View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8902_low_18 (Length: 415)

Name: NF8902_low_18
Description: NF8902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8902_low_18
NF8902_low_18
[»] chr2 (35 HSPs)
chr2 (91-398)||(4080257-4080566)
chr2 (194-313)||(21286386-21286505)
chr2 (158-312)||(37560116-37560270)
chr2 (184-309)||(7747220-7747345)
chr2 (184-305)||(39806920-39807041)
chr2 (177-309)||(18649054-18649186)
chr2 (184-296)||(25540439-25540551)
chr2 (184-315)||(10026651-10026782)
chr2 (184-315)||(10046512-10046642)
chr2 (198-305)||(19976856-19976963)
chr2 (198-309)||(38962709-38962820)
chr2 (158-307)||(6358160-6358309)
chr2 (240-309)||(38005348-38005417)
chr2 (160-256)||(3848925-3849021)
chr2 (198-309)||(3643936-3644047)
chr2 (194-309)||(11069824-11069939)
chr2 (158-309)||(12864170-12864321)
chr2 (158-309)||(18902539-18902690)
chr2 (194-309)||(42770696-42770811)
chr2 (158-309)||(44139430-44139581)
chr2 (184-282)||(15234096-15234194)
chr2 (184-302)||(25549681-25549799)
chr2 (184-317)||(8410069-8410202)
chr2 (239-312)||(30929293-30929366)
chr2 (160-312)||(45263678-45263830)
chr2 (157-232)||(31088357-31088432)
chr2 (195-309)||(5035234-5035348)
chr2 (194-280)||(9360793-9360879)
chr2 (158-308)||(20963119-20963268)
chr2 (159-309)||(34356152-34356302)
chr2 (184-309)||(13026446-13026571)
chr2 (184-309)||(22593081-22593205)
chr2 (198-295)||(41220595-41220692)
chr2 (241-309)||(29422161-29422229)
chr2 (158-282)||(34346296-34346420)
[»] chr3 (32 HSPs)
chr3 (156-309)||(51682962-51683115)
chr3 (184-309)||(54261172-54261297)
chr3 (158-309)||(45877400-45877551)
chr3 (158-251)||(50405613-50405706)
chr3 (184-309)||(11687145-11687270)
chr3 (184-309)||(32873585-32873709)
chr3 (158-250)||(24506658-24506749)
chr3 (156-247)||(2029275-2029366)
chr3 (158-269)||(4638140-4638251)
chr3 (158-309)||(13893872-13894023)
chr3 (225-308)||(22405620-22405703)
chr3 (194-305)||(49543469-49543580)
chr3 (158-309)||(55069689-55069840)
chr3 (158-256)||(28572221-28572319)
chr3 (192-309)||(35923667-35923784)
chr3 (184-309)||(15320132-15320257)
chr3 (204-309)||(25294906-25295011)
chr3 (176-309)||(40944829-40944961)
chr3 (184-309)||(48341966-48342091)
chr3 (158-282)||(15795504-15795627)
chr3 (184-311)||(6462356-6462483)
chr3 (194-309)||(10040503-10040617)
chr3 (194-305)||(47749151-47749261)
chr3 (240-307)||(49082772-49082839)
chr3 (195-309)||(10855330-10855444)
chr3 (175-309)||(42412801-42412935)
chr3 (184-309)||(928546-928671)
chr3 (184-309)||(3755516-3755641)
chr3 (158-231)||(26361977-26362050)
chr3 (159-256)||(30045820-30045917)
chr3 (184-308)||(3136730-3136853)
chr3 (198-314)||(51060331-51060447)
[»] chr4 (28 HSPs)
chr4 (159-308)||(5472858-5473007)
chr4 (184-309)||(24166401-24166526)
chr4 (156-309)||(47078409-47078562)
chr4 (156-309)||(48317282-48317435)
chr4 (158-309)||(38165978-38166129)
chr4 (198-309)||(53599011-53599122)
chr4 (183-309)||(29588687-29588813)
chr4 (184-309)||(43458564-43458689)
chr4 (159-254)||(26237432-26237527)
chr4 (204-282)||(36145270-36145348)
chr4 (184-309)||(1446777-1446902)
chr4 (158-309)||(1940786-1940934)
chr4 (184-309)||(29895738-29895863)
chr4 (184-283)||(21429278-21429377)
chr4 (198-309)||(38075384-38075495)
chr4 (184-309)||(27248379-27248502)
chr4 (176-309)||(3574473-3574606)
chr4 (197-309)||(2559258-2559370)
chr4 (226-306)||(13552068-13552148)
chr4 (184-276)||(20128293-20128385)
chr4 (158-282)||(42722586-42722710)
chr4 (158-309)||(55920985-55921136)
chr4 (158-276)||(7246655-7246773)
chr4 (184-282)||(49952181-49952279)
chr4 (184-309)||(8888973-8889098)
chr4 (240-309)||(27531748-27531817)
chr4 (245-313)||(6032736-6032804)
chr4 (241-309)||(41162974-41163042)
[»] chr8 (25 HSPs)
chr8 (158-309)||(14666080-14666231)
chr8 (186-316)||(13085467-13085597)
chr8 (158-309)||(45521119-45521269)
chr8 (188-309)||(14846526-14846646)
chr8 (158-314)||(6100417-6100573)
chr8 (184-308)||(18373961-18374085)
chr8 (158-314)||(44893287-44893443)
chr8 (181-308)||(17981392-17981519)
chr8 (188-282)||(20240547-20240641)
chr8 (188-282)||(20252426-20252520)
chr8 (184-309)||(3418548-3418673)
chr8 (198-309)||(1013026-1013137)
chr8 (198-309)||(8141052-8141163)
chr8 (186-309)||(34846764-34846886)
chr8 (184-309)||(583764-583887)
chr8 (184-314)||(43027250-43027380)
chr8 (184-309)||(10927556-10927681)
chr8 (241-309)||(2467210-2467278)
chr8 (184-308)||(33401834-33401958)
chr8 (194-309)||(38922459-38922574)
chr8 (158-312)||(68107-68261)
chr8 (226-256)||(28319315-28319345)
chr8 (192-309)||(13358972-13359089)
chr8 (204-305)||(34613833-34613934)
chr8 (241-309)||(6940508-6940576)
[»] chr7 (26 HSPs)
chr7 (159-309)||(16802072-16802222)
chr7 (158-282)||(21190789-21190913)
chr7 (158-309)||(34659175-34659326)
chr7 (184-309)||(26423322-26423447)
chr7 (194-313)||(1797405-1797524)
chr7 (194-306)||(4706029-4706141)
chr7 (188-282)||(44336869-44336963)
chr7 (184-309)||(43862007-43862132)
chr7 (158-282)||(365116-365240)
chr7 (158-309)||(5039427-5039578)
chr7 (198-309)||(18785618-18785729)
chr7 (198-309)||(43925461-43925572)
chr7 (194-309)||(47341825-47341940)
chr7 (158-309)||(48804632-48804783)
chr7 (184-309)||(17748417-17748542)
chr7 (184-309)||(22973916-22974041)
chr7 (176-309)||(22993394-22993527)
chr7 (226-306)||(9685691-9685771)
chr7 (160-256)||(49142680-49142776)
chr7 (241-312)||(5069907-5069978)
chr7 (240-309)||(19914793-19914862)
chr7 (264-309)||(22268144-22268189)
chr7 (156-309)||(43346786-43346939)
chr7 (185-309)||(4195238-4195362)
chr7 (194-282)||(37514897-37514985)
chr7 (240-308)||(42032046-42032114)
[»] chr6 (15 HSPs)
chr6 (182-308)||(11142554-11142680)
chr6 (184-314)||(21898593-21898723)
chr6 (184-309)||(14107393-14107518)
chr6 (198-309)||(9179785-9179896)
chr6 (159-306)||(10311479-10311626)
chr6 (198-309)||(8612023-8612134)
chr6 (184-309)||(13036039-13036164)
chr6 (185-261)||(33859355-33859431)
chr6 (226-309)||(8938661-8938744)
chr6 (198-309)||(29333188-29333298)
chr6 (239-309)||(2271391-2271461)
chr6 (263-309)||(3030732-3030778)
chr6 (157-269)||(8888872-8888984)
chr6 (240-312)||(9147248-9147320)
chr6 (157-305)||(34954627-34954774)
[»] chr5 (32 HSPs)
chr5 (156-309)||(4016262-4016415)
chr5 (184-309)||(23247386-23247511)
chr5 (158-309)||(2485144-2485294)
chr5 (184-309)||(5731955-5732080)
chr5 (184-313)||(35813033-35813162)
chr5 (241-312)||(18327714-18327785)
chr5 (184-309)||(8513466-8513591)
chr5 (156-309)||(19572671-19572824)
chr5 (198-309)||(12704961-12705072)
chr5 (226-301)||(16755016-16755091)
chr5 (186-309)||(26077088-26077211)
chr5 (195-305)||(35403558-35403668)
chr5 (184-309)||(3653949-3654072)
chr5 (184-309)||(12766078-12766203)
chr5 (240-309)||(18136371-18136440)
chr5 (184-309)||(42086274-42086399)
chr5 (198-314)||(1538373-1538489)
chr5 (225-309)||(9812819-9812903)
chr5 (158-230)||(14728109-14728181)
chr5 (184-231)||(7616945-7616992)
chr5 (194-269)||(12081895-12081970)
chr5 (182-313)||(20692876-20693007)
chr5 (184-247)||(35638068-35638131)
chr5 (235-309)||(6767137-6767211)
chr5 (195-309)||(7866528-7866642)
chr5 (184-302)||(25417218-25417336)
chr5 (184-237)||(19839346-19839399)
chr5 (184-249)||(22655192-22655257)
chr5 (204-309)||(30349526-30349631)
chr5 (176-309)||(39728334-39728467)
chr5 (240-309)||(41163550-41163619)
chr5 (194-282)||(25467384-25467472)
[»] chr1 (29 HSPs)
chr1 (184-309)||(5855469-5855594)
chr1 (184-309)||(17642040-17642165)
chr1 (186-309)||(12036782-12036905)
chr1 (184-309)||(10422735-10422860)
chr1 (186-301)||(9853315-9853430)
chr1 (158-309)||(33004025-33004176)
chr1 (198-309)||(41663906-41664017)
chr1 (158-309)||(49078061-49078212)
chr1 (158-309)||(50503371-50503522)
chr1 (156-282)||(16956440-16956566)
chr1 (227-309)||(31576626-31576708)
chr1 (184-309)||(48798106-48798231)
chr1 (184-312)||(47312935-47313062)
chr1 (185-312)||(2567220-2567347)
chr1 (166-309)||(18915814-18915957)
chr1 (159-282)||(34719750-34719873)
chr1 (184-309)||(2980967-2981092)
chr1 (184-309)||(33418151-33418276)
chr1 (158-250)||(38859126-38859218)
chr1 (184-308)||(43959857-43959981)
chr1 (206-302)||(45361940-45362036)
chr1 (187-309)||(34877937-34878059)
chr1 (158-231)||(5143164-5143236)
chr1 (184-309)||(11397925-11398049)
chr1 (158-231)||(13262108-13262181)
chr1 (184-309)||(26660085-26660210)
chr1 (184-309)||(31152663-31152788)
chr1 (240-312)||(34334387-34334459)
chr1 (194-266)||(48761166-48761238)
[»] scaffold0002 (1 HSPs)
scaffold0002 (158-309)||(519-670)
[»] scaffold0006 (1 HSPs)
scaffold0006 (158-309)||(68466-68614)
[»] scaffold0209 (1 HSPs)
scaffold0209 (184-309)||(12524-12647)
[»] scaffold0029 (1 HSPs)
scaffold0029 (184-309)||(40993-41118)
[»] scaffold0376 (1 HSPs)
scaffold0376 (165-309)||(12619-12763)


Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 91 - 398
Target Start/End: Original strand, 4080257 - 4080566
Alignment:
Q  91 gttgagtccaagcatttctccttgtaggctcgtccacatcagtcatccc-gtaccannnnnnnnnc-ctggttttcgacccatcattggtgagcaactaa 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||           ||||||||||||||| |||||||||||||||||    
T  4080257 gttgagtccaagcatttctccttgtaggctcgtccacatcagtcatccccgtaccattttttttttactggttttcgacccaccattggtgagcaactaa 4080356  T
Q  189 tctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgc 288  Q
    ||||| |||||||||||||||||||||||| |||| |||||||| |  ||||||||||| ||||||||||| |||||||||||||||| ||||||| ||     
T  4080357 tctgattcgtgcgtggaggcatgcgtactggtcaagcgttgttttttataagaatcgaatccagtatttcccggatacgtcattggaaggagcttctcgt 4080456  T
Q  289 cactggagcccaaacaacttgattaccccgtaccatttttattattggaaactaattaaacagcaaccaacatccatgaagttgtctccattccaacgtg 388  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4080457 cactggagtccaaacaacttgattaccccgtaccatttttattattgaaaactaattaaacagcaaccaacatccatgaagttgtctccattccaacgtg 4080556  T
Q  389 tcaacaacat 398  Q
    ||||||||||    
T  4080557 tcaacaacat 4080566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 313
Target Start/End: Complemental strand, 21286505 - 21286386
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactg 293  Q
    ||||||||| |||||||||| |||| |||| ||||||||| |||  ||||||||||| ||||| || ||||||||| |||||| ||||| |  |||||||    
T  21286505 ctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccactg 21286406  T
Q  294 gagcccaaacaacttgatta 313  Q
    |||| |||||||||||||||    
T  21286405 gagctcaaacaacttgatta 21286386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 37560270 - 37560116
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||||||||||||||  ||||  | | ||||| | ||||||||| |||||||||| ||||| ||||||||||| | | | |||||||||||  |||||     
T  37560270 ggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaacctggtattc 37560171  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttgatt 312  Q
    |  || |||||| |||||| |||||||   |||||||||||||||||||||||||    
T  37560170 ctcgggtacgtccttggaaggagcttcttaccactggagcccaaacaacttgatt 37560116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 7747345 - 7747220
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||  ||||  ||||||||||| |||||| ||||||||||| ||||| || ||||||||| |||||| |||||     
T  7747345 actaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaacccggtattccccggatacgtccttggaaggagctc 7747246  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||||||||||| |||||||    
T  7747245 cttgccactggagcccaagcaacttg 7747220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 305
Target Start/End: Original strand, 39806920 - 39807041
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| |||||||| || |||||||||| ||||  ||||||||||||||| |  ||||||||||| ||||| || || |||||| ||| || |||| |    
T  39806920 actaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaacccggtattccccgggtacgtccttgtaaggagcat 39807019  T
Q  284 cccgccactggagcccaaacaa 305  Q
    |  |||||||||||||||||||    
T  39807020 cttgccactggagcccaaacaa 39807041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 309
Target Start/End: Original strand, 18649054 - 18649186
Alignment:
Q  177 gtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaa 276  Q
    |||||| ||||||| ||||| ||||| |||||||||| ||||  ||||  ||||| ||||| ||||||||| || ||||| |||| || | || ||||||    
T  18649054 gtgagcgactaatccgactcatgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaatcgaatccggtattccctgaatgcatccttggaa 18649153  T
Q  277 tgagcttcccgccactggagcccaaacaacttg 309  Q
      ||||||  |||||||||||||||||||||||    
T  18649154 gcagcttcttgccactggagcccaaacaacttg 18649186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 25540439 - 25540551
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||||||| |||||||||| ||||  ||| ||||||| | |||| ||||||||||||||||| ||  |||||||| ||||||||||||     
T  25540439 actaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaacccagtattccccagatacgtccttggaatgagctc 25540538  T
Q  284 cccgccactggag 296  Q
    |  ||||||||||    
T  25540539 cttgccactggag 25540551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 315
Target Start/End: Original strand, 10026651 - 10026782
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| ||||  ||||||||||| | ||| |||||||||||| |||||| | |  |||||| |||||| |||||     
T  10026651 actaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtattttccgagtacgtccttggaaggagctc 10026750  T
Q  284 cccgccactggagcccaaacaacttgattacc 315  Q
    |  |||| |||||||||| ||||||| |||||    
T  10026751 cttgccattggagcccaagcaacttggttacc 10026782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 315
Target Start/End: Original strand, 10046512 - 10046642
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| |||| |||||||||||||| | | |||||||||||| |||||  | ||||||||  |||||| |||||     
T  10046512 actaatccggctcatgcgtagaggcatgcgcactg-tcaaacgttgtttcccttgagaatcgaacccggtattctccggatacgttcttggaaggagctc 10046610  T
Q  284 cccgccactggagcccaaacaacttgattacc 315  Q
    |  |||| |||||||||| ||||||| |||||    
T  10046611 cttgccattggagcccaagcaacttggttacc 10046642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 305
Target Start/End: Original strand, 19976856 - 19976963
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| ||| |||||| ||||| |||||||| || | ||| | |||||||||| ||||| || ||||||||| |||||| ||||| |  |||||||||||    
T  19976856 tgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaacccggtattccccggatacgtccttggaaagagctacttgccactggagc 19976955  T
Q  298 ccaaacaa 305  Q
