||| ||||||| ||| |||| |||||||||||||| ||  |||||||||||||||||||||||| |||||||  |||||||||||||    
T  50493675 atgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgg 50493774  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||    
T  50493775 aaaaatcgtggcacgatggagtctcatcgtggcacgatggtgcg 50493818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 38210067 - 38210209
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  38210067 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 38210166  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  38210167 aaaatcgtggcacgatggggtctcatcgtggcacgatagtgcg 38210209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 218 - 331
Target Start/End: Complemental strand, 10192513 - 10192401
Alignment:
Q  218 aaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgat 317  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10192513 aaatcagatttatgcggaatcgtggcacgatcgcaaggcaacgtggcacgatggaggtttcag-ttttgaggcaaggcactggaaaaatcgtggcacgat 10192415  T
Q  318 ggggtcgcatcgtg 331  Q
    ||| ||||||||||    
T  10192414 gggatcgcatcgtg 10192401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 202 - 343
Target Start/End: Complemental strand, 53896754 - 53896613
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||| ||  |||||||||||||||||||||||| |||||||  ||||||| ||||||    
T  53896754 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgattgctgggcaacgtggcacgatggaggttttagttttttgggcaaggtactgga 53896655  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgc 343  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  53896654 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgc 53896613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 219 - 344
Target Start/End: Original strand, 5899476 - 5899601
Alignment:
Q  219 aatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatg 318  Q
    |||||| ||| ||||||||| ||||||||| | | ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||    
T  5899476 aatcaggtttctgcataatcatggcacgattgaagggcaacgtggcacgatggatgttttagttttttaggcaaggcactggaaaaatcatggcacgatg 5899575  T
Q  319 gggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||||||||    
T  5899576 gggtcgcatcgtggcacgatggtgcg 5899601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 203 - 344
Target Start/End: Original strand, 5191374 - 5191515
Alignment:
Q  203 gtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgga 301  Q
    |||||| ||||||| ||||||||||| |||| |||||||||||||| ||  |||| ||||||||||| ||||||||||||||| ||||||||| ||||||    
T  5191374 gtgagagttaacttaaaatcagatttctgcagaatcgtggcacgattgctgggcatcgtggcacgattggaggtttcagtttt-gaggcaaggtactgga 5191472  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  5191473 aaaatcgtggcacgatgggatctcatcgtggcacgatggtgcg 5191515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 218 - 331
Target Start/End: Complemental strand, 10085593 - 10085481
Alignment:
Q  218 aaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgat 317  Q
    |||||||||||||||  |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10085593 aaatcagatttatgcggaatcgtggcatgatcgcaaggcaacgtggcacgatggaggtttcag-ttttgaggcaaggcactggaaaaatcgtggcacgat 10085495  T
Q  318 ggggtcgcatcgtg 331  Q
    ||| || |||||||    
T  10085494 gggatcacatcgtg 10085481  T

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Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 333
Target Start/End: Complemental strand, 18097422 - 18097291
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||||| ||||||||||||||| |||||||||||  ||    
T  18097422 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttt-gaggcaaggcatagg 18097324  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    ||||||||||||||||||||||||||| |||||    
T  18097323 aaaaatcgtggcacgatggggtcgcatagtggc 18097291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 319
Target Start/End: Original strand, 38889756 - 38889875
Alignment:
Q  201 atgtgagatttaacttcaaatcagattta-tgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactg 299  Q
    |||||||| ||||||| |||| || |||  |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  38889756 atgtgagagttaacttaaaattaggttttctgcagaatcgtggtacgatggcaaggcaacgtggcacgatggaggtttcagttttttaggcaaggcattg 38889855  T
Q  300 gaaaaatcgtggcacgatgg 319  Q
    ||||||||||||||||||||    
T  38889856 gaaaaatcgtggcacgatgg 38889875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 5885983 - 5886126
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaa-cgtggcacgatggaggtttcagtttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| |||| || ||| | || |||||||||||||| | |  |||| |||||||||||||| |||| ||||||| |||||||| |||||    
T  5885983 tgtgagagttaacttaaaattaggtttttacagaatcgtggcacgattgaagcgcaaacgtggcacgatggatgttttagttttttaggcaaggtactgg 5886082  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  5886083 aaaaatcgtggcacgatggggtcgcatcgtggtacgatggtgcg 5886126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 259 - 344
Target Start/End: Original strand, 25388654 - 25388739
Alignment:
Q  259 cgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25388654 cgtggcacgatggaggttttagttttttgggcaaggcactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcg 25388739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 35777163 - 35777280
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| |||| |||||| |||| |||||||||||||  ||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  35777163 tgtgagagttaacttaaaattagatttctgcagaatcgtggcacgacagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 35777262  T
Q  302 aaaatcgtggcacgatgg 319  Q
    ||||||||||||||||||    
T  35777263 aaaatcgtggcacgatgg 35777280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 11162924 - 11163008
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 319  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11162924 aatcgtggcacgattgctgggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaattgtggcacgatgg 11163008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 344
Target Start/End: Complemental strand, 10956505 - 10956422
Alignment:
Q  261 tggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10956505 tggcacgattggaggtttcagttttgg-ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 10956422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 235 - 342
Target Start/End: Original strand, 1321194 - 1321301
