View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8903_low_56 (Length: 330)

Name: NF8903_low_56
Description: NF8903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8903_low_56
NF8903_low_56
[»] chr1 (51 HSPs)
chr1 (5-321)||(4955991-4956286)
chr1 (1-105)||(22077554-22077658)
chr1 (19-107)||(22077905-22077993)
chr1 (1-105)||(5320024-5320128)
chr1 (1-100)||(44290517-44290616)
chr1 (4-105)||(24600376-24600477)
chr1 (1-105)||(66531-66635)
chr1 (3-75)||(22077171-22077243)
chr1 (6-105)||(41184489-41184588)
chr1 (1-100)||(44290884-44290983)
chr1 (1-99)||(3550721-3550819)
chr1 (3-105)||(39066261-39066363)
chr1 (5-105)||(3875394-3875494)
chr1 (1-105)||(17294572-17294676)
chr1 (1-105)||(26661581-26661685)
chr1 (1-105)||(34364502-34364606)
chr1 (1-105)||(34364920-34365024)
chr1 (1-90)||(5528813-5528902)
chr1 (1-105)||(37556106-37556210)
chr1 (5-102)||(41142370-41142467)
chr1 (1-105)||(1188647-1188751)
chr1 (1-105)||(31767220-31767324)
chr1 (1-105)||(41156986-41157090)
chr1 (6-105)||(44685451-44685551)
chr1 (1-93)||(50052082-50052174)
chr1 (1-100)||(32594775-32594874)
chr1 (1-105)||(66146-66252)
chr1 (23-105)||(21378122-21378204)
chr1 (15-105)||(41157370-41157460)
chr1 (23-100)||(3537228-3537305)
chr1 (1-102)||(30630697-30630798)
chr1 (1-105)||(40082402-40082505)
chr1 (6-93)||(24132049-24132136)
chr1 (25-104)||(45084378-45084457)
chr1 (15-105)||(29798194-29798284)
chr1 (1-77)||(48588547-48588623)
chr1 (1-92)||(14318875-14318966)
chr1 (1-100)||(41759483-41759582)
chr1 (3-105)||(19283516-19283618)
chr1 (23-105)||(37850681-37850763)
chr1 (1-78)||(3537658-3537735)
chr1 (18-106)||(1187440-1187528)
chr1 (31-74)||(5575130-5575173)
chr1 (1-104)||(11977276-11977379)
chr1 (27-105)||(4878798-4878876)
chr1 (1-105)||(26661957-26662061)
chr1 (18-105)||(22793273-22793360)
chr1 (39-98)||(34649440-34649499)
chr1 (1-66)||(9955942-9956008)
chr1 (1-78)||(38804414-38804491)
chr1 (17-105)||(24448272-24448360)
[»] chr4 (65 HSPs)
chr4 (1-105)||(3244508-3244612)
chr4 (1-105)||(25483331-25483435)
chr4 (1-105)||(36629232-36629336)
chr4 (1-105)||(4955374-4955478)
chr4 (2-105)||(52884882-52884985)
chr4 (26-105)||(54741260-54741339)
chr4 (1-105)||(10245915-10246018)
chr4 (1-105)||(32941180-32941284)
chr4 (1-105)||(34646706-34646810)
chr4 (1-100)||(55933181-55933280)
chr4 (31-105)||(2740695-2740769)
chr4 (1-99)||(16889593-16889691)
chr4 (5-103)||(54017656-54017754)
chr4 (1-78)||(44621024-44621101)
chr4 (1-105)||(1731704-1731808)
chr4 (1-105)||(39792917-39793021)
chr4 (3-102)||(23556925-23557024)
chr4 (1-100)||(41370357-41370456)
chr4 (23-105)||(43174501-43174584)
chr4 (6-105)||(49076510-49076609)
chr4 (18-93)||(50459728-50459803)
chr4 (1-100)||(50630812-50630911)
chr4 (2-105)||(52884690-52884793)
chr4 (17-99)||(16888889-16888971)
chr4 (18-108)||(34004658-34004747)
chr4 (1-102)||(2741069-2741170)
chr4 (1-78)||(54108935-54109011)
chr4 (1-105)||(22028018-22028122)
chr4 (1-102)||(49302902-49303005)
chr4 (1-105)||(50002421-50002525)
chr4 (1-100)||(49880160-49880259)
chr4 (23-105)||(10246342-10246424)
chr4 (3-105)||(22183323-22183425)
chr4 (3-105)||(41707523-41707625)
chr4 (1-91)||(44620362-44620452)
chr4 (24-93)||(6975536-6975605)
chr4 (1-78)||(45496827-45496904)
chr4 (1-78)||(54936218-54936295)
chr4 (1-105)||(3340802-3340906)
chr4 (1-105)||(36572014-36572118)
chr4 (2-105)||(39404393-39404496)
chr4 (23-93)||(20825843-20825913)
chr4 (23-105)||(44620655-44620737)
chr4 (1-66)||(22028426-22028491)
chr4 (25-105)||(3341123-3341203)
chr4 (5-77)||(18932810-18932882)
chr4 (1-105)||(36608718-36608822)
chr4 (1-105)||(39404013-39404117)
chr4 (1-105)||(51768117-51768221)
chr4 (26-78)||(54017784-54017836)
chr4 (34-105)||(45489421-45489492)
chr4 (31-78)||(54343088-54343135)
chr4 (31-105)||(3700360-3700434)
chr4 (1-47)||(31691205-31691251)
chr4 (32-105)||(4390189-4390262)
chr4 (16-105)||(28034224-28034313)
chr4 (1-105)||(49076888-49076991)
chr4 (32-75)||(39699034-39699077)
chr4 (34-105)||(44621421-44621492)
chr4 (15-93)||(760196-760274)
chr4 (23-93)||(20826224-20826294)
chr4 (5-79)||(34544127-34544201)
chr4 (34-92)||(44620304-44620362)
chr4 (3-72)||(54108564-54108634)
chr4 (1-46)||(23817738-23817783)
[»] chr2 (53 HSPs)
chr2 (1-105)||(28254296-28254400)
chr2 (1-105)||(15880258-15880362)
chr2 (1-105)||(28531373-28531477)
chr2 (1-105)||(962593-962697)
chr2 (1-100)||(36178664-36178763)
chr2 (15-105)||(31899499-31899589)
chr2 (1-98)||(6421387-6421484)
chr2 (1-105)||(36005939-36006042)
chr2 (1-100)||(14745726-14745825)
chr2 (1-100)||(37106188-37106287)
chr2 (5-100)||(41283538-41283633)
chr2 (1-103)||(7598225-7598327)
chr2 (1-79)||(28254171-28254249)
chr2 (19-103)||(1769889-1769973)
chr2 (1-105)||(30313173-30313276)
chr2 (1-105)||(33561510-33561614)
chr2 (1-105)||(42514644-42514748)
chr2 (1-105)||(31468809-31468909)
chr2 (1-100)||(37105924-37106023)
chr2 (25-103)||(7598606-7598684)
chr2 (15-105)||(16542444-16542534)
chr2 (4-105)||(29873599-29873700)
chr2 (1-105)||(35580783-35580886)
chr2 (1-105)||(38796679-38796783)
chr2 (1-105)||(40679688-40679792)
chr2 (23-107)||(40733510-40733594)
chr2 (23-98)||(6712978-6713053)
chr2 (31-105)||(38796307-38796381)
chr2 (5-105)||(12529091-12529191)
chr2 (1-93)||(14745353-14745445)
chr2 (1-93)||(33731655-33731747)
chr2 (1-105)||(37895120-37895224)
chr2 (5-100)||(5542688-5542783)
chr2 (1-100)||(5543057-5543156)
chr2 (1-100)||(36178328-36178427)
chr2 (35-78)||(40163466-40163509)
chr2 (3-105)||(9231244-9231346)
chr2 (23-105)||(37632678-37632760)
chr2 (17-105)||(15511570-15511656)
chr2 (1-78)||(36178230-36178307)
chr2 (43-105)||(36785664-36785726)
chr2 (5-78)||(6422132-6422205)
chr2 (15-92)||(29676543-29676620)
chr2 (1-105)||(12910223-12910327)
chr2 (1-105)||(30323459-30323563)
chr2 (15-107)||(37894765-37894857)
chr2 (38-78)||(42515038-42515078)
chr2 (5-105)||(23346230-23346331)
chr2 (33-107)||(40733876-40733950)
chr2 (32-105)||(29676898-29676971)
chr2 (3-104)||(29874084-29874185)
chr2 (23-76)||(31259697-31259750)
chr2 (1-105)||(33953830-33953934)
[»] chr6 (39 HSPs)
chr6 (1-105)||(10074050-10074154)
chr6 (1-105)||(10074422-10074526)
chr6 (1-105)||(16107673-16107777)
chr6 (1-100)||(3409259-3409358)
chr6 (1-100)||(35210204-35210303)
chr6 (17-93)||(9062424-9062500)
chr6 (1-100)||(14748397-14748496)
chr6 (1-100)||(29518503-29518602)
chr6 (1-100)||(29518920-29519019)
chr6 (1-100)||(32741179-32741278)
chr6 (4-66)||(10911600-10911662)
chr6 (1-98)||(2377756-2377853)
chr6 (1-93)||(2843561-2843654)
chr6 (2-103)||(5958663-5958764)
chr6 (1-105)||(2579931-2580035)
chr6 (1-93)||(32460639-32460731)
chr6 (5-100)||(2378126-2378221)
chr6 (15-105)||(16108058-16108148)
chr6 (15-100)||(3409660-3409745)
chr6 (17-105)||(10073691-10073777)
chr6 (1-101)||(593768-593868)
chr6 (1-100)||(3058226-3058325)
chr6 (1-78)||(1127382-1127459)
chr6 (3-100)||(1846748-1846845)
chr6 (4-105)||(12092544-12092645)
chr6 (23-100)||(26544049-26544126)
chr6 (1-105)||(2578502-2578605)
chr6 (1-93)||(2579551-2579643)
chr6 (1-78)||(16454929-16455006)
chr6 (5-93)||(3415465-3415553)
chr6 (1-105)||(8481922-8482025)
chr6 (17-93)||(17135144-17135220)
chr6 (24-78)||(5832108-5832162)
chr6 (15-105)||(6071127-6071217)
chr6 (15-105)||(16454570-16454660)
chr6 (32-93)||(1950275-1950336)
chr6 (1-105)||(2578894-2578997)
chr6 (23-65)||(14789285-14789327)
chr6 (49-105)||(33605649-33605705)
[»] chr8 (57 HSPs)
chr8 (1-104)||(34835205-34835308)
chr8 (4-105)||(41972153-41972254)
chr8 (1-106)||(45122116-45122221)
chr8 (1-100)||(3669687-3669786)
chr8 (5-78)||(5420673-5420746)
chr8 (1-110)||(9608735-9608844)
chr8 (15-105)||(9309350-9309440)
chr8 (1-107)||(40518575-40518681)
chr8 (1-102)||(45121969-45122070)
chr8 (1-93)||(147458-147550)
chr8 (1-105)||(3038349-3038453)
chr8 (1-105)||(4154725-4154829)
chr8 (2-98)||(25561876-25561972)
chr8 (1-105)||(30359266-30359370)
chr8 (1-77)||(33113426-33113502)
chr8 (1-105)||(34834871-34834975)
chr8 (1-104)||(34835470-34835574)
chr8 (1-104)||(34835736-34835840)
chr8 (1-76)||(45122648-45122723)
chr8 (23-105)||(8794106-8794188)
chr8 (2-105)||(9308972-9309077)
chr8 (15-93)||(9482677-9482755)
chr8 (5-93)||(70337-70425)
chr8 (4-100)||(1013933-1014029)
chr8 (5-77)||(9609108-9609180)
chr8 (1-100)||(1014304-1014403)
chr8 (3-93)||(43398129-43398222)
chr8 (1-75)||(9483246-9483320)
chr8 (15-105)||(9620749-9620839)