    ||||||||    
T  19976956 ccaaacaa 19976963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 38962820 - 38962709
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||||||||| ||||  ||| ||||||| ||||| | |||||||||| ||||| || ||||||||| ||| |||||||| |   |||||||||     
T  38962820 tgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtattccccggatacgtccttgaaatgagctccttaccactggagt 38962721  T
Q  298 ccaaacaacttg 309  Q
    ||||||||||||    
T  38962720 ccaaacaacttg 38962709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 307
Target Start/End: Original strand, 6358160 - 6358309
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||||||||||| || |||||  | ||||||| | ||| ||||| |||||||||| ||||  |||  |||||| | |||   ||||||| |  |||||     
T  6358160 ggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggtattc 6358259  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaact 307  Q
    || ||||||||| || |||||||||||  |||||||||||||||||||||    
T  6358260 cccggatacgtcctttgaatgagcttcttgccactggagcccaaacaact 6358309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 38005417 - 38005348
Alignment:
Q  240 gaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    ||||||||||||||||| || || |||||| |||||| ||||| |  |||||||||||||||||||||||    
T  38005417 gaatcgaacccagtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttg 38005348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 3848925 - 3849021
Alignment:
Q  160 ttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatt 256  Q
    ||||||||||||||  ||||| | ||||||| ||||||||||| ||| ||||||  |||  ||||||||||||| ||| | |||||||||| |||||    
T  3848925 ttttcgacccatcaaaggtgaacgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgtttcccctgataatcgaacccggtatt 3849021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 309
Target Start/End: Original strand, 3643936 - 3644047
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||||||||| ||||  ||| ||||||| ||| ||  |||| ||||| ||||| || ||||||||| |||||||||||| |   ||||||||||    
T  3643936 tgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaacccggtattccccggatacgtccttggaatgagctcctttccactggagc 3644035  T
Q  298 ccaaacaacttg 309  Q
    |||| |||||||    
T  3644036 ccaagcaacttg 3644047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 11069939 - 11069824
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactg 293  Q
    ||||||||| |||| ||||| ||||  ||||||||||| | |||  ||||||||||  ||||| || || |||||| |||||||||||| |  |||| ||    
T  11069939 ctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaacctggtattccccgggtacgtccttggaatgagctcctagccattg 11069840  T
Q  294 gagcccaaacaacttg 309  Q
    ||||| ||||||||||    
T  11069839 gagccaaaacaacttg 11069824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 12864321 - 12864170
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||| || |||||  | ||||||||| ||| ||||  |||||||||| ||||| |||  |||||| | |||   ||||||| || |||||     
T  12864321 ggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaatccggtattc 12864222  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || | |||||||||||||| ||||| |  | |||||||||||||||||||||    
T  12864221 cccgaatacgtcattggaaggagctccttgtcactggagcccaaacaacttg 12864170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 309
Target Start/End: Original strand, 18902539 - 18902690
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||| ||  |||| || ||||||||| ||||||||| ||| || ||| |||| |||| ||||||| | | |  ||||||||||| |||||     
T  18902539 ggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaacccggtattc 18902638  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || |  |||||| |||||| ||||| |  ||||||||||||||| |||||||    
T  18902639 cccgagtacgtccttggaaggagctccttgccactggagcccaagcaacttg 18902690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 42770696 - 42770811
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactg 293  Q
    ||||||||  |||||||||| ||||  ||| ||||||| | ||| ||||| |||||| |||||||  ||||||||| |||||| |||||    |||||||    
T  42770696 ctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaacccggtatttctcggatacgtccttggaaggagctctttgccactg 42770795  T
Q  294 gagcccaaacaacttg 309  Q
    |||||||| |||||||    
T  42770796 gagcccaagcaacttg 42770811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 44139581 - 44139430
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||| |||||||| || ||||||| | ||||||||| |||||| ||| ||||  ||| ||||||| | |||  ||||||||||| |||||     
T  44139581 ggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaacccggtattc 44139482  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    ||  ||| | || |||||| ||| | | | |||||||||||||| |||||||    
T  44139481 cccagatgcatccttggaaggagttcctcaccactggagcccaagcaacttg 44139430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 15234096 - 15234194
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagct 282  Q
    |||||||| ||| |||||| |||||||||| |||| ||||  |||||| | ||| ||||||||||| |||||| || || |||||| |||||| |||||    
T  15234096 actaatctaacttgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgagaatcgaacctagtattccccgggtacgtccttggaaggagct 15234194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 25549799 - 25549681
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||||||| |||||||| | |||   |||| |||||||  |||||||||||||||||||||| ||   ||||||  |||||| |||||     
T  25549799 actaatccggctcgtgcgtagaggcatgtgcactagccaaatgttgttttccctaagaatcgaacccagtattccccaaatacgtacttggaaggagctc 25549700  T
Q  284 cccgccactggagcccaaa 302  Q
    |  ||||||||||||||||    
T  25549699 cttgccactggagcccaaa 25549681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 8410202 - 8410069
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||||||| |||||||||| ||||  |||  |||||| | |||  |||||||||||  ||||  | || |||||| |||||| |||||     
T  8410202 actaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctc 8410103  T
Q  284 cccgccactggagcccaaacaacttgattacccc 317  Q
    |  ||||||||||||||| ||||||| |||||||    
T  8410102 cttgccactggagcccaagcaacttggttacccc 8410069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 30929366 - 30929293
Alignment:
Q  239 agaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttgatt 312  Q
    ||||||||||||   ||||||||  ||||||||||||| |||||||    ||||||||||||||||||||||||    
T  30929366 agaatcgaacccgacatttcctgagtacgtcattggaaggagcttcttatcactggagcccaaacaacttgatt 30929293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 312
Target Start/End: Original strand, 45263678 - 45263830
Alignment:
Q  160 ttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcc 259  Q
    ||||||||||| ||  | ||||| | ||||| | ||||||||| |||||||||| ||||  ||| ||||||| |  ||  ||||||||||| ||||| ||    
T  45263678 ttttcgacccaccaaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccc 45263777  T
Q  260 tggatacgtcattggaatgagcttcccgccactggagcccaaacaacttgatt 312  Q
     |||||  |  ||| || ||||| |  ||||||||||||||||||||||||||    
T  45263778 cggataaatttttgaaaggagctccttgccactggagcccaaacaacttgatt 45263830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 31088432 - 31088357
Alignment:
Q  157 tggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgttt 232  Q
    |||||| |||||||||| ||||| |   |||||||||||| ||||| ||||||||| ||||| |||| ||||||||    
T  31088432 tggtttccgacccatcaatggtgggtggctaatctgactcatgcgtagaggcatgcatactgttcaagcgttgttt 31088357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 309
Target Start/End: Complemental strand, 5035348 - 5035234
Alignment:
Q  195 tcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactgg 294  Q
    |||||||| ||| |||||| |||| |||| | |||||| | ||  |||||||||||| ||||| | ||||||||  || |||  |||| |  ||||||||    
T  5035348 tcgtgcgtagagacatgcgcactggtcaagcattgttttttctgggaatcgaacccaatattttccggatacgttcttagaagcagctccgtgccactgg 5035249  T
Q  295 agcccaaacaacttg 309  Q
    |||||||||||||||    
T  5035248 agcccaaacaacttg 5035234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 280
Target Start/End: Original strand, 9360793 - 9360879
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgag 280  Q
    ||||||||| |||||||||| ||||  |||||||||||||  |||  |||||||||  ||||| || || |||||| ||||||||||    
T  9360793 ctcgtgcgtagaggcatgcgcactggccaaacgttgtttcctctagtaatcgaacctggtattccccgggtacgtccttggaatgag 9360879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 308
Target Start/End: Original strand, 20963119 - 20963268
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||||||||||||||  |||| || ||||||||| ||| | ||| ||||||||   | || ||||  |||||||||  |   |||||||| | |||||     
T  20963119 ggttttcgacccatcaaaggtgggcgactaatctgcctcatacgtagaggcatgtacattggtcaagtgttgtttcttttggaaatcgaactc-gtattc 20963217  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaactt 308  Q
    || |||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  20963218 cccggatacgtcattggaaggaggtccttgccactggagcccaaacaactt 20963268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 309
Target Start/End: Complemental strand, 34356302 - 34356152
Alignment:
Q  159 gttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttc 258  Q
    |||| |||||||||| |||||  | | ||||| | ||| ||| | |||||||||| ||||| |||  |||||| | |||   |||||||||| ||||| |    
T  34356302 gtttccgacccatcaatggtgcacgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattcc 34356203  T
Q  259 ctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    |  |||||||| ||||||  |||| |  |||||||||||||||||||||||    
T  34356202 ccagatacgtccttggaaatagctccttgccactggagcccaaacaacttg 34356152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 13026446 - 13026571
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| ||||  ||| | ||||| ||||| | ||||||||||  |||| |||||||||||| |||||| ||| |     
T  13026446 actaatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaacccgatattccctggatacgtccttggaaggagttc 13026545  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||||||  ||| |||||||    
T  13026546 cttgccactggagttcaatcaacttg 13026571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 22593205 - 22593081
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| ||||  ||| ||||||| | |||  ||||||||| ||||||| || || |||||| |||||| |||||     
T  22593205 actaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaatcgaactcagtattccccgggtacgtccttggaaggagctc 22593107  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||||||| ||| |||||||    
T  22593106 cttgccactggagcacaagcaacttg 22593081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 41220692 - 41220595
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactgga 295  Q
    ||||| |||||||||| ||||  ||| ||||||| |||||  ||||||||||| ||||| || || |||||| |||||| ||||| |  |||||||||    
T  41220692 tgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactgga 41220595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 29422229 - 29422161
Alignment:
Q  241 aatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    |||||||||||||||| || || |||||| ||| || ||||| |  || ||||||||||||||||||||    
T  29422229 aatcgaacccagtattccccgggtacgtccttgaaaggagctccttgctactggagcccaaacaacttg 29422161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 34346296 - 34346420
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||| ||  ||||||| | ||||||||||| ||||| |||||||||  ||||  |||  |||||| | ||| | |||| |||||||||||     
T  34346296 ggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaagtgttgttccccctgataatcaaacccagtattc 34346395  T
Q  258 cctggatacgtcattggaatgagct 282  Q
    ||  | |||||| ||||||||||||    
T  34346396 cccaggtacgtccttggaatgagct 34346420  T

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Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 156 - 309
Target Start/End: Original strand, 51682962 - 51683115
Alignment:
Q  156 ctggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtat 255  Q
    ||||||| ||||||| |||||||| || ||||||| | |||||| |  |||||||||| |||| |||| ||||||| | |||  ||||||||||  ||||    
T  51682962 ctggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggtat 51683061  T
Q  256 ttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    | || ||||||||| |||||| ||||| | ||||||||||||||||||||||||    
T  51683062 tccccggatacgtctttggaaggagctcctcgccactggagcccaaacaacttg 51683115  T

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Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 54261297 - 54261172
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| ||||  ||| ||||||| |||||| ||||||||||| ||||| ||  | |||||| |||||| |||||     
T  54261297 actaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccaggtacgtccttggaaggagctc 54261198  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||||||||||||||||||||    
T  54261197 cttgccactggagcccaaacaacttg 54261172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 45877551 - 45877400
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| |||||||||| |||||| | ||||||| | ||| ||||| |||||||| | ||||  |||  |||||||| |||   |||||||||| |||||     
T  45877551 ggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtattc 45877452  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || ||||||||| |||||| | ||| |  |||||||||||||||||||||||    
T  45877451 cccggatacgtccttggaaggggctccttgccactggagcccaaacaacttg 45877400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 50405613 - 50405706
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaaccca 251  Q
    ||||| ||||||| || ||||| || ||||||| ||||||||||| |||||||||| |||| |||| ||||||||| |||  ||||||||||||    
T  50405613 ggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttcccctcggaatcgaaccca 50405706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 11687145 - 11687270
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatt-tcctggatacgtcattggaatgagct 282  Q
    ||||||||||||| | ||| |||||||||| ||||  ||| | ||||| | ||| |||||| ||||| ||||| ||| || |||||| |||||| |||||    
T  11687145 actaatctgactcatacgtagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccagg-tacgtccttggaaggagct 11687243  T
Q  283 tcccgccactggagcccaaacaacttg 309  Q
    ||  |||||||||||||||||||||||    
T  11687244 tcttgccactggagcccaaacaacttg 11687270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 32873585 - 32873709
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||||| ||| | ||| |||||||| | |||| |||| |||||||   |||| ||||||||||  ||||| || || |||||| ||||||||||||     
