View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8902_low_45 (Length: 229)

Name: NF8902_low_45
Description: NF8902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8902_low_45
NF8902_low_45
[»] chr3 (10 HSPs)
chr3 (42-229)||(10792223-10792410)
chr3 (44-229)||(10778707-10778892)
chr3 (44-229)||(11886989-11887169)
chr3 (42-211)||(14683389-14683557)
chr3 (44-168)||(7396498-7396621)
chr3 (42-168)||(7341752-7341877)
chr3 (44-97)||(13299820-13299873)
chr3 (44-93)||(10139507-10139556)
chr3 (44-97)||(13310478-13310531)
chr3 (42-93)||(10170872-10170923)
[»] chr1 (6 HSPs)
chr1 (44-224)||(41383799-41383977)
chr1 (42-224)||(41368892-41369072)
chr1 (42-118)||(22086122-22086198)
chr1 (44-103)||(27561642-27561701)
chr1 (44-97)||(22809398-22809450)
chr1 (44-97)||(31845991-31846044)
[»] chr8 (12 HSPs)
chr8 (42-224)||(1735027-1735207)
chr8 (42-118)||(17426434-17426510)
chr8 (44-118)||(16668295-16668369)
chr8 (44-118)||(20193493-20193567)
chr8 (1-43)||(15333709-15333751)
chr8 (1-43)||(15422805-15422847)
chr8 (1-43)||(15514078-15514120)
chr8 (1-43)||(18802641-18802683)
chr8 (1-42)||(14980177-14980218)
chr8 (44-97)||(12821556-12821609)
chr8 (43-97)||(22352351-22352405)
chr8 (44-97)||(25389317-25389370)
[»] chr4 (9 HSPs)
chr4 (44-211)||(18108417-18108583)
chr4 (1-43)||(4103954-4103996)
chr4 (42-96)||(13277561-13277615)
chr4 (43-103)||(13292932-13292992)
chr4 (42-97)||(14714469-14714524)
chr4 (1-43)||(35184782-35184824)
chr4 (44-96)||(15154001-15154053)
chr4 (44-97)||(14776149-14776202)
chr4 (42-93)||(14557235-14557286)
[»] scaffold0101 (2 HSPs)
scaffold0101 (42-118)||(46604-46680)
scaffold0101 (42-118)||(51242-51318)
[»] scaffold0740 (1 HSPs)
scaffold0740 (42-118)||(5351-5427)
[»] scaffold0516 (1 HSPs)
scaffold0516 (42-118)||(11427-11503)
[»] chr7 (9 HSPs)
chr7 (44-170)||(14346188-14346312)
chr7 (44-118)||(14036208-14036282)
chr7 (42-104)||(14324059-14324121)
chr7 (44-118)||(44278005-44278079)
chr7 (1-43)||(48630974-48631016)
chr7 (43-171)||(18115509-18115633)
chr7 (43-171)||(18142077-18142201)
chr7 (44-97)||(1978547-1978600)
chr7 (44-97)||(18175201-18175254)
[»] scaffold0130 (3 HSPs)
scaffold0130 (46-97)||(28870-28921)
scaffold0130 (44-97)||(39600-39653)
scaffold0130 (42-97)||(29674-29729)
[»] scaffold0108 (2 HSPs)
scaffold0108 (42-97)||(43932-43987)
scaffold0108 (44-97)||(22758-22811)
[»] scaffold0064 (1 HSPs)
scaffold0064 (44-97)||(43492-43545)
[»] scaffold0022 (1 HSPs)
scaffold0022 (42-103)||(58237-58298)
[»] chr2 (8 HSPs)
chr2 (42-93)||(24954059-24954110)
chr2 (44-93)||(24967260-24967309)
chr2 (42-97)||(23190566-23190621)
chr2 (42-97)||(23611821-23611876)
chr2 (43-97)||(23204217-23204271)
chr2 (42-97)||(22648279-22648334)
chr2 (42-96)||(23615470-23615524)
chr2 (44-97)||(22633528-22633581)
[»] scaffold0304 (1 HSPs)
scaffold0304 (42-96)||(6127-6181)
[»] chr6 (7 HSPs)
chr6 (1-43)||(14963270-14963312)
chr6 (42-102)||(19025720-19025780)
chr6 (44-102)||(19038763-19038821)
chr6 (43-97)||(23431670-23431724)
chr6 (43-97)||(23496283-23496337)
chr6 (42-97)||(16209539-16209594)
chr6 (44-97)||(30755861-30755914)
[»] chr5 (6 HSPs)
chr5 (1-43)||(21301400-21301442)
chr5 (42-97)||(21530042-21530097)
chr5 (44-97)||(21504377-21504430)
chr5 (44-97)||(21982947-21983000)
chr5 (44-97)||(26274430-26274483)
chr5 (44-97)||(20506652-20506705)
[»] scaffold0270 (1 HSPs)
scaffold0270 (43-96)||(15555-15608)
[»] scaffold0358 (1 HSPs)
scaffold0358 (42-97)||(15458-15513)
[»] scaffold0323 (1 HSPs)
scaffold0323 (42-93)||(4250-4301)
[»] scaffold0026 (2 HSPs)
scaffold0026 (42-97)||(118639-118694)
scaffold0026 (44-97)||(142551-142604)
[»] scaffold0001 (2 HSPs)
scaffold0001 (42-97)||(389832-389887)
scaffold0001 (42-84)||(115696-115738)
[»] scaffold0080 (1 HSPs)
scaffold0080 (44-102)||(2172-2230)
[»] scaffold0021 (2 HSPs)
scaffold0021 (43-97)||(18835-18889)
scaffold0021 (43-97)||(28366-28420)
[»] scaffold0169 (1 HSPs)
scaffold0169 (43-96)||(35594-35647)
[»] scaffold0107 (1 HSPs)
scaffold0107 (42-103)||(28863-28924)
[»] scaffold0005 (1 HSPs)
scaffold0005 (44-97)||(63528-63581)
[»] scaffold0241 (1 HSPs)
scaffold0241 (42-97)||(24821-24876)
[»] scaffold0193 (1 HSPs)
scaffold0193 (42-97)||(27112-27167)
[»] scaffold0081 (1 HSPs)
scaffold0081 (42-97)||(44597-44652)
[»] scaffold0282 (1 HSPs)
