View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8903_low_118 (Length: 207)

Name: NF8903_low_118
Description: NF8903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8903_low_118
NF8903_low_118
[»] chr3 (41 HSPs)
chr3 (103-195)||(6500266-6500358)
chr3 (103-195)||(9993202-9993295)
chr3 (103-193)||(16390828-16390916)
chr3 (103-193)||(23758172-23758262)
chr3 (103-180)||(12248713-12248790)
chr3 (103-193)||(37867320-37867411)
chr3 (103-193)||(10654548-10654638)
chr3 (103-193)||(14466464-14466555)
chr3 (103-193)||(20683051-20683142)
chr3 (103-193)||(28324102-28324193)
chr3 (103-193)||(38195616-38195707)
chr3 (103-193)||(6219972-6220061)
chr3 (103-193)||(19779260-19779352)
chr3 (103-193)||(13122535-13122626)
chr3 (103-193)||(39372945-39373036)
chr3 (103-193)||(5511568-5511660)
chr3 (103-193)||(5627270-5627362)
chr3 (103-193)||(20721986-20722078)
chr3 (103-193)||(4744611-4744704)
chr3 (103-193)||(5546875-5546968)
chr3 (103-169)||(8775592-8775658)
chr3 (103-169)||(13382531-13382596)
chr3 (103-169)||(13393125-13393190)
chr3 (103-169)||(18484961-18485027)
chr3 (103-193)||(5875548-5875640)
chr3 (103-169)||(16477176-16477243)
chr3 (103-193)||(24660791-24660884)
chr3 (103-193)||(12296071-12296163)
chr3 (103-193)||(41684551-41684643)
chr3 (1-37)||(12248612-12248648)
chr3 (103-162)||(7803763-7803821)
chr3 (103-162)||(17909260-17909318)
chr3 (103-156)||(18140858-18140910)
chr3 (103-143)||(22141537-22141577)
chr3 (103-138)||(13120761-13120796)
chr3 (103-141)||(15834285-15834323)
chr3 (103-156)||(4405260-4405313)
chr3 (103-156)||(12962430-12962482)
chr3 (5-41)||(28323989-28324025)
chr3 (5-41)||(38195784-38195820)
chr3 (5-41)||(39373113-39373149)
[»] chr7 (38 HSPs)
chr7 (103-193)||(21002357-21002446)
chr7 (103-193)||(5711146-5711235)
chr7 (103-193)||(19993361-19993449)
chr7 (103-193)||(5686406-5686495)
chr7 (103-193)||(6877210-6877299)
chr7 (103-193)||(4212869-4212960)
chr7 (103-193)||(8618243-8618334)
chr7 (103-193)||(11006059-11006150)
chr7 (103-193)||(17960076-17960167)
chr7 (103-193)||(22090023-22090114)
chr7 (103-193)||(167740-167831)
chr7 (103-193)||(466932-467023)
chr7 (103-193)||(2715561-2715651)
chr7 (103-168)||(9434136-9434200)
chr7 (103-193)||(11096912-11097004)
chr7 (103-193)||(24735629-24735721)
chr7 (103-193)||(26400054-26400146)
chr7 (103-193)||(1988433-1988524)
chr7 (103-169)||(42866746-42866812)
chr7 (103-163)||(8012059-8012119)
chr7 (103-193)||(26699047-26699139)
chr7 (143-193)||(9434085-9434135)
chr7 (103-156)||(332424-332477)
chr7 (103-154)||(9086170-9086222)
chr7 (103-154)||(40052019-40052071)
chr7 (103-162)||(15887591-15887649)
chr7 (103-156)||(9160669-9160722)
chr7 (103-156)||(12173656-12173708)
chr7 (103-156)||(21696125-21696177)
chr7 (103-156)||(22577352-22577404)
chr7 (1-37)||(466823-466859)
chr7 (103-141)||(4822220-4822258)
chr7 (104-154)||(13137260-13137309)
chr7 (103-141)||(13259958-13259996)
chr7 (103-156)||(13031417-13031469)
chr7 (5-41)||(1988599-1988635)
chr7 (5-41)||(11006227-11006263)
chr7 (5-41)||(42866889-42866925)
[»] chr6 (38 HSPs)
chr6 (103-193)||(25788541-25788630)
chr6 (103-182)||(7669690-7669769)
chr6 (103-190)||(9122411-9122497)
chr6 (103-193)||(25590043-25590133)
chr6 (103-193)||(32971829-32971920)
chr6 (103-193)||(34817074-34817165)
chr6 (103-193)||(27463977-27464066)
chr6 (103-193)||(12726730-12726821)
chr6 (103-193)||(27342593-27342684)
chr6 (103-193)||(27403333-27403424)
chr6 (103-193)||(12855804-12855892)
chr6 (103-193)||(27373625-27373713)
chr6 (103-193)||(17981801-17981893)
chr6 (103-193)||(17983990-17984082)
chr6 (103-193)||(26865611-26865703)
chr6 (103-166)||(4631749-4631812)
chr6 (103-166)||(27385275-27385338)
chr6 (103-166)||(27475688-27475751)
chr6 (103-193)||(3662205-3662298)
chr6 (103-193)||(16931256-16931348)
chr6 (103-193)||(26026282-26026374)
chr6 (103-193)||(32310965-32311057)
chr6 (103-156)||(21625878-21625930)
chr6 (103-162)||(20059756-20059814)
chr6 (103-156)||(19483558-19483610)
chr6 (103-156)||(20112028-20112080)
chr6 (103-162)||(12359005-12359063)
chr6 (103-154)||(22802899-22802949)
chr6 (132-193)||(27342518-27342580)
chr6 (132-193)||(27403258-27403320)
chr6 (103-156)||(13602932-13602984)
chr6 (103-156)||(17782020-17782072)
chr6 (103-156)||(19461224-19461276)
chr6 (103-156)||(25794778-25794831)
chr6 (5-41)||(4631889-4631925)
chr6 (5-41)||(27385415-27385451)
chr6 (5-41)||(27475828-27475864)
chr6 (5-41)||(32310852-32310888)
[»] chr5 (40 HSPs)
chr5 (103-193)||(5291359-5291448)
chr5 (103-193)||(27604198-27604287)
chr5 (103-193)||(40400411-40400500)
chr5 (103-193)||(31447904-31447993)
chr5 (103-193)||(39361706-39361795)
chr5 (103-193)||(15994108-15994198)
chr5 (103-193)||(22156495-22156586)
chr5 (103-193)||(6985687-6985779)
chr5 (103-193)||(14039986-14040078)
chr5 (103-193)||(14558838-14558930)
chr5 (103-193)||(22685392-22685484)
chr5 (103-193)||(23371901-23371993)
chr5 (103-193)||(27043008-27043100)
chr5 (103-193)||(27469950-27470042)
chr5 (103-193)||(31843348-31843440)
chr5 (103-193)||(36583319-36583411)
chr5 (103-193)||(39491710-39491802)
chr5 (103-193)||(14447813-14447904)
chr5 (103-169)||(35225461-35225527)
chr5 (103-193)||(17617067-17617159)
chr5 (103-193)||(17728924-17729016)
chr5 (103-193)||(31358541-31358633)
chr5 (103-193)||(36697619-36697711)
chr5 (103-169)||(23706746-23706813)
chr5 (103-193)||(9345932-9346025)
chr5 (103-193)||(23306235-23306327)
chr5 (103-193)||(24817664-24817756)
chr5 (103-156)||(23405793-23405846)
chr5 (103-154)||(24588914-24588966)
chr5 (103-154)||(30228305-30228357)
chr5 (103-154)||(42052760-42052812)
chr5 (103-162)||(20561662-20561720)
chr5 (103-155)||(1110019-1110070)
chr5 (103-162)||(24927007-24927065)
chr5 (103-156)||(21660967-21661021)
chr5 (103-156)||(13523973-13524025)
chr5 (103-156)||(17447565-17447618)
chr5 (103-156)||(19477302-19477355)
