View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8902_low_9 (Length: 542)

Name: NF8902_low_9
Description: NF8902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8902_low_9
NF8902_low_9
[»] chr3 (10 HSPs)
chr3 (20-335)||(1425843-1426158)
chr3 (20-337)||(1447933-1448250)
chr3 (180-337)||(1470578-1470734)
chr3 (75-123)||(1470464-1470512)
chr3 (412-463)||(30345278-30345329)
chr3 (279-336)||(19757714-19757771)
chr3 (286-336)||(19736812-19736862)
chr3 (412-453)||(25191130-25191171)
chr3 (279-336)||(51448288-51448345)
chr3 (279-336)||(52138474-52138531)
[»] chr8 (11 HSPs)
chr8 (282-532)||(43732226-43732475)
chr8 (416-463)||(13984789-13984836)
chr8 (279-336)||(15215849-15215906)
chr8 (424-463)||(10824568-10824607)
chr8 (413-460)||(33830716-33830763)
chr8 (278-337)||(41444882-41444941)
chr8 (412-453)||(4032984-4033025)
chr8 (410-447)||(6510913-6510950)
chr8 (279-336)||(12492421-12492478)
chr8 (279-336)||(36565820-36565877)
chr8 (423-463)||(30113676-30113716)
[»] chr2 (8 HSPs)
chr2 (412-463)||(17581219-17581270)
chr2 (412-463)||(6238233-6238284)
chr2 (412-453)||(41197718-41197759)
chr2 (279-337)||(11992685-11992743)
chr2 (279-336)||(2610174-2610231)
chr2 (412-453)||(4807343-4807384)
chr2 (279-336)||(8180426-8180483)
chr2 (412-453)||(45368114-45368155)
[»] chr7 (7 HSPs)
chr7 (412-453)||(33072705-33072746)
chr7 (412-453)||(31004974-31005015)
chr7 (279-336)||(32630253-32630310)
chr7 (412-453)||(33350296-33350337)
chr7 (412-453)||(37616667-37616708)
chr7 (412-453)||(46356341-46356382)
chr7 (279-336)||(46356430-46356487)
[»] chr1 (12 HSPs)
chr1 (412-460)||(46226765-46226813)
chr1 (412-463)||(34827582-34827633)
chr1 (412-463)||(27445649-27445700)
chr1 (414-445)||(52739965-52739996)
chr1 (486-532)||(7814326-7814372)
chr1 (412-446)||(9592485-9592519)
chr1 (279-336)||(8671566-8671623)
chr1 (412-453)||(32066761-32066802)
chr1 (412-453)||(51441254-51441295)
chr1 (279-336)||(51601704-51601761)
chr1 (424-464)||(7814226-7814266)
chr1 (37-121)||(52442825-52442909)
[»] chr5 (8 HSPs)
chr5 (413-463)||(20077297-20077347)
chr5 (412-453)||(1288079-1288120)
chr5 (412-453)||(24178275-24178316)
chr5 (416-463)||(36200537-36200584)
chr5 (279-336)||(2076053-2076110)
chr5 (279-336)||(3301495-3301552)
chr5 (279-336)||(3394356-3394413)
chr5 (279-336)||(20318637-20318694)
[»] chr4 (13 HSPs)
chr4 (279-337)||(10775998-10776056)
chr4 (412-463)||(3273173-3273224)
chr4 (412-463)||(17666518-17666569)
chr4 (413-463)||(8917807-8917857)
chr4 (497-531)||(28277758-28277792)
chr4 (279-336)||(435875-435932)
chr4 (279-336)||(23906880-23906937)
chr4 (412-453)||(27450663-27450704)
chr4 (288-337)||(30807243-30807292)
chr4 (279-336)||(33226855-33226912)
chr4 (412-453)||(33226960-33227001)
chr4 (279-336)||(39708103-39708160)
chr4 (279-336)||(48174672-48174729)
[»] scaffold0113 (1 HSPs)
scaffold0113 (279-334)||(12177-12232)
[»] chr6 (3 HSPs)
chr6 (412-447)||(33495948-33495983)
chr6 (279-336)||(10100436-10100493)
chr6 (279-336)||(20428215-20428272)
[»] scaffold0570 (1 HSPs)
scaffold0570 (279-336)||(2849-2906)
[»] scaffold0171 (1 HSPs)
scaffold0171 (279-336)||(5838-5895)
[»] scaffold0018 (1 HSPs)
scaffold0018 (412-453)||(31219-31260)


Alignment Details
Target: chr3 (Bit Score: 263; Significance: 1e-146; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 20 - 335
Target Start/End: Original strand, 1425843 - 1426158
Alignment:
Q  20 agctctaattctatcccgtctaatcttactataaatcgaacacaacttcctcatatctactatgcttaatttatgtttgtgctgattgtttaccaccaaa 119  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  1425843 agctctaattctattccgtctaatcttactatacatccaacacaacgtcctcatatctactatgcttaatttatgtttttgctggttgtttaccaccaaa 1425942  T
Q  120 catcatcagctttattgatgttcgatnnnnnnnttctttcaacatgaacggtactttcgaatcacacaaaacacacgaggcattcgtctagttcaaccac 219  Q
    ||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1425943 catcatcagctttattgatgttcgataaaaaaattctttcaacgtgaacggtactttcgaatcacacaaaacacacgaggcattcgtctagttcaaccac 1426042  T
Q  220 ccatccatgggtttgatgatttacatctccttctatttatttgttgtttttcttcataaacccaaaatatttaaaccatacaacttttggtataatatga 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1426043 ccatccatgggtttgatgatttacatctccttctatttatttgttgtttttctttataaacccaaaatatttaaaccatacaacttttggtataatatga 1426142  T
Q  320 tctccaactttcacct 335  Q
    ||||||||||||||||    
T  1426143 tctccaactttcacct 1426158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 20 - 337
Target Start/End: Original strand, 1447933 - 1448250
Alignment:
Q  20 agctctaattctatcccgtctaatcttactataaatcgaacacaacttcctcatatctactatgcttaatttatgtttgtgctgattgtttaccaccaaa 119  Q
    |||||||||| |||||| |||| |||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||| || |||||||||||||||    
T  1447933 agctctaattttatcccctctagtcttactacacatccaacacaacttcttcatatctattatgcttaatttatgtttgtgttggttgtttaccaccaaa 1448032  T
Q  120 catcatcagctttattgatgttcgatnnnnnnnttctttcaaca--tgaacggtactttcgaatcacacaaaacacacgaggcattcgtctagttcaacc 217  Q
    ||||||||| ||||||||||||||||       || ||||||||  |||   ||||||||| |||||| |||||||||||||||||| || | |||||||    