T  32873585 actaatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtattcccggg-tacgtccttggaatgagctc 32873683  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||||||||||||||||||||    
T  32873684 cttgccactggagcccaaacaacttg 32873709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 250
Target Start/End: Original strand, 24506658 - 24506749
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaaccc 250  Q
    ||||| ||||||| || |||||||| ||||||||||||| ||||| |||||||| | |||| |||| ||||||||| ||| | ||||||||||    
T  24506658 ggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgttgtttc-cctgaaaatcgaaccc 24506749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 247
Target Start/End: Original strand, 2029275 - 2029366
Alignment:
Q  156 ctggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaa 247  Q
    ||||||| |||||||||| ||||| || |||||||   ||| ||||| |||||||||||||| | ||| ||||||||||||| | |||||||    
T  2029275 ctggtttgcgacccatcaatggtgggcgactaatccagctcatgcgtagaggcatgcgtactaaccaagcgttgtttctcctgaaaatcgaa 2029366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 4638251 - 4638140
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| |||||||| |  |||| || ||||||| | ||||||||| |||| ||||| |||| |||| |||||||||||||  |||||||||| | |||||    
T  4638251 ggtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttctcctgggaatcgaacctattattt 4638152  T
Q  258 cctggatacgtc 269  Q
    ||  ||||||||    
T  4638151 ccaagatacgtc 4638140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 13894023 - 13893872
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||||||| ||| ||  |||| || ||||||| | |||||| || |||||||||| | ||| ||| ||||||| | |||   |||| ||||| |||||     
T  13894023 ggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaacccggtattc 13893924  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || ||| ||||| |||||| ||||| |  |||||||||||||||||||||||    
T  13893923 cccggacacgtccttggaaggagctccttgccactggagcccaaacaacttg 13893872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 22405620 - 22405703
Alignment:
Q  225 cgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaactt 308  Q
    ||||||| ||||| ||||| ||| || |||||||  |||||||||||||| | ||||| |  ||||||||||||||||||||||    
T  22405620 cgttgttcctcctgagaatagaatccggtatttcacggatacgtcattggtaggagctccttgccactggagcccaaacaactt 22405703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 305
Target Start/End: Complemental strand, 49543580 - 49543469
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactg 293  Q
    ||||||||| |||||||||  ||||| ||||||||||| | | | ||||||||||||  |||| || ||||||||| |||||| ||||| |  ||||||     
T  49543580 ctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaacccgatattcccgggatacgtccttggaaggagctccttgccacta 49543481  T
Q  294 gagcccaaacaa 305  Q
     |||||||||||    
T  49543480 aagcccaaacaa 49543469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 309
Target Start/End: Original strand, 55069689 - 55069840
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||| ||  ||||||| | ||||| | ||||||||| |||||||| | ||||  ||||||||||| |   || ||||| |||||||||||     
T  55069689 ggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttccctataggaatcaaacccagtattc 55069788  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    |||| ||||||| ||| || |||||    | |||||||||||||||||||||    
T  55069789 cctgaatacgtccttgaaaagagctcattgtcactggagcccaaacaacttg 55069840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 28572221 - 28572319
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatt 256  Q
    ||||| ||||||| ||  |||| || ||||||| | ||||||||| ||||||||| |||||  ||| ||||||||| |||  |||||||||||||||||    
T  28572221 ggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaacccagtatt 28572319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 309
Target Start/End: Original strand, 35923667 - 35923784
Alignment:
Q  192 gactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatt-tcctggatacgtcattggaatgagcttcccgcca 290  Q
    ||||||||| | |||||||||| ||||  ||||||||||| | |||| ||||||||||  ||||| ||| || |||||| ||||||||||||    ||||    
T  35923667 gactcgtgcttagaggcatgcgcactggccaaacgttgttccccctatgaatcgaacctggtattctccagg-tacgtccttggaatgagctcattgcca 35923765  T
Q  291 ctggagcccaaacaacttg 309  Q
    || ||||||||||||||||    
T  35923766 ctagagcccaaacaacttg 35923784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 15320257 - 15320132
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||||||| |||||||||  ||||  ||| | ||||| |||||   |||||||||| ||||| || || |||||| |||||| |||||     
T  15320257 actaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaacccggtattccccgggtacgtccttggaaggagctc 15320158  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||||||| ||||||||||||    
T  15320157 cttgccactggagtccaaacaacttg 15320132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 25295011 - 25294906
Alignment:
Q  204 gaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaac 303  Q
    |||||||||| ||||  |||  |||||||| ||  |||||| ||||| ||||| || ||||||||| |||||| ||||| |  ||||||||||||||| |    
T  25295011 gaggcatgcgcactggccaagtgttgtttccccagagaatcaaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagc 25294912  T
Q  304 aacttg 309  Q
    ||||||    
T  25294911 aacttg 25294906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 40944961 - 40944829
Alignment:
Q  176 ggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattgga 275  Q
    ||||||| ||||||| | ||| ||||| ||||||||| ||||| | ||  |||||| | |||  ||||||||| | |||||  ||||||||||| |||||    
T  40944961 ggtgagcgactaatccg-ctcatgcgtagaggcatgcatactggttaagtgttgttccccctgggaatcgaactcggtattctctggatacgtccttgga 40944863  T
Q  276 atgagcttcccgccactggagcccaaacaacttg 309  Q
    | |||||||  ||||| ||||||||| |||||||    
T  40944862 aggagcttcttgccaccggagcccaagcaacttg 40944829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 48342091 - 48341966
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    |||||||||  || ||||| |||||||||| |||   ||| ||||||| | |||| |||| |||||| ||||| ||  | |||||| |||||| |||||     
T  48342091 actaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaacccggtattccccaggtacgtccttggaaggagctc 48341992  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||||||||||||||||||||    
T  48341991 cttgccactggagcccaaacaacttg 48341966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 15795504 - 15795627
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||||||||||| |||||||| || ||||||    ||||||||| |||||||||| ||||| ||| ||||| ||| |||  ||||||||| | |||||     
T  15795504 ggttttcgacccaccattggtgggcgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttg-ttcccctgggaatcgaactcggtattc 15795602  T
Q  258 cctggatacgtcattggaatgagct 282  Q
    || || |||||| |||||| |||||    
T  15795603 cccgggtacgtccttggaaggagct 15795627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 311
Target Start/End: Complemental strand, 6462483 - 6462356
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| ||||  ||| |||||||   |||  ||||||||||| ||||| ||  |||||||| |||||| |||||     
T  6462483 actaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaacccggtattccccagatacgtccttggaaggagctc 6462384  T
Q  284 cccgccactggagcccaaacaacttgat 311  Q
    |  |||||| |||||||| |||||||||    
T  6462383 cttgccactagagcccaagcaacttgat 6462356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 10040617 - 10040503
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactg 293  Q
    ||||||||| |||||||||| ||||  ||| ||||||| | ||| ||||||||||||  |||| || || |||||| || ||| ||||| |  |||||||    
T  10040617 ctcgtgcgtagaggcatgcgcactggccaagcgttgttcc-cctgagaatcgaacccgatattccccgggtacgtccttagaaggagctccttgccactg 10040519  T
Q  294 gagcccaaacaacttg 309  Q
    |||||||| |||||||    
T  10040518 gagcccaagcaacttg 10040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 47749151 - 47749261
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactg 293  Q
    ||||||||| |||||||||| ||||  |||  |||||| | |||| ||||||||||| ||||| |||||||||||| ||||||  ||||     ||||||    
T  47749151 ctcgtgcgtagaggcatgcgcactggccaagagttgttcc-cctaggaatcgaacccggtattccctggatacgtccttggaagaagctcattaccactg 47749249  T
Q  294 gagcccaaacaa 305  Q
    ||||||||||||    
T  47749250 gagcccaaacaa 47749261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 49082839 - 49082772
Alignment:
Q  240 gaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaact 307  Q
    ||||||||| | ||||| || ||||||||| || ||| ||||| || |||||||||||||||||||||    
T  49082839 gaatcgaactcggtattccccggatacgtccttagaaggagctccctgccactggagcccaaacaact 49082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 309
Target Start/End: Complemental strand, 10855444 - 10855330
Alignment:
Q  195 tcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactgg 294  Q
    |||||||| |||||||||||||||  ||| ||||||| | |||   |||| ||||| ||||||||    ||| || |||||| ||||| |  ||||||||    
T  10855444 tcgtgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatccttggaaggagctccttgccactgg 10855345  T
Q  295 agcccaaacaacttg 309  Q
    |||||||||||||||    
T  10855344 agcccaaacaacttg 10855330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 309
Target Start/End: Original strand, 42412801 - 42412935
Alignment:
Q  175 tggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattgg 274  Q
    |||||||| ||||||| | ||| ||||| |||||||| | |||   ||| ||||||| | ||   ||||||||||| ||||| || ||||||||| ||||    
T  42412801 tggtgagcgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttgg 42412900  T
Q  275 aatgagcttcccgccactggagcccaaacaacttg 309  Q
    || ||||| |  |||| |||||||||| |||||||    
T  42412901 aaggagctccttgccattggagcccaagcaacttg 42412935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 928671 - 928546
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||||||| | |||||||| |||| ||||  |||||| | ||| ||||||||| |  ||||| ||| | |||||| ||||||||||||     
T  928671 actaatccggctcgtgcgtagcggcatgcgcactggtcaagtgttgttccccctgagaatcgaatctggtattccctaggtacgtccttggaatgagctc 928572  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||| | ||||| ||||||||||    
T  928571 cttgccagttgagcctaaacaacttg 928546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 3755641 - 3755516
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| ||| |||||| |||| |||||||||||| |||||  ||||||||  | ||||| || ||||||||| ||| || |||||     
T  3755641 actaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtccttgaaaagagctc 3755542  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
       |||||||||| |||| |||||||    
T  3755541 tttgccactggagtccaagcaacttg 3755516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 26361977 - 26362050
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtt 231  Q
    ||||| ||||||||||  |||| || ||||||| | ||||||||| |||||||||  ||||| |||||||||||    
T  26361977 ggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgtt 26362050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 30045917 - 30045820
Alignment:
Q  159 gttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatt 256  Q
    |||| ||||||||||  ||||  | ||||||| ||||||||||| ||| |||||| ||||  ||| ||||||| | |||| ||||||||||| |||||    
T  30045917 gtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaacccggtatt 30045820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 308
Target Start/End: Original strand, 3136730 - 3136853
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| ||||| ||||| |||||||||| ||||  |||  |||||| | ||| | ||||||| || ||||| || || |||||| ||| || ||||||    
T  3136730 actaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttcc-cctgaaaatcgaatccggtattccccgggtacgtccttgaaaggagctt 3136828  T
Q  284 cccgccactggagcccaaacaactt 308  Q
    |  ||||| ||||||||||||||||    
T  3136829 cttgccacgggagcccaaacaactt 3136853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 314
Target Start/End: Original strand, 51060331 - 51060447
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||||||||| ||||| |||  |||||| | ||| ||||||||||||  |||| || |||||  || |||||| |||||    ||||||||||     
T  51060331 tgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcgaacccgatattccccggatagatccttggaaggagctatttgccactggagt 51060430  T
Q  298 ccaaacaacttgattac 314  Q
    |||||||||||| ||||    
T  51060431 ccaaacaacttggttac 51060447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 7e-22; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 159 - 308
Target Start/End: Original strand, 5472858 - 5473007
Alignment:
Q  159 gttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttc 258  Q
    |||||||||||| ||  |||| || ||||||| | ||||||||| |||||||||| ||||  ||| ||||||||| ||| |||||| ||||  ||||| |    
T  5472858 gttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattcc 5472957  T
Q  259 ctggatacgtcattggaatgagcttcccgccactggagcccaaacaactt 308  Q
    | ||||||||| ||| |||||||| |  ||||||||||||||||||||||    
T  5472958 ccggatacgtccttgaaatgagctccttgccactggagcccaaacaactt 5473007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 24166526 - 24166401
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||||| ||||||||| |||||||||| ||||  ||||||||||||| | |  ||||||||||||||||| || |  |||||| |||||| |||||     
T  24166526 actaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacccagtattccccgagtacgtccttggaaggagctc 24166427  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||||||||||| |||||||    
T  24166426 cttgccactggagcccaatcaacttg 24166401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 309
Target Start/End: Complemental strand, 47078562 - 47078409
Alignment:
Q  156 ctggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtat 255  Q
    ||||||| ||||||| || |||||||| ||||||| | ||||||||| |||||||| | ||||  ||| ||||||| | |||  ||||||||||| ||||    
T  47078562 ctggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaacccggtat 47078463  T
Q  256 ttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    | || || |||||| |||||| ||||| |  ||||||||| ||||| |||||||    
T  47078462 tccccgggtacgtccttggaaggagctccttgccactggaacccaagcaacttg 47078409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 309
Target Start/End: Original strand, 48317282 - 48317435
Alignment:
Q  156 ctggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtat 255  Q
    ||||||| | ||||||||  |||| || ||||||| | ||||||||| ||||||| |  ||||| ||| ||||||| ||||| | ||||||| |||||||    