chr8 (23-105)||(30359604-30359686)
chr8 (16-98)||(40579580-40579662)
chr8 (23-93)||(43274860-43274930)
chr8 (17-105)||(6876937-6877026)
chr8 (1-105)||(8918823-8918927)
chr8 (23-87)||(20870654-20870718)
chr8 (1-100)||(3670060-3670159)
chr8 (35-102)||(18372349-18372416)
chr8 (31-102)||(18372788-18372859)
chr8 (15-74)||(18373004-18373063)
chr8 (1-105)||(40518064-40518170)
chr8 (1-63)||(18372053-18372115)
chr8 (23-93)||(41416252-41416322)
chr8 (1-78)||(1513974-1514051)
chr8 (15-74)||(18372676-18372734)
chr8 (17-87)||(3037783-3037853)
chr8 (1-63)||(9507819-9507881)
chr8 (1-100)||(30441081-30441184)
chr8 (20-105)||(12283868-12283953)
chr8 (1-105)||(4154340-4154443)
chr8 (34-78)||(25561736-25561780)
chr8 (23-78)||(45121737-45121792)
chr8 (31-105)||(33831973-33832047)
chr8 (24-78)||(37544572-37544626)
chr8 (23-104)||(45123002-45123081)
chr8 (49-105)||(147824-147880)
chr8 (49-105)||(20995508-20995564)
chr8 (18-74)||(32305503-32305559)
[»] scaffold0078 (2 HSPs)
scaffold0078 (15-105)||(5352-5442)
scaffold0078 (1-105)||(4977-5081)
[»] chr3 (52 HSPs)
chr3 (1-102)||(21832402-21832503)
chr3 (1-105)||(15773187-15773291)
chr3 (1-105)||(37990698-37990802)
chr3 (1-105)||(12114621-12114725)
chr3 (16-105)||(25739499-25739588)
chr3 (1-105)||(35946517-35946621)
chr3 (1-105)||(37991036-37991140)
chr3 (1-105)||(43346850-43346954)
chr3 (1-105)||(49336746-49336850)
chr3 (16-100)||(51886561-51886645)
chr3 (24-105)||(9240144-9240225)
chr3 (1-105)||(33175720-33175827)
chr3 (3-103)||(15772851-15772951)
chr3 (1-105)||(25755389-25755493)
chr3 (1-105)||(29644640-29644744)
chr3 (1-105)||(29644961-29645065)
chr3 (1-100)||(22304569-22304668)
chr3 (23-105)||(54017897-54017979)
chr3 (16-105)||(33803326-33803415)
chr3 (4-77)||(39935017-39935090)
chr3 (1-78)||(41359824-41359901)
chr3 (5-105)||(45901708-45901809)
chr3 (1-104)||(1634373-1634477)
chr3 (1-105)||(8327899-8328003)
chr3 (1-105)||(42342149-42342253)
chr3 (1-105)||(42342447-42342551)
chr3 (1-105)||(52634671-52634774)
chr3 (1-100)||(4823655-4823754)
chr3 (4-105)||(32462962-32463064)
chr3 (23-105)||(39914247-39914329)
chr3 (3-108)||(39336290-39336395)
chr3 (1-61)||(32589742-32589802)
chr3 (1-105)||(47964974-47965078)
chr3 (24-100)||(50612534-50612610)
chr3 (1-105)||(53577359-53577463)
chr3 (17-92)||(7767389-7767464)
chr3 (26-105)||(31190012-31190091)
chr3 (1-100)||(39389070-39389169)
chr3 (32-105)||(53118064-53118137)
chr3 (32-100)||(37726504-37726572)
chr3 (33-104)||(11661531-11661602)
chr3 (23-78)||(42584903-42584958)
chr3 (23-102)||(54018279-54018358)
chr3 (1-103)||(3384325-3384427)
chr3 (3-105)||(44160605-44160707)
chr3 (4-93)||(3135135-3135224)
chr3 (1-105)||(45395712-45395816)
chr3 (1-74)||(33362352-33362425)
chr3 (44-105)||(43346645-43346706)
chr3 (5-93)||(11661958-11662046)
chr3 (61-105)||(12747871-12747915)
chr3 (1-105)||(47964577-47964681)
[»] chr7 (43 HSPs)
chr7 (1-105)||(7517575-7517679)
chr7 (1-105)||(30245072-30245176)
chr7 (15-105)||(28301616-28301706)
chr7 (1-105)||(23436-23540)
chr7 (1-105)||(1085675-1085779)
chr7 (5-105)||(16569191-16569291)
chr7 (5-105)||(16596371-16596471)
chr7 (1-100)||(37533069-37533168)
chr7 (1-105)||(7554020-7554124)
chr7 (1-105)||(22566721-22566825)
chr7 (5-105)||(22567102-22567201)
chr7 (1-105)||(30244265-30244369)
chr7 (17-105)||(43241490-43241578)
chr7 (1-105)||(45434631-45434735)
chr7 (3-93)||(11845198-11845288)
chr7 (1-107)||(40230350-40230456)
chr7 (1-90)||(6054570-6054659)
chr7 (1-98)||(47129097-47129194)
chr7 (1-105)||(118360-118464)
chr7 (5-105)||(24177430-24177530)
chr7 (1-93)||(34218093-34218185)
chr7 (1-105)||(40094833-40094937)
chr7 (1-105)||(45433236-45433340)
chr7 (1-92)||(19122740-19122830)
chr7 (23-105)||(8128522-8128604)
chr7 (1-107)||(36622953-36623059)
chr7 (32-105)||(36109007-36109080)
chr7 (1-105)||(45754711-45754814)
chr7 (1-100)||(29157565-29157664)
chr7 (1-107)||(9901638-9901742)
chr7 (1-102)||(36939792-36939893)
chr7 (1-93)||(20599321-20599413)
chr7 (33-105)||(30245489-30245561)
chr7 (33-105)||(30255334-30255406)
chr7 (1-93)||(37533423-37533515)
chr7 (1-75)||(1085307-1085381)
chr7 (31-105)||(30244696-30244770)
chr7 (17-105)||(41910669-41910757)
chr7 (1-100)||(14681510-14681609)
chr7 (23-105)||(36534865-36534947)
chr7 (1-58)||(30253534-30253591)
chr7 (35-90)||(24838795-24838850)
chr7 (57-105)||(36967344-36967392)
[»] chr5 (47 HSPs)
chr5 (23-105)||(41632777-41632859)
chr5 (1-105)||(26074607-26074711)
chr5 (1-105)||(26075221-26075325)
chr5 (1-93)||(41170641-41170733)
chr5 (1-93)||(9498713-9498805)
chr5 (1-105)||(26074205-26074309)
chr5 (1-104)||(40296374-40296477)
chr5 (4-105)||(11417039-11417138)
chr5 (15-105)||(31509618-31509708)
chr5 (4-105)||(299484-299585)
chr5 (3-100)||(6500823-6500919)
chr5 (24-105)||(15370094-15370175)
chr5 (1-98)||(18603179-18603276)
chr5 (5-78)||(42508634-42508707)
chr5 (5-105)||(6224191-6224291)
chr5 (1-105)||(13415819-13415923)
chr5 (5-105)||(36568630-36568730)
chr5 (1-100)||(6500451-6500549)
chr5 (1-100)||(32487394-32487492)
chr5 (23-105)||(1028598-1028680)
chr5 (3-105)||(3295405-3295506)
chr5 (1-104)||(3295074-3295176)
chr5 (18-105)||(36492293-36492380)
chr5 (35-105)||(12662745-12662815)
chr5 (1-107)||(35150000-35150105)
chr5 (1-78)||(34753084-34753161)
chr5 (23-98)||(26074320-26074395)
chr5 (38-93)||(38427555-38427610)
chr5 (10-92)||(35914857-35914939)
chr5 (24-98)||(42524719-42524792)
chr5 (4-77)||(2411030-2411103)
chr5 (23-100)||(27502117-27502194)
chr5 (1-77)||(25327958-25328034)
chr5 (1-105)||(26074841-26074945)
chr5 (4-100)||(26590972-26591068)
chr5 (15-79)||(31509752-31509816)
chr5 (1-105)||(42405655-42405759)
chr5 (3-100)||(29549316-29549413)
chr5 (36-100)||(623818-623882)
chr5 (1-100)||(624196-624295)
chr5 (4-63)||(15370439-15370498)
chr5 (15-105)||(24489279-24489367)
chr5 (15-78)||(33747793-33747856)
chr5 (1-105)||(36521955-36522059)
chr5 (25-77)||(7768873-7768925)
chr5 (1-93)||(36522296-36522388)
chr5 (32-92)||(41635281-41635341)
[»] scaffold0734 (2 HSPs)
scaffold0734 (15-105)||(5772-5862)
scaffold0734 (5-105)||(5391-5491)
[»] scaffold0702 (2 HSPs)
scaffold0702 (1-98)||(573-670)
scaffold0702 (31-100)||(231-300)
[»] scaffold0391 (2 HSPs)
scaffold0391 (1-105)||(1165-1269)
scaffold0391 (48-105)||(3091-3148)
[»] scaffold0171 (1 HSPs)
scaffold0171 (5-105)||(17519-17619)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-104)||(47356-47459)
[»] scaffold0504 (1 HSPs)
scaffold0504 (23-98)||(10192-10267)


Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 5 - 321
Target Start/End: Complemental strand, 4956286 - 4955991
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |                     ||||||||    
T  4956286 aaaactttagagcaatgagtttatggatcctcttacttataagatgttcaacctttacttttctatccgtt---------------------tgcacaca 4956208  T
Q  105 atagaactacatgctacaacctatatttcctttctctacttttttagaactgcatgcaagttctaagaacttaccagaaatctttgttgcnnnnnnngtt 204  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||    
T  4956207 atagaactacctgctgccacctatatttcctttctctacttttttagaactgcatgcaagttctaagaacttaccagaaatctttgttgcaaaaaaagtt 4956108  T
Q  205 taataaaagcaagagttgtcatcttttgacctaaaaactagattagacaaattaataatacttaactttaatttttgaaaaagaataatcataaacggat 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4956107 taataaaagcaagagttgtcatcttttgacctaaaaactagattagacaaattaataatacttaactttaatttttgaaaaagaataatcataaacagat 4956008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 22077554 - 22077658
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||| | ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  22077554 acccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataactcacacttgca 22077653  T
Q  101 cacaa 105  Q
    |||||    
T  22077654 cacaa 22077658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 22077905 - 22077993
Alignment:
Q  19 atgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaata 107  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||| |||||||||||||    
T  22077905 atgagtttatgggtcctcttacttataagatgttcaacctttatttttctatccgatttaaaacatataactcacacttgcacacaata 22077993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5320024 - 5320128
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||| ||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||||| | |||||||||||| ||||||    