scaffold0282 (44-97)||(9093-9145)


Alignment Details
Target: chr3 (Bit Score: 164; Significance: 8e-88; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 10792223 - 10792410
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaagga 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||||||||||    
T  10792223 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaaaatgaggcgtagctttgtggatggaattcatcgaaaagga 10792322  T
Q  142 tataagtctacttcagcaggaatcgaagaataagtttttgttcgacgagtaaaggatgttgtcgacgcgccttccaagtttttggata 229  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10792323 tataaatctacttcagcaggaatcgaagaataagtttttgttcgacgagtaaaggaagttgtcgacgcgccttccaagtttttggata 10792410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 44 - 229
Target Start/End: Original strand, 10778707 - 10778892
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaaggata 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||||||||||||    
T  10778707 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaaaatgaggcgtagctttgtggatggaattcatcgaaaaggata 10778806  T
Q  144 taagtctacttcagcaggaatcgaagaataagtttttgttcgacgagtaaaggatgttgtcgacgcgccttccaagtttttggata 229  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  10778807 taaatctacttcagcaggaatcgaagaataagtttttgttcaacgagtaaaggaagttgtcgacgcgccttccaagtttttggata 10778892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 44 - 229
Target Start/End: Original strand, 11886989 - 11887169
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaaggata 143  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||  |||||||||||  |||||| |||||||||||   |||    
T  11886989 tgttagccaatatttgtgaaaatataatcatttaatgcagtcaagggtttgacctaaagatggggcgtagctttagggatggaattcatcgaaa---ata 11887085  T
Q  144 taagtctacttcagcaggaatcgaagaataagtttttgttcgacgagtaaaggatgttgtcgacgcgccttccaagtttttggata 229  Q
     || |||||||||||||||||||||||||| |||||  ||||||  || ||||| |||||||||||||||||||||||||||||||    
T  11887086 caaatctacttcagcaggaatcgaagaataggtttt--ttcgacaggttaaggaagttgtcgacgcgccttccaagtttttggata 11887169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 42 - 211
Target Start/End: Complemental strand, 14683557 - 14683389
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaagga 141  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||| ||| ||  |||||||||||| | | |  || |||||||||  |    
T  14683557 tttgttagccaatttttgtgagaatatgatcatttaatgcagtcaagcatttgacctaaaaatggggcgtagctttgtgaaagaaatccatcgaaaa--a 14683460  T
Q  142 tataagtctacttcagcaggaatcgaagaataagttttt-gttcgacgagtaaaggatgttgtcgacgcgc 211  Q
    || |||| ||||||||||||||| ||||||   |||||| ||||||||  |||| || |||||||||||||    
T  14683459 tacaagtgtacttcagcaggaattgaagaagttgtttttagttcgacggataaaagaagttgtcgacgcgc 14683389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 168
Target Start/End: Complemental strand, 7396621 - 7396498
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaa-gggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaaggat 142  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| |||||||||| ||||||  |||| || |||| | |  | || |||||||||  ||    
T  7396621 tgttagccaatatttgtgagaatatgagcatttaatgcagtcaaggggtttgaccgaaagatggggcgaagttttgggaaaagaatccatcgaaaa--at 7396524  T
Q  143 ataagtctacttcagcaggaatcgaa 168  Q
    | || | |||||||||||||||||||    
T  7396523 acaaatgtacttcagcaggaatcgaa 7396498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 7341877 - 7341752
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaa-gggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaagg 140  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||| |||||||||| ||||||  |||| || |||| | |  | || |||||||||      
T  7341877 tttgttagccaatatttgtgagaatttgagcatttaatgcagtcaaggggtttgaccgaaagatggggcgaagttttgggaaaagaatccatcgaaaa-- 7341780  T
Q  141 atataagtctacttcagcaggaatcgaa 168  Q
    ||| || | |||||||||||||||||||    
T  7341779 atacaaatgtacttcagcaggaatcgaa 7341752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 13299873 - 13299820
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||| |||||||||| ||||  ||||||||||||||||||||||||||||    
T  13299873 tgttagccgatatttgtgagaatagtatcatttaatgcagtcaagggtttgacc 13299820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 10139507 - 10139556
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggttt 93  Q
    |||||||||||||||||||||||   |||||||||||||||||| |||||    
T  10139507 tgttagccaatatttgtgaaaatgctatcatttaatgcagtcaaaggttt 10139556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 13310531 - 13310478
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||| |||||||||| ||||  |||||||||||| |||||||||||||||    
T  13310531 tgttagccgatatttgtgagaatagtatcatttaatgctgtcaagggtttgacc 13310478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 10170872 - 10170923
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggttt 93  Q
    |||||||||| ||||||||||||||   |||||||||||||||||| |||||    
T  10170872 tttgttagccgatatttgtgaaaatgctatcatttaatgcagtcaaaggttt 10170923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 3e-53; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 44 - 224
Target Start/End: Complemental strand, 41383977 - 41383799
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaaggata 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  |||||||||||| |||  | || |||||||||  |||    
T  41383977 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacctaaaaatggggcgtagctttgtggaaagaatccatcgaaaa--ata 41383880  T
Q  144 taagtctacttcagcaggaatcgaagaataagtttttgttcgacgagtaaaggatgttgtcgacgcgccttccaagttttt 224  Q
     || ||||||||||||||||||||||| || |||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  41383879 caaatctacttcagcaggaatcgaagagtaggtttttgttcgacaggtaaaggaagttgtcgacgcgccttccaagttttt 41383799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 42 - 224
Target Start/End: Complemental strand, 41369072 - 41368892
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaagga 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  |||||||||||| |||  | || |||||||||  |    
T  41369072 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacctaaaaatggggcgtagctttgtggaaagaatccatcgaaaa--a 41368975  T
Q  142 tataagtctacttcagcaggaatcgaagaataagtttttgttcgacgagtaaaggatgttgtcgacgcgccttccaagttttt 224  Q
    || || |||||||||||| |||||||||| || |||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  41368974 tacaaatctacttcagcatgaatcgaagagtaggtttttgttcgacaggtaaaggaagttgtcgacgcgccttccaagttttt 41368892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 22086122 - 22086198
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttg 118  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  22086122 tttgttagtcaatatttgtgagaatatgatcatttaatgcagtcaagggtttgacccaaaaatagggcgtagctttg 22086198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 27561642 - 27561701
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaaga 103  Q
    |||||||| ||||||||||||||   |||||||||||||||||||||||||||| |||||    
T  27561642 tgttagccgatatttgtgaaaatgctatcatttaatgcagtcaagggtttgacctaaaga 27561701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 22809450 - 22809398
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||| |||||||||||||  | |||||||||||||||||| |||||||||    
T  22809450 tgttagccgatatttgtgaaaaagt-atcatttaatgcagtcaaaggtttgacc 22809398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 31846044 - 31845991
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||    |||||| ||| |||||||||||||||||    
T  31846044 tgttagccaatatttgtgaaaaggatatcattcaatacagtcaagggtttgacc 31845991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 42 - 224
Target Start/End: Original strand, 1735027 - 1735207
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaagga 141  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||   ||||||||||| |||  | || |||||||||  |    
T  1735027 tttgttagccaatatttgtaaaaatatgatcatttaatgcagtcaagggtttgaccaaaaaatggagcgtagctttgtggacagaatccatcgaaaa--a 1735124  T
Q  142 tataagtctacttcagcaggaatcgaagaataagtttttgttcgacgagtaaaggatgttgtcgacgcgccttccaagttttt 224  Q
    || || |||||||||| |||||||||||| |  ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  1735125 tacaaatctacttcagaaggaatcgaagagtgggtttttgttcgacaagtaaaggaagttgtcgacgcgccttccaagttttt 1735207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 17426510 - 17426434
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttg 118  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||    
T  17426510 tttgttagtcaatatttgtgagaatatgatcatttaatgcactcaagggtttgacccaaaaatagggcgtagctttg 17426434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 16668369 - 16668295
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttg 118  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||  |||| |||||||    
T  16668369 tgttagccaatatttgtgagaatatgagcatttaatgcagtcaagggtttgacctaaagatggggcgaagctttg 16668295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 20193567 - 20193493
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttg 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||  |  ||||||||||||    
T  20193567 tgttagtcaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacccaaaattggggcgtagctttg 20193493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15333751 - 15333709
Alignment:
Q  1 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15333751 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 15333709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15422847 - 15422805
Alignment:
Q  1 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15422847 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 15422805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15514120 - 15514078
Alignment:
Q  1 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15514120 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 15514078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18802683 - 18802641
Alignment:
Q  1 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18802683 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 18802641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14980177 - 14980218
Alignment:
Q  1 tcaacttgtgaagccttctccttaagagaatcaatctcagct 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14980177 tcaacttgtgaagccttctccttaagagaatcaatctcagct 14980218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 12821609 - 12821556
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||| ||||||||||||||| |  |||||||||| |||||||||||||||||    
T  12821609 tgttagtcaatatttgtgaaaagagtatcatttaatacagtcaagggtttgacc 12821556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 22352405 - 22352351
Alignment:
Q  43 ttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||||||||||||||||||    ||||||||||| |||||| |||||||||    
T  22352405 ttgttagccaatatttgtgaaaagggtatcatttaatgtagtcaaaggtttgacc 22352351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 25389370 - 25389317
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||| ||||||    |||||||||| |||||||||||||||||    
T  25389370 tgttagccaatatttatgaaaagggtatcatttaatacagtcaagggtttgacc 25389317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 18108417 - 18108583
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaaggata 143  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||  |||||||||||| | | |  || |||||||||  |||    
T  18108417 tgttagccaatatttgtgagaatatgatcatttaatgcagtcaagggtttgacctaaaaatggggcgtagctttgtgaaagaaatccatcgaaaa--ata 18108514  T
Q  144 taagtctacttcagcaggaatcgaagaataagttttt-gttcgacgagtaaaggatgttgtcgacgcgc 211  Q
     |||| ||||||||||||||||||||||   |||||| ||||||||  |||| || |||||||||||||    
T  18108515 caagtgtacttcagcaggaatcgaagaagttgtttttagttcgacggataaaagaagttgtcgacgcgc 18108583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4103996 - 4103954
Alignment:
Q  1 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4103996 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 4103954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 13277615 - 13277561
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgac 96  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||||||||    
T  13277615 tttgttagccgatatttgtgaaaatactatcatttaatgcagtcaagggtttgac 13277561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 13292992 - 13292932
Alignment:
Q  43 ttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaaga 103  Q
    ||||||||| ||||||||||||| |  |||||||||||||||||||||||||||| |||||    
T  13292992 ttgttagccgatatttgtgaaaagactatcatttaatgcagtcaagggtttgacctaaaga 13292932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 14714524 - 14714469
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||||||||||||||||||| |  |||||||||||||||||| |||||||||    
T  14714524 tttgttagccaatatttgtgaaaagagtatcatttaatgcagtcaaaggtttgacc 14714469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35184824 - 35184782
Alignment:
