View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8903_low_120 (Length: 205)
Name: NF8903_low_120
Description: NF8903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8903_low_120 |
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Alignment Details
Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 173
Target Start/End: Complemental strand, 44554838 - 44554689
Alignment:
| Q |
21 |
tactcaactcatttcaatttcaaaacatgtttttatttcttgtttattttgtaattttgttactattatcttatgctaatttccatgccttttttatatc |
120 |
Q |
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| T |
44554838 |
tactcaactcatttcaatttcaaaccatgtttttatttcttgtttattttgtaattttgtta---ttatcttatgctaatttccatgccttttttatatc |
44554742 |
T |
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| Q |
121 |
atgcatttgtcttgtagctgaatttgatgagataagataaagagtacacatac |
173 |
Q |
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| T |
44554741 |
atgcatttgtcttgtagctgaatttgatgagataagataaagagtacacatac |
44554689 |
T |
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