T  1448033 catcatcagttttattgatgttcgataaaaat-ttatttcaacacgtgagtagtactttcgcatcacataaaacacacgaggcattcctccatttcaacc 1448131  T
Q  218 acccatccatgggtttgatgatttacatctccttctatttatttgttgtttttcttcataaacccaaaatatttaaaccatacaacttttggtataatat 317  Q
    |||||| || || ||||||||||||||||||||| ||||| |||||||||||||   |||||||||||||||||||||||| ||||||||| ||| ||||    
T  1448132 acccatgcaagg-tttgatgatttacatctccttttatttctttgttgtttttcactataaacccaaaatatttaaaccatgcaacttttgatatgatat 1448230  T
Q  318 gatctccaactttcacctct 337  Q
    ||||||||||||| ||||||    
T  1448231 gatctccaacttttacctct 1448250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 180 - 337
Target Start/End: Original strand, 1470578 - 1470734
Alignment:
Q  180 atcacacaaaacacacgaggcattcgtctagttcaaccacccatccatgggtttgatgatttacatctccttctatttatttgttgtttttcttcataaa 279  Q
    |||||| |||| |||| || ||||| || | ||| |||||||||| | |||||||||||||||||| |||||||||| ||||||||||||||   |||||    
T  1470578 atcacataaaatacacaagacattcctccatttctaccacccatcta-gggtttgatgatttacatttccttctattcatttgttgtttttcactataaa 1470676  T
Q  280 cccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctct 337  Q
    || |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  1470677 ccaaaaatatttaaaccatgcaacttttggtatgatatgatctccaactttcacctct 1470734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 1470464 - 1470512
Alignment:
Q  75 tctactatgcttaatttatgtttgtgctgattgtttaccaccaaacatc 123  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||    
T  1470464 tctactatgcttaatttatgtttgtgttggttgcttaccaccaaacatc 1470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 463
Target Start/End: Original strand, 30345278 - 30345329
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    ||||||||||| |||||||||||||||||||||||| ||||| |||| ||||    
T  30345278 attcaagttgggtggttgaaatggagaagagtctcaggtgttttatgcgata 30345329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 19757771 - 19757714
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| |||||||||||||  |||||  ||||| |||||||||||||||||||||||    
T  19757771 acccaagatatttaaaccatgtaacttggggtatgatatgatctccaactttcacctc 19757714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 19736862 - 19736812
Alignment:
Q  286 atatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||||||||||  |||||  ||||| |||||||||||||||||||||||    
T  19736862 atatttaaaccatgtaacttggggtatgatatgatctccaactttcacctc 19736812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 25191130 - 25191171
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||| ||| |||||||||||||||||||||||| |||||    
T  25191130 attcaagctgggtggttgaaatggagaagagtctcaggtgtt 25191171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 51448288 - 51448345
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  51448288 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 51448345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 52138531 - 52138474
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  52138531 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 52138474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 203; Significance: 1e-110; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 282 - 532
Target Start/End: Original strand, 43732226 - 43732475
Alignment:
Q  282 caaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctctgtatgatatgattttctactttcacctctcattcttttaccatt 381  Q
    ||||||||||||||| |   |||| || ||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  43732226 caaaatatttaaaccgtgttacttgtgctatgatatgatctccaactttcacct-tctatgatatgattttctactttcacctctcattcttttaccatt 43732324  T
Q  382 gatcacccaatgtatattttttaaactagcattcaagttggatggttgaaatggagaagagtctcaagtgttatatgtgatatcaaagccacgcttaaga 481  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43732325 gatcacccaatgtatattttttaaactagcattcaagttgggtggttgaaatggagaagagtctcaagtgttatatgtgatatcaaagccccgcttaaga 43732424  T
Q  482 cgctttgtatggagcagaatgttggacggtgaagaaccaacacaagaataa 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43732425 cgctttgtatggagcagaatgttggacggtgaagaaccaacacaagaataa 43732475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 463
Target Start/End: Original strand, 13984789 - 13984836
Alignment:
Q  416 aagttggatggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||||    
T  13984789 aagttggatggttgaaatgaagaagagcctcaagtgttttatgtgata 13984836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 15215849 - 15215906
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||| ||||| |||||||||||||||||||||||    
T  15215849 acccaatatatttaaaccgtgtaactttgggtatgatatgatctccaactttcacctc 15215906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 463
Target Start/End: Complemental strand, 10824607 - 10824568
Alignment:
Q  424 tggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  10824607 tggttgaaatggagaagagtctcaggtgttttatgtgata 10824568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 460
Target Start/End: Complemental strand, 33830763 - 33830716
Alignment:
Q  413 ttcaagttggatggttgaaatggagaagagtctcaagtgttatatgtg 460  Q
    |||||||||||||||| |||||  ||||||||||||||||| ||||||    