T  48317282 ctggtttccaacccatcaacggtgggcgactaatccggctcgtgcgtagaggcatacacactgaccaagcgttgttcctcctgaaaatcgaatccagtat 48317381  T
Q  256 ttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    ||   | ||||||||||||||||||||    ||||||||||||||| |||||||    
T  48317382 ttttcgaatacgtcattggaatgagctctttgccactggagcccaagcaacttg 48317435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 38166129 - 38165978
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||| ||  |||| || ||||||| | ||||||||| ||| |||||| ||||  ||| ||||||| | |||  ||||| |||||||||||     
T  38166129 ggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaacccagtattc 38166030  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || ||||||||| |||||| ||||| |  |||| ||||||||||||||||||    
T  38166029 cccggatacgtccttggaaggagctccttgccagtggagcccaaacaacttg 38165978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 53599122 - 53599011
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||||||||| ||||  ||||||||||| |||||  ||||||||||| ||||| || || |||||| |||||| ||||| |  |||| ||||||    
T  53599122 tgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccaatggagc 53599023  T
Q  298 ccaaacaacttg 309  Q
    ||||||||||||    
T  53599022 ccaaacaacttg 53599011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 29588813 - 29588687
Alignment:
Q  183 aactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagct 282  Q
    |||||||| | ||||||||| |||||||||| |||   ||| | ||||||| |||  ||||||||||| |||||||| ||  ||||| ||||||||||||    
T  29588813 aactaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaacccggtatttcccgggcacgtctttggaatgagct 29588714  T
Q  283 tcccgccactggagcccaaacaacttg 309  Q
     |  ||||||||||||||| |||||||    
T  29588713 ccttgccactggagcccaatcaacttg 29588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 43458689 - 43458564
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||| ||| |||||||||| ||||  ||| |||| || |||||  |||||||| |||||||| ||   ||||||| |||||||||||||    
T  43458689 actaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaatccagtattccccaaatacgtccttggaatgagctt 43458590  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||||||||||| |||||||    
T  43458589 cttgccactggagcccaagcaacttg 43458564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 26237432 - 26237527
Alignment:
Q  159 gttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagta 254  Q
    |||| |||||||||| |||||  | ||||||| ||||| |||||  || ||| || ||||||||||||||||||| ||| ||||||||||||||||    
T  26237432 gtttccgacccatcaatggtggactactaatccgactcatgcgtaaagacatacgcactgatcaaacgttgtttcccctgagaatcgaacccagta 26237527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 36145270 - 36145348
Alignment:
Q  204 gaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagct 282  Q
    |||||||||| ||||||||| ||||||||| |||  ||||||||||| ||||| || || |||||| ||||||||||||    
T  36145270 gaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaacccggtattccccgggtacgtccttggaatgagct 36145348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 1446902 - 1446777
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| ||||  |||  |||||| | |||  ||||||||||| ||||| || ||||||||| |||||| |||||     
T  1446902 actaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctc 1446803  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||||||||||| |||||||    
T  1446802 cttgccactggagcccaagcaacttg 1446777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 309
Target Start/End: Original strand, 1940786 - 1940934
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||||||||||| ||  |||| || ||||||| | ||||||||| |||||||||| ||    ||| ||||||| | |||  |||||||||||  |||||    
T  1940786 ggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacc---caagcgttgttccccctgggaatcgaacccgatattt 1940882  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || || |||||| |||||| ||||| |  |||||| ||||||||||||||||    
T  1940883 cccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttg 1940934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 29895863 - 29895738
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| ||||  |||  |||||| | |||  ||||||||||| ||||| || ||||||||| |||||| |||||     
T  29895863 actaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctc 29895764  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||||||||||| |||||||    
T  29895763 cttgccactggagcccaagcaacttg 29895738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 21429377 - 21429278
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    |||| |||||||||||||| |||||||||| ||||   |||||||||| | ||||| ||||||||||  |||| |  ||||||||| |||||| ||||||    
T  21429377 actagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacccgatattcctcggatacgtctttggaaggagctt 21429278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 38075495 - 38075384
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||||||||| ||||  ||| ||||||||| ||| |||||||||||| |||||  | | ||||||| |||||| || || |  ||| |||||||    
T  38075495 tgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaacccggtattctccgaatacgtccttggaaggaactccttgccgctggagc 38075396  T
Q  298 ccaaacaacttg 309  Q
    ||||||||||||    
T  38075395 ccaaacaacttg 38075384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 27248502 - 27248379
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||||| ||| ||||| ||||||||||  |||  ||| ||||||| |||||  || |||||||| ||||| || ||||||||| |||||| |||||     
T  27248502 actaatctggctcctgcgtagaggcatgcg--ctggccaagcgttgttcctcctgggactcgaacccggtattccccggatacgtccttggaaggagctc 27248405  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
       ||||||||||||||| |||||||    
T  27248404 gttgccactggagcccaagcaacttg 27248379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 3574473 - 3574606
Alignment:
Q  176 ggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattgga 275  Q
    ||||||| ||||||| ||||||||||| |||||||||| ||||  |||  ||||||   |||  |||| |||| | ||||| ||| | |||||| |||||    
T  3574473 ggtgagcgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttgga 3574572  T
Q  276 atgagcttcccgccactggagcccaaacaacttg 309  Q
    | ||||| |  ||||||||||||||| |||||||    
T  3574573 aggagctccttgccactggagcccaagcaacttg 3574606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 2559370 - 2559258
Alignment:
Q  197 gtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggag 296  Q
    |||||| |||||||||| ||||  ||| ||||||| ||||||  ||||||| || ||||| ||  | |||||| |||||| |||||    ||||||||||    
T  2559370 gtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaatccggtattccccaggtacgtccttggaaggagctcgttgccactggag 2559271  T
Q  297 cccaaacaacttg 309  Q
    |||||||||||||    
T  2559270 cccaaacaacttg 2559258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 306
Target Start/End: Complemental strand, 13552148 - 13552068
Alignment:
Q  226 gttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaac 306  Q
    |||||| ||||| ||||||||||||  |||| || ||||||||  |||||| ||||| |  ||||||||||||||||||||    
T  13552148 gttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 13552068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 20128385 - 20128293
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaa 276  Q
    ||||||||  |||||||||  ||||||||| ||||  ||| | ||||| | ||| |||||||||||||||||| || ||||||||| ||||||    
T  20128385 actaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcgaacccagtattccccggatacgtccttggaa 20128293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 42722586 - 42722710
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    |||||||||||||  |  ||||| | ||||||| | ||| ||||| |||||||||| ||||  ||| ||||||| |||||  |||| |||||| ||||||    
T  42722586 ggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaacccggtattt 42722685  T
Q  258 cctggatacgtcattggaatgagct 282  Q
    || || |||||| |||||| |||||    
T  42722686 cccgggtacgtccttggaaggagct 42722710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 55921136 - 55920985
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||| ||  ||||||| | ||||| | ||| | ||| |||||||||| ||||| |||  |||||| | |||  ||||||||||| |||||     
T  55921136 ggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattc 55921037  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || || | |||| |||||| ||||| |  ||||||||||||||| |||||||    
T  55921036 cccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttg 55920985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 276
Target Start/End: Original strand, 7246655 - 7246773
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||| ||  |||| || ||||||| | ||| ||||| |||||||||| ||||  ||| ||||||| |  ||| |||||||||||||||||     
T  7246655 ggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaacccagtattc 7246754  T
Q  258 cctggatacgtcattggaa 276  Q
    || || |||||| ||||||    
T  7246755 cccgggtacgtccttggaa 7246773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 49952181 - 49952279
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagct 282  Q
    ||||||| | ||| ||||| ||||| |||| ||||| |||||||||||||| || | |||| |||| | ||||||| | ||||||| |||||| |||||    
T  49952181 actaatccggctcatgcgtagaggcgtgcgcactgaccaaacgttgtttcttctgaaaatcaaacctaatatttcccgaatacgtccttggaaggagct 49952279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 8889098 - 8888973
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| ||| |||||| ||||  |||  |||||| | |||| ||||||||||| ||||| || ||||||||| || ||| |||||     
T  8889098 actaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggtattccccggatacgtccttagaaggagctc 8888999  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||| || ||||||||||||||||    
T  8888998 cttgccgctagagcccaaacaacttg 8888973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 27531748 - 27531817
Alignment:
Q  240 gaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    ||||||||||| ||||| ||||| |||||| |||||| ||||| |  |||||||||| |||| |||||||    
T  27531748 gaatcgaacccggtattccctgggtacgtccttggaaggagctccttgccactggagtccaagcaacttg 27531817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 6032736 - 6032804
Alignment:
Q  245 gaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttgatta 313  Q
    |||||| ||||| || || |||||| |||||| ||||| |  ||||||||||||||| |||||||||||    
T  6032736 gaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttgatta 6032804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 41162974 - 41163042
Alignment:
Q  241 aatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    |||||||| | |||||||| ||||||||| |||||| ||||| |  | ||||||||||||| |||||||    
T  41162974 aatcgaactcggtatttcccggatacgtccttggaaggagctccttgtcactggagcccaagcaacttg 41163042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 309
Target Start/End: Original strand, 14666080 - 14666231
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||||||||||| ||   ||| || ||||||||| || |||||| |||||||||| ||||  |||  |||||||| |||  ||||||||||| |||||     
T  14666080 ggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattc 14666179  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || ||||||||| |||||||||||| |  ||||||||||||||| |||||||    
T  14666180 cccggatacgtccttggaatgagctccttgccactggagcccaagcaacttg 14666231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 316
Target Start/End: Complemental strand, 13085597 - 13085467
Alignment:
Q  186 taatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcc 285  Q
    ||||||| ||||||||| |||| ||||  ||||   |||||||||| |  || |||||||||||| ||||| || ||||||||| |||||| ||||| |     
T  13085597 taatctggctcgtgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaacccggtattccccggatacgtccttggaaggagctcct 13085498  T
Q  286 cgccactggagcccaaacaacttgattaccc 316  Q
    |||||||||||||||||||| ||| ||||||    
T  13085497 cgccactggagcccaaacaagttggttaccc 13085467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 45521269 - 45521119
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||||||  ||||||| ||||||| | ||| ||||| |||||||||| |||||||||  |||||| | |||  ||||||||||| |||||     
T  45521269 ggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttcc-cctgggaatcgaacccggtattc 45521171  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || || ||| || ||||||||| || |  ||||||||||||||| |||||||    
T  45521170 cccgggtacatccttggaatgaactccttgccactggagcccaagcaacttg 45521119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 14846646 - 14846526
Alignment:
Q  188 atctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccg 287  Q
    ||||||||| ||||| |||||||||| ||||| ||| | ||||| | ||| |||||||||||| ||||| || || |||||| || ||| |||||||  |    
T  14846646 atctgactcatgcgtagaggcatgcgcactgaccaatcattgttcc-cctgagaatcgaacccggtattccccgggtacgtccttagaaggagcttcttg 14846548  T
Q  288 ccactggagcccaaacaacttg 309  Q
    ||| ||||||||||||||||||    
T  14846547 ccagtggagcccaaacaacttg 14846526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 314
Target Start/End: Complemental strand, 6100573 - 6100417
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    |||||||||||||  |  ||||| | ||||||| | ||| ||||| | |||||||| ||||  ||| ||||||| |||||  ||||||||||| |||||     
T  6100573 ggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattc 6100474  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttgattac 314  Q
    || ||||||||| ||| || ||||| |  ||||||| ||||||||||||||| ||||    
T  6100473 cccggatacgtccttgaaaggagctccttgccactgaagcccaaacaacttggttac 6100417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 18374085 - 18373961
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| |||| |||| |||||||   ||| |||||||||||  |||||||| |||||  || ||||||||||||     
T  18374085 actaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaacctggtatttcccggatatatctttggaatgagctc 18373986  T
Q  284 cccgccactggagcccaaacaactt 308  Q
    |  |||| |||||||||||||||||    
T  18373985 cttgccattggagcccaaacaactt 18373961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 314
Target Start/End: Original strand, 44893287 - 44893443
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||||||  ||||||| | ||||| | ||||||||| |||||||||  ||||  ||| | ||||| | ||||  ||| |||||| |||||     
T  44893287 ggtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaacccggtattc 44893386  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttgattac 314  Q