chr5 (5-41)||(35225350-35225386)
chr5 (5-41)||(36697505-36697541)
[»] chr2 (24 HSPs)
chr2 (103-193)||(9907452-9907542)
chr2 (103-193)||(24337695-24337784)
chr2 (103-193)||(43083500-43083589)
chr2 (103-193)||(29245074-29245164)
chr2 (103-193)||(4210738-4210829)
chr2 (103-193)||(22959622-22959713)
chr2 (103-193)||(27222247-27222338)
chr2 (103-193)||(35253859-35253950)
chr2 (103-193)||(35264468-35264559)
chr2 (103-193)||(9772595-9772686)
chr2 (103-193)||(34803650-34803739)
chr2 (103-193)||(40223182-40223270)
chr2 (103-193)||(43346254-43346347)
chr2 (103-193)||(11404759-11404851)
chr2 (103-193)||(10267841-10267933)
chr2 (103-193)||(10278418-10278510)
chr2 (103-156)||(28731150-28731203)
chr2 (1-37)||(9907343-9907379)
chr2 (104-141)||(18937334-18937371)
chr2 (103-156)||(19312220-19312272)
chr2 (103-156)||(22318385-22318437)
chr2 (5-41)||(27222415-27222451)
chr2 (5-41)||(35254027-35254063)
chr2 (5-41)||(35264636-35264672)
[»] chr1 (29 HSPs)
chr1 (103-193)||(5649689-5649778)
chr1 (103-193)||(4168061-4168150)
chr1 (103-193)||(21864463-21864554)
chr1 (103-193)||(12731349-12731440)
chr1 (103-193)||(12741942-12742033)
chr1 (103-193)||(7508138-7508230)
chr1 (103-193)||(12623095-12623186)
chr1 (103-193)||(19179766-19179858)
chr1 (103-193)||(35400444-35400535)
chr1 (103-193)||(35647970-35648061)
chr1 (103-193)||(3172424-3172516)
chr1 (103-193)||(51655742-51655834)
chr1 (103-169)||(5834081-5834147)
chr1 (103-169)||(47617817-47617883)
chr1 (103-163)||(38095910-38095971)
chr1 (103-155)||(153551-153602)
chr1 (103-154)||(36246300-36246352)
chr1 (5-41)||(3172595-3172631)
chr1 (103-162)||(7680120-7680178)
chr1 (103-141)||(20953706-20953744)
chr1 (103-141)||(36134918-36134956)
chr1 (103-156)||(20883118-20883170)
chr1 (103-156)||(22643685-22643737)
chr1 (103-156)||(23067736-23067788)
chr1 (5-41)||(5834222-5834258)
chr1 (104-156)||(21134413-21134464)
chr1 (5-41)||(35400331-35400367)
chr1 (5-41)||(35647856-35647892)
chr1 (5-41)||(47617704-47617740)
[»] chr8 (31 HSPs)
chr8 (103-193)||(26112119-26112209)
chr8 (103-193)||(6151939-6152030)
chr8 (103-193)||(19129619-19129709)
chr8 (103-193)||(242707-242799)
chr8 (103-193)||(796077-796169)
chr8 (103-193)||(3358506-3358598)
chr8 (103-193)||(36078820-36078911)
chr8 (103-169)||(13687900-13687966)
chr8 (103-193)||(32087573-32087666)
chr8 (103-193)||(9342029-9342121)
chr8 (103-193)||(36293786-36293878)
chr8 (103-193)||(15780012-15780102)
chr8 (103-193)||(15790601-15790691)
chr8 (103-169)||(44482014-44482081)
chr8 (103-193)||(209457-209550)
chr8 (103-193)||(723080-723173)
chr8 (103-156)||(19419317-19419370)
chr8 (103-154)||(29077644-29077696)
chr8 (103-162)||(19225845-19225903)
chr8 (103-156)||(3597689-3597741)
chr8 (103-156)||(17518374-17518426)
chr8 (103-156)||(20381711-20381763)
chr8 (103-156)||(23468694-23468747)
chr8 (103-155)||(30324562-30324613)
chr8 (103-141)||(21289155-21289193)
chr8 (103-156)||(19927818-19927870)
chr8 (103-140)||(24647082-24647119)
chr8 (110-154)||(29087895-29087940)
chr8 (5-41)||(13687786-13687822)
chr8 (5-41)||(36078986-36079022)
chr8 (5-41)||(44482158-44482194)
[»] scaffold0105 (2 HSPs)
scaffold0105 (103-193)||(46882-46973)
scaffold0105 (5-41)||(46769-46805)
[»] chr4 (21 HSPs)
chr4 (103-193)||(16256762-16256853)
chr4 (103-193)||(24641175-24641266)
chr4 (103-169)||(451495-451561)
chr4 (107-193)||(19954286-19954371)
chr4 (103-169)||(30936346-30936412)
chr4 (103-180)||(40469865-40469941)
chr4 (103-169)||(21997337-21997403)
chr4 (103-193)||(17918945-17919031)
chr4 (103-166)||(18762368-18762431)
chr4 (104-193)||(24027366-24027451)
chr4 (103-169)||(27657532-27657598)
chr4 (103-193)||(55755129-55755221)
chr4 (103-193)||(10750423-10750516)
chr4 (103-193)||(10964192-10964285)
chr4 (103-193)||(36019228-36019320)
chr4 (5-41)||(18762255-18762291)
chr4 (5-41)||(27657676-27657712)
chr4 (103-141)||(15474465-15474503)
chr4 (103-156)||(13004181-13004233)
chr4 (103-156)||(16818578-16818630)
chr4 (5-41)||(24641343-24641379)
[»] scaffold0906 (2 HSPs)
scaffold0906 (103-174)||(3816-3887)
scaffold0906 (1-41)||(3714-3754)
[»] scaffold0133 (1 HSPs)
scaffold0133 (103-193)||(31987-32079)
[»] scaffold0199 (1 HSPs)
scaffold0199 (103-154)||(23526-23577)
[»] scaffold0022 (1 HSPs)
scaffold0022 (103-155)||(52801-52852)
[»] scaffold1260 (1 HSPs)
scaffold1260 (103-156)||(2096-2148)
[»] scaffold1002 (1 HSPs)
scaffold1002 (103-156)||(3183-3235)
[»] scaffold0414 (1 HSPs)
scaffold0414 (103-156)||(6413-6465)
[»] scaffold0315 (1 HSPs)
scaffold0315 (103-156)||(18692-18744)
[»] scaffold0269 (1 HSPs)
scaffold0269 (103-156)||(8092-8145)
[»] scaffold0203 (1 HSPs)
scaffold0203 (103-156)||(23399-23451)
[»] scaffold0056 (1 HSPs)
scaffold0056 (103-156)||(34088-34140)
[»] scaffold0011 (1 HSPs)
scaffold0011 (103-156)||(134670-134722)
[»] scaffold0004 (1 HSPs)
scaffold0004 (103-156)||(30153-30205)
[»] scaffold1216 (1 HSPs)
scaffold1216 (103-138)||(7-42)
[»] scaffold0426 (1 HSPs)
scaffold0426 (105-156)||(14390-14440)
[»] scaffold0435 (1 HSPs)
scaffold0435 (103-141)||(4601-4639)
[»] scaffold0752 (1 HSPs)
scaffold0752 (103-156)||(2801-2853)
[»] scaffold0547 (1 HSPs)
scaffold0547 (103-156)||(1667-1719)
[»] scaffold0387 (1 HSPs)
scaffold0387 (103-156)||(8175-8227)
[»] scaffold0382 (1 HSPs)
scaffold0382 (103-156)||(10552-10604)
[»] scaffold0297 (1 HSPs)
scaffold0297 (103-156)||(17767-17819)
[»] scaffold0185 (1 HSPs)
scaffold0185 (103-156)||(10094-10146)
[»] scaffold0173 (1 HSPs)
scaffold0173 (103-156)||(24640-24692)
[»] scaffold0080 (1 HSPs)
scaffold0080 (103-156)||(91-143)
[»] scaffold0073 (1 HSPs)
scaffold0073 (103-156)||(59254-59306)
[»] scaffold0066 (1 HSPs)
scaffold0066 (107-156)||(60170-60218)
[»] scaffold0454 (1 HSPs)
scaffold0454 (5-41)||(2297-2333)
[»] scaffold0411 (2 HSPs)
scaffold0411 (103-159)||(2383-2438)
scaffold0411 (103-159)||(6414-6469)