T  33830763 ttcaagttggatggttaaaatgttgaagagtctcaagtgttttatgtg 33830716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 41444882 - 41444941
Alignment:
Q  278 aacccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctct 337  Q
    ||||||| ||||||||||||   ||||| |||||| |||||||||||| |||||||||||    
T  41444882 aacccaagatatttaaaccaagtaacttgtggtatgatatgatctccacctttcacctct 41444941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 4033025 - 4032984
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||||||| ||||||||||||||||||| |||| |||||    
T  4033025 attcaagttgggtggttgaaatggagaagagcctcaggtgtt 4032984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 6510950 - 6510913
Alignment:
Q  410 gcattcaagttggatggttgaaatggagaagagtctca 447  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  6510950 gcattcaagttgagtggttgaaatggagaagagtctca 6510913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 12492421 - 12492478
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  12492421 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 12492478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 36565820 - 36565877
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  36565820 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 36565877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 463
Target Start/End: Complemental strand, 30113716 - 30113676
Alignment:
Q  423 atggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    |||||||||||||||||||||| || ||||| |||||||||    
T  30113716 atggttgaaatggagaagagtcgcaggtgttttatgtgata 30113676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 463
Target Start/End: Original strand, 17581219 - 17581270
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  17581219 attcaagttggatggttcaaatggagaagagtctcaggtgttttatgtgata 17581270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 6238284 - 6238233
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    ||||||||||||||||||||||||||||||| |||| ||||| | |||||||    
T  6238284 attcaagttggatggttgaaatggagaagagcctcatgtgttttgtgtgata 6238233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 41197759 - 41197718
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  41197759 attcaagttgggtggttgaaatggagaagagtctcaggtgtt 41197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 11992685 - 11992743
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctct 337  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||||    
T  11992685 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctct 11992743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 2610231 - 2610174
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  2610231 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 2610174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 4807343 - 4807384
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||| ||| |||||||||||||||||||||||| |||||    
T  4807343 attcaagatgggtggttgaaatggagaagagtctcaggtgtt 4807384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 8180483 - 8180426
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||||||||||||||| |  |||||   |||| |||||||||||||||||||||||    
T  8180483 acccaaaatatttaaaccgtgtaacttggagtatgatatgatctccaactttcacctc 8180426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 45368155 - 45368114
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||| ||| |||||||||||||||||||||||| |||||    
T  45368155 attcaagctgggtggttgaaatggagaagagtctcaggtgtt 45368114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 33072705 - 33072746
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  33072705 attcaagttggatggttgaaatggagaagagcctcaagtgtt 33072746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 31004974 - 31005015
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||||||| ||||||||||||||||||| |||| |||||    
T  31004974 attcaagttgggtggttgaaatggagaagagcctcaggtgtt 31005015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 32630310 - 32630253
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  32630310 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 32630253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 33350337 - 33350296
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||    
T  33350337 attcaagctgggtggttgaaatggagaagagcctcaagtgtt 33350296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 37616667 - 37616708
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||    
T  37616667 attcaagctgggtggttgaaatggagaagagcctcaagtgtt 37616708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 46356382 - 46356341
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||||||| ||||||||||||||||||| |||| |||||    
T  46356382 attcaagttgggtggttgaaatggagaagagcctcaggtgtt 46356341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 46356430 - 46356487
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  46356430 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 46356487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 460
Target Start/End: Complemental strand, 46226813 - 46226765