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgatg-gaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||| ||  ||||||||||||||||  |||||||||  ||| ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  1321194 aatcgtggcacgattgctgggcaacgtggcacgattagaggtttcaagttt-gaggcaaagcactgaaaaaatcgtggcacgatggggtcgcatcgtggc 1321292  T
Q  334 acgatggtg 342  Q
    |||||||||    
T  1321293 acgatggtg 1321301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 235 - 342
Target Start/End: Original strand, 26720301 - 26720408
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||||||   ||||||||||| ||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  26720301 aatcgtggcacgatggctgagcaacgtggcaggattggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatgggatcgcatcgtggc 26720399  T
Q  334 acgatggtg 342  Q
    |||||||||    
T  26720400 acgatggtg 26720408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 235 - 344
Target Start/End: Complemental strand, 5523119 - 5523010
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||| ||| ||  |||||| ||||||||| || |||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  5523119 aatcgtggcaagattgctgggcaacatggcacgattggtggtttcagtttt-gaggcaaggtactggaaaaatcgtggcacaatgggatcgcatcgtggc 5523021  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  5523020 acgatggtgcg 5523010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 11170178 - 11170260
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgat 317  Q
    |||||||||||| | ||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  11170178 aatcgtggcacggttgctgggcaacgtggcacgatggaggtttcggtttttgaggcaaggcactggaaaaatcgtggctcgat 11170260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 344
Target Start/End: Complemental strand, 32264581 - 32264438
Alignment:
Q  201 atgtgagatttaacttcaaatcagatttatgcataa-tcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcact 298  Q
    |||||||| ||||||| ||||||| ||| |||| || |||||||||||||||  || ||||||||||||| |||||||||||||||||||||||| ||||    
T  32264581 atgtgagagttaacttaaaatcaggttt-tgcagaaatcgtggcacgatggctggg-aacgtggcacgattggaggtttcagtttttgaggcaagtcact 32264484  T
Q  299 ggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||    ||||||||||||||| | ||| |||||||||||||||||    
T  32264483 ggatttttcgtggcacgatgggcttgcaacgtggcacgatggtgcg 32264438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 6719651 - 6719532
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat---ggaggtttcagtttttgaggcaaggcact 298  Q
    ||||||| ||||||| ||||||| ||| ||| ||||||||||||||| | | |||| |||||||||||    ||||||||||||||| |||||| |||||    
T  6719651 tgtgagaattaacttaaaatcaggtttctgcttaatcgtggcacgattgaagggcatcgtggcacgattggagaggtttcagttttt-aggcaatgcact 6719553  T
Q  299 ggaaaaatcgtggcacgatgg 319  Q
    |||||||||||||||||||||    
T  6719552 ggaaaaatcgtggcacgatgg 6719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 7606963 - 7606880
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttt 285  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||| |||||||||  ||||||||||||||||||||||||||||||||    
T  7606963 tgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatggctgggcaacgtggcacgatggaggtttcagttttt 7606880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 10958767 - 10958718
Alignment:
Q  295 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10958767 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 10958718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 6066254 - 6066195
Alignment:
Q  260 gtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 319  Q
    |||||||||||||||||| |||||||  |||||||||||||||| |||||||||||||||    
T  6066254 gtggcacgatggaggttttagttttttgggcaaggcactggaaacatcgtggcacgatgg 6066195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 24177032 - 24177141
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||| | ||| |||||||||||||||| ||  ||||||||| | || ||||| |||||||||||  ||||||||||||| |||||  |||||    
T  24177032 aatcgtggcacgtttgcagggcaacgtggcacgattggttgtttcagttct-gaagcaagtcactggaaaaaatgtggcacgatgggatcgcaatgtggc 24177130  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  24177131 acgatggtgcg 24177141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 304 - 344
Target Start/End: Original strand, 3859350 - 3859390
Alignment:
Q  304 aatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  3859350 aatcgtggcacgatggggtcacatcgtggcacgatggtgcg 3859390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 3859315 - 3859365
Alignment:
Q  200 aatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatgg 250  Q
    ||||||||| ||||||| ||||||| ||| |||||||||||||||||||||    
T  3859315 aatgtgagagttaacttaaaatcaggtttctgcataatcgtggcacgatgg 3859365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 45882752 - 45882801
Alignment:
Q  295 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||| ||||||||| | ||| |||||||||||||||||    
T  45882752 cactggaaaaatcgtgccacgatgggattgcaacgtggcacgatggtgcg 45882801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 4308725 - 4308676
Alignment:
Q  295 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||| |||||| || ||| |||||| ||||||||||||    
T  4308725 cactggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcg 4308676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 13054 - 12912
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  13054 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgtcaaggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 12955  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  12954 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcg 12912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 3e-51; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 34477632 - 34477490
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||  ||| |||| |||||||||||||||||  |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  34477632 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggttttagttttttaggcaaggcactgga 34477533  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34477532 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 34477490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 2174680 - 2174797
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2174680 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagttttttaggcaaggcactgga 2174779  T
Q  302 aaaatcgtggcacgatgg 319  Q