    || || |||||| |||||| ||||| |  ||||||||||||||||||||||| ||||    
T  44893387 cccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttggttac 44893443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 17981519 - 17981392
Alignment:
Q  181 gcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgag 280  Q
    |||||||||  ||||||||||| |||||||||  |||| ||||  |||||| | |||  ||||||||||| |||||||| || ||| || |||||| |||    
T  17981519 gcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaacccggtatttcccgggtacatccttggaaggag 17981420  T
Q  281 cttcccgccactggagcccaaacaactt 308  Q
    || |  ||||||||||||||| ||||||    
T  17981419 ctccttgccactggagcccaagcaactt 17981392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 282
Target Start/End: Complemental strand, 20240641 - 20240547
Alignment:
Q  188 atctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagct 282  Q
    ||||||||||||||| |||||||||| ||||| |||||||| ||| ||||   |||||||| |  |||| ||| |||||||| ||||||||||||    
T  20240641 atctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattccctagatacgtccttggaatgagct 20240547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 282
Target Start/End: Original strand, 20252426 - 20252520
Alignment:
Q  188 atctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagct 282  Q
    ||||||||||||||| |||||||||| ||||| |||||||| ||| ||||   |||||||| |  |||| ||| |||||||| ||||||||||||    
T  20252426 atctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattccctagatacgtccttggaatgagct 20252520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 3418548 - 3418673
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||||||||| ||||| || ||||||| ||||  |||  |||||| ||||||| ||||||||||  |||| ||  |||||||| |||||| |||||     
T  3418548 actaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaacccgatattccccagatacgtccttggaaggagctc 3418647  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||| |||| ||||||||||||    
T  3418648 cttgccacgggagtccaaacaacttg 3418673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 309
Target Start/End: Original strand, 1013026 - 1013137
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||||||| ||||||  ||| ||||||| | |||  ||||||||||| ||||| || ||||||||| ||||||  |||| |  |||||||||||    
T  1013026 tgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaaaagctccttgccactggagc 1013125  T
Q  298 ccaaacaacttg 309  Q
    |||| |||||||    
T  1013126 ccaagcaacttg 1013137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 8141163 - 8141052
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||||||||| ||||  ||| ||||||||| |||   |||||||||| ||||| || | ||||||| ||||||  |||| |  |||||||||||    
T  8141163 tgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattccccgaatacgtccttggaagcagctccttgccactggagc 8141064  T
Q  298 ccaaacaacttg 309  Q
    ||||||||||||    
T  8141063 ccaaacaacttg 8141052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 309
Target Start/End: Complemental strand, 34846886 - 34846764
Alignment:
Q  186 taatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcc 285  Q
    ||||||| || |||||| ||||||||| |||||  ||| |||||||   | |  ||||||||||| ||||| || || |||||| |||||||||||| |     
T  34846886 taatctggcttgtgcgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggtattcccggg-tacgtccttggaatgagctcct 34846788  T
Q  286 cgccactggagcccaaacaacttg 309  Q
     |||||||||||||||||||||||    
T  34846787 tgccactggagcccaaacaacttg 34846764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 583887 - 583764
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| ||||| ||||| |||||||||| |||| |||| ||||||| |  ||| ||||||||||| |||||||  |  |||||| ||||||  ||||     
T  583887 actaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttcc--ctaggaatcgaacccggtatttctcgagtacgtccttggaagtagctc 583790  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||| ||||||||||||||||    
T  583789 cttgccactagagcccaaacaacttg 583764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 43027380 - 43027250
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| | ||  ||| ||||||| |||||  ||||||||||||||||| ||   ||||||  ||| ||||||||     
T  43027380 actaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaacccagtattccccaaatacgttcttgaaatgagctc 43027281  T
Q  284 cccgccactggagcccaaacaacttgattac 314  Q
       ||||||||||||||||||||||| ||||    
T  43027280 attgccactggagcccaaacaacttggttac 43027250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 10927681 - 10927556
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| ||||  ||| ||||||| |||||| ||||||||||| ||||| || || |||||| ||| ||  ||||     
T  10927681 actaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccgggtacgtccttgaaagaagctc 10927582  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||| ||||||| |||||||    
T  10927581 cttgccactgaagcccaagcaacttg 10927556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 2467210 - 2467278
Alignment:
Q  241 aatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    |||||||||| ||||| || ||||||||| |||||| ||||| |  ||||||||||||||| |||||||    
T  2467210 aatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 2467278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 308
Target Start/End: Original strand, 33401834 - 33401958
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| ||||| ||||| |||||||||  |||| ||||  |||||| | ||| | |||||||||| ||||| || |  |||||| ||| || |||||     
T  33401834 actaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattccccgagtacgtccttgaaaggagctc 33401933  T
Q  284 cccgccactggagcccaaacaactt 308  Q
    |  ||||||||||||||||||||||    
T  33401934 cttgccactggagcccaaacaactt 33401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 38922459 - 38922574
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactg 293  Q
    |||||||||  ||||||||| ||||  ||| ||||||| |  ||  ||||||||||| ||||| || || |||||| |||||| ||||| |  |||||||    
T  38922459 ctcgtgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactg 38922558  T
Q  294 gagcccaaacaacttg 309  Q
    |||||||| |||||||    
T  38922559 gagcccaagcaacttg 38922574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 312
Target Start/End: Original strand, 68107 - 68261
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||||||  ||||| | | ||||| | |||||| ||  |||||||| |||||  ||||||||||| ||||| ||||||||||||  | ||     
T  68107 ggtttccgacccatcaaaggtgaacgattaatccggctcgtgtgtaaaggcatgcatactggccaaacgttgttcctcctgagaatcgaacccgatcttc 68206  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttgatt 312  Q
    || |   ||||| |||||| ||||| |  ||||| ||||| ||||||||||||||    
T  68207 cccgagcacgtccttggaaggagctccttgccaccggagctcaaacaacttgatt 68261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 256
Target Start/End: Complemental strand, 28319345 - 28319315
Alignment:
Q  226 gttgtttctcctaagaatcgaacccagtatt 256  Q
    |||||||||||||||||||||||||||||||    
T  28319345 gttgtttctcctaagaatcgaacccagtatt 28319315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 309
Target Start/End: Complemental strand, 13359089 - 13358972
Alignment:
Q  192 gactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccac 291  Q
    ||||||||||| |||| ||||| ||||  ||| ||||||| || || |||||||||||| |||||| | ||| || || |||||| ||||| |   ||||    
T  13359089 gactcgtgcgtagaggtatgcgcactgtccaagcgttgttccttctgagaatcgaacccggtattttccggacacatctttggaaggagctccttaccac 13358990  T
Q  292 tggagcccaaacaacttg 309  Q
    || ||||||| |||||||    
T  13358989 tgaagcccaagcaacttg 13358972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 34613833 - 34613934
Alignment:
Q  204 gaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaac 303  Q
    |||||||||||||||  || |||||||| |||||  |||||||||||  |||| || |||||||   |||||| |||||    |||||||||||||||||    
T  34613833 gaggcatgcgtactggccagacgttgttcctcctgggaatcgaacccgatattccccggatacggttttggaaggagctcattgccactggagcccaaac 34613932  T
Q  304 aa 305  Q
    ||    
T  34613933 aa 34613934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 6940576 - 6940508
Alignment:
Q  241 aatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    ||||||||||  ||||| | |||||| || |||||||||||| |   ||||||||||||||||||||||    
T  6940576 aatcgaacccgatattttccggatacctccttggaatgagctccttaccactggagcccaaacaacttg 6940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 159 - 309
Target Start/End: Complemental strand, 16802222 - 16802072
Alignment:
Q  159 gttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttc 258  Q
    |||||||||||| || |||||||| ||||||| | ||||||||| ||||||| || ||||  ||| ||||||| ||||||||||||||| || ||||| |    
T  16802222 gttttcgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgttcctcctaagaatcgaatccggtattcc 16802123  T
Q  259 ctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    | || |||||| |||||| |||||    ||||||||||||||  |||||||    
T  16802122 ccgggtacgtccttggaaggagctcattgccactggagcccaggcaacttg 16802072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 21190789 - 21190913
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||||||||||| ||||| || || ||||||||||||||||||| |||||||||| |||   ||| ||||| | |||||| ||||||||||| |||||     
T  21190789 ggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaacccggtattc 21190888  T
Q  258 cctggatacgtcattggaatgagct 282  Q
    || ||||| ||| |||||| |||||    
T  21190889 cccggataagtccttggaaggagct 21190913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 34659326 - 34659175
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    |||||||||| || || ||||| || ||||||| | ||||||||| |||||||||| |||| |||| ||||||| | | | |||||||||||| |||||     
T  34659326 ggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaacccggtattc 34659227  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || || ||| ||  ||||| ||||| |  |||||||||||||||||||||||    
T  34659226 cccgggtacatccctggaaggagctccttgccactggagcccaaacaacttg 34659175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 26423322 - 26423447
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||||| ||||||||| |||||| | | ||||  ||| ||||||||| |||  ||||||||||| ||||| | ||| |||||| |||||| ||| ||    
T  26423322 actaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaacccggtattccttgggtacgtccttggaaggagttt 26423421  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||||||||||||||||||||    
T  26423422 cttgccactggagcccaaacaacttg 26423447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 194 - 313
Target Start/End: Complemental strand, 1797524 - 1797405
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactg 293  Q
    ||||||||| ||| |||||| ||||  ||| ||||||||| |||  ||||||||||| ||||| |  ||||||||| |||||| ||||| |  |||||||    
T  1797524 ctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgccactg 1797425  T
Q  294 gagcccaaacaacttgatta 313  Q
    |||||||| |||||||||||    
T  1797424 gagcccaagcaacttgatta 1797405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 194 - 306
Target Start/End: Original strand, 4706029 - 4706141
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactg 293  Q
    ||||||||| || ||||||||| ||   |||||||||| | ||||| |||||||||  ||||||||| ||||||||||||||| ||||| |  ||||| |    
T  4706029 ctcgtgcgtagaagcatgcgtaatggctaaacgttgttccccctaaaaatcgaaccatgtatttcctagatacgtcattggaaggagctccttgccaccg 4706128  T
Q  294 gagcccaaacaac 306  Q
    ||| |||||||||    
T  4706129 gagtccaaacaac 4706141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 282
Target Start/End: Complemental strand, 44336963 - 44336869
Alignment:
Q  188 atctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagct 282  Q
    ||||||||||||||| |||||||||| ||||| |||||||| ||| ||||   |||||||| |  |||| ||| |||||||| ||||||||||||    
T  44336963 atctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattccctagatacgtccttggaatgagct 44336869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 43862007 - 43862132
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| ||||  ||||||||||| | |||  ||||||||||| ||||| ||  |||||||| |||||| |||||     
T  43862007 actaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccggtattccccagatacgtctttggaaagagctc 43862106  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||| || ||||||||||||||||    
T  43862107 cttgccgctagagcccaaacaacttg 43862132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 365240 - 365116
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||||||||||| || ||||| |  ||||||| | ||| ||||| |||||||||| |||||| || ||||||| |||||  ||||||||||| |||||     
T  365240 ggttttcgacccaccactggtgggtcactaatcaggctcatgcgtagaggcatgcgcactgattaagcgttgttcctcctgtgaatcgaacccggtattc 365141  T
Q  258 cctggatacgtcattggaatgagct 282  Q
    |  ||||||||  |||||| |||||    
T  365140 ctcggatacgtttttggaaggagct 365116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 309
Target Start/End: Original strand, 5039427 - 5039578
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||||||| ||| ||  ||||||| ||||||| | ||| ||||| |||| ||| | ||||| |||  |||||| |||||| ||||||||| | |||||     
T  5039427 ggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcggtattc 5039526  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || | |||| ||  ||||| ||||| |  |||||||||||||||||||||||    
T  5039527 cccgaatacatctatggaaggagctccttgccactggagcccaaacaacttg 5039578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 18785729 - 18785618
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||||||||| ||||  |||  |||||| | |||| ||||||||||| ||||| || || |||||| |||||| |||||||  |||||||||||    
T  18785729 tgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccgggtacgtccttggaaggagcttcttgccactggagc 18785630  T
Q  298 ccaaacaacttg 309  Q
    |||  |||||||    
T  18785629 ccatgcaacttg 18785618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 43925572 - 43925461
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||||||||| ||||| |||  |||||| | |||  ||||||||||| ||||| || || |||||| |||||| ||||| |  |||||||||||    
T  43925572 tgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagc 43925473  T
Q  298 ccaaacaacttg 309  Q
    |||| |||||||    
T  43925472 ccaagcaacttg 43925461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 47341940 - 47341825
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactg 293  Q
    ||||||||| |||||||||| ||||  |||  |||||| | |||  ||||||||| | ||||| || || |||||| |||||||||||| |  |||||||    