Alignment Details
Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 6500266 - 6500358
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgatgt 195  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6500266 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataaccacttcaaaacctttttaaatacttctgatgt 6500358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 9993202 - 9993295
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacc-tttttaaatacttctgatgt 195  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  9993202 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataacctcttcaaaaccatttttaaatacttctgatgt 9993295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 16390828 - 16390916
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16390828 gttgatgacaaaagggggagtaaatgtatagtattc-taaggcactgagccccactataaccacttcaaaa-ctttttaaatacttctgat 16390916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 23758262 - 23758172
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    |||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  23758262 gttgatcacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataaccacttctaaatcttttttaatacttctgat 23758172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 12248713 - 12248790
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaaccttttt 180  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  12248713 gttgatgacaaaagggggagtaaatgtataatatttttaaggcactgagccccactataaccacttcaaaaccttttt 12248790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 37867411 - 37867320
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  | |||||||||||||||||    
T  37867411 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataaccacttctaaatttcttttaaatacttctgat 37867320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 10654548 - 10654638
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttat-aaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||| ||||||||||||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10654548 gttgatgacaaaagggagagtaaatgtatagtattttttaatgcactgagccccactataaccacttcaaaacc-ttttaaatacttctgat 10654638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 14466555 - 14466464
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  14466555 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 14466464  T

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Target: chr3; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 20683051 - 20683142
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  20683051 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 20683142  T

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Target: chr3; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 28324102 - 28324193
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  28324102 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 28324193  T

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Target: chr3; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 38195707 - 38195616
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  38195707 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 38195616  T

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Target: chr3; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 6219972 - 6220061
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| | |||| ||||||||||||| ||||    
T  6219972 gttgatgacaaaagggggagtaaatgtatagcattt-taaggcactgagccccactataaccactcctaaacttttttaaatacttatgat 6220061  T

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Target: chr3; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 19779352 - 19779260
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttat-aaggcactgagccccactataaccacttcaaaac-ctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||| ||||||||| | ||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  19779352 gttgatgacaaaagggggagtaaatggatagtattttttaaggcactgagccccactataaccacttctaaactttttttaaatacttctgat 19779260  T

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Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 13122626 - 13122535
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | ||||||| |||||||||    
T  13122626 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaagacttctgat 13122535  T

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Target: chr3; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 39373036 - 39372945
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||| || |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  39373036 gttgatgacaaaagggggagtaaatgtatagtaattttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 39372945  T

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Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 5511660 - 5511568
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  5511660 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 5511568  T

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Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 5627270 - 5627362
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  5627270 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 5627362  T

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Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 20722078 - 20721986
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  20722078 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 20721986  T

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Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 4744704 - 4744611
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta--tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  4744704 gttgatgacaaaagggggagtaaatgtatagtatttttttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 4744611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 5546875 - 5546968
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta--tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  5546875 gttgatgacaaaagggggagtaaatgtatagtatttttttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 5546968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 8775658 - 8775592
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  8775658 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataacaacttc 8775592  T

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Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 13382531 - 13382596
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  13382531 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccctactataaccacttc 13382596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 13393125 - 13393190
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  13393125 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccctactataaccacttc 13393190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 18485027 - 18484961
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  18485027 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataacaacttc 18484961  T

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Target: chr3; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 5875548 - 5875640
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||  ||||||||||||| |||  | |||||||||||||||||    
T  5875548 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctgctataaccacttctaaatttcttttaaatacttctgat 5875640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 16477243 - 16477176
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  16477243 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttc 16477176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 24660884 - 24660791
Alignment:
Q  103 gttgatgacaagagggggagtaaa-tgtatagtatttat-aaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||| |||||||||||| | |||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  24660884 gttgatgacaaaagggggagtaaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 24660791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 12296071 - 12296163
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||| || ||||||||| |||| |||  | |||||||||||||||||    
T  12296071 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagtcctactataacctcttctaaatttcttttaaatacttctgat 12296163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 41684643 - 41684551
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||| ||||||||||||||||||  |||||||||||| || ||||||||| |||| |||  | |||||||||||||||||    
T  41684643 gttgatgacaaaaggggaagtaaatgtatagtatttgttaaggcactgagtcctactataacctcttctaaatttcttttaaatacttctgat 41684551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12248612 - 12248648
Alignment:
Q  1 tctgatgatatttattgtttttaatgtcttatgctct 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  12248612 tctgatgatatttattgtttttaatgtcttatgctct 12248648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 7803763 - 7803821
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataa 162  Q
    ||||||||||| |||||||||| ||||||||||||| |||||| |||||||||| |||||    
T  7803763 gttgatgacaaaagggggagtagatgtatagtattt-taaggctctgagccccattataa 7803821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 17909260 - 17909318
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataa 162  Q
    ||||||||||| |||||||||| ||||||||||||| |||||| |||||||||| |||||    
T  17909260 gttgatgacaaaagggggagtagatgtatagtattt-taaggctctgagccccattataa 17909318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 18140858 - 18140910
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  18140858 gttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 18140910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 22141577 - 22141537
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataag 143  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  22141577 gttgatgacaaaagggggagtagatgtatagtatttataag 22141537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 13120796 - 13120761
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt 138  Q
    ||||||||||| ||||||||||||||||||||||||    
T  13120796 gttgatgacaaaagggggagtaaatgtatagtattt 13120761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 15834323 - 15834285
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttata 141  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  15834323 gttgatgacaaaagggggagtagatgtatagtatttata 15834285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 4405313 - 4405260
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||  |||||||||||| | |||| ||||||||||    
T  4405313 gttgatgacaaaagggggagtagttgtatagtattttttaggctctgagcccca 4405260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 12962430 - 12962482
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    |||||||| || |||||||||| ||||||||||||||| |||| ||||||||||    
T  12962430 gttgatgataaaagggggagtagatgtatagtatttat-aggctctgagcccca 12962482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 28323989 - 28324025
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  28323989 atgatatttattgattttaatgtcatatgctctgata 28324025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 38195820 - 38195784
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  38195820 atgatatttattgattttaatgtcatatgctctgata 38195784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 39373149 - 39373113
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  39373149 atgatatttattgattttaatgtcatatgctctgata 39373113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 4e-37; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 21002357 - 21002446
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21002357 gttgatgacaaaagggggagtaaatgtatagtattta-aaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 21002446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 5711235 - 5711146
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5711235 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaacttttttaaatacttctgat 5711146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 19993361 - 19993449
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19993361 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttcaaaa-ctttttaaatacttctgat 19993449  T