    ||||||||||||||||||    
T  2174780 aaaatcgtggcacgatgg 2174797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 38881878 - 38881987
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 334  Q
    |||||||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38881878 aatcgtggcacgattgctgggcaacgtggcacgatggaggttttagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 38881977  T
Q  335 cgatggtgcg 344  Q
    ||||||||||    
T  38881978 cgatggtgcg 38881987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 10749505 - 10749647
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  10749505 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 10749604  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10749605 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 10749647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 31544798 - 31544940
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||| ||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  31544798 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 31544897  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||| ||||| | ||||||||||||    
T  31544898 aaaatcgtggcacgatggggtctcatcgagacacgatggtgcg 31544940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 210 - 344
Target Start/End: Original strand, 4236378 - 4236512
Alignment:
Q  210 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 308  Q
    ||||||| ||||||||||| |||| ||| |||||||||||||  |||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  4236378 ttaacttaaaatcagatttctgcagaattgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttta-aggcaaggcactggaaaaatcg 4236476  T
Q  309 tggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||| ||||| |||||||||||||||||||||||    
T  4236477 tggcacaatgggatcgcatcgtggcacgatggtgcg 4236512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 10756960 - 10757102
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||| |||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  10756960 tgtgagagttaacttaaaatcaggtttctgcacaatcgtagcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 10757059  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10757060 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 10757102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 15355065 - 15354923
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  15355065 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 15354966  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15354965 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 15354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 15357341 - 15357199
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  15357341 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 15357242  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15357241 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 15357199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 31542442 - 31542584
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||| |||||| ||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  31542442 tgtgagagttaacttaaaatcaggtttctgcaaaatcgtgacacgatagctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 31542541  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||| ||||| | ||||||||||||    
T  31542542 aaaatcgtggcacgatggggtctcatcgagacacgatggtgcg 31542584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 34479972 - 34479855
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  34479972 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggttttagttttttaggcaaggcactgga 34479873  T
Q  302 aaaatcgtggcacgatgg 319  Q
    ||||||||||||||||||    
T  34479872 aaaatcgtggcacgatgg 34479855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 39797849 - 39797966
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| |||    
T  39797849 tgtgagagttaacttaaaatcaggtttctgcataatcgtggcacgatggctgggcaacgtggcatgatggaggtttcagtttttgaggcaaggcaccgga 39797948  T
Q  302 aaaatcgtggcacgatgg 319  Q
    |||||| |||||||||||    
T  39797949 aaaatcatggcacgatgg 39797966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 319
Target Start/End: Complemental strand, 25921993 - 25921874
Alignment:
Q  201 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagt-ttttgaggcaaggcactg 299  Q
    |||||||| ||||||| ||||||| ||| |||| ||||||||||||||||   | |||||||||||||||||||||||||| ||||||||||||||||||    
T  25921993 atgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggttggacaacgtggcacgatggaggtttcagttttttgaggcaaggcactg 25921894  T
Q  300 gaaaaatcgtggcacgatgg 319  Q
    ||||||||||||||||||||    
T  25921893 gaaaaatcgtggcacgatgg 25921874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 16775930 - 16776039
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||  ||| ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  16775930 aatcgtggcacgatggcaaggcaacgtgacacgattggaggtttcaagttt-gaggcaaagcactgaaaaaatcgtggcacgatggggtcgcatcgtggc 16776028  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  16776029 acgatggtgcg 16776039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 201 - 344
Target Start/End: Original strand, 23664833 - 23664976
Alignment:
Q  201 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 300  Q
    |||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||| ||| | |||||  || ||||||||||    
T  23664833 atgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggagtttttatttttttgggaaaggcactgg 23664932  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  23664933 aaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcg 23664976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 201 - 344
Target Start/End: Complemental strand, 23793754 - 23793611
Alignment:
Q  201 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgg 300  Q
    |||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||| ||| | |||||  || ||||||||||    
T  23793754 atgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggagtttttatttttttgggaaaggcactgg 23793655  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  23793654 aaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcg 23793611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 23667109 - 23667251
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||| ||| | |||||  || |||||||||||    