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgttatatgtg 460  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  46226813 attcaagttggatggttgaaatggagaagagcatcaagtgttttatgtg 46226765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 34827633 - 34827582
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    |||||||||| |||||||||||||||||||| |||| ||||| |||||||||    
T  34827633 attcaagttgaatggttgaaatggagaagagcctcatgtgttttatgtgata 34827582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 463
Target Start/End: Original strand, 27445649 - 27445700
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    ||||||||||| ||||||||||||||||||||  | |||||| |||||||||    
T  27445649 attcaagttggttggttgaaatggagaagagttccgagtgttttatgtgata 27445700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 52739996 - 52739965
Alignment:
Q  414 tcaagttggatggttgaaatggagaagagtct 445  Q
    ||||||||||||||||||||||||||||||||    
T  52739996 tcaagttggatggttgaaatggagaagagtct 52739965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 532
Target Start/End: Original strand, 7814326 - 7814372
Alignment:
Q  486 ttgtatggagcagaatgttggacggtgaagaaccaacacaagaataa 532  Q
    ||||||||| |||||||||||| ||| |||||||||||| |||||||    
T  7814326 ttgtatggaacagaatgttggatggttaagaaccaacacgagaataa 7814372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 446
Target Start/End: Original strand, 9592485 - 9592519
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctc 446  Q
    ||||||||||| |||||||||||||||||||||||    
T  9592485 attcaagttgggtggttgaaatggagaagagtctc 9592519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 8671623 - 8671566
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  8671623 acccaagatatttaaaccgtgtaacttagggtatgatatgatctccaactttcacctc 8671566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 32066802 - 32066761
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||||||||||||| ||||||||||||| |||| |||||    
T  32066802 attcaagttggatggttaaaatggagaagagcctcaggtgtt 32066761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 51441295 - 51441254
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||    
T  51441295 attcaagctgggtggttgaaatggagaagagcctcaagtgtt 51441254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 51601761 - 51601704
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  51601761 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 51601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 7814226 - 7814266
Alignment:
Q  424 tggttgaaatggagaagagtctcaagtgttatatgtgatat 464  Q
    |||||||||||  ||||||||||||||||| ||||||||||    
T  7814226 tggttgaaatgaggaagagtctcaagtgttttatgtgatat 7814266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 52442825 - 52442909
Alignment:
Q  37 gtctaatcttactataaatcgaacacaacttcctcatatctactatgcttaatttatgtttgtgctgattgtttaccaccaaaca 121  Q
    ||||| |||||| | | ||| |||||||| ||||||| ||| ||| ||||||||||| |||||| || ||  |||||||||||||    
T  52442825 gtctagtcttaccacacatccaacacaacatcctcatgtctgctacgcttaatttatttttgtgttgtttcattaccaccaaaca 52442909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 463
Target Start/End: Complemental strand, 20077347 - 20077297
Alignment:
Q  413 ttcaagttggatggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    |||| ||||||||||||||||||||||||| |||| ||||| |||||||||    
T  20077347 ttcaggttggatggttgaaatggagaagagcctcaggtgttttatgtgata 20077297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 1288120 - 1288079
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||||||||||||||||||||||||||| |||| |||||    
T  1288120 attcaagttggatggttgaaatggagaagagcctcatgtgtt 1288079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 24178275 - 24178316
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||||||| ||||||||||||||||||| ||||||||||    
T  24178275 attcaagttgggtggttgaaatggagaagagcctcaagtgtt 24178316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 463
Target Start/End: Original strand, 36200537 - 36200584
Alignment:
Q  416 aagttggatggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    ||||||| ||||||||||||||||||| |||| ||||| |||||||||    
T  36200537 aagttgggtggttgaaatggagaagagactcatgtgttttatgtgata 36200584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 2076053 - 2076110
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  2076053 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 2076110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 3301552 - 3301495
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  3301552 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 3301495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 3394413 - 3394356
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  3394413 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 3394356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 20318694 - 20318637
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  20318694 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 20318637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 10775998 - 10776056
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctct 337  Q