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Target: chr7; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 5686495 - 5686406
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  5686495 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcaccgagccccactataaccacttctaaacttttttaaatacttctgat 5686406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 6877210 - 6877299
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  6877210 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaacttttttaaatacttatgat 6877299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 4212960 - 4212869
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  | |||||||||||||||||    
T  4212960 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataaccacttctaaatttcttttaaatacttctgat 4212869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 8618334 - 8618243
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  8618334 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 8618243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 11006150 - 11006059
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  11006150 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 11006059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 17960076 - 17960167
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  17960076 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 17960167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 22090114 - 22090023
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  | |||||||||||||||||    
T  22090114 gttgacgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataaccacttctaaatttcttttaaatacttctgat 22090023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 167831 - 167740
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  167831 gttgatgacaaaagggggagtaaatgtatagtatttttaaagcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 167740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 466932 - 467023
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttat-aaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| |||  ||||| ||||||||||||    
T  466932 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccccgctataaccacttctaaattttttttaatacttctgat 467023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 2715561 - 2715651
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||  ||||| ||||| ||||||    
T  2715561 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataacctcttctaaaatttttttaatacctctgat 2715651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 9434200 - 9434136
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccactt 168  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9434200 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccactt 9434136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 11097004 - 11096912
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  11097004 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 11096912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 24735721 - 24735629
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  24735721 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 24735629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 26400054 - 26400146
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  26400054 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 26400146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 1988524 - 1988433
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| | |  | |||||||||||||||||    
T  1988524 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataacaacttctacatttcttttaaatacttctgat 1988433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 42866812 - 42866746
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  42866812 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataacaacttc 42866746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 8012059 - 8012119
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataac 163  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  8012059 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataac 8012119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 26699047 - 26699139
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||||| |||  | |||||||||||||||||    
T  26699047 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccctactacaaccacttctaaatttcttttaaatacttctgat 26699139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 9434135 - 9434085
Alignment:
Q  143 ggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  9434135 ggcactgagccccactataaccacttctaaacttttttaaatacttctgat 9434085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 332477 - 332424
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  332477 gttgatgacaaaagggggagtagatgtatagtatttataaggctctgagcccca 332424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 9086222 - 9086170
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccc 154  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  9086222 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccc 9086170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 40052019 - 40052071
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccc 154  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  40052019 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccc 40052071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 15887591 - 15887649
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataa 162  Q
    ||||||||||| |||||||||| ||||||||||||| |||||| |||||||||| |||||    
T  15887591 gttgatgacaaaagggggagtagatgtatagtattt-taaggctctgagccccattataa 15887649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 9160722 - 9160669
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| |||||||||||||  ||||| ||||||||||    
T  9160722 gttgatgacaaaagggggagtagatgtatagtattttcaaggctctgagcccca 9160669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 12173656 - 12173708
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  12173656 gttgatgacaatagggggagtagatgtatagtatttat-aggctctgagcccca 12173708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 21696177 - 21696125
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  21696177 gttgatgacaaaagggggagtatatgtatagtatttat-aggctctgagcccca 21696125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 22577352 - 22577404
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  22577352 gttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 22577404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 466823 - 466859
Alignment:
Q  1 tctgatgatatttattgtttttaatgtcttatgctct 37  Q
    |||||| ||||||||||||||||||||||||||||||    
T  466823 tctgataatatttattgtttttaatgtcttatgctct 466859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 4822258 - 4822220
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttata 141  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  4822258 gttgatgacaaaagggggagtagatgtatagtatttata 4822220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 13137260 - 13137309
Alignment:
Q  104 ttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccc 154  Q
    |||||||||| |||||||||| ||||||||||||||| |||| ||||||||    
T  13137260 ttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagccc 13137309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 13259958 - 13259996
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttata 141  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  13259958 gttgatgacaaaagggggagtagatgtatagtatttata 13259996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 13031417 - 13031469
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| || ||||||| ||||||||||||||| |||| ||||||||||    
T  13031417 gttgatgacaaaagagggagtagatgtatagtatttat-aggctctgagcccca 13031469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 1988635 - 1988599
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  1988635 atgatatttattgattttaatgtcatatgctctgata 1988599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 11006263 - 11006227
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  11006263 atgatatttattgattttaatgtcatatgctctgata 11006227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 42866925 - 42866889
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  42866925 atgatatttattgattttaatgtcatatgctctgata 42866889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 2e-32; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 25788630 - 25788541
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  25788630 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaacttttttaaatacttctgat 25788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 182
Target Start/End: Original strand, 7669690 - 7669769
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaa 182  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  7669690 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataaccacttctaaacttttttaa 7669769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 9122411 - 9122497
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttct 190  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| |||||||||||||||    
T  9122411 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagcccaactataaccacttctaaacttttttaaatacttct 9122497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 25590133 - 25590043
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttat-aaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  25590133 gttgatgacaaaagggggagtaaatggatagtattttttaaggcactgagccccactataaccacttcaaaagc-ttttaaatacttctgat 25590043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 32971829 - 32971920
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||| |||| |||| | |||||||||||||||||    
T  32971829 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaacctcttctaaacttcttttaaatacttctgat 32971920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 34817074 - 34817165
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  34817074 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 34817165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 27464066 - 27463977
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| || ||||||||||||||||||||| ||| ||||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  27464066 gttgatgacaaaagagggagtaaatgtatagtattt-taatgcactgagccccattataaccatttcaaaaactttttaaatacttctgat 27463977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 12726730 - 12726821
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||  |  ||||||||||||||||    
T  12726730 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataaccacttctaaatttcctttaaatacttctgat 12726821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 27342684 - 27342593
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| |||| | |||||||||| ||||||    
T  27342684 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataacaacttctaaacttcttttaaatacctctgat 27342593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 27403424 - 27403333
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| |||| | |||||||||| ||||||    
T  27403424 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataacaacttctaaacttcttttaaatacctctgat 27403333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 12855892 - 12855804
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||  ||||| ||||||||||||    
T  12855892 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccctactataaccacttctaaa-tttttttaatacttctgat 12855804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 27373713 - 27373625
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| || ||||||||||||||||||||| ||| ||||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  27373713 gttgatgacaaaagagggagtaaatgtatagtattt-taatgcactgagccccattataaccatttcaaaa-ctttttaaatacttctgat 27373625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 17981801 - 17981893
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  17981801 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 17981893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 17983990 - 17984082
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  17983990 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 17984082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 26865703 - 26865611
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  26865703 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 26865611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 4631812 - 4631749
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccac 166  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  4631812 gttgatgacaaaagggggagtaaatgtatagtatttttaagacactgagccccactataaccac 4631749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 27385338 - 27385275
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccac 166  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  27385338 gttgatgacaaaagggggagtaaatgtatagtatttttaagacactgagccccactataaccac 27385275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 27475751 - 27475688
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccac 166  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  27475751 gttgatgacaaaagggggagtaaatgtatagtatttttaagacactgagccccactataaccac 27475688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 3662298 - 3662205
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta--tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  3662298 gttgatgacaaaagggggagtaaatgtatagtatttttttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 3662205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 16931348 - 16931256
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | | |||||||||||||||    
T  16931348 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttctcttaaatacttctgat 16931256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 26026374 - 26026282
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||| |||| |||  | |||||||||||||||||    
T  26026374 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataacctcttctaaatttcttttaaatacttctgat 26026282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 32310965 - 32311057
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||| ||||||    
T  32310965 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacctctgat 32311057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 21625930 - 21625878
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  21625930 gttgatgacaaaagggggagtaaatgtatagtatttat-aggcactgagtccca 21625878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 20059756 - 20059814
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataa 162  Q
    ||||||||||| |||||||||| ||||||||||||| |||||| |||||||||| |||||    
T  20059756 gttgatgacaaaagggggagtagatgtatagtattt-taaggctctgagccccattataa 20059814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 19483610 - 19483558
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||    
T  19483610 gttgatgacaaaagggggagtaaatgtatagtattta-aaggctctgagtccca 19483558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 20112028 - 20112080
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  20112028 gttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 20112080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 12359063 - 12359005
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataa 162  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||  ||||||||| |||||    
T  12359063 gttgatgacaaaagggggagtagatgtatagtattt-taaggctttgagccccattataa 12359005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 22802949 - 22802899
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccc 154  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||    
T  22802949 gttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagccc 22802899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 27342580 - 27342518
Alignment:
Q  132 agtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||| ||||||||||||||| |||||||| ||||| |||| | |||||||||| ||||||    
T  27342580 agtatttttaaggcactgagccctactataacaacttctaaacttcttttaaatacctctgat 27342518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 27403320 - 27403258
Alignment:
Q  132 agtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||| ||||||||||||||| |||||||| ||||| |||| | |||||||||| ||||||    
T  27403320 agtatttttaaggcactgagccctactataacaacttctaaacttcttttaaatacctctgat 27403258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 13602984 - 13602932
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| | |||||||| ||||||||||||||| |||| ||||||||||    
T  13602984 gttgatgacaaaaaggggagtagatgtatagtatttat-aggctctgagcccca 13602932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 17782072 - 17782020
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||| |||||||||||| | |||| ||||||||||    
T  17782072 gttgatgacaaaagggggagtaagtgtatagtattt-ttaggctctgagcccca 17782020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 19461224 - 19461276
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||| |||||||||||||||| | |||| ||||||||||    
T  19461224 gttgatgacaaaagggggactaaatgtatagtattt-ttaggctctgagcccca 19461276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 25794831 - 25794778
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||  ||||| |||||| |||||| ||||||||||    
T  25794831 gttgatgacaaaagggggagtagttgtatggtatttttaaggctctgagcccca 25794778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 4631925 - 4631889
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  4631925 atgatatttattgattttaatgtcatatgctctgata 4631889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 27385451 - 27385415
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  27385451 atgatatttattgattttaatgtcatatgctctgata 27385415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 27475864 - 27475828
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  27475864 atgatatttattgattttaatgtcatatgctctgata 27475828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 32310852 - 32310888
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  32310852 atgatatttattgattttaatgtcatatgctctgata 32310888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 2e-32; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 5291448 - 5291359
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5291448 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaacttttttaaatacttctgat 5291359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 27604287 - 27604198
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  27604287 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaacttttttaaatacttctgat 27604198  T

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Target: chr5; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 40400411 - 40400500
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  40400411 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaacttttttaaatacttctgat 40400500  T

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Target: chr5; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 31447904 - 31447993
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  31447904 gttgatgacaaaagggggagtaaatgtatagtattc-taaggcactgagccccactataaccacttcaaaactttttaaaatacttctgat 31447993  T

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Target: chr5; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 39361706 - 39361795
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  39361706 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccattataaccacttctaaacttttttaaatacttctgat 39361795  T

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Target: chr5; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 15994198 - 15994108
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||   ||||||||||||||||||    
T  15994198 gttgatgacaaaagcgggagtaaatgtatagtatttttaaggcactgagccccactataaccacttctaattttttttaaatacttctgat 15994108  T

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Target: chr5; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 22156495 - 22156586
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  22156495 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 22156586  T

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Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 6985687 - 6985779
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  6985687 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 6985779  T

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Target: chr5; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 14039986 - 14040078
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  14039986 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 14040078  T

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Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 14558930 - 14558838
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattta-taaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  14558930 gttgatgacaaaagggggagtaaatgtatagtatttatttaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 14558838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 22685392 - 22685484
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  22685392 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 22685484  T

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Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 23371901 - 23371993
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  23371901 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 23371993  T

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Target: chr5; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 27043100 - 27043008
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  27043100 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 27043008  T

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Target: chr5; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 27469950 - 27470042
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  27469950 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 27470042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 31843348 - 31843440
Alignment:
Q  103 gttgatgacaagagggggagtaaa-tgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||| |||  | |||||||||||||||||    
T  31843348 gttgatgacaaaagggggagtaaaatgtatagtatttttaaggcactgagccccactataacctcttctaaatttcttttaaatacttctgat 31843440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 36583411 - 36583319
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  36583411 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 36583319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 39491802 - 39491710
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  39491802 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 39491710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 14447904 - 14447813
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| |||  |  ||||||||||||||||    
T  14447904 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataaccaattctaaatttcctttaaatacttctgat 14447813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 35225461 - 35225527
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  35225461 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataacaacttc 35225527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 17617067 - 17617159
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||| ||||||    
T  17617067 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacctctgat 17617159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 17728924 - 17729016
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||| ||||||    
T  17728924 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacctctgat 17729016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 31358541 - 31358633
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||| ||||||    
T  31358541 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacctctgat 31358633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 36697619 - 36697711
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||| ||||||    
T  36697619 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacctctgat 36697711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 23706746 - 23706813
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  23706746 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttc 23706813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 9345932 - 9346025
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta--tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||| ||||||||||||||||  ||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  9345932 gttgatgacaaaagggagagtaaatgtatagtatttttttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 9346025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 23306235 - 23306327
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||| || ||||||||| |||| |||  | |||||||||||||||||    
T  23306235 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagtcctactataacctcttctaaatttcttttaaatacttctgat 23306327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 24817756 - 24817664
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||| || ||||||||| |||| |||  | |||||||||||||||||    
T  24817756 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagtcctactataacctcttctaaatttcttttaaatacttctgat 24817664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 23405793 - 23405846
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||| |||||| ||||||||||    
T  23405793 gttgatgacaaaagggggagtagatgtatagtatttttaaggctctgagcccca 23405846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 24588966 - 24588914
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccc 154  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  24588966 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccc 24588914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 30228357 - 30228305
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccc 154  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  30228357 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccc 30228305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 42052760 - 42052812
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccc 154  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  42052760 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccc 42052812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 20561662 - 20561720
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataa 162  Q
    ||||||||||| |||||||||| ||||||||||||| |||||| |||||||||| |||||    
T  20561662 gttgatgacaaaagggggagtagatgtatagtattt-taaggctctgagccccattataa 20561720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 1110070 - 1110019
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccc 155  Q
    ||||||||||| |||||||||| ||||||||||||| |||||| |||||||||    
T  1110070 gttgatgacaaaagggggagtagatgtatagtattt-taaggctctgagcccc 1110019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 24927065 - 24927007
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataa 162  Q
    ||||||||||| |||||||||| ||||||||||||| |||||| || ||||||| |||||    
T  24927065 gttgatgacaaaagggggagtagatgtatagtattt-taaggctctaagccccattataa 24927007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 21661021 - 21660967
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttata-aggcactgagcccca 156  Q
    ||||||||||| |||| ||||| |||||||||||||||| | |||||||||||||    
T  21661021 gttgatgacaaaagggagagtagatgtatagtatttatataagcactgagcccca 21660967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 13524025 - 13523973
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||| |||||||||||| | |||| ||||||||||    
T  13524025 gttgatgacaaaagggggagtaattgtatagtattt-ttaggctctgagcccca 13523973  T