T  23667109 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggagtttttatttttttgggaaaggcactgga 23667208  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  23667209 aaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcg 23667251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 259 - 344
Target Start/End: Complemental strand, 31179897 - 31179812
Alignment:
Q  259 cgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31179897 cgtggcacgatggaggttttagttttttgggcaagacactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcg 31179812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 659746 - 659829
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 319  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  659746 aatcgtggcacgatggctaggcaacgtggcacgattggaggtttcagttt--gaggcaagtcactggaaaaatcgtggcacgatgg 659829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 38960604 - 38960487
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||   | |||||||||||||||| |||||||  ||||||||||||||    
T  38960604 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggctttgcggcacgatggaggttttagttttttgggcaaggcactgga 38960505  T
Q  302 aaaatcgtggcacgatgg 319  Q
    ||||||||||||||||||    
T  38960504 aaaatcgtggcacgatgg 38960487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 21684909 - 21684858
Alignment:
Q  293 ggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21684909 ggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 21684858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 659929 - 659850
Alignment:
Q  257 aacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacga 337  Q
    ||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  659929 aacgtggcacgattggaggtttcagttt--gaggcaagtcactggaaaaatcgtggcacgatgaggtcgcattgtggcacga 659850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 300
Target Start/End: Complemental strand, 18186589 - 18186489
Alignment:
Q  200 aatgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcact 298  Q
    ||||||||| ||||||| ||||||  ||| |||| |||||||| ||||||||  ||||||||||||||| |||||||||||| |||||||||||| ||||    
T  18186589 aatgtgagagttaacttaaaatcaagtttctgcagaatcgtggtacgatggctgggcaacgtggcacgattggaggtttcag-ttttgaggcaagtcact 18186491  T
Q  299 gg 300  Q
    ||    
T  18186490 gg 18186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 342
Target Start/End: Original strand, 21947803 - 21947910
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||| ||| |||||||     |||||||||||||| | ||| ||||||    
T  21947803 aatcgtggcacgatggctaggcaacgtgacacgattggaggtttcag-ttttgaggtaagtcactggactttacgtggcacgatgggattgcaacgtggc 21947901  T
Q  334 acgatggtg 342  Q
    |||||||||    
T  21947902 acgatggtg 21947910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 31466496 - 31466379
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcat-aatcgtggcacgatggcaaggcaacgtggcacgatg-gaggtttcagtttttgaggcaaggcactg 299  Q
    ||||||| ||||||| ||||||| ||| ||||  |||||||||||||| | | ||||||||||||||||| || ||||||||| | |||||||| |||||    
T  31466496 tgtgagagttaacttaaaatcaggttt-tgcaggaatcgtggcacgattgaagggcaacgtggcacgatgagatgtttcagttat-gaggcaagtcactg 31466399  T
Q  300 gaaaaatcgtggcacgatgg 319  Q
    |||||||| |||||||||||    
T  31466398 gaaaaatcttggcacgatgg 31466379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 2818813 - 2818729
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 319  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||| |||||||||||| |||||||    ||||||||||||||    
T  2818813 aatcgtggcacgatggctaggcaacatggcacgattggaggtttcag-ttttgaggcaagtcactggatttttcgtggcacgatgg 2818729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 338
Target Start/End: Complemental strand, 20504419 - 20504316
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||| ||  ||||||||||||||| ||||||||| || |||||||||||| || ||||    ||||||||||||||| | ||| ||||||    
T  20504419 aatcgtggcacgatagctgggcaacgtggcacgattggaggttttag-ttttgaggcaagtcaatggatttttcgtggcacgatgggattgcaacgtggc 20504321  T
Q  334 acgat 338  Q
    |||||    
T  20504320 acgat 20504316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 21684969 - 21684905
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcac 266  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||    
T  21684969 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcac 21684905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 36402845 - 36402747
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| |||| || ||| |||| ||||  |||||||||||  |||||| | |||||| |||||||||||| |||||||||||| ||||||    
T  36402845 tgtgagagttaacttaaaattaggtttctgcagaatctaggcacgatggctgggcaacatagcacgattggaggtttcag-ttttgaggcaagtcactgg 36402747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 39854317 - 39854366
Alignment:
Q  295 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||| |||| | |  |||||||||||||||||||||||    
T  39854317 cactggaaaaatcgtgtcacggttgaatcgcatcgtggcacgatggtgcg 39854366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 42238047 - 42238096
Alignment:
Q  295 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||| |||||||   ||||| |||||||||||||||||    
T  42238047 cactggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcg 42238096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 1240171 - 1240219
Alignment:
Q  295 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgc 343  Q
    |||||||||||||||| |||||| || ||| |||||| |||||||||||    
T  1240171 cactggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgc 1240219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 12556408 - 12556325
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatg 318  Q
    ||||||||||  |||||  ||||||||||||| || ||||||||||||||| |||||||| |||||||    |||||||||||||    
T  12556408 aatcgtggcataatggctgggcaacgtggcacaattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcacgatg 12556325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 31179933 - 31179885
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatgg 250  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||||    
T  31179933 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 31179885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 8e-49; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 18812668 - 18812810