T  5320024 acccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatataactcacacttgca 5320123  T
Q  101 cacaa 105  Q
     ||||    
T  5320124 tacaa 5320128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 44290517 - 44290616
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  44290517 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacacttgca 44290616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 24600376 - 24600477
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacac 103  Q
    |||||| ||| | ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| ||   |||||||||||| |||||||||    
T  24600376 caaaaccttaagacaatgagtttatgagttctcttacttataatatgttcaacctttacttttctatccgatatgggacatataactcacacttgcacac 24600475  T
Q  104 aa 105  Q
    ||    
T  24600476 aa 24600477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 66531 - 66635
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||| ||  |||||||  |||||||||||||||| ||||||||||||||||||||||||||| || | |||||||||||| ||||||    
T  66531 acccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaacctttacttttctatccgatatggaacatataactcacacttgca 66630  T
Q  101 cacaa 105  Q
    |||||    
T  66631 cacaa 66635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 22077171 - 22077243
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 75  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||    
T  22077171 ccaaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaacctttacttttctatccgat 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 41184489 - 41184588
Alignment:
Q  6 aaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||| ||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||| || ||||||||||||  |||||||||||| |||||||||||    
T  41184489 aaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaa 41184588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 44290884 - 44290983
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  44290884 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 44290983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3550819 - 3550721
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgc 99  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| |||||    
T  3550819 acccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgc 3550721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 39066261 - 39066363
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||| ||| | |||||| |||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||| |  ||||||||||| ||||||||    
T  39066261 ccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaacctttacttttctatccgatgtggaatatataactcacacttgcaca 39066360  T
Q  103 caa 105  Q
    |||    
T  39066361 caa 39066363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 3875394 - 3875494
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||||| ||| |||||||||||||| |||||||||||   ||||||||| || ||||||||||    
T  3875394 aaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttacttttttatccgatgtgtgacatataactgactcttgcacaca 3875493  T
Q  105 a 105  Q
    |    
T  3875494 a 3875494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 17294676 - 17294572
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||   |||||||||||| |||| |    
T  17294676 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatgtgggacatataactcacacttgta 17294577  T
Q  101 cacaa 105  Q
    |||||    
T  17294576 cacaa 17294572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 26661581 - 26661685
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| ||||||| ||||||||| ||||||||||||||| || || ||||||||   |||||||||||| |||| |    
T  26661581 acccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttactcttttacccgatgtgggacatataactcacacttgta 26661680  T
Q  101 cacaa 105  Q
    |||||    
T  26661681 cacaa 26661685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 34364606 - 34364502
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||| ||| ||||| |  |||||||||||||||| ||||||||||||||| || ||||||||||||  |||||||||||| ||||||    
T  34364606 acccaaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacacttgca 34364507  T
Q  101 cacaa 105  Q
    |||||    
T  34364506 cacaa 34364502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 34365024 - 34364920
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||| ||| ||||||| ||||||||||||||||| ||||||||||||| | || |||||||||||   |||||||||||| ||||||    
T  34365024 acccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatccgatgtgtgacatataactcacacttgca 34364925  T
Q  101 cacaa 105  Q
    |||||    
T  34364924 cacaa 34364920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5528813 - 5528902
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataact 90  Q
    ||||||||| ||| |  |||||||||||| ||||||||| ||||||||||||||||||||||| || ||||||||||||  |||||||||    
T  5528813 acccaaaaccttaagaaaatgagtttatgagtcctcttatttataagatgttcaacctttactcttttatccgatgtgagacatataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 37556210 - 37556106
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact-tttctatccgatgtgaagcatataactcacccttgc 99  Q
    ||||||||| ||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||   |||||||||||| ||||     
T  37556210 acccaaaaccttaaggctatgggtttatg-gtcctcttacttataagatgttcaacctttactatttttatccgatgtgggacatataactcacacttgt 37556112  T
Q  100 acacaa 105  Q
    ||||||    
T  37556111 acacaa 37556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 41142467 - 41142370
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||| ||| ||||||| ||||||| ||||| ||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||||    
T  41142467 aaaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcaca 41142370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1188647 - 1188751
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| |||  |||||||||||||| ||| ||| |||||||| || ||||||||  ||||||||||||||| || | |||||||||||| ||||||    
T  1188647 acccaaaaccttaaagcaatgagtttatgagtcttctcacttataaaatattcaacctccacttttctatccgatatggaacatataactcacacttgca 1188746  T
Q  101 cacaa 105  Q
    |||||    
T  1188747 cacaa 1188751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 31767220 - 31767324
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||| |  ||| ||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | |||||||| ||| ||||||    
T  31767220 acccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtggaacatataacccacacttgca 31767319  T
Q  101 cacaa 105  Q
    |||||    
T  31767320 cacaa 31767324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41157090 - 41156986
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||| | ||   ||||||| |||| ||||||    
T  41157090 acccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgttatgggacatataattcacacttgca 41156991  T
Q  101 cacaa 105  Q
    |||||    
T  41156990 cacaa 41156986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 105
Target Start/End: Complemental strand, 44685551 - 44685451
Alignment:
Q  6 aaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaa-cctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    |||| ||| ||||||||||||||  ||||||||||||||||| | ||||| |||||||||||||||||||| ||   |||||||||||| ||||||||||    
T  44685551 aaacattaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 44685452  T
Q  105 a 105  Q
    |    
T  44685451 a 44685451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 50052082 - 50052174
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||||||| |  |||  ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||   ||||||||||||    
T  50052082 acccaaaactttaagaaaataggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcac 50052174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 32594775 - 32594874
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||||||||||| ||||||||||||||||| ||||||||||||||| || |||| |||||    |||||||||||| ||||||    
T  32594775 acccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtaggacatataactcacacttgca 32594874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 66146 - 66252
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttc-aacctttacttttctatccgatgtgaagcat-ataactcacccttg 98  Q
    ||||||||| ||| ||| ||  ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||| || |||||| ||||    
T  66146 acccaaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtgagacatgattactcacacttg 66245  T
Q  99 cacacaa 105  Q
    |||||||    
T  66246 cacacaa 66252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 21378122 - 21378204
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| ||   ||||||||| || |||||||||||    
T  21378122 gtttatgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaa 21378204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 41157460 - 41157370
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||| ||||||||||||||||| |||||||| |||||| || |||| ||||||   |||||||||||| |||||||||||    
T  41157460 ggcaatgggtttatgggtcctcttacttataaggtgttcaacttttactcttttatctgatgtgggacatataactcacacttgcacacaa 41157370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 3537228 - 3537305
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  3537228 gtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 3537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30630697 - 30630798
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||||||| ||||||| ||||||| || |||||||||||||  |||  |||||||| |||| ||||||||||||  ||||||| |||| ||||||    
T  30630697 acccaaaactttaaggcaatgtgtttatgggttctcttacttataaagtgtcaaacctttaattttttatccgatgtgagacatataaatcacacttgca 30630796  T
Q  101 ca 102  Q
    ||    
T  30630797 ca 30630798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 40082505 - 40082402
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||||||| ||||||  |||||||||||||||| ||||||||||||||| || ||||||||||    |||||||||||| |||||     
T  40082505 acccaaaaccttaaggcaatgaatttatga-tcctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcg 40082407  T
Q  101 cacaa 105  Q
    |||||    
T  40082406 cacaa 40082402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 24132049 - 24132136
Alignment:
Q  6 aaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    |||| ||| |||||||||||||||  ||| |||| ||||||| |||||||||||||||||||||||||||| |   ||||||||||||    
T  24132049 aaaccttaaggcaatgagtttatggatccccttatttataaggtgttcaacctttacttttctatccgatgagggacatataactcac 24132136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 45084457 - 45084378
Alignment:
Q  25 ttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    ||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    ||||||||||| ||||||||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 29798284 - 29798194
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||| ||||    |||||||||||| |||||| ||||    
T  29798284 ggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatccaatgtaggacatataactcacacttgcatacaa 29798194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 48588547 - 48588623
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 77  Q
    ||||||||| ||| |||||||| |||| | ||| ||||||||||||| ||||||||||||||| || ||||||||||    
T  48588547 acccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacctttactattttatccgatgt 48588623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14318966 - 14318875
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 92  Q
    ||||||||| ||| ||||||   |||||| ||| ||||||||||||| ||||||||||||||| || ||||||| ||| | |||||||||||    
T  14318966 acccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaacctttactattttatccgacgtggaacatataactca 14318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 41759582 - 41759483
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||||||  ||||||  || ||||||||||||| |||||||| |||||| || |||||||||||   |||||||||||| ||||||    
T  41759582 acccaaaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaacttttactattttatccgatgtgtgacatataactcacacttgca 41759483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 19283516 - 19283618
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||| ||| ||| ||||||||||||||||||| | ||| ||  || |||||||  ||||||||||||| ||||   |||||||||||| ||||||||    
T  19283516 ccaaaaccttaaggcgatgagtttatgtgtcctctcatttacaaagtgctcaacctccacttttctatccggtgtgggacatataactcacacttgcaca 19283615  T
Q  103 caa 105  Q
    |||    
T  19283616 caa 19283618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 37850681 - 37850763
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| || |||||||||||||| |||||||||| |||| || ||| |||||||   |||||||||||| |||||||||||    
T  37850681 gtttatgggttctcttacttataaggtgttcaacctctactgttttatgcgatgtgggacatataactcacacttgcacacaa 37850763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3537658 - 3537735
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||| ||| | ||||| ||||||  ||||||||||| ||||| ||||||||||||||| || |||||||||||    
T  3537658 acccaaaaccttaagccaatgggtttataggtcctcttactcataaggtgttcaacctttactattttatccgatgtg 3537735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 1187440 - 1187528
Alignment:
Q  18 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaat 106  Q
    |||||||||||| ||| ||| |||||||| ||||| |||||  |||||| ||| ||||||||  ||||||| |||| ||||||||||||    
T  1187440 aatgagtttatgggtcttctcacttataaaatgtttaacctccacttttatattcgatgtgagacatataattcacacttgcacacaat 1187528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 5575173 - 5575130
Alignment:
Q  31 gtcctcttacttataagatgttcaacctttacttttctatccga 74  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||    
T  5575173 gtcctcttacttataaggtgttcaacctttactcttctatccga 5575130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 11977379 - 11977276
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||| |  ||||||| || |||||||||||||| |||||||| |||||| || || ||||||||   |||||||||||| |||| |    
T  11977379 acccaaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaacatttactgttttacccgatgtgggacatataactcacacttgta 11977280  T
Q  101 caca 104  Q
    ||||    
T  11977279 caca 11977276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 4878876 - 4878798
Alignment:
Q  27 atgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||| |||| |||||||| |||||||| ||| ||| || ||||||||||| | ||||||||||||  ||||||||||    
T  4878876 atgtgttctctcacttataaaatgttcaagcttcactattttatccgatgtggaacatataactcacaattgcacacaa 4878798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 26661957 - 26662061
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||  ||||||| ||| ||| ||||||||| ||||||||||||||| || |||| ||| ||    ||||||||||| |||| |    
T  26661957 acccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttactcttttatctgatatgggatatataactcacacttgta 26662056  T
Q  101 cacaa 105  Q
    |||||    
T  26662057 cacaa 26662061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 22793360 - 22793273
Alignment:
Q  18 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||| |||||||  |||||| ||||||||  | |||||||| ||||||||||| |||||||   |||||||||||| ||||| |||||    
T  22793360 aatgggtttatggatcctctcacttataaagttttcaacctctacttttctatacgatgtgggacatataactcacacttgctcacaa 22793273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 34649499 - 34649440
Alignment:
Q  39 acttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    ||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||    
T  34649499 acttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttg 34649440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9956008 - 9955942
Alignment:
Q  1 acccaaaactttagggcaatgagttta-tgtgtcctcttacttataagatgttcaacctttactttt 66  Q
    ||||||||| ||| ||||||  ||||| || ||||||||||||||||  ||||||||||||||||||    
T  9956008 acccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctttactttt 9955942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38804414 - 38804491
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||| ||| ||  ||| |||||||  |||||||||||||||  ||||||||||||||| || ||| |||||||    
T  38804414 acccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaacctttactcttttattcgatgtg 38804491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 24448360 - 24448272
Alignment:
Q  17 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||| | ||||| |||||||| ||||||||| |  |||||||| |  |||||  | ||||||||| || |||||||||||    
T  24448360 caatgagtttatgagccctctcacttataaaatgttcaacttccacttttctttgagatgtctaacatataacttacacttgcacacaa 24448272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 3244508 - 3244612
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  3244508 acccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgagacatataactcacacttgca 3244607  T
Q  101 cacaa 105  Q
    |||||    