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Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 17447618 - 17447565
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||  |||||||||||| | |||| ||||||||||    
T  17447618 gttgatgacaaaagggggagtagttgtatagtattttttaggctctgagcccca 17447565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 19477302 - 19477355
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||| |  |||||||||||| |||||| ||||||||||    
T  19477302 gttgatgacaaaagggggagaagttgtatagtatttttaaggctctgagcccca 19477355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 35225350 - 35225386
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  35225350 atgatatttattgattttaatgtcatatgctctgata 35225386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 36697505 - 36697541
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  36697505 atgatatttattgattttaatgtcatatgctctgata 36697541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 2e-32; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 9907452 - 9907542
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  9907452 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataaccacttctaaatttttttaaatacttctgat 9907542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 24337695 - 24337784
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  24337695 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaacttttttaaatacttctgat 24337784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 43083589 - 43083500
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  43083589 gttgatgacaaaagggagagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaacttttttaaatacttctgat 43083500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 29245164 - 29245074
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaac-ctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  29245164 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaactttttttaaatacttctgat 29245074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 4210829 - 4210738
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  4210829 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 4210738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 22959622 - 22959713
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  22959622 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 22959713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 27222338 - 27222247
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  27222338 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 27222247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 35253950 - 35253859
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  35253950 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 35253859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 35264559 - 35264468
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  35264559 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 35264468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 9772595 - 9772686
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |  | |||||||||||||||||    
T  9772595 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataacctcttctagatttcttttaaatacttctgat 9772686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 34803650 - 34803739
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||  |||  ||||| ||||||||||||    
T  34803650 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccctactataaccacttttaaattttttttaatacttctgat 34803739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 40223270 - 40223182
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||  ||||| ||||||||||||    
T  40223270 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccctactataaccacttctaaa-tttttttaatacttctgat 40223182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 43346347 - 43346254
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta--tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  43346347 gttgatgacaaaagggggagtaaatgtatagtatttttttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 43346254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 11404759 - 11404851
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||  ||||||||||||| |||  | |||||||||||||||||    
T  11404759 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctgctataaccacttctaaatttcttttaaatacttctgat 11404851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 10267933 - 10267841
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||| || ||||||||| |||| |||  | |||||||| ||||||||    
T  10267933 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagtcctactataacctcttctaaatttcttttaaattcttctgat 10267841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 10278510 - 10278418
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||| || ||||||||| |||| |||  | |||||||| ||||||||    
T  10278510 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagtcctactataacctcttctaaatttcttttaaattcttctgat 10278418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 28731150 - 28731203
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||  |||||||||    
T  28731150 gttgatgacaaaagggggagtagatgtatagtatttttaaggctttgagcccca 28731203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9907343 - 9907379
Alignment:
Q  1 tctgatgatatttattgtttttaatgtcttatgctct 37  Q
    |||||| ||||||||||||||||||||||||||||||    
T  9907343 tctgataatatttattgtttttaatgtcttatgctct 9907379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 18937371 - 18937334
Alignment:
Q  104 ttgatgacaagagggggagtaaatgtatagtatttata 141  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  18937371 ttgatgacaaaagggggagtagatgtatagtatttata 18937334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 19312220 - 19312272
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||| |||||||||||| | |||| ||||||||||    
T  19312220 gttgatgacaaaagggggagtaagtgtatagtattt-ttaggctctgagcccca 19312272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 22318437 - 22318385
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||  |||||||||||||| |||| ||||||||||    
T  22318437 gttgatgacaaaagggggagtagctgtatagtatttat-aggctctgagcccca 22318385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 27222451 - 27222415
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  27222451 atgatatttattgattttaatgtcatatgctctgata 27222415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 35254063 - 35254027
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  35254063 atgatatttattgattttaatgtcatatgctctgata 35254027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 35264672 - 35264636
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  35264672 atgatatttattgattttaatgtcatatgctctgata 35264636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 2e-32; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 5649689 - 5649778
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5649689 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaacttttttaaatacttctgat 5649778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 4168150 - 4168061
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    |||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4168150 gttgattacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaacttttttaaatacttctgat 4168061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 21864554 - 21864463
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  | |||||||||||||||||    
T  21864554 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataaccacttctaaatttcttttaaatacttctgat 21864463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 12731440 - 12731349
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc-aaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    ||||||||||||||||||    
T  12731440 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataaccacttctaatttttttttaaatacttctgat 12731349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 12742033 - 12741942
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc-aaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    ||||||||||||||||||    
T  12742033 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataaccacttctaatttttttttaaatacttctgat 12741942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 7508230 - 7508138
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattta-taaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  7508230 gttgatgacaaaagggggagtaaatgtatagtatttattaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 7508138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 12623095 - 12623186
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||| ||||||||    
T  12623095 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaattcttctgat 12623186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 19179858 - 19179766
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaa---cctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||     ||||||||||||||||||    
T  19179858 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaatttattttttaaatacttctgat 19179766  T

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Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 35400444 - 35400535
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  35400444 gttgatgacaaaagtgggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 35400535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 35647970 - 35648061
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||  ||||||||||||| |||  | |||||||||||||||||    
T  35647970 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctgctataaccacttctaaatttcttttaaatacttctgat 35648061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 3172516 - 3172424
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  3172516 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 3172424  T