T  47341940 ctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagctccttgccactg 47341841  T
Q  294 gagcccaaacaacttg 309  Q
    |||||||| |||||||    
T  47341840 gagcccaagcaacttg 47341825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 48804783 - 48804632
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||| || |||||  | ||||||| | ||| ||||| |||||||||| ||||  |||  |||||| | | |  ||||||||||| |||||     
T  48804783 ggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaacccggtattc 48804684  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || ||||||||| |||||| ||||| |  ||||||||||||||| |||||||    
T  48804683 cccggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 48804632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 17748417 - 17748542
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||| ||| |||||||||| ||||  ||| ||||||| | |||  ||||||||||| ||||| || | ||||||| ||||||  ||||     
T  17748417 actaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgaatacgtccttggaagaagctg 17748516  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||| ||||||||||||||||    
T  17748517 cttgccactagagcccaaacaacttg 17748542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 22974041 - 22973916
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||||| ||| ||||| || ||||||  ||||  ||| ||||||| | ||| |||||||||||| ||||| || |  |||||| |||||| |||||     
T  22974041 actaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaacccggtattccccgagtacgtccttggaaggagctc 22973942  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    | ||||| | ||||||||||||||||    
T  22973941 ctcgccattagagcccaaacaacttg 22973916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 309
Target Start/End: Original strand, 22993394 - 22993527
Alignment:
Q  176 ggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattgga 275  Q
    ||||||| ||||||| |  |||||||| |||||||||  ||||  ||| ||||||| |||||  |||||||||||  |||| || || |||||| |||||    
T  22993394 ggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccgatattccccgggtacgtccttgga 22993493  T
Q  276 atgagcttcccgccactggagcccaaacaacttg 309  Q
    | ||||| |  |||||||||| |||| |||||||    
T  22993494 aggagctccttgccactggagtccaagcaacttg 22993527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 306
Target Start/End: Complemental strand, 9685771 - 9685691
Alignment:
Q  226 gttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaac 306  Q
    |||||| ||||| ||||||||||||  |||| || ||||||||  |||||| ||||| |  ||||||||||||||||||||    
T  9685771 gttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 9685691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 49142680 - 49142776
Alignment:
Q  160 ttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatt 256  Q
    ||||||||||||||  |||| |||||||||| | ||||||||| |||||||| | ||||   || ||||||| | |||| ||||||||||| |||||    
T  49142680 ttttcgacccatcaaaggtgggcaactaatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcgaacccggtatt 49142776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 5069907 - 5069978
Alignment:
Q  241 aatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttgatt 312  Q
    |||||||||| |||||||| || |||||| || |||  |||| |  ||||||||||||||||||||||||||    
T  5069907 aatcgaacccggtatttcccgggtacgtccttagaagaagctccttgccactggagcccaaacaacttgatt 5069978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 19914793 - 19914862
Alignment:
Q  240 gaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    ||||||||||||||||| | | | |||||| |||||| ||||| |  ||||||||||||||| |||||||    
T  19914793 gaatcgaacccagtattccttaggtacgtccttggaaggagctccttgccactggagcccaagcaacttg 19914862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 22268144 - 22268189
Alignment:
Q  264 tacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    |||||| |||||||||||| |  |||||||||||||||||||||||    
T  22268144 tacgtccttggaatgagctccttgccactggagcccaaacaacttg 22268189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 309
Target Start/End: Original strand, 43346786 - 43346939
Alignment:
Q  156 ctggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtat 255  Q
    ||||||| ||||||| ||  | ||||| ||||||| | ||||| ||| |||||||||| || |  |||  |||||| | | | ||||| |||||| ||||    
T  43346786 ctggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaacccggtat 43346885  T
Q  256 ttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    | ||  |||||||| |||||| ||||| |  |||||||||| ||||||||||||    
T  43346886 tccccagatacgtctttggaaggagctccttgccactggagtccaaacaacttg 43346939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 309
Target Start/End: Original strand, 4195238 - 4195362
Alignment:
Q  185 ctaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttc 284  Q
    |||||| | ||| ||||| |||||||||| |||   |||| |||||| |||||   |||||||| | ||||| || ||||||||| |||| | ||||| |    
T  4195238 ctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaactcggtattccccggatacgtccttggcaggagctcc 4195337  T
Q  285 ccgccactggagcccaaacaacttg 309  Q
      ||||||||||||||| |||||||    
T  4195338 ttgccactggagcccaagcaacttg 4195362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 37514985 - 37514897
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagct 282  Q
    ||||||||| ||| |||||| ||||| ||||||||||| |  || | |||||||||||||||| || || || ||| |||||| |||||    
T  37514985 ctcgtgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcgaacccagtattccccgggtatgtccttggaaggagct 37514897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 42032114 - 42032046
Alignment:
Q  240 gaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaactt 308  Q
    ||||||||||  ||||| || || |||||| |||||| |||||||  || |||||||||||||||||||    
T  42032114 gaatcgaaccaggtattccccgggtacgtccttggaaggagcttcttgctactggagcccaaacaactt 42032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 308
Target Start/End: Complemental strand, 11142680 - 11142554
Alignment:
Q  182 caactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagc 281  Q
    ||||||||||||||| ||||| |||||||||| |||| ||||||||||||||  ||  ||||||||| | |||||||| || || ||| |||||||||||    
T  11142680 caactaatctgactcatgcgtagaggcatgcgcactggtcaaacgttgtttccactgcgaatcgaactcggtatttcccgggtatgtccttggaatgagc 11142581  T
Q  282 ttcccgccactggagcccaaacaactt 308  Q
    |||  | |||||  |||||||||||||    
T  11142580 ttcttgtcactgaggcccaaacaactt 11142554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 21898723 - 21898593
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| ||||  ||| ||||||| |||||  ||||||||||| ||||| || ||||||||| |||||| |||||     
T  21898723 actaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttggaaggagctc 21898624  T
Q  284 cccgccactggagcccaaacaacttgattac 314  Q
    |  ||||||||||||||| ||||||| ||||    
T  21898623 cttgccactggagcccaagcaacttggttac 21898593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 14107393 - 14107518
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||| | |||| |||| ||||||| |||||  ||||||||||| ||||| || | ||||||| |||||| |||||     
T  14107393 actaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtctttggaaggagctc 14107492  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||||||||||||||||||||    
T  14107493 cttgccactggagcccaaacaacttg 14107518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 198 - 309
Target Start/End: Original strand, 9179785 - 9179896
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||| |||| ||||| ||||  |||||| | |||  ||||||||||| ||||| ||||| |||||| |||||||||||| |  |||||||||||    
T  9179785 tgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaacccggtattccctgggtacgtccttggaatgagctccttgccactggagc 9179884  T
Q  298 ccaaacaacttg 309  Q
    ||||||||||||    
T  9179885 ccaaacaacttg 9179896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 306
Target Start/End: Original strand, 10311479 - 10311626
Alignment:
Q  159 gttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttc 258  Q
    |||||||||||| || |||||||| |||||||| |||||||||| ||| |||||| ||||  ||| ||||||| | | | || ||||||||| ||||| |    
T  10311479 gttttcgacccaccaatggtgagcgactaatctaactcgtgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattcc 10311578  T
Q  259 ctggatacgtcattggaatgagcttcccgccactggagcccaaacaac 306  Q
    | ||||||||  |||||| ||||| |  || |||||||||||| ||||    
T  10311579 ccggatacgttcttggaaggagctccttgctactggagcccaagcaac 10311626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 309
Target Start/End: Original strand, 8612023 - 8612134
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| || ||||||  |||| |||| ||||||| |||||  ||||||||||| ||||| || || |||||| |||||| ||||| |  ||||||||||     
T  8612023 tgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagt 8612122  T
Q  298 ccaaacaacttg 309  Q
    ||||||||||||    
T  8612123 ccaaacaacttg 8612134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 13036039 - 13036164
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||||| ||| ||||| |||||||||| ||||  |||  |||||| | ||| | ||||||||||  |||| || | ||||||| |||||| |||||     
T  13036039 actaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccgatattccccgaatacgtccttggaaggagctc 13036138  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||||||||||| |||||||    
T  13036139 cttgccactggagcccaagcaacttg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 33859355 - 33859431
Alignment:
Q  185 ctaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctg 261  Q
    |||||| ||||  ||||| |||||||||| ||||  ||||||||||| | ||||| |||||||||| ||||||||||    
T  33859355 ctaatccgactaatgcgtagaggcatgcgcactgggcaaacgttgttccccctaaaaatcgaacccggtatttcctg 33859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 8938744 - 8938661
Alignment:
Q  226 gttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    |||||| |||||  |||||||||| |||||| || ||||| ||| |||||| ||||| |  | |||||||||||||||||||||    
T  8938744 gttgttcctcctgggaatcgaaccaagtattccccggatatgtctttggaaggagctccttgtcactggagcccaaacaacttg 8938661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 309
Target Start/End: Original strand, 29333188 - 29333298
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||||||||| ||||  ||||||||||| | |||   |||||||||| ||||| ||||| |||||| |||||| |||||    |||||| ||||    
T  29333188 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctggaaatcgaacccggtattccctgggtacgtccttggaaggagctcattgccactagagc 29333286  T
Q  298 ccaaacaacttg 309  Q
    ||||||||||||    
T  29333287 ccaaacaacttg 29333298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 2271391 - 2271461
Alignment:
Q  239 agaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    |||||||||||| ||||| || | ||||||| |||||| ||||| |  ||||||||||||||| |||||||    
T  2271391 agaatcgaacccggtattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttg 2271461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 3030732 - 3030778
Alignment:
Q  263 atacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    ||||||| |||||||||||| |  |||||||||||||||||||||||    
T  3030732 atacgtccttggaatgagctccttgccactggagcccaaacaacttg 3030778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 8888984 - 8888872
Alignment:
Q  157 tggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatt 256  Q
    |||||||||| ||||||  ||||  | ||||||| ||||| ||||| |||| ||||| ||||  ||||||||||||| | ||| |||||||  |  ||||    
T  8888984 tggttttcgatccatcaaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgttgtttcccttaaaaatcgaattcgatatt 8888885  T
Q  257 tcctggatacgtc 269  Q
     ||||||||||||    
T  8888884 ccctggatacgtc 8888872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 312
Target Start/End: Complemental strand, 9147320 - 9147248
Alignment:
Q  240 gaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttgatt 312  Q
    |||||||||||  |||| ||  | |||||| |||||||||||| |   |||||||||||||||||||||||||    
T  9147320 gaatcgaacccgatattccccaggtacgtccttggaatgagctccttcccactggagcccaaacaacttgatt 9147248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 34954627 - 34954774
Alignment:
Q  157 tggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatt 256  Q
    |||||| ||||||||||  ||||  | ||||||||| ||| ||||| |||| ||| | ||||  ||||||||||| | ||| |||||||||||  |||||    
T  34954627 tggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaacctggtatt 34954726  T
Q  257 tcctggatacgtcattggaatgagcttcccgccactggagcccaaacaa 305  Q
     ||  | |||||| |||||| ||||| |  |||| ||||||||||||||    
T  34954727 ccccaggtacgtccttggaaggagctccttgcca-tggagcccaaacaa 34954774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 309
Target Start/End: Original strand, 4016262 - 4016415
Alignment:
Q  156 ctggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtat 255  Q
    ||||||| ||||||| || |||||||||||||||| | |||||| || |||||||||| ||||  |||  |||||| | ||| | ||||||||||  |||    
T  4016262 ctggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaacccgatat 4016361  T
Q  256 ttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    |||   | |||||| ||||||||||||||  |||||||||||||| ||||||||    
T  4016362 ttctcaggtacgtccttggaatgagcttcttgccactggagcccatacaacttg 4016415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 23247386 - 23247511
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||||| ||||||||| ||||||||| |||||||||| ||||||| |||||  |||||||||||  |||| ||  | |||||| ||||||||||||     
T  23247386 actaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaacccgatattccccaggtacgtccttggaatgagctc 23247485  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  || |||| || ||||||||||||    
T  23247486 cttgctactgaagtccaaacaacttg 23247511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 2485294 - 2485144
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||||||  ||||||| ||||||| ||||| | ||| |||||||||| || |  | |  |||||| | |||| |||||||||||||||||     
T  2485294 ggtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgcgcacaggcccagggttgttcc-cctaggaatcgaacccagtattc 2485196  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    |||| ||||||| |||||||||||| |  |||| ||||| ||||||||||||    
T  2485195 cctgaatacgtccttggaatgagctccttgccattggagtccaaacaacttg 2485144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 5731955 - 5732080
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||||| ||| | ||| |||||||||| ||||  ||| ||||||| |||||  ||||||||||| ||||| || || |||||| |||||| |||||     