T  3244608 cacaa 3244612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25483435 - 25483331
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| |||||||  |||||||||||||||||||||||||||||||| || ||||||||||||  |||||||||||| ||||||    
T  25483435 acccaaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttactattttatccgatgtgagacatataactcacacttgca 25483336  T
Q  101 cacaa 105  Q
    |||||    
T  25483335 cacaa 25483331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 36629336 - 36629232
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||| |||| ||| |||||||||||||||||||||   |||||||||||| |||| |    
T  36629336 acccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttctatccgatgtgggacatataactcacacttgaa 36629237  T
Q  101 cacaa 105  Q
    |||||    
T  36629236 cacaa 36629232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4955374 - 4955478
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||| ||| || |||||||| |||  |||||||||||| ||||||    
T  4955374 acccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaaccttaactattttatccgatatgagacatataactcacacttgca 4955473  T
Q  101 cacaa 105  Q
    |||||    
T  4955474 cacaa 4955478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 52884985 - 52884882
Alignment:
Q  2 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcac 101  Q
    |||||||| ||| ||||||| |||||||  |||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||||||    
T  52884985 cccaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcac 52884886  T
Q  102 acaa 105  Q
    ||||    
T  52884885 acaa 52884882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 54741260 - 54741339
Alignment:
Q  26 tatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| |||| |||||||||||    
T  54741260 tatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataattcacacttgcacacaa 54741339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 10246018 - 10245915
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||  || ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||  ||||||||||||| ||||||    
T  10246018 acccaaaaccttaaggctttgggtttatg-gtcctcttacttataaggtgttcaacctttactcttttatccgatgtggggcatataactcacacttgca 10245920  T
Q  101 cacaa 105  Q
    |||||    
T  10245919 cacaa 10245915  T

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Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 32941180 - 32941284
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| | ||||||| ||||||| ||||||||||||||| |||| |||||||| |  |||||||||||| ||||||    
T  32941180 acccaaaaccttaaggcaatgagtttatgagccctcttatttataaggtgttcaacctttactgttctttccgatgtaagacatataactcacacttgca 32941279  T
Q  101 cacaa 105  Q
     ||||    
T  32941280 gacaa 32941284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 34646706 - 34646810
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| ||||||||| ||||||| |||||||| |||||| || |||||||||||   |||||||||||| |||| |    
T  34646706 acccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgta 34646805  T
Q  101 cacaa 105  Q
    |||||    
T  34646806 cacaa 34646810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 55933181 - 55933280
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||| ||||| || ||||||||||    |||||||||||| ||||||    
T  55933181 acccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacccttactattttatccgatgtaggacatataactcacacttgca 55933280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 2740769 - 2740695
Alignment:
Q  31 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||   |||||||||||| |||||||||||    
T  2740769 gtcctcttacttataaggtgttcaacctttactgttctatccgatgtgggacatataactcacacttgcacacaa 2740695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16889593 - 16889691
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgc 99  Q
    ||||||||||||| |||| |  |||||||  |||||||||||||||| | ||||||||||||||||||||||||| |||  |||||||||||| |||||    
T  16889593 acccaaaactttaaggcagtaggtttatgaatcctcttacttataaggtattcaacctttacttttctatccgatttgagacatataactcacacttgc 16889691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 54017656 - 54017754
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacac 103  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||| || |||   |||||||||||| |||||||||    
T  54017656 aaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgacgtgggacatataactcacacttgcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44621101 - 44621024
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||| ||| | ||||||||||||||| ||||||||||||||| ||||||||||||||| || |||||||||||    
T  44621101 acccaaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttcaacctttactgttttatccgatgtg 44621024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1731704 - 1731808
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||  ||||||| ||||||||| ||||||||||||||||||||||| || |||| ||||||   ||||||||||||  |||||    
T  1731704 acccaaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttactgttttatctgatgtgggacatataactcacatttgca 1731803  T
Q  101 cacaa 105  Q
    |||||    
T  1731804 cacaa 1731808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 39792917 - 39793021
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||| |  ||||||| |||||||| |||||||| |||||||||||||| ||||||   |||||||||||| |||| |    
T  39792917 acccaaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaacatttacttttctatctgatgtgggacatataactcacacttgta 39793016  T
Q  101 cacaa 105  Q
    |||||    
T  39793017 cacaa 39793021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 23556925 - 23557024
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||||||| |||||||| ||||||  | |||||| |||||| |||||||||||  ||||||||||||||||| || ||| |||||||| ||||||||    
T  23556925 ccaaaactttaaggcaatgattttatggattctcttatttataaaatgttcaacctccacttttctatccgatgtaaaacatttaactcacacttgcaca 23557024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 41370456 - 41370357
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||| | |||||| |||||| || |||||||| ||   |||||||||||| ||||||    
T  41370456 acccaaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttactattttatccgatttgggacatataactcacacttgca 41370357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 43174584 - 43174501
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttact-tttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||||  ||||||||||||| |||| ||||||    
T  43174584 gtttatgtgtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtggcatataactcacacttgtacacaa 43174501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 49076510 - 49076609
Alignment:
Q  6 aaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||| | ||||| ||||||  ||||||||||||||||| ||||||||||||||| || |||||||| ||   |||||||||||| |||||||||||    
T  49076510 aaactttaagacaatgggtttataggtcctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaa 49076609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 50459803 - 50459728
Alignment:
Q  18 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| || || |||||||| | ||||||||||||    
T  50459803 aatgggtttatgagtcctcttacttataagatgttcaacctttactcttttaaccgatgtggaacatataactcac 50459728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 50630812 - 50630911
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||| || ||||||||||    |||||||||||| ||||||    
T  50630812 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactattttatccgatgtaggacatataactcacgcttgca 50630911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 52884793 - 52884690
Alignment:
Q  2 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcac 101  Q
    |||||||| ||| ||||||| ||||||   || ||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||||||    
T  52884793 cccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcac 52884694  T
Q  102 acaa 105  Q
    ||||    
T  52884693 acaa 52884690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 16888889 - 16888971
Alignment:
Q  17 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgc 99  Q
    ||||||||||||  || |||||||||||||| | ||||||||||||||||||||||||||||   |||||||||||| |||||    
T  16888889 caatgagtttataggttctcttacttataaggtattcaacctttacttttctatccgatgtgggacatataactcacacttgc 16888971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 34004658 - 34004747
Alignment:
Q  18 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaatag 108  Q