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Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 51655742 - 51655834
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  51655742 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 51655834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 5834147 - 5834081
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  5834147 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataacaacttc 5834081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 47617817 - 47617883
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  47617817 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataacaacttc 47617883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 38095971 - 38095910
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataac 163  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||  |||||||    
T  38095971 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctgctataac 38095910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 153551 - 153602
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccc 155  Q
    ||||||||||| |||||||||||||||||||||||| |||||| |||||||||    
T  153551 gttgatgacaaaagggggagtaaatgtatagtattt-taaggctctgagcccc 153602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 36246300 - 36246352
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccc 154  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  36246300 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccc 36246352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 3172631 - 3172595
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    |||||||||||||||||||||||| ||||||||||||    
T  3172631 atgatatttattgtttttaatgtcatatgctctgata 3172595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 7680178 - 7680120
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataa 162  Q
    ||||||||||| |||||||||| |||||||| |||| |||||| |||||||||| |||||    
T  7680178 gttgatgacaaaagggggagtagatgtatagcattt-taaggctctgagccccattataa 7680120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 20953706 - 20953744
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttata 141  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  20953706 gttgatgacaaaagggggagtagatgtatagtatttata 20953744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 36134956 - 36134918
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttata 141  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  36134956 gttgatgacaaaagggggagtagatgtatagtatttata 36134918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 20883118 - 20883170
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||||||||||||| ||| | |||| ||||||||||    
T  20883118 gttgatgacaaaagggggagtaaatgtatagtcttt-ttaggctctgagcccca 20883170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 22643737 - 22643685
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||||||||||| ||||| | |||| ||||||||||    
T  22643737 gttgatgacaaaagggggagtaaatgtataatattt-ttaggctctgagcccca 22643685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 23067788 - 23067736
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||| |||||||||||| | |||| ||||||||||    
T  23067788 gttgatgacaaaagggggagtaattgtatagtattt-ttaggctctgagcccca 23067736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 5834258 - 5834222
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  5834258 atgatatttattgattttaatgtcatatgctctgata 5834222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21134413 - 21134464
Alignment:
Q  104 ttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    |||||||||| ||||||||||  |||||||||||||| |||| ||||||||||    
T  21134413 ttgatgacaaaagggggagtagttgtatagtatttat-aggctctgagcccca 21134464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 35400331 - 35400367
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  35400331 atgatatttattgattttaatgtcatatgctctgata 35400367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 35647856 - 35647892
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  35647856 atgatatttattgattttaatgtcatatgctctgata 35647892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 47617704 - 47617740
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  47617704 atgatatttattgattttaatgtcatatgctctgata 47617740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 26112209 - 26112119
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctt-tttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  26112209 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaactttgtttaaatacttctgat 26112119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 6152030 - 6151939
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  6152030 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 6151939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 19129709 - 19129619
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaac-ctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||    
T  19129709 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaactttttttaaatacatctgat 19129619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 242799 - 242707
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  242799 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 242707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 796169 - 796077
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  796169 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 796077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 3358506 - 3358598
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  3358506 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 3358598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 36078911 - 36078820
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| | |  | |||||||||||||||||    
T  36078911 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctactataacaacttctacatttcttttaaatacttctgat 36078820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 13687900 - 13687966
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  13687900 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctgctataaccacttc 13687966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 32087573 - 32087666
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta--tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  32087573 gttgatgacaaaagggggagtaaatgtatagtatttttttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 32087666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 9342121 - 9342029
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  9342121 gttgataacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 9342029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 36293878 - 36293786
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||| |||||||||||||||||||  ||||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  36293878 gttgatgacaaaagggagagtaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 36293786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 15780012 - 15780102
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc-aaaacctttttaaatacttctgat 193  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||   ||||| ||||||||||||    
T  15780012 gttgatgacaaaagagggagtaaatgtatagtattt-taaggcactgagccctactataaccacttctaaatttttttttaatacttctgat 15780102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 15790601 - 15790691
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc-aaaacctttttaaatacttctgat 193  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||   ||||| ||||||||||||    
T  15790601 gttgatgacaaaagagggagtaaatgtatagtattt-taaggcactgagccctactataaccacttctaaatttttttttaatacttctgat 15790691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 44482081 - 44482014
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  44482081 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctactataaccacttc 44482014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 209457 - 209550
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta--tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||  ||| |||||||| |||||| |||||||||||||| |||  | |||||||||||||||||    
T  209457 gttgatgacaaaagggggagtaaatgtatagtatttttttaaggcacagagccctactataaccacttctaaatttcttttaaatacttctgat 209550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 723080 - 723173
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta--tttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||  ||| |||||||| |||||| |||||||||||||| |||  | |||||||||||||||||    
T  723080 gttgatgacaaaagggggagtaaatgtatagtatttttttaaggcacagagccctactataaccacttctaaatttcttttaaatacttctgat 723173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 19419370 - 19419317
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||| |||||| ||||||||||    
T  19419370 gttgatgacaaaagggggagtagatgtatagtatttttaaggctctgagcccca 19419317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 29077696 - 29077644
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagta-tttataaggcactgagccc 154  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  29077696 gttgatgacaaaagggggagtaaatgtatagtattttttaaggcactgagccc 29077644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 19225903 - 19225845
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataa 162  Q
    ||||||||||| |||||||||| ||||||||||||| |||||| |||||||||| |||||    
T  19225903 gttgatgacaaaagggggagtagatgtatagtattt-taaggctctgagccccattataa 19225845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 3597689 - 3597741
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  3597689 gttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 3597741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 17518374 - 17518426
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||||||||||||||||| | |||| ||||||||||    
T  17518374 gttgatgacaaaagggggagtaaatgtatagtattt-ttaggctctgagcccca 17518426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 20381711 - 20381763
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  20381711 gttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 20381763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 23468694 - 23468747
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||  |||||||||||| |||||| ||||||||||    
T  23468694 gttgatgacaaaagggggagtagttgtatagtatttttaaggctctgagcccca 23468747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 30324562 - 30324613
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccc 155  Q
    ||||||||||| |||||||||| ||||||||||||| |||||| |||||||||    
T  30324562 gttgatgacaaaagggggagtagatgtatagtattt-taaggctctgagcccc 30324613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 21289193 - 21289155
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttata 141  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  21289193 gttgatgacaaaagggggagtagatgtatagtatttata 21289155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 19927870 - 19927818
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||| ||||||||||| |||| ||||||||||    
T  19927870 gttgatgacaaaagggggagtagatgcatagtatttat-aggctctgagcccca 19927818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 24647119 - 24647082
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttat 140  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  24647119 gttgatgacaaaagggggagtagatgtatagtatttat 24647082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 29087940 - 29087895
Alignment:
Q  110 acaagagggggagtaaatgtatagta-tttataaggcactgagccc 154  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||    
T  29087940 acaaaagggggagtaaatgtatagtattttttaaggcactgagccc 29087895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 13687786 - 13687822
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  13687786 atgatatttattgattttaatgtcatatgctctgata 13687822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 36079022 - 36078986
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  36079022 atgatatttattgattttaatgtcatatgctctgata 36078986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 44482194 - 44482158
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  44482194 atgatatttattgattttaatgtcatatgctctgata 44482158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 46882 - 46973
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  46882 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 46973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 46769 - 46805
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  46769 atgatatttattgattttaatgtcatatgctctgata 46805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 9e-26; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 16256853 - 16256762
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  16256853 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 16256762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 24641266 - 24641175
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||  | |||||||||||||||||    
T  24641266 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactacaaccacttctaaatttcttttaaatacttctgat 24641175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 451561 - 451495
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  451561 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataaccacttc 451495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 19954286 - 19954371
Alignment:
Q  107 atgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  19954286 atgacaaaagggggaataaatgtatagtattt-taaggcactgagccccactataaccacttctaaatttttttaaatacttctgat 19954371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 30936346 - 30936412
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30936346 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataaccacttc 30936412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 40469865 - 40469941
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaaccttttt 180  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  40469865 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataaccacttctaaactttttt 40469941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 21997403 - 21997337
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  21997403 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccccactataacctcttc 21997337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 17919031 - 17918945
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||   |||| ||||||||||||    
T  17919031 gttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataacctcttctaaa---tttttaatacttctgat 17918945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 18762368 - 18762431
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccac 166  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  18762368 gttgatgacaaaagggggagtaaatgtatagtatttttaagacactgagccccactataaccac 18762431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 24027366 - 24027451
Alignment:
Q  104 ttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaacctttttaaatacttctgat 193  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||   |||| ||||||||||||    
T  24027366 ttgatgacaaaagggggagtaaatgtatagtattt-taaggcactgagccccactataacctcttctaaa---tttttaatacttctgat 24027451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 27657598 - 27657532
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttc 169  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  27657598 gttgatgacaaaagggggagtaaatgtatagtatttttaaggcactgagccctgctataaccacttc 27657532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 55755129 - 55755221
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||  ||||||||||||| |||  | |||||||||||||||||    
T  55755129 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctgctataaccacttctaaatttcttttaaatacttctgat 55755221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 10750423 - 10750516
Alignment:
Q  103 gttgatgacaagagggggagtaaa-tgtatagtatttat-aaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||| |||||||||||| | |||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  10750423 gttgatgacaaaagggggagtaaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 10750516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 10964192 - 10964285
Alignment:
Q  103 gttgatgacaagagggggagtaaa-tgtatagtatttat-aaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| |||||||||||| |||||||||||| | |||||||||||||| |||||||||||||| |||  | |||||||||||||||||    
T  10964192 gttgatgacaaaagggggagtaaaatgtatagtatttgttaaggcactgagccctactataaccacttctaaatttcttttaaatacttctgat 10964285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 36019320 - 36019228
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||| || ||||||||| |||| |||  | |||||||||||||||||    
T  36019320 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagtcctactataacctcttctaaatttcttttaaatacttctgat 36019228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 18762255 - 18762291
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    |||||||||||||||||||||||| ||||||||||||    
T  18762255 atgatatttattgtttttaatgtcctatgctctgata 18762291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 27657712 - 27657676
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27657712 atgatatttattgtttttaatgtcatatgctctgata 27657676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 15474465 - 15474503
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttata 141  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  15474465 gttgatgacaaaagggggagtagatgtatagtatttata 15474503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 13004181 - 13004233
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||| ||||||| |||| ||||||||||    
T  13004181 gttgatgacaaaagggggagtagatgtatattatttat-aggctctgagcccca 13004233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 16818578 - 16818630
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||| |||||||||||| | |||| ||||||||||    
T  16818578 gttgatgacaaaagggggagtaagtgtatagtattt-ttaggctctgagcccca 16818630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 24641379 - 24641343
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  24641379 atgatatttattgattttaatgtcatatgctctgata 24641343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 3816 - 3887
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccactataaccacttcaaaac 174  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  3816 gttgatgacaaaaggaggagtaaatgtatagtatttttaaggcactgagccccactataaccactttaaaac 3887  T