T  5731955 actaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctc 5732054  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||||||||||| |||||||    
T  5732055 cttgccactggagcccaagcaacttg 5732080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 35813033 - 35813162
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| ||||| || || ||| |||||| |||| |||| | || |||| |||| ||||||||||| ||||| |  || |||||| |||||||||||||    
T  35813033 actaatccgactcatgtgtagagacatgcgcactggtcaagcattatttcccctaggaatcgaacccggtattcctcgggtacgtccttggaatgagctt 35813132  T
Q  284 cccgccactggagcccaaacaacttgatta 313  Q
    |  ||||| | |||||||||||||||||||    
T  35813133 cttgccaccgcagcccaaacaacttgatta 35813162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 18327785 - 18327714
Alignment:
Q  241 aatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttgatt 312  Q
    ||||||||||||||||||||| ||||||| |||||| ||||| |  |||||||||| ||||| |||||||||    
T  18327785 aatcgaacccagtatttcctgaatacgtccttggaaggagctccttgccactggagtccaaaaaacttgatt 18327714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 8513591 - 8513466
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||||| ||||||||| |||||||| | ||||  ||| | ||||||| |||| ||||||||||| ||||| || || |||||| |||||| |||||     
T  8513591 actaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaacccggtattccccgggtacgtccttggaaggagctc 8513492  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||| ||| |||| |||||||    
T  8513491 cttgccacttgagtccaagcaacttg 8513466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 309
Target Start/End: Complemental strand, 19572824 - 19572671
Alignment:
Q  156 ctggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtat 255  Q
    ||||||| | ||||| || |||||| | ||||||| | ||| ||||| |||||||||| ||||  |||  |||||| | |||  ||||| ||||| ||||    
T  19572824 ctggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaacccggtat 19572725  T
Q  256 ttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    | || ||||||||| |||||| ||||| |  ||||||||||||||| |||||||    
T  19572724 tccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 19572671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 12705072 - 12704961
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| || ||||||  |||| |||| ||||||| |||||  ||||||||||| ||||| || || |||||| |||||| ||||| |  ||||||||||     
T  12705072 tgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagt 12704973  T
Q  298 ccaaacaacttg 309  Q
    ||||||||||||    
T  12704972 ccaaacaacttg 12704961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 301
Target Start/End: Complemental strand, 16755091 - 16755016
Alignment:
Q  226 gttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaa 301  Q
    |||||||||||| | |||||||||||||||| || ||||||||| |||||| ||||| |  ||||||| |||||||    
T  16755091 gttgtttctcctgaaaatcgaacccagtattccccggatacgtctttggaaagagctccttgccactgaagcccaa 16755016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 309
Target Start/End: Complemental strand, 26077211 - 26077088
Alignment:
Q  186 taatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcc 285  Q
    ||||||| ||||||||| |||||||| | ||||  ||| ||||||| |  ||  |||||||||| |||||| ||   ||||||| |||||||||||| |     
T  26077211 taatctggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtccttggaatgagctcct 26077112  T
Q  286 cgccactggagcccaaacaacttg 309  Q
      ||||||||||||||||||||||    
T  26077111 taccactggagcccaaacaacttg 26077088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 35403558 - 35403668
Alignment:
Q  195 tcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactgg 294  Q
    |||||||| ||| |||||| | ||  ||| ||||||| | ||| |||||||||||| |||||||| |  |||||| |||||| ||||| |  ||||||||    
T  35403558 tcgtgcgtagagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtatttcccgagtacgtccttggaaggagctccttgccactgg 35403657  T
Q  295 agcccaaacaa 305  Q
    |||||||||||    
T  35403658 agcccaaacaa 35403668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 3653949 - 3654072
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||||||| |||||||||| |||| |||| ||||||| ||| || ||||||||||| |||||  | || |||||| |||||| |||||     
T  3653949 actaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgtt-ctc-taggaatcgaacccggtattctccgggtacgtccttggaaagagctc 3654046  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
       | |||||||||||||||||||||    
T  3654047 attgtcactggagcccaaacaacttg 3654072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 12766203 - 12766078
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    |||||||||  || ||||| |||||||||  ||||  ||| | ||||| ||||| |||||||||||| ||||| || || |||||| |||||| |||||     
T  12766203 actaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcgaacccggtattccccgggtacgtccttggaaggagctc 12766104  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||| ||| ||||||||||||    
T  12766103 cttgccactcgagtccaaacaacttg 12766078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 18136371 - 18136440
Alignment:
Q  240 gaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    ||||||||||| |||||  | ||||||||| |||||| ||||| |  |||||||||||||||||||||||    
T  18136371 gaatcgaacccggtattctccggatacgtctttggaaggagctccttgccactggagcccaaacaacttg 18136440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 42086399 - 42086274
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| |||| |||| ||||||| | |||  ||||||||||| ||||| |  || |||||| |||||| |||||     
T  42086399 actaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacccggtattcctcgggtacgtccttggaaggagctc 42086300  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||| ||||||||| |||||||    
T  42086299 cttgccaccggagcccaagcaacttg 42086274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 314
Target Start/End: Complemental strand, 1538489 - 1538373
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||||||||| ||||  |||  |||||| | |||  ||||||||||| ||||| || | ||||||| | |||| ||||| |  |||||||||||    
T  1538489 tgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgaatacgtcctcggaaggagctccttgccactggagc 1538390  T
Q  298 ccaaacaacttgattac 314  Q
    |||||||||||| ||||    
T  1538389 ccaaacaacttggttac 1538373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 9812903 - 9812819
Alignment:
Q  225 cgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    ||||||| |||||  ||||||||||| ||||| || || |||||| |||||| ||||| |  |||||||||| ||||||||||||    
T  9812903 cgttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttg 9812819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 14728181 - 14728109
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgt 230  Q
    ||||| ||||||||||  ||||||||||||||| | ||| ||||| |||||||||| ||||| ||| ||||||    
T  14728181 ggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgt 14728109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 7616992 - 7616945
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtt 231  Q
    ||||||||||||| ||||| ||||||||| ||||| ||||||||||||    
T  7616992 actaatctgactcatgcgtagaggcatgcatactggtcaaacgttgtt 7616945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 12081970 - 12081895
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtc 269  Q
    ||||||||| || ||||||| ||||  ||| ||||||| | ||| |||||||||||||||||| || |||||||||    
T  12081970 ctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaacccagtattccccggatacgtc 12081895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 313
Target Start/End: Complemental strand, 20693007 - 20692876
Alignment:
Q  182 caactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagc 281  Q
    |||||||||||| || |||   |||||||| ||||||  ||| |||||||||  ||| ||||| ||||| ||||| || || |||||| ||||||  |||    
T  20693007 caactaatctgaatcatgcacagaggcatgtgtactggccaagcgttgtttcctctaggaatcaaacccggtattccccgggtacgtccttggaagaagc 20692908  T
Q  282 ttcccgccactggagcccaaacaacttgatta 313  Q
    |    |||||| ||||||||||||||||||||    
T  20692907 tctttgccactagagcccaaacaacttgatta 20692876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 35638068 - 35638131
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaa 247  Q
    ||||||||||||||||||| |||| ||||  ||||| ||||||||||| ||||| | |||||||    
T  35638068 actaatctgactcgtgcgtagaggtatgcacactgaccaaacgttgttcctcctgaaaatcgaa 35638131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 6767137 - 6767211
Alignment:
Q  235 cctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    |||| ||||||||||| ||||| || || |||||| |||||| ||||| |  ||||||||||||||| |||||||    
T  6767137 cctatgaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttg 6767211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 309
Target Start/End: Complemental strand, 7866642 - 7866528
Alignment:
Q  195 tcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactgg 294  Q
    |||||||| |||||||||  ||||  ||| ||||||| |||||  ||||||||||| ||||| |  || |||||| |||||| ||||| |  ||||||||    
T  7866642 tcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccactgg 7866543  T
Q  295 agcccaaacaacttg 309  Q
    || |||| |||||||    
T  7866542 agtccaagcaacttg 7866528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 302
Target Start/End: Original strand, 25417218 - 25417336
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||| ||| |||||||||| ||||  ||| ||||||| | |||  ||||||||||| ||||| || |  |||||| |||||| |||||     
T  25417218 actaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggagctc 25417317  T
Q  284 cccgccactggagcccaaa 302  Q
    |  ||||||||||||||||    
T  25417318 cttgccactggagcccaaa 25417336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 19839399 - 19839346
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcct 237  Q
    |||||||||||||||  || |||||||||| ||||||||| ||||||| |||||    
T  19839399 actaatctgactcgtatgtagaggcatgcgcactgatcaagcgttgttcctcct 19839346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 22655192 - 22655257
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacc 249  Q
    ||||||||||||  ||||| |||||||||  ||||||||||| ||||||| |||  ||||||||||    
T  22655192 actaatctgacttatgcgtagaggcatgcacactgatcaaacattgtttcccctgggaatcgaacc 22655257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 30349631 - 30349526
Alignment:
Q  204 gaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaac 303  Q
    |||||||||| ||||  ||| | ||||| | ||||  |||| ||||| ||||| || ||||||||| |||||| || || |  |||||||||||||||||    
T  30349631 gaggcatgcgcactggccaatcattgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggaactccttgccactggagcccaaac 30349532  T
Q  304 aacttg 309  Q
    ||||||    
T  30349531 aacttg 30349526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 309
Target Start/End: Complemental strand, 39728467 - 39728334
Alignment:
Q  176 ggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattgga 275  Q
    ||||||| ||||||  |||||| |||| |||||||||  ||||  |||  ||||||||  || | |||||||||  ||||| || || |||||  |||||    
T  39728467 ggtgagcgactaattcgactcgagcgtagaggcatgcacactggccaagtgttgtttcctctgataatcgaacctggtattccccgggtacgttcttgga 39728368  T
Q  276 atgagcttcccgccactggagcccaaacaacttg 309  Q
    | ||||| |  |||||||||||||||||||||||    
T  39728367 aagagctccttgccactggagcccaaacaacttg 39728334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 41163550 - 41163619
Alignment:
Q  240 gaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    ||||||||||| ||||| || || |||||  |||||| ||||| |  |||||||||||||||||||||||    
T  41163550 gaatcgaacccggtattccccgggtacgttcttggaaggagctccttgccactggagcccaaacaacttg 41163619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 25467472 - 25467384
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagct 282  Q
    ||||||||| |||||||||||||||  ||| ||||||| ||||| | ||||||| | |||||| | || ||||||| || ||| |||||    
T  25467472 ctcgtgcgtagaggcatgcgtactggccaatcgttgttcctcctgaaaatcgaatctagtattccttgtatacgtccttagaaggagct 25467384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 5855594 - 5855469
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| ||||  ||| ||||||| |||||  ||||||||||| ||||| || | ||||||| |||||| |||||     
T  5855594 actaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtccttggaaggagctc 5855495  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||||||||||||||||||||    
T  5855494 cttgccactggagcccaaacaacttg 5855469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 17642040 - 17642165
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||||||| |||||||||| ||||  |||  |||||| | |||  ||||||||||||||||||||||| ||||||  ||||| |||||     
T  17642040 actaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccagtatttcctgggtacgtccgtggaaggagctc 17642139  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  | |||||||||||||||||||||    
T  17642140 cttgtcactggagcccaaacaacttg 17642165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 309
Target Start/End: Original strand, 12036782 - 12036905
Alignment:
Q  186 taatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcc 285  Q
    ||||||| ||||||||| |||||||||| ||||  ||| | ||||| | |||| ||||| |||||||||||  || | |||||| |||||| |||||||     
T  12036782 taatctggctcgtgcgtagaggcatgcgcactggccaagcattgttccccctaggaatcaaacccagtattctctaggtacgtccttggaaggagcttct 12036881  T
Q  286 cgccactggagcccaaacaacttg 309  Q
     ||||| |||||||||||||||||    
T  12036882 tgccaccggagcccaaacaacttg 12036905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 10422860 - 10422735
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| ||||  |||  |||||| ||||||  |||||||||| ||||| || | |||||||||||||| |||||     
T  10422860 actaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaacccggtattccccgaatacgtcattggaaggagctc 10422761  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||| |||||||||||||||    
T  10422760 cttgccactgtagcccaaacaacttg 10422735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 301
Target Start/End: Original strand, 9853315 - 9853430
Alignment:
Q  186 taatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcc 285  Q
    |||||||  ||||| || |||||||||| |||| | |||||||||||| |||| ||||||||||| |||||| | || ||| || |||||| ||||| |     
T  9853315 taatctggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaacccggtattttccgggtacatccttggaaggagctcct 9853414  T
Q  286 cgccactggagcccaa 301  Q
     |||||||||||||||    
T  9853415 tgccactggagcccaa 9853430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 309
Target Start/End: Original strand, 33004025 - 33004176
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||||||||||| |||||||| |  ||||||| | ||||||||| |||||||||| ||||  ||| | ||||||| |||   ||||||| ||  ||||     
T  33004025 ggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatattc 33004124  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || ||||||||| |||||| ||||| | |  ||||||||||||| |||||||    
T  33004125 cccggatacgtccttggaaggagctcctcatcactggagcccaagcaacttg 33004176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 309
Target Start/End: Original strand, 41663906 - 41664017
Alignment:
Q  198 tgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagc 297  Q
    ||||| |||||||||| ||||| |||  |||||| | |||  ||||||||||| ||||| || ||||||||| || ||| ||||| |  |||||||||||    
T  41663906 tgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagc 41664005  T
Q  298 ccaaacaacttg 309  Q
    ||||||||||||    
T  41664006 ccaaacaacttg 41664017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 49078212 - 49078061
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||| | || |||||| | ||||||| | ||| ||||| |||||||||| ||||  |||  |||||||| |||  ||||||||||| |||||     
T  49078212 ggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattc 49078113  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || ||||||||| || ||| ||||| |  ||||||||||||||| |||||||    
T  49078112 cccggatacgtccttagaaggagctccttgccactggagcccaagcaacttg 49078061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 309
Target Start/End: Original strand, 50503371 - 50503522
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||| |||||||| || || |||| | ||||||||| |||||||||| |||| ||||  |||||| | |||  |||||||||||  ||||     
T  50503371 ggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacccgatattc 50503470  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || ||||||||| ||| || ||||| | ||||||| ||| ||| ||||||||    
T  50503471 cccggatacgtccttgaaaggagctcctcgccactagagtccatacaacttg 50503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 16956566 - 16956440
Alignment:
Q  156 ctggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtat 255  Q
    ||||||| ||||||| ||  ||||||  ||||||| | ||||||||| |||||||||| |||| |||||||||||| | ||| |||| ||||| | ||||    
T  16956566 ctggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctgagaaccgaacacggtat 16956467  T
Q  256 ttcctggatacgtcattggaatgagct 282  Q
    | || || |||||| |||||| |||||    
T  16956466 tccccgggtacgtccttggaaggagct 16956440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 309
Target Start/End: Original strand, 31576626 - 31576708
Alignment:
Q  227 ttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    ||||||| ||| |||||||||||| |||||| | ||||||||| || ||||||||| |  |||||| ||||||||||||||||    
T  31576626 ttgtttcccctgagaatcgaacccggtattttcgggatacgtccttagaatgagctccttgccactagagcccaaacaacttg 31576708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 48798106 - 48798231
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| |||||||||| |||  |||| ||||||| | |||   ||||||||||  |||| || |||||||||||||||| |||||     
T  48798106 actaatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagctc 48798205  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||||||||| |||||||||    
T  48798206 cttgccactggagccccaacaacttg 48798231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 47312935 - 47313062
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||||| ||| ||||| ||||||| || ||||  ||||||||||| | |||| ||||| ||||| ||||| ||  |||||||| |||||| || ||     
T  47312935 actaatctggctcatgcgtagaggcatacgcactggccaaacgttgttcc-cctaggaatcaaacccggtattccccagatacgtccttggaaggatctc 47313033  T
Q  284 cccgccactggagcccaaacaacttgatt 312  Q
       ||||||||||||||||||||||||||    
T  47313034 gttgccactggagcccaaacaacttgatt 47313062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 2567347 - 2567220
Alignment:
Q  185 ctaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttc 284  Q
    ||||||||||||||| || |||||||||| ||||  ||| ||||||||  ||  | |||||||||| |||||  | | ||||||| |||||| ||||| |    
T  2567347 ctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatcgaacccggtattctccgaatacgtccttggaaggagctcc 2567248  T
Q  285 ccgccactggagcccaaacaacttgatt 312  Q
      |||| || ||||||||||||||||||    
T  2567247 ttgccagtgaagcccaaacaacttgatt 2567220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 309
Target Start/End: Complemental strand, 18915957 - 18915814
Alignment:
Q  166 acccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggata 265  Q
    ||||| || |||||||| ||||||| | ||||||||| |||||||||  ||||  |||  |||||| | |||  ||||||||||| ||||| || || ||    
T  18915957 acccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattccccgggta 18915858  T
Q  266 cgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    |||| ||||||  |||| |  ||||||| |||||||||||||||    
T  18915857 cgtccttggaagaagctccttgccactgaagcccaaacaacttg 18915814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 34719873 - 34719750
Alignment:
Q  159 gttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttc 258  Q
    |||| ||||||| ||  ||||||| ||||||||||||||||||| |||||||||| |||| |||| |||| || |   |  ||||||||||||||||| |    
T  34719873 gtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgttattcccagtgggaatcgaacccagtattcc 34719774  T
Q  259 ctggatacgtcattggaatgagct 282  Q
    |  | |||||| |||||| |||||    
T  34719773 ccaggtacgtccttggaaggagct 34719750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 2980967 - 2981092
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| ||||||||||| |||||||||  ||||  |||  |||||| |  ||  ||||||||||||||||| || |||||||||  ||||| |||||     
T  2980967 actaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaacccagtattccccggatacgtccctggaaggagctc 2981066  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||| |||||||| |||||||    
T  2981067 cttgccactagagcccaagcaacttg 2981092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 33418151 - 33418276
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||||| | |||||||||| ||||  ||| ||||||  | |||| |||||||| || |||||  | || |||||| |||||| |||||     
T  33418151 actaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattctccgggtacgtctttggaaggagctc 33418250  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||||||||||||||||||||    
T  33418251 cttgccactggagcccaaacaacttg 33418276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 250
Target Start/End: Original strand, 38859126 - 38859218
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaaccc 250  Q
    ||||||||||||||||  |||| || | ||||||||||||||||| |||||||| | | ||| ||||| ||||| | |||  |||||||||||    
T  38859126 ggttttcgacccatcaaaggtgggcgattaatctgactcgtgcgtagaggcatgtgcattgaccaaacattgttacccctgggaatcgaaccc 38859218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 308
Target Start/End: Original strand, 43959857 - 43959981
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||||||| |||||||||| ||||  ||| ||||||| | |||  |||| ||||||  |||| || || ||||||||||||| ||||      
T  43959857 actaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaacccgatattccccgggtacgtcattggaaggagcac 43959956  T
Q  284 cccgccactggagcccaaacaactt 308  Q
    |  ||||||||||||||| ||||||    
T  43959957 cttgccactggagcccaatcaactt 43959981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 302
Target Start/End: Original strand, 45361940 - 45362036
Alignment:
Q  206 ggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaa 302  Q
    |||||||| ||||  ||| ||||||| ||||| |||||||||||| ||||| || || |||||| |||||| ||||| |  ||||||| ||||||||    
T  45361940 ggcatgcgcactggccaagcgttgttcctcctgagaatcgaacccggtattcccagggtacgtccttggaaggagctccttgccactgaagcccaaa 45362036  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 309
Target Start/End: Complemental strand, 34878059 - 34877937
Alignment:
Q  187 aatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagcttccc 286  Q
    |||||| |||||| || |||||||||| ||||  |||  |||||| | |||| ||||||||||  ||||| || | ||||||| |||||| | ||| |      
T  34878059 aatctggctcgtgtgtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaaggtgctcctt 34877960  T
Q  287 gccactggagcccaaacaacttg 309  Q
    ||||||| |||||||||||||||    
T  34877959 gccactgaagcccaaacaacttg 34877937  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 5143164 - 5143236
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtt 231  Q
    ||||||||| ||||||  ||||||| ||||||| | || |||||| |||||||||||||||| ||| |||||||    
T  5143164 ggttttcgatccatcaaaggtgagcgactaatccgtct-gtgcgtagaggcatgcgtactgaccaagcgttgtt 5143236  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 11397925 - 11398049
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| ||||| ||||| ||||||| || | ||  ||||||||||| | |||  ||||||||||| |||||  | |||||| || |||||| |||||     
T  11397925 actaatccgactcatgcgtagaggcatacgcattggccaaacgttgttcc-cctcggaatcgaacccggtattctccggatacatccttggaaggagctc 11398023  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  ||||||||||||||| |||||||    
T  11398024 cttgccactggagcccaagcaacttg 11398049  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 13262181 - 13262108
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtt 231  Q
    ||||||||| || ||| |||||  | ||||||| ||||||||||| ||| |||||||| ||| |||||||||||    
T  13262181 ggttttcgatccttcaatggtggacgactaatccgactcgtgcgtagagacatgcgtattgaccaaacgttgtt 13262108  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 26660210 - 26660085
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||| ||||| ||||||||||||||||||||| |||||| | | |   |||||||||| ||||| || | |||||||||| |||  | ||     
T  26660210 actaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaacccggtattccccgaatacgtcattcgaagaaactc 26660111  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
       ||||||||||||||| |||||||    
T  26660110 tttgccactggagcccaagcaacttg 26660085  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 31152788 - 31152663
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    |||||| ||||||||| || |||||| ||| ||||| ||| |||| || | ||    |||||||||| ||||| ||||| ||| || |||||| |||||     
T  31152788 actaatttgactcgtgtgtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattccctgggtacatccttggaaagagctc 31152689  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||| ||||||||||||||||    
T  31152688 cttgccactagagcccaaacaacttg 31152663  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 34334387 - 34334459
Alignment:
Q  240 gaatcgaacccagtatttcctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttgatt 312  Q
    ||||||||||| ||||| || ||||||||| |||||||||||| |  ||||||  |||| ||| |||||||||    
T  34334387 gaatcgaacccggtattccccggatacgtccttggaatgagctccttgccactaaagcctaaagaacttgatt 34334459  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 48761238 - 48761166
Alignment:
Q  194 ctcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatac 266  Q
    ||||||||| ||||||||   ||||| ||||||||||| ||| | | ||||||| ||||||||||| ||||||    
T  48761238 ctcgtgcgtagaggcatgtccactgaccaaacgttgttcctcttgaaaatcgaatccagtatttccgggatac 48761166  T

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Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 670 - 519
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||| ||||||| ||  ||||||| ||||||||| ||| | ||| |||||||||  |||||||||  |||||| | |||  ||||||||||| |||||     
T  670 ggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcgaatcgaacccggtattc 571  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || || |||||| |||||| ||||| |  |||||| |||||||| |||||||    
T  570 cccgggtacgtccttggaaggagctccttgccactagagcccaagcaacttg 519  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 68614 - 68466
Alignment:
Q  158 ggttttcgacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtattt 257  Q
    ||||||||||||| ||  |||| || ||||||| | ||||||||| |||||||||| ||    ||| ||||||| | |||  |||||||||||  |||||    
T  68614 ggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacc---caagcgttgttccccctgggaatcgaacccgatattt 68518  T
Q  258 cctggatacgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    || || |||||| |||||| ||||| |  |||||| ||||||||||||||||    
T  68517 cccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttg 68466  T

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Target: scaffold0209 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 12647 - 12524
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| ||||| ||||| |||||||||| |||| |||| ||||||| |  ||| ||||||||||| |||||||  |  |||||| ||||||  ||||     
T  12647 actaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttcc--ctaggaatcgaacccggtatttctcgagtacgtccttggaagtagctc 12550  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||| ||||||||||||||||    
T  12549 cttgccactagagcccaaacaacttg 12524  T

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Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 41118 - 40993
Alignment:
Q  184 actaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggatacgtcattggaatgagctt 283  Q
    ||||||| | ||||||||| |||||||||  ||||| |||  |||||| | | | ||||||||||||  |||| ||||  ||||||  ||||| |||||     
T  41118 actaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaacccgatattccctgagtacgtccatggaaggagctc 41019  T
Q  284 cccgccactggagcccaaacaacttg 309  Q
    |  |||||||||||||||||||||||    
T  41018 cttgccactggagcccaaacaacttg 40993  T

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Target: scaffold0376 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 309
Target Start/End: Complemental strand, 12763 - 12619
Alignment:
Q  165 gacccatcattggtgagcaactaatctgactcgtgcgtggaggcatgcgtactgatcaaacgttgtttctcctaagaatcgaacccagtatttcctggat 264  Q
    |||||||||  |||| || ||||||| |  |||||||| |||||||||  ||||  ||| ||||||| |||||  ||||||||||| ||||| || ||      
T  12763 gacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctctgaatcgaacccggtattccccgggc 12664  T
Q  265 acgtcattggaatgagcttcccgccactggagcccaaacaacttg 309  Q
    ||||| |||||| |||||||  |||||| ||| |||| |||||||    
T  12663 acgtccttggaaggagcttcttgccactagagtccaagcaacttg 12619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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