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| || | ||||||||||||| |||  |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  18812668 tgtgagagttaacttaaaatcaggtttctgaagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttaggcaaggcactgga 18812767  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18812768 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 18812810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 43079347 - 43079489
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  43079347 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggcaaggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 43079446  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||| ||||||||||| ||||||||||||||||||||    
T  43079447 aaaatcgtggtacgatggggtctcatcgtggcacgatggtgcg 43079489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 202 - 341
Target Start/End: Original strand, 43081722 - 43081861
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||||||||| |||||||||||||||||| |||||||  ||||||||||||||    
T  43081722 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggcaaggcaaagtggcacgatggaggttttagttttttgggcaaggcactgga 43081821  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggt 341  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  43081822 aaaatcgtggcacgatggggtctcatcgtggcacgatggt 43081861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 18810483 - 18810625
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| | ||||| |||||||||||||||    
T  18810483 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttatttttttaggcaaggcactgga 18810582  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||| | |||||||||||||| ||||||||||||||||||||    
T  18810583 aaaattgcggcacgatggggtcacatcgtggcacgatggtgcg 18810625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 27826815 - 27826924
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 334  Q
    |||||||||||||| ||  |||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||    
T  27826815 aatcgtggcacgattgctgggcaacgtggcacgatggaggtttcattttttgaagcaaagcactggaaaaatcgtggcacgatgggatcgcatcgtggca 27826914  T
Q  335 cgatggtgcg 344  Q
    ||||||||||    
T  27826915 cgatggtgcg 27826924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 27829126 - 27829235
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 334  Q
    |||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  27829126 aatcgtggcacgattgctgggcaacgtggcacgatggaggtttcattttttgaggcaaaacactggaaaaatcgtggcacgatgggatcgcatcgtggca 27829225  T
Q  335 cgatggtgcg 344  Q
    ||||||||||    
T  27829226 cgatggtgcg 27829235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 235 - 342
Target Start/End: Complemental strand, 12517532 - 12517425
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||||||| ||||||||||||    
T  12517532 aatcgtggcacgatggcaaggcaacgtggcacgattggaggtttcagtttt-gaggcaatgtactggaaaaatcgtggcacgatgggatcgcatcgtggc 12517434  T
Q  334 acgatggtg 342  Q
    |||||||||    
T  12517433 acgatggtg 12517425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 44720617 - 44720760
Alignment:
Q  202 tgtgagatttaacttcaaatcagattta-tgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactg 299  Q
    ||||||| ||||||| ||||||| |||  |||| |||||||||| ||| ||  ||||  |||||||| | ||||||||||||||| ||||||||| ||||    
T  44720617 tgtgagagttaacttaaaatcaggttttctgcagaatcgtggcatgattgctgggcattgtggcacgtttggaggtttcagtttt-gaggcaaggtactg 44720715  T
Q  300 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  44720716 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 44720760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 210 - 344
Target Start/End: Original strand, 14807556 - 14807690
Alignment:
Q  210 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcg 308  Q
    ||||||| ||||||| ||| |||| |||||||||| |||||   ||||||||| |||||| ||||||||||  ||| ||||||| |||||||||||||||    
T  14807556 ttaacttaaaatcaggtttctgcagaatcgtggcatgatggttgggcaacgtgacacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcg 14807654  T
Q  309 tggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||| |||||||    
T  14807655 tggcacgatggggtcgcatcgtggcacggtggtgcg 14807690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 235 - 340
Target Start/End: Complemental strand, 28252093 - 28251988
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  28252093 aatcgtggcacgatggctaggcaacgtggtacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatgggatcgcatcgtggc 28251995  T
Q  334 acgatgg 340  Q
    |||||||    
T  28251994 acgatgg 28251988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 210 - 344
Target Start/End: Original strand, 15067785 - 15067919
Alignment:
Q  210 ttaacttcaaatcagatttatgcat-aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatc 307  Q
    ||||||| ||||||||||| ||||  |||||||||| ||||||  |||||| ||||||||| ||||||||||||||| || ||||| |||||||||||||    
T  15067785 ttaacttaaaatcagattt-tgcaggaatcgtggcaagatggctgggcaacatggcacgattggaggtttcagtttt-gaagcaagccactggaaaaatc 15067882  T
Q  308 gtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
     || ||||||||| ||||| |||||||||||||||||    
T  15067883 atgccacgatgggatcgcaacgtggcacgatggtgcg 15067919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 15072506 - 15072648
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcat-aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactg 299  Q
    ||||||| ||||||| ||||||||||  ||||  ||||||| |||||||||  ||||||||| |||||| ||||||||||||||| || ||||| ||||     
T  15072506 tgtgagagttaacttaaaatcagattc-tgcaggaatcgtgacacgatggctgggcaacgtgacacgattggaggtttcagtttt-gaagcaagccacta 15072603  T
Q  300 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||| ||||||||| ||||| ||||||| |||||||||    
T  15072604 gaaaaatcgtgtcacgatgggatcgcaacgtggcatgatggtgcg 15072648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 230 - 319
Target Start/End: Complemental strand, 3886412 - 3886322
Alignment:
Q  230 tgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagt-ttttgaggcaaggcactggaaaaatcgtggcacgatgg 319  Q
    |||| ||||||| || ||||||  | |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  3886412 tgcagaatcgtgacatgatggctggacaacgtggcacgatggaggtttcagttttttgaggcaagacactggaaaaatcgtggtacgatgg 3886322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 4423868 - 4423952
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 319  Q