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Target: scaffold0906; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3714 - 3754
Alignment:
Q  1 tctgatgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  3714 tctgatgatatttattgtttttaatgtcttatgctttgata 3754  T

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Target: scaffold0133 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 32079 - 31987
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt-ataaggcactgagccccactataaccacttcaaaacct-ttttaaatacttctgat 193  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||  ||||||||||||| |||  | |||||||||||||||||    
T  32079 gttgatgacaaaagggggagtaaatgtatagtatttgttaaggcactgagccctgctataaccacttctaaatttcttttaaatacttctgat 31987  T

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Target: scaffold0199 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 23577 - 23526
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccc 154  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  23577 gttgatgacaaaagggggagtaaatgtatagtatttttaatgcactgagccc 23526  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 52801 - 52852
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccc 155  Q
    ||||||||||| |||||||||||||||||||||||| |||||| |||||||||    
T  52801 gttgatgacaaaagggggagtaaatgtatagtattt-taaggctctgagcccc 52852  T

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Target: scaffold1260 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1260
Description:

Target: scaffold1260; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 2096 - 2148
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| |||||||||||||| ||||| ||||||||||    
T  2096 gttgatgacaaaagggggagtagatgtatagtattta-aaggctctgagcccca 2148  T

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Target: scaffold1002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1002
Description:

Target: scaffold1002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 3183 - 3235
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||| |||||| ||||||||||    
T  3183 gttgatgacaaaagggggagtagatgtatagtattt-taaggctctgagcccca 3235  T

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Target: scaffold0414 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 6413 - 6465
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  6413 gttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 6465  T

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Target: scaffold0315 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 18744 - 18692
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  18744 gttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 18692  T

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Target: scaffold0269 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 8145 - 8092
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||  |||||| ||||||||||    
T  8145 gttgatgacaaaagggggagtagatgtatagtattgttaaggctctgagcccca 8092  T

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Target: scaffold0203 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 23399 - 23451
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  23399 gttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 23451  T

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Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 34088 - 34140
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  34088 gttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 34140  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 134670 - 134722
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  134670 gttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 134722  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 30153 - 30205
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  30153 gttgatgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 30205  T

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Target: scaffold1216 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 42 - 7
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtattt 138  Q
    ||||||||||| ||||||||||||||||||||||||    
T  42 gttgatgacaaaagggggagtaaatgtatagtattt 7  T

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Target: scaffold0426 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 14440 - 14390
Alignment:
Q  105 tgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  14440 tgatgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 14390  T

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Target: scaffold0435 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 4601 - 4639
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttata 141  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  4601 gttgatgacaatagggggagtatatgtatagtatttata 4639  T

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Target: scaffold0752 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 2853 - 2801
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||| |||||||||||| | |||| ||||||||||    
T  2853 gttgatgacaaaagggggagtaattgtatagtattt-ttaggctctgagcccca 2801  T

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Target: scaffold0547 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 1719 - 1667
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||| |||||||||||| | |||| ||||||||||    
T  1719 gttgatgacaaaagggggagtaagtgtatagtattt-ttaggctctgagcccca 1667  T

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Target: scaffold0387 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 8227 - 8175
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||  |||||||||||||| |||| ||||||||||    
T  8227 gttgatgacaaaagggggagtagttgtatagtatttat-aggctctgagcccca 8175  T

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Target: scaffold0382 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 10552 - 10604
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||| |||||||||||| | |||| ||||||||||    
T  10552 gttgatgacaaaagggggagtaagtgtatagtattt-ttaggctctgagcccca 10604  T

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Target: scaffold0297 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 17819 - 17767
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| || ||||||||||||||||||||| | |||| ||||||||||    
T  17819 gttgatgacaaaagtgggagtaaatgtatagtattt-ttaggctctgagcccca 17767  T

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Target: scaffold0185 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 10146 - 10094
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||| |||||||||||| ||| || ||||||||||    
T  10146 gttgatgacaaaagggggagtaagtgtatagtatttttaa-gctctgagcccca 10094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 24640 - 24692
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| |||||||||| ||||||| ||||||| |||| ||||||||||    
T  24640 gttgatgacaaaagggggagtagatgtatattatttat-aggctctgagcccca 24692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 143 - 91
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||| |||||||||||| | |||| ||||||||||    
T  143 gttgatgacaaaagggggagtaagtgtatagtattt-ttaggctctgagcccca 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 59306 - 59254
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||||||| ||||||||||| |||||||||||| | |||| ||||||||||    
T  59306 gttgatgacaaaagggggagtaagtgtatagtattt-ttaggctctgagcccca 59254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 60170 - 60218
Alignment:
Q  107 atgacaagagggggagtaaatgtatagtatttataaggcactgagcccca 156  Q
    ||||||| |||||||||| ||||||||||||||| |||| ||||||||||    
T  60170 atgacaaaagggggagtagatgtatagtatttat-aggctctgagcccca 60218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 2333 - 2297
Alignment:
Q  5 atgatatttattgtttttaatgtcttatgctctgata 41  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  2333 atgatatttattgattttaatgtcatatgctctgata 2297  T

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Target: scaffold0411 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 2383 - 2438
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccacta 159  Q
    ||||||||||| ||||||||||  |||||||||||| | |||| |||||||||||||    
T  2383 gttgatgacaaaagggggagtagttgtatagtattt-ttaggctctgagccccacta 2438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 6414 - 6469
Alignment:
Q  103 gttgatgacaagagggggagtaaatgtatagtatttataaggcactgagccccacta 159  Q
    ||||||||||| ||||||||||  |||||||||||| | |||| |||||||||||||    
T  6414 gttgatgacaaaagggggagtagttgtatagtattt-ttaggctctgagccccacta 6469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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