    |||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||  |||||   |||||||||||| ||||||||||||||    
T  34004658 aatgagtttatgggtcctcttacttataagttgttcaacctttagtttt-tatcatatgtgtgacatataactcacacttgcacacaatag 34004747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 2741170 - 2741069
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||||||   ||||| ||||||||||||||||| | ||||||||||||| ||||||| ||||||   |||||||||||| ||||||    
T  2741170 acccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatataactcacacttgca 2741071  T
Q  101 ca 102  Q
    ||    
T  2741070 ca 2741069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 54109011 - 54108935
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||||| ||| ||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  54109011 acccaaaacttaagg-caatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 54108935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 22028018 - 22028122
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||  ||||||| ||||||||||||||||| ||||||||||||  | || |||||||||||   ||||||| |||| ||||||    
T  22028018 acccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacctttcgtattttatccgatgtgggacatataagtcacacttgca 22028117  T
Q  101 cacaa 105  Q
    |||||    
T  22028118 cacaa 22028122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 49303005 - 49302902
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttactt--ataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||  |||||||||||||||||||||||| |||  ||||||   |||||||||||| |||     
T  49303005 acccaaaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacctttacttttttatttgatgtgggacatataactcacactta 49302906  T
Q  99 caca 102  Q
    ||||    
T  49302905 caca 49302902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 50002525 - 50002421
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | |||||  |||||| ||||||||||||| ||  ||||||||||||||| || ||||||||||||  |||||||||||| ||||||    
T  50002525 acccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacctttactcttttatccgatgtgagacatataactcacacttgca 50002426  T
Q  101 cacaa 105  Q
     ||||    
T  50002425 aacaa 50002421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 49880259 - 49880160
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||| || ||||||| ||||||||||||||||| ||||||||||||||| || ||| | |||||   |||||||||||| ||||||    
T  49880259 acccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtgggacatataactcacacttgca 49880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 10246424 - 10246342
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||| ||||||||||||||||||||||||| || |||||||| |||  ||||||||  || |||||||||||    
T  10246424 gtttatgggtcctctaacttataagatgttcaacctttactcttttatccgatttgagacatataacagacacttgcacacaa 10246342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 22183323 - 22183425
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||| ||| ||||||| ||||||| ||||| ||||||||||  |||||||| |||||| || |||||||||||    ||||||||||| ||||||||    
T  22183323 ccaaaaccttaaggcaatgggtttatgggtccttttacttataaattgttcaacatttactcttttatccgatgtgggatatataactcacacttgcaca 22183422  T
Q  103 caa 105  Q
    |||    
T  22183423 caa 22183425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 41707523 - 41707625
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||| ||| | ||||||||||||| || || ||||||||| | ||||||||||||||| || |||||||||||   |||||||||||| |||| |||    
T  41707523 ccaaaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtaca 41707622  T
Q  103 caa 105  Q
    |||    
T  41707623 caa 41707625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 44620452 - 44620362
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactc 91  Q
    ||||||||| ||| ||||||| ||||||| |  |||||| ||||||| ||||||||||||||| || ||||||||||| | ||||||||||    
T  44620452 acccaaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttcaacctttactgttttatccgatgtggaacatataactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 6975536 - 6975605
Alignment:
Q  24 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    |||||| ||||||||||||||||||| ||||||||||||| || |||| |||||||  ||||||||||||    
T  6975536 tttatgagtcctcttacttataagatattcaacctttactattttatcggatgtgagacatataactcac 6975605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 45496904 - 45496827
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||| ||| | ||||||||||||  ||||||||||||||||| ||||||||||||||  || |||||||||||    
T  45496904 acccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatccgatgtg 45496827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 54936295 - 54936218
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||| ||| ||||||||||||||| || |||| ||||||    
T  54936295 acccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtg 54936218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3340906 - 3340802
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||| || ||||||| ||||||||||||||||| || |||||||||||| ||  ||| |||| |   |||||||||||| ||||||    
T  3340906 acccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacctttactctttcatctgatgcgggacatataactcacacttgca 3340807  T
Q  101 cacaa 105  Q
    |||||    
T  3340806 cacaa 3340802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 36572118 - 36572014
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||||||  |||||| ||| ||||||||||||| |||||||| |||||| || ||| |||||||   |||||||||||| |||| |    
T  36572118 acccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactcttttattcgatgtgggacatataactcacacttgta 36572019  T
Q  101 cacaa 105  Q
    |||||    
T  36572018 cacaa 36572014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 39404496 - 39404393
Alignment:
Q  2 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcac 101  Q
    |||||||| ||| ||| ||  ||||||| ||||||||||||||||| ||||| ||||||||| || |||| ||||||   |||||||||||| |||| ||    
T  39404496 cccaaaaccttaaggctataggtttatgggtcctcttacttataaggtgttccacctttactcttttatctgatgtgggacatataactcacacttgtac 39404397  T
Q  102 acaa 105  Q
    ||||    
T  39404396 acaa 39404393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 20825913 - 20825843
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||| || |||||| ||||||| ||||||||||||||| || ||||||||||| | ||||||||||||    
T  20825913 gtttatgggtgctcttatttataaggtgttcaacctttactcttttatccgatgtggaacatataactcac 20825843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 44620737 - 44620655
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||||||||||||  |||||||||| |||| ||  ||||||||||   |||||||||||| |||||||||||    
T  44620737 gtttatgggtcctcttacttataaagtgttcaacctctactatttcatccgatgtgggacatataactcacacttgcacacaa 44620655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22028426 - 22028491
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttactttt 66  Q
    ||||||||| ||| | ||||||||||||| ||||||||||| ||||| ||||||||||||| ||||    
T  22028426 acccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaacctttattttt 22028491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 3341203 - 3341123
Alignment:
Q  25 ttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||| ||||||||||||||||  |||| |||||||||| || ||||| |||||   |||||||||||| |||||||||||    
T  3341203 ttatgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatataactcacacttgcacacaa 3341123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 18932810 - 18932882
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 77  Q
    ||||| ||| ||||||| ||||||| ||||||||| ||||||| | ||||||||||||| || ||||||||||    
T  18932810 aaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattcaacctttactattttatccgatgt 18932882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36608718 - 36608822
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | |||||  ||||||  ||||||||||||| || |||||||| |||||| || ||||||||||    |||||||||||| ||||||    
T  36608718 acccaaaaccttaagacaatggatttatggatcctcttacttatgaggtgttcaacttttactcttttatccgatgttggacatataactcacacttgca 36608817  T
Q  101 cacaa 105  Q
    |||||    
T  36608818 cacaa 36608822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 39404117 - 39404013
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| |||  || ||||||||||| ||||||||||||||||  ||||||||||||||| || ||| | ||||    |||||||||||| |||| |    
T  39404117 acccaaaaccttaatgctatgagtttatgagtcctcttacttataaagtgttcaacctttactcttttattcaatgtaggacatataactcacacttgta 39404018  T