    ||||||||||| || ||  ||||||||||||| || |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  4423868 aatcgtggcacaattgctgggcaacgtggcacaattggaggtttcagtttta-aggcaaggcactggaaaaatcgtggcacgatgg 4423952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 344
Target Start/End: Complemental strand, 28252002 - 28251963
Alignment:
Q  305 atcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  28252002 atcgtggcacgatgggatcgcatcgtggtacgatggtgcg 28251963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 8e-49; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 26068882 - 26068740
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||||  ||||||||||||||    
T  26068882 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggcaaggcaacgtggcatgatggaggttttagttttttgggcaaggcactgga 26068783  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  26068782 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcg 26068740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 14507716 - 14507572
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagt--ttttgaggcaaggcactg 299  Q
    ||||||| ||||||| ||||||||||| |||| |||||||||||||||||  ||||||||||||||||||||||||||||  ||||||  ||||||||||    
T  14507716 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatggctgggcaacgtggcacgatggaggtttcagtttttttgatacaaggcactg 14507617  T
Q  300 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  14507616 gaaaaatggtggcacgatggggtcgcatcgtggcacgatggtgcg 14507572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 26066611 - 26066469
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| || | ||||||||||||| ||||||||||||||||||||||||||||| |||| ||  ||||||||||||||    
T  26066611 tgtgagagttaacttaaaatcaggtttctgtagaatcgtggcacgacggcaaggcaacgtggcacgatggaggttttagttatttgggcaaggcactgga 26066512  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  26066511 aaaatcgtggcacgatggggtctcatcgtggcacaatggtgcg 26066469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 33308685 - 33308827
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  ||||||||||||||||||| |||||||  ||||||||||||||    
T  33308685 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcttcgtggcacgatggaggttttagttttttgggcaaggcactgga 33308784  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33308785 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 33308827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 33310954 - 33311096
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  ||||||||||||||||||| |||||||  ||||||||||||||    
T  33310954 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcttcgtggcacgatggaggttttagttttttgggcaaggcactgga 33311053  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33311054 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 33311096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 235 - 344
Target Start/End: Complemental strand, 19227915 - 19227806
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 334  Q
    ||||||||||||||||   |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19227915 aatcgtggcacgatggttgggcaacgtggcatgatggaggtttcaatttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggca 19227816  T
Q  335 cgatggtgcg 344  Q
    ||||||||||    
T  19227815 cgatggtgcg 19227806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 29755279 - 29755137
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  29755279 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 29755180  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29755179 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 29755137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 8995288 - 8995397
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  8995288 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttttg-ggcaaggcactggaaaaatcgtggcacgatggggtcacatcgtggc 8995386  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  8995387 acgatggtgcg 8995397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 9019735 - 9019844
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  9019735 aatcgtggcacgatggctgggcaacgtggcacgattggaggtttcagtttttg-ggcaaggcactggaaaaatcgtggcacgatggggtcacatcgtggc 9019833  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  9019834 acgatggtgcg 9019844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 210 - 344
Target Start/End: Complemental strand, 11983558 - 11983426
Alignment:
Q  210 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactggaaaaatcgt 309  Q
    ||||||| ||||||| ||| |||| |||||||| |||||||   |||||| ||| |||||||||||||||||| | |||| ||| |||||||||||||||    
T  11983558 ttaacttaaaatcaggtttctgcagaatcgtggtacgatggttgggcaacatggtacgatggaggtttcagttgt-gaggtaag-cactggaaaaatcgt 11983461  T
Q  310 ggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||    
T  11983460 ggcacgatggggtcgcatcgtggcacgatggtgcg 11983426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 4816749 - 4816666
Alignment:
Q  259 cgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtg 342  Q
    ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4816749 cgtggcacgattggaggtttcagtttt-gaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtg 4816666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 235 - 342
Target Start/End: Complemental strand, 15530628 - 15530521
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||||||  || |||||||||| || ||||||||||  ||| ||||||| ||||| ||||| |||||| ||||||||| |||||||||||    
T  15530628 aatcgtggcacgatggctgggtaacgtggcacaattggaggtttcaagttt-gaggcaaagcactcgaaaattcgtggtacgatggggccgcatcgtggc 15530530  T
Q  334 acgatggtg 342  Q
    |||||||||    
T  15530529 acgatggtg 15530521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 26084818 - 26084867
Alignment:
Q  295 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||| |||||| |  |||||||||||||||||||||||    
T  26084818 cactggaaaaatcgtgccacgattgaatcgcatcgtggcacgatggtgcg 26084867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 30729284 - 30729225
Alignment:
Q  285 tgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||| |||||||||  ||||| |||||||||||| || ||||||||||| |||||    
T  30729284 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaacgtggcacgatagtgcg 30729225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 32279845 - 32279910
Alignment:
Q  254 ggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatgg 319  Q
    |||||||||||||||| ||| ||||||||| | |||||||| | |||||||| ||||||||||||||    
T  32279845 ggcaacgtggcacgattggatgtttcagttct-gaggcaagtcgctggaaaagtcgtggcacgatgg 32279910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 1047503 - 1047361
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||  ||||||||||||||    
T  1047503 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgacggctgggcaacgtggcacgatggaggttttagttttttgggcaaggcactgga 1047404  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  1047403 aaaatcgtggcacgatggggtctcatcgtggcacgatggtgcg 1047361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 202 - 341
Target Start/End: Original strand, 3878322 - 3878461
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||||||| |||| |||||||||||||||||  |||||||||||||||| ||||||||||  ||| ||||||| |||||||    
T  3878322 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatggctgggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactgg 3878420  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggt 341  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3878421 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggt 3878461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 2935070 - 2935212
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  2935070 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 2935169  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2935170 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 2935212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 202 - 344
Target Start/End: Complemental strand, 9027687 - 9027545
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  9027687 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 9027588  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9027587 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 9027545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 22136878 - 22137020
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  22136878 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 22136977  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22136978 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 22137020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 40551905 - 40552047
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  40551905 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 40552004  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40552005 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 40552047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 22107867 - 22108009
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || ||||||||| |||||| |||||||  ||||||||||||||    
T  22107867 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatgcaggttttagttttttgggcaaggcactgga 22107966  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22107967 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 22108009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 40549627 - 40549769
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || ||||||||| |||||| |||||||  ||||||||||||||    
T  40549627 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatgcaggttttagttttttgggcaaggcactgga 40549726  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40549727 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 40549769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 40837261 - 40837144
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||||   | |||||||||||||||||||||||||||||| |||||||||||||||    
T  40837261 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggtcggacaacgtggcacgatggaggtttcagttttttaggcaaggcactgga 40837162  T
Q  302 aaaatcgtggcacgatgg 319  Q
    ||||||||||||||||||    
T  40837161 aaaatcgtggcacgatgg 40837144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 201 - 344
Target Start/End: Complemental strand, 27306768 - 27306626
Alignment:
Q  201 atgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactg 299  Q
    |||||||| ||||||| |||| || ||| |||| |||||||||||||||||  | |||||||||||||| ||||||||||||||| |||||||| || ||    
T  27306768 atgtgagagttaacttaaaataaggttt-tgcaaaatcgtggcacgatggctggacaacgtggcacgattggaggtttcagtttt-gaggcaagtcattg 27306671  T
Q  300 gaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  27306670 gaaaaatcgtggcacgatggggtcgcttcgtggcacgatggtgcg 27306626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 35412 - 35521
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35412 aatcgtggcacgattgctaggcaacgtggcacgattggaggtttcaagttt-gaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggc 35510  T
Q  334 acgatggtgcg 344  Q
     |||| |||||    
T  35511 ccgatcgtgcg 35521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 25542317 - 25542422
Alignment:
Q  239 gtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacga 337  Q
    |||||||||| ||  |||||||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  25542317 gtggcacgattgctgggcaacgtggcacgattggaggtttcagtttta-aggcaaggcacttgaaaaatcgtggcacgatgggatcgcatcgtggcacga 25542415  T
Q  338 tggtgcg 344  Q
    |||||||    
T  25542416 tggtgcg 25542422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 26804345 - 26804462
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactgg 300  Q
    ||||||| ||||||| ||||||| ||| | || |||||||||||||||||  |||||||||| ||||| ||||||||||||||| ||||||||||| |||    
T  26804345 tgtgagagttaacttaaaatcaggtttctacagaatcgtggcacgatggctgggcaacgtggtacgattggaggtttcagtttt-gaggcaaggcagtgg 26804443  T
Q  301 aaaaatcgtggcacgatgg 319  Q
    |||||||||||||||||||    
T  26804444 aaaaatcgtggcacgatgg 26804462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 44347 - 44456
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    ||||||||||||||  |  ||||| |||||||||| ||||||||||  ||| || |||| |||||||||||||| |||||||||||||||||||||||||    
T  44347 aatcgtggcacgatttctgggcaatgtggcacgattggaggtttcaagttt-gacgcaaagcactggaaaaatcatggcacgatggggtcgcatcgtggc 44445  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  44446 acgatggtgcg 44456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 1049780 - 1049699
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacga 316  Q
    |||||||||||||| ||  |||||||||||||||| ||||||||||||||| || |||||| |||||||||||||||||||||    
T  1049780 aatcgtggcacgattgctgggcaacgtggcacgattggaggtttcagtttt-gaagcaaggtactggaaaaatcgtggcacga 1049699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 344
Target Start/End: Original strand, 18567396 - 18567505
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||| ||  ||||| |||||||||| ||||||||||||||| |||||||| |||||||    |||||||||||||||||| || | ||||    
T  18567396 aatcgtggcacgatagctgggcaaagtggcacgattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcacgatggggtcacaacttggc 18567494  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  18567495 acgatggtgcg 18567505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 344
Target Start/End: Complemental strand, 31435553 - 31435444
Alignment:
Q  235 aatcgtggcacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggc 333  Q
    |||||||||||||| ||  ||||| |||||||||| ||||||||||||||| |||||||| |||||||    |||||||||||||||||| || | ||||    
T  31435553 aatcgtggcacgatagctgggcaaagtggcacgattggaggtttcagtttt-gaggcaagtcactggatttttcgtggcacgatggggtcacaacttggc 31435455  T
Q  334 acgatggtgcg 344  Q
    |||||||||||    
T  31435454 acgatggtgcg 31435444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 40946167 - 40946216
Alignment:
Q  295 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||| |||||| || ||| |||||| ||||||||||||    
T  40946167 cactggaaaaatcgtgtcacgattggatcgaatcgtgccacgatggtgcg 40946216  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 42006404 - 42006456
Alignment:
Q  289 gcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggt 341  Q
    ||||| ||||| |||||||||||||||||||  ||| | ||||||||||||||    
T  42006404 gcaagtcactgaaaaaatcgtggcacgatggaatcgtaacgtggcacgatggt 42006456  T

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Target: scaffold0140 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 21915 - 22057
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  21915 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 22014  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22015 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 22057  T

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Target: scaffold0140; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 24190 - 24332
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||  ||  |||  || |||||||||||||||| |||||||  ||||||||||||||    
T  24190 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacagctgggcttcgcggcacgatggaggttttagttttttgggcaaggcactgga 24289  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24290 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 24332  T

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Target: scaffold0472 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 5927 - 6069
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacgatggaggtttcagtttttgaggcaaggcactgga 301  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||| |||  |||  || |||||||||||||||| ||||||| |||||||||||||||    
T  5927 tgtgagagttaacttaaaatcaggtttctgcacaatcgtggcacgacggctgggcttcgcggcacgatggaggttttagttttttaggcaaggcactgga 6026  T
Q  302 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||||||||||| ||||||||| |||| |||||||||||||||    
T  6027 aaaatcgtggcatgatggggtctcatcatggcacgatggtgcg 6069  T

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Target: scaffold0025 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 210 - 342
Target Start/End: Complemental strand, 69825 - 69693
Alignment:
Q  210 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcg 308  Q
    ||||||| ||||||||||| |||| ||||||||||||||||| |||||||||||||||| |||||||||||   |||||||||| |||||||||||||||    
T  69825 ttaacttaaaatcagatttctgcagaatcgtggcacgatggctaggcaacgtggcacgattggaggtttca-agtttgaggcaaagcactggaaaaatcg 69727  T
Q  309 tggcacgatggggtcgcatcgtggcacgatggtg 342  Q
    | |||| ||||| ||||||||| |||||||||||    
T  69726 tagcacaatgggatcgcatcgttgcacgatggtg 69693  T

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Target: scaffold0025; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 210 - 319
Target Start/End: Complemental strand, 73536 - 73427
Alignment:
Q  210 ttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcacga-tggaggtttcagtttttgaggcaaggcactggaaaaatcg 308  Q
    ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||   |||||||||| ||||||||||||| |    
T  73536 ttaacttaaaatcagatttatgcagaatcgtggcacgatggctaggcaacgtggcacgattggaggtttca-agtttgaggcaaagcactggaaaaattg 73438  T
Q  309 tggcacgatgg 319  Q
    |||||||||||    
T  73437 tggcacgatgg 73427  T

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Target: scaffold0250 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 243 - 344
Target Start/End: Original strand, 2670 - 2771
Alignment:
Q  243 cacgatggcaaggcaacgtggcacgat-ggaggtttcagtttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggt 341  Q
    |||||| || ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  2670 cacgattgctaggcaacgtggcacgattggaggtttcagtttt-gaggcaaggtactggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggt 2768  T
Q  342 gcg 344  Q
    |||    
T  2769 gcg 2771  T

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Target: scaffold0068 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 29001 - 29052
Alignment:
Q  293 ggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29001 ggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 29052  T

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Target: scaffold0068; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 28941 - 29005
Alignment:
Q  202 tgtgagatttaacttcaaatcagatttatgcataatcgtggcacgatggcaaggcaacgtggcac 266  Q
    ||||||| ||||||| ||||||| ||| |||| |||||||||||||||||  |||||||||||||    
T  28941 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggctgggcaacgtggcac 29005  T

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Target: scaffold0131 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 344
Target Start/End: Original strand, 14768 - 14910
Alignment:
Q  203 gtgagatttaacttcaaatcagatttatgcat-aatcgtggcacgatggcaaggcaacgtggcacgatgg-aggtttcagtttttgaggcaaggcactgg 300  Q
    |||||| ||||||| |||||||  || ||||  |||||||||||||| | | |||||||||| ||||||| | ||||||||| | |||||||| ||||||    
T  14768 gtgagagttaacttaaaatcaggattctgcaggaatcgtggcacgattgaagggcaacgtggaacgatgggaagtttcagttat-gaggcaagtcactgg 14866  T
Q  301 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcg 344  Q
    |||  ||||||||||||||| || || |||| ||||||||||||    
T  14867 aaatttcgtggcacgatgggatcacaacgtgacacgatggtgcg 14910  T

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