Q  1 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  35184824 tcaacttgtgaagccttatccttaagagaatcaatctcagctt 35184782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 15154053 - 15154001
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgac 96  Q
    |||||||| ||||||||||||| |  |||||||||||||||||||||||||||    
T  15154053 tgttagccgatatttgtgaaaacactatcatttaatgcagtcaagggtttgac 15154001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 14776202 - 14776149
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||||||||||||||||| |  |||||||||||||||||| || ||||||    
T  14776202 tgttagccaatatttgtgaaaagagtatcatttaatgcagtcaaagggttgacc 14776149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 14557286 - 14557235
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggttt 93  Q
    |||||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  14557286 tttgttagccgatatttgtgaaaacactatcatttaatgcagtcaagagttt 14557235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 46680 - 46604
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttg 118  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  46680 tttgttagtcaatatttgtgagaatatgatcatttaatgcagtcaagggtttgacccaaaaatagggcgtagctttg 46604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 51318 - 51242
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttg 118  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  51318 tttgttagtcaatatttgtgagaatatgatcatttaatgcagtcaagggtttgacccaaaaatagggcgtagctttg 51242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 5351 - 5427
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttg 118  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||    
T  5351 tttgttagtcaatatttgtgagaatatgatcatttaatgcagtcaagggtttgacccaaaaatggggcgtagctttg 5427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 11503 - 11427
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||  |  ||||||||||||    
T  11503 tttgttagtcaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacccaaaattggggcgtagctttg 11427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 14346312 - 14346188
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaaggata 143  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||  |||| ||||||| | | |  || |||||||||  |||    
T  14346312 tgttagccaatatttgtgagaatatgagcatttaatgcagtcaagggtttgaccgaaagatggggcgaagctttgagaaagaaatccatcgaaaa--ata 14346215  T
Q  144 taagtctacttcagcaggaatcgaaga 170  Q
     || | | |||||||||||||||||||    
T  14346214 caaatgtgcttcagcaggaatcgaaga 14346188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 14036282 - 14036208
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttg 118  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||  |||| |||||||    
T  14036282 tgttagccaatatttgtgagaatatgagcatttaatgcagtcaagggtttgaccgaaagatggggcgaagctttg 14036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 14324121 - 14324059
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagat 104  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||    
T  14324121 tttgttagccaatatttgtgagaatatgagcatttaatgcagtcaagggtttgaccgaaagat 14324059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 44278079 - 44278005
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttg 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||  |  ||||||||||||    
T  44278079 tgttagtcaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacccaaaattggggcgtagctttg 44278005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 48631016 - 48630974
Alignment:
Q  1 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  48631016 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 48630974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 171
Target Start/End: Complemental strand, 18115633 - 18115509
Alignment:
Q  43 ttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaaggat 142  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||  |||||||| ||| ||  ||||||||||||  ||  | || |||||||||  ||    
T  18115633 ttgttagccaatatttgtggaaatatgaccatttaatgcagtcaaacgtttgacctaaa-atggggcgtagctttg-tgaaagaatccatcgaaaa--at 18115538  T
Q  143 ataagtctacttcagcaggaatcgaagaa 171  Q
      |||| ||||||||||||||||||||||    
T  18115537 gcaagtttacttcagcaggaatcgaagaa 18115509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 171