Q  101 cacaa 105  Q
    |||||    
T  39404017 cacaa 39404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 51768117 - 51768221
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||||||||||| ||||||||| ||||||| |||||||| |||||| || ||| |||| |    ||||||||||||  |||||    
T  51768117 acccaaaaccttaagacaatgagtttatgagtcctcttatttataaggtgttcaacatttactcttatattcgatataggacatataactcacatttgca 51768216  T
Q  101 cacaa 105  Q
    |||||    
T  51768217 cacaa 51768221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 54017784 - 54017836
Alignment:
Q  26 tatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    |||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  54017784 tatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtg 54017836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 45489421 - 45489492
Alignment:
Q  34 ctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||||||| | ||||||||||||||| || ||||||||||||  ||||||| |||| |||| ||||||    
T  45489421 ctcttacttatatggtgttcaacctttactcttttatccgatgtgagacatataattcacacttgtacacaa 45489492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 54343088 - 54343135
Alignment:
Q  31 gtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  54343088 gtcctcttacttataaggtgttcaacctttactattttatccgatgtg 54343135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 3700434 - 3700360
Alignment:
Q  31 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||| ||||||||||| |||||||| |||||| || ||||||||||    |||||||||||| |||||||||||    
T  3700434 gtccttttacttataaggtgttcaacatttactcttttatccgatgtaggacatataactcacacttgcacacaa 3700360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31691251 - 31691205
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataag 47  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  31691251 acccaaaaccttaaggcaatgagtttatgggtcctcttacttataag 31691205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 4390189 - 4390262
Alignment:
Q  32 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||||||||||| ||||||||||||||| || |||| ||||||    || |||||||| |||||||||||    
T  4390189 tcctcttacttataaggtgttcaacctttactcttttatctgatgtgggatatgtaactcacacttgcacacaa 4390262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 28034313 - 28034224
Alignment:
Q  16 gcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||| |||||||| || |||| ||||||||  ||||||||||  |||||||||||||||| |   ||||||| |||| |||||||||||    
T  28034313 gcaataagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgcgggacatataattcacacttgcacacaa 28034224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 49076888 - 49076991
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||  ||| ||||||| || |||||||| ||||| ||||||||||||||| || || || || || | |||||||||||| ||||||    
T  49076888 acccaaaaccttaaggttatgggtttatgggttctcttact-ataaggtgttcaacctttactattttagccaatatggaacatataactcacacttgca 49076986  T
Q  101 cacaa 105  Q
    |||||    
T  49076987 cacaa 49076991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 39699034 - 39699077
Alignment:
Q  32 tcctcttacttataagatgttcaacctttacttttctatccgat 75  Q
    |||||||||||| || ||||||||||||||||||| ||||||||    
T  39699034 tcctcttacttagaatatgttcaacctttacttttatatccgat 39699077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 44621492 - 44621421
Alignment:
Q  34 ctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||||||||| |||| |||||||||| || ||||| ||||    |||||||||||| |||||||||||    
T  44621492 ctcttacttataaggtgtttaacctttactgttttatcccatgttggacatataactcacacttgcacacaa 44621421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 760274 - 760196
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||||||||| ||||||| ||||||||  |  |||||||| | |||||||| |||||||   ||||||||||||    
T  760274 ggcaatgagtttatgggtcctctcacttataaagttctcaaccttcatttttctattcgatgtgggacatataactcac 760196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 20826294 - 20826224
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||| || |||||||||||||  |||||||| |||||| || |||||||||||   ||||||||||||    
T  20826294 gtttatgggttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatataactcac 20826224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 34544201 - 34544127
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 79  Q
    ||||| ||| ||||||||||||||| ||||||| | ||||||  || |||||||  |||||||||| ||||||||    
T  34544201 aaaaccttaaggcaatgagtttatgggtcctctcatttataaagtgatcaacctccacttttctattcgatgtga 34544127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 44620362 - 44620304
Alignment:
Q  34 ctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 92  Q
    |||||||||||||| ||||||||||||||| || ||||| |||||   |||||||||||    
T  44620362 ctcttacttataaggtgttcaacctttactattttatcccatgtgggacatataactca 44620304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 54108634 - 54108564
Alignment:
Q  3 ccaaaactttagggcaatgagttt-atgtgtcctcttacttataagatgttcaacctttacttttctatcc 72  Q
    ||||||| ||| |||||||| ||| ||| ||||| ||||||||||| ||||||||||||||| || |||||    
T  54108634 ccaaaaccttaaggcaatgaattttatgggtccttttacttataaggtgttcaacctttactattttatcc 54108564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23817738 - 23817783
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataa 46  Q
    ||||||||| ||| |||||||||||||||  |||||||||||||||    
T  23817738 acccaaaaccttaaggcaatgagtttatgaatcctcttacttataa 23817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 28254296 - 28254400
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||| || |||    
T  28254296 acccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgggacatataagtcacactggca 28254395  T
Q  101 cacaa 105  Q
    |||||    
T  28254396 cacaa 28254400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15880362 - 15880258
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | |||||||||||| |||| |    
T  15880362 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacacttgta 15880263  T
Q  101 cacaa 105  Q
    |||||    
T  15880262 cacaa 15880258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 28531373 - 28531477
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||  ||| ||||||||||||||| | ||||||||||||||| |||||||||||| |||||||||||||||||   |||||||||||| ||||||    
T  28531373 acccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataactcacacttgca 28531472  T
Q  101 cacaa 105  Q
    |||||    
T  28531473 cacaa 28531477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 962697 - 962593
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||   |||||||||||| ||||||    
T  962697 acccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgca 962598  T
Q  101 cacaa 105  Q
     ||||    
T  962597 tacaa 962593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36178664 - 36178763
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  36178664 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 36178763  T

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Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 31899499 - 31899589
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||| | |||||||||||| ||| |||||||    
T  31899499 ggcaatgagtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaa 31899589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 6421484 - 6421387
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    ||||||||| | | ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||    
T  6421484 acccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttg 6421387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36005939 - 36006042
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||| |||||||   |||||||||||| |||| |    
T  36005939 acccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacttttac-tttctattcgatgtgggacatataactcacacttgta 36006037  T
Q  101 cacaa 105  Q
    |||||    
T  36006038 cacaa 36006042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 14745726 - 14745825
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||| |||||   |||||||||||| ||||||    
T  14745726 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacacttgca 14745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 37106287 - 37106188
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  37106287 acccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 37106188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 41283538 - 41283633