    |||||| |||||||||||||  ||||| |||||| |||||||||||||||||| |||||    
T  10775998 acccaagatatttaaaccatgtaacttgtggtatgatatgatctccaactttcccctct 10776056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 463
Target Start/End: Original strand, 3273173 - 3273224
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    ||||||||||||||||||||||||||| ||| ||||  |||| |||||||||    
T  3273173 attcaagttggatggttgaaatggagatgagcctcatttgttttatgtgata 3273224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 17666569 - 17666518
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    ||||||||||||| |||||||||||||||||  ||| ||||| |||||||||    
T  17666569 attcaagttggattgttgaaatggagaagagcatcatgtgttttatgtgata 17666518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 463
Target Start/End: Complemental strand, 8917857 - 8917807
Alignment:
Q  413 ttcaagttggatggttgaaatggagaagagtctcaagtgttatatgtgata 463  Q
    ||||||||||||  ||||||| |||||||| |||||||||| |||||||||    
T  8917857 ttcaagttggataattgaaattgagaagagcctcaagtgttttatgtgata 8917807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 531
Target Start/End: Complemental strand, 28277792 - 28277758
Alignment:
Q  497 agaatgttggacggtgaagaaccaacacaagaata 531  Q
    |||||||||||| ||||||||||||||||||||||    
T  28277792 agaatgttggacagtgaagaaccaacacaagaata 28277758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 435932 - 435875
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  435932 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 435875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 23906880 - 23906937
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  23906880 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 23906937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 27450704 - 27450663
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||    
T  27450704 attcaagctgggtggttgaaatggagaagagcctcaagtgtt 27450663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 30807292 - 30807243
Alignment:
Q  288 atttaaaccatacaacttttggtataatatgatctccaactttcacctct 337  Q
    ||||||||| |  ||||| |||||| ||||||||||||||||||||||||    
T  30807292 atttaaaccgtgtaacttgtggtatgatatgatctccaactttcacctct 30807243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 33226912 - 33226855
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  33226912 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 33226855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 33226960 - 33227001
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||| ||| |||||||||||||||||||||||| |||||    
T  33226960 attcaagctgggtggttgaaatggagaagagtctcaggtgtt 33227001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 39708160 - 39708103
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| |||||||||||  | |||||  ||||||||||||||||||| |||||||||    
T  39708160 acccaagatatttaaaccgcataacttgaggtataatatgatctccaaatttcacctc 39708103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 48174672 - 48174729
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  48174672 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 48174729  T

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Target: scaffold0113 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 12177 - 12232
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacc 334  Q
    |||||| |||||||||||||  |||||  ||||| |||||||||||||||||||||    
T  12177 acccaagatatttaaaccatgtaacttggggtatgatatgatctccaactttcacc 12232  T

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Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 33495948 - 33495983
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctca 447  Q
    ||||||| ||||||||||||||||||||||||||||    
T  33495948 attcaagctggatggttgaaatggagaagagtctca 33495983  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 10100436 - 10100493
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  10100436 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 10100493  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 20428215 - 20428272
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| |||||||||||    ||||| |||||| |||||||||||||||||||||||    
T  20428215 acccaatatatttaaaccgcgtaacttgtggtatgatatgatctccaactttcacctc 20428272  T

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Target: scaffold0570 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 2849 - 2906
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  2849 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 2906  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 5895 - 5838
Alignment:
Q  279 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctc 336  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||||    
T  5895 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 5838  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 31219 - 31260
Alignment:
Q  412 attcaagttggatggttgaaatggagaagagtctcaagtgtt 453  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||    
T  31219 attcaagctgggtggttgaaatggagaagagcctcaagtgtt 31260  T

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