Target Start/End: Complemental strand, 18142201 - 18142077
Alignment:
Q  43 ttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaagataaggcgtagctttgcggatgggattcatcgaaaaggat 142  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||  |||||||| ||| ||  ||||||||||||  ||  | || |||||||||  ||    
T  18142201 ttgttagccaatatttgtggaaatatgaccatttaatgcagtcaaacgtttgacctaaa-atggggcgtagctttg-tgaaagaatccatcgaaaa--at 18142106  T
Q  143 ataagtctacttcagcaggaatcgaagaa 171  Q
      |||| ||||||||||||||||||||||    
T  18142105 gcaagtttacttcagcaggaatcgaagaa 18142077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 1978600 - 1978547
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||    |||||||||| | |||||||||||||||    
T  1978600 tgttagccaatatttgtgaaaagggtatcatttaatactgtcaagggtttgacc 1978547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 18175254 - 18175201
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||| ||||| |||||||||  |||||||||||  |||||||||||||||    
T  18175254 tgttagccgatattggtgaaaatactatcatttaatgtggtcaagggtttgacc 18175201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 28921 - 28870
Alignment:
Q  46 ttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28921 ttagccaatatttgtgagaatatgatcatttaatgcagtcaagggtttgacc 28870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 39600 - 39653
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||| |||||||||||||||| |||| ||||||  |||||||||||||||    
T  39600 tgttagccgatatttgtgaaaatattatcaattaatgtggtcaagggtttgacc 39653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 29729 - 29674
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||||    |||||||||| ||||||| |||||||||    
T  29729 tttgttagccaatatttgtgaaaagggtatcatttaatacagtcaaaggtttgacc 29674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 43932 - 43987
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  43932 tttgttagccgatatttgtgaaaatattatcatttaatgcagtcaagggtttgacc 43987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 22758 - 22811
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  22758 tgttagccgatatttgtgaaaatattatcatttaatgcagtcaagggtttgacc 22811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 43545 - 43492
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  43545 tgttagccgatatttgtgaaaatattatcatttaatgcagtcaagggtttgacc 43492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 58237 - 58298
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaaga 103  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  58237 tttgttagccgatatttgtgaaaatactatcatttaatgcagtcaagggtttgacctaaaga 58298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 24954059 - 24954110
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggttt 93  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24954059 tttgttagccaatatttgtgagaatatgagcatttaatgcagtcaagggttt 24954110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 24967260 - 24967309
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggttt 93  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24967260 tgttagccaatatttgtgagaatatgagcatttaatgcagtcaagggttt 24967309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 23190621 - 23190566
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||||| |||||||||||||||  |||||||||||  |||||||||||||||    
T  23190621 tttgttagccgatatttgtgaaaatactatcatttaatgtggtcaagggtttgacc 23190566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 23611876 - 23611821
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||||| |||||||||||||||  |||||||||||  |||||||||||||||    
T  23611876 tttgttagccgatatttgtgaaaatactatcatttaatgtggtcaagggtttgacc 23611821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 23204271 - 23204217
Alignment:
Q  43 ttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||| |||||||||||||||  |||||||||||  |||||||||||||||    
T  23204271 ttgttagccgatatttgtgaaaatactatcatttaatgtggtcaagggtttgacc 23204217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 22648279 - 22648334
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||| || |||||||||||||||  |||||||||||  |||||||||||||||    
T  22648279 tttgttacccgatatttgtgaaaatactatcatttaatgtggtcaagggtttgacc 22648334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 23615524 - 23615470
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgac 96  Q
    ||||||| || |||||||||||||||  |||||||||||  ||||||||||||||    
T  23615524 tttgttaaccgatatttgtgaaaatactatcatttaatgtggtcaagggtttgac 23615470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 22633528 - 22633581
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||| ||||||||||||||   |||||||||||  |||||||||||||||    
T  22633528 tgttagccgatatttgtgaaaattctatcatttaatgtggtcaagggtttgacc 22633581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 6181 - 6127
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgac 96  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||||||||    
T  6181 tttgttagccgatatttgtgaaaatactatcatttaatgcagtcaagggtttgac 6127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14963312 - 14963270
Alignment:
Q  1 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14963312 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 14963270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 19025780 - 19025720
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaag 102  Q
    |||||||||| ||||||||||||||   |||||||||||||||||||||||||||| ||||    
T  19025780 tttgttagccgatatttgtgaaaatgctatcatttaatgcagtcaagggtttgacctaaag 19025720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 19038821 - 19038763
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaag 102  Q
    |||||||| ||||||||||||||   ||||||||||| |||||||||||||||| ||||    
T  19038821 tgttagccgatatttgtgaaaatgctatcatttaatgtagtcaagggtttgacctaaag 19038763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 23431670 - 23431724
Alignment:
Q  43 ttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||| |||||||||||||||  |||||||||||  |||||||||||||||    
T  23431670 ttgttagccgatatttgtgaaaatactatcatttaatgtggtcaagggtttgacc 23431724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 23496283 - 23496337
Alignment:
Q  43 ttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||| |||||||||||||||  |||||||||||  |||||||||||||||    
T  23496283 ttgttagccgatatttgtgaaaatactatcatttaatgtggtcaagggtttgacc 23496337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 16209539 - 16209594
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||||    ||||||||||||||||||  ||||||||    
T  16209539 tttgttagccaatatttgtgaaaagggtatcatttaatgcagtcaaaagtttgacc 16209594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 30755914 - 30755861
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||    |||||||||| ||||||| |||||||||    
T  30755914 tgttagccaatatttgtgaaaagggtatcatttaatacagtcaaaggtttgacc 30755861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21301400 - 21301442
Alignment:
Q  1 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21301400 tcaacttgtgaagccttctccttaagagaatcaatctcagctt 21301442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 21530042 - 21530097
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||||    |||||||||||||||||| |||||||||    
T  21530042 tttgttagccaatatttgtgaaaaggctatcatttaatgcagtcaaaggtttgacc 21530097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 21504377 - 21504430
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||    |||||||||||||||||| |||||||||    
T  21504377 tgttagccaatatttgtgaaaaggctatcatttaatgcagtcaaaggtttgacc 21504430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 21983000 - 21982947
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||    |||||||||||||||||| |||||||||    
T  21983000 tgttagccaatatttgtgaaaagggtatcatttaatgcagtcaaaggtttgacc 21982947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 26274483 - 26274430
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||    |||||||||||||||||| |||||||||    
T  26274483 tgttagccaatatttgtgaaaaggctatcatttaatgcagtcaaaggtttgacc 26274430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 20506705 - 20506652
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||    |||||||||| ||||||| |||||||||    
T  20506705 tgttagccaatatttgtgaaaagggtatcatttaatacagtcaaaggtttgacc 20506652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 15608 - 15555
Alignment:
Q  43 ttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgac 96  Q
    ||||||||| |||||||||||||||  ||||||||||||||||| |||||||||    
T  15608 ttgttagccgatatttgtgaaaatactatcatttaatgcagtcacgggtttgac 15555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 15458 - 15513