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||| ||   |||||||||||| ||||||    
T  41283538 aaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatatgggacatataactcacacttgca 41283633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7598327 - 7598225
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||| ||||||||||| ||||||||| ||||||| |||| ||||||||||||||||| ||||||  | ||||||| |||| ||||||    
T  7598327 acccaaaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaacctttacttttctattcgatgtagaacatataattcacacttgca 7598228  T
Q  101 cac 103  Q
    |||    
T  7598227 cac 7598225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28254171 - 28254249
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 79  Q
    |||| |||||||| ||||| | ||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  28254171 accctaaactttaaggcaaagtgtttatgagtcctcttacttataaagtgttcaacctttacttttctatccgatgtga 28254249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 1769973 - 1769889
Alignment:
Q  19 atgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacac 103  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||| || |||||||||||   |||||||||||| |||||||||    
T  1769973 atgagtttatgagtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30313276 - 30313173
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||  ||| |||||||||||| || ||||||| ||||||||| ||||||||||  |||||||||||||||||||  |||||||| ||| ||||||    
T  30313276 acccaaaatcttaaggcaatgagtttttgggtcctctcacttataag-tgttcaacctccacttttctatccgatgtgagacatataacacacgcttgca 30313178  T
Q  101 cacaa 105  Q
    |||||    
T  30313177 cacaa 30313173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 33561510 - 33561614
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||||||||||| ||||||| ||||||||  |||| |||||  ||||||||||| |||||| | |||||||||||| ||||||    
T  33561510 acccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatgtggaacatataactcacacttgca 33561609  T
Q  101 cacaa 105  Q
    |||||    
T  33561610 cacaa 33561614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 42514748 - 42514644
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||  ||| ||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||    |||||||||||| ||||||    
T  42514748 acccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatctgatgtaggacatataactcacacttgca 42514649  T
Q  101 cacaa 105  Q
     ||||    
T  42514648 tacaa 42514644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 31468809 - 31468909
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| |||||||||    |||||| ||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  31468809 acccaaaaccttaaggcaatgagtttatgggtcctctta----taagatattcaacctttactattttatccgatgtgggacatataactcacacttgca 31468904  T
Q  101 cacaa 105  Q
    |||||    
T  31468905 cacaa 31468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 37106023 - 37105924
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||  ||| ||||||||||||||| |||| |||||||||||| ||||||||||||||| || ||| |||||||   |||||||||||| ||||||    
T  37106023 acccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaacctttactattttattcgatgtgggacatataactcacacttgca 37105924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 7598684 - 7598606
Alignment:
Q  25 ttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacac 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||| ||||||   |||||||||||| |||||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaacctttacttttttatctgatgtgggacatataactcacacttgcacac 7598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 16542534 - 16542444
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||||  ||||||||| ||||||| ||||||||||||||| || |||||||||||   | |||||||||| |||||||||||    
T  16542534 ggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacttataactcacacttgcacacaa 16542444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 29873599 - 29873700
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacac 103  Q
    |||||| ||| ||||||||||||||| ||||||  |||||||| |||||||||||  ||||||||||| ||||||   ||| |||| |||||||||||||    
T  29873599 caaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttcaacctccacttttctatctgatgtgggacatgtaacacacccttgcacac 29873698  T
Q  104 aa 105  Q
    ||    
T  29873699 aa 29873700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 35580783 - 35580886
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||| ||||||||| |||||||| |||| | || |||||||||||   |||||||||||| ||||||    
T  35580783 acccaaaaccttaaggcaatgggtttatg-gtcctctcacttataaggtgttcaacatttattgttttatccgatgtgggacatataactcacacttgca 35580881  T
Q  101 cacaa 105  Q
    |||||    
T  35580882 cacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 38796679 - 38796783
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||| |  ||||||| ||||||||||||||||| ||||||||||||| | || |||| ||||||   |||||||||||| ||||||    
T  38796679 acccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacctttattgttttatcagatgtgggacatataactcacacttgca 38796778  T
Q  101 cacaa 105  Q
    |||||    
T  38796779 cacaa 38796783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 40679688 - 40679792
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||  ||| ||| ||| ||||||| || |||||||||||||| ||||||||| ||||||||||||||||| ||   ||||||||||||  |||||    
T  40679688 acccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacccttacttttctatccgatatgggacatataactcacatttgca 40679787  T
Q  101 cacaa 105  Q
    |||||    
T  40679788 cacaa 40679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 40733594 - 40733510
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaata 107  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||| |||| ||||||   |||||||||||| |||| ||||||||    
T  40733594 gtttatgggtcctcttacttataaggtgttcaacatttacttttttatctgatgtgggacatataactcacacttgtacacaata 40733510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 6713053 - 6712978
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    ||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||||  |||||||||||| ||||    
T  6713053 gtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgagacatataactcacacttg 6712978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 38796307 - 38796381
Alignment:
Q  31 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||||||| |||||||| |||||| || |||||||||||   |||||||||||| |||||||||||    
T  38796307 gtcctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaa 38796381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 12529091 - 12529191
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    ||||||||| ||||||||||||||| ||||||||||||||| | ||||||| ||||||| || |||  |||||    |||||||||||| |||||| |||    
T  12529091 aaaactttaaggcaatgagtttatgagtcctcttacttatacggtgttcaatctttactgttttatttgatgtaggacatataactcacacttgcataca 12529190  T
Q  105 a 105  Q
    |    
T  12529191 a 12529191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 14745353 - 14745445
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||| ||| ||||||| ||||||| |||||| |||||| ||||||||||||| ||||| || ||| |||||||   ||||||||||||    
T  14745353 acccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtgggacatataactcac 14745445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33731747 - 33731655
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||| ||| ||||||  |||||||  |||||||||||||||| || |||||||||||| || ||||||||||||   |||||||||||    
T  33731747 acccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctcaacctttactcttttatccgatgtgagatatataactcac 33731655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 37895120 - 37895224
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| |||||||||| || |||||| |||| | |||||| |||| ||||||||||||||||   |||||||||||  || |||    
T  37895120 acccaaaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaacttttatttttctatccgatgtgggacatataactcaaactcgca 37895219  T
Q  101 cacaa 105  Q
    |||||    
T  37895220 cacaa 37895224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 5542688 - 5542783
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||| ||| ||||||  ||||||| ||||||||||||||||| ||||||||||||||| || ||| |||| ||   |||||||||||| ||||||    
T  5542688 aaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattttattcgatatