View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8903_high_7 (Length: 522)
Name: NF8903_high_7
Description: NF8903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8903_high_7 |
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Alignment Details
Target: chr6 (Bit Score: 452; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 32 - 507
Target Start/End: Original strand, 10306075 - 10306550
Alignment:
| Q |
32 |
atgacaccaatgttaatattgatgttaatgttgaaaatgaaaactttatcaagaagaatcaatgtcctgagaaaaagagtttctggggtgcagttagttt |
131 |
Q |
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| T |
10306075 |
atgacaccaatgttaatattgatgttaatgttgaaaatgaaaactttatcaagaagaatcaatgtcctgagaaaaagagtttctggggtgcagttagttt |
10306174 |
T |
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| Q |
132 |
gataattggtgcagcagttggccctggaatgttaggtttaccatcattgacaataaaatcaggaccattaccatcaacaatcataatcttgatttcatgg |
231 |
Q |
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| T |
10306175 |
gataattggtgcagcagttggtcctggaatgttaggtttaccatcattgacaataaaatcaggaccattaccatcaacaatcataatcttgatttcatgg |
10306274 |
T |
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| Q |
232 |
ctttatgtaatctcatcaataattcttgtagctgagctttgttttgatgcaatggaaaatgataatgttgatgaggttagtttcacaaaccttgcaacaa |
331 |
Q |
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| T |
10306275 |
ctttatgtaatctcatcaataattcttgtagctgagctttgttttgatgcaatggaaaatgataatgttgatgaggttagtttcacaaaccttgcaacaa |
10306374 |
T |
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| Q |
332 |
gaacattaggtcaaaaatttggttcatttgttgcattggtttatacaagtttatgtttttcattgcttgttgcatgtgttgctggaattggatcaatttt |
431 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
10306375 |
gaacattaggtcaaaaatttggttcatttgttgcattggtttatacaagtttatgtttttcattgcttgttgcatgtgttgctggtattggatcaatttt |
10306474 |
T |
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| Q |
432 |
ggcaccagtttttccaagattgagtagtttggttcttcattcattgtttccatttgttgttggaacattgattgtg |
507 |
Q |
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| T |
10306475 |
agcaccaatttttccaaaattcagtagtttggttcttcattcattgtttccatttgttgttggaacattgattgtg |
10306550 |
T |
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