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||||    |||||||||| |||||||||||||||||    
T  15458 tttgttagccaatatttgtgaaaagggtatcatttaatacagtcaagggtttgacc 15513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 4250 - 4301
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggttt 93  Q
    |||||||||| |||||||||| ||||  ||||||||||||||||||||||||    
T  4250 tttgttagccgatatttgtgagaatagtatcatttaatgcagtcaagggttt 4301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 118694 - 118639
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||||    |||||||||||||||||| |||||||||    
T  118694 tttgttagccaatatttgtgaaaagggtatcatttaatgcagtcaaaggtttgacc 118639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 142604 - 142551
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||    |||||||||||||||||| |||||||||    
T  142604 tgttagccaatatttgtgaaaagggtatcatttaatgcagtcaaaggtttgacc 142551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 389832 - 389887
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||||    |||||||||| |||||||||||||||||    
T  389832 tttgttagccaatatttgtgaaaagggtatcatttaatacagtcaagggtttgacc 389887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 115738 - 115696
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagt 84  Q
    ||||||||||||||||||||||||  | |||||||||||||||    
T  115738 tttgttagccaatatttgtgaaaagtttatcatttaatgcagt 115696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 2172 - 2230
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaag 102  Q
    |||||||| ||||||||||||||   ||||||||||||||||||||||| |||| ||||    
T  2172 tgttagccgatatttgtgaaaatgctatcatttaatgcagtcaagggttggacctaaag 2230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 18889 - 18835
Alignment:
Q  43 ttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||||||||||||||||||    |||||||||||||||||| |||||||||    
T  18889 ttgttagccaatatttgtgaaaaggctatcatttaatgcagtcaaaggtttgacc 18835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 28420 - 28366
Alignment:
Q  43 ttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||||||||||||||||||    |||||||||||||||||| |||||||||    
T  28420 ttgttagccaatatttgtgaaaaggctatcatttaatgcagtcaaaggtttgacc 28366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 35594 - 35647
Alignment:
Q  43 ttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgac 96  Q
    ||||||||| |||||| ||||||||  ||||||||||||||||| |||||||||    
T  35594 ttgttagccgatatttatgaaaatactatcatttaatgcagtcacgggtttgac 35647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 28863 - 28924
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgaccaaaaga 103  Q
    |||||||||| ||||||||||||| |  |||||||||| ||||||| ||||||||| |||||    
T  28863 tttgttagccgatatttgtgaaaagagtatcatttaatacagtcaaaggtttgacctaaaga 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 63528 - 63581
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||||||||||||||||| |  |||||||||||||||||| || ||||||    
T  63528 tgttagccaatatttgtgaaaagagtatcatttaatgcagtcaaagggttgacc 63581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 24821 - 24876
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    ||||||||||||||||||||||||    |||||||||||||||||| || ||||||    
T  24821 tttgttagccaatatttgtgaaaaggctatcatttaatgcagtcaaaggcttgacc 24876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 27167 - 27112
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||||||||||||||||| |    |||||||||||||||||| |||||||||    
T  27167 tttgttagccaatatttgtgaagaggctatcatttaatgcagtcaaaggtttgacc 27112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 44652 - 44597
Alignment:
Q  42 tttgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||||||||||||||||| |    |||||||||||||||||| |||||||||    
T  44652 tttgttagccaatatttgtgaagaggctatcatttaatgcagtcaaaggtttgacc 44597  T

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Target: scaffold0282 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 9145 - 9093
Alignment:
Q  44 tgttagccaatatttgtgaaaatatgatcatttaatgcagtcaagggtttgacc 97  Q
    |||||||| |||||||||||||  | |||||||||||||||||| |||||||||    
T  9145 tgttagccgatatttgtgaaaaagt-atcatttaatgcagtcaaaggtttgacc 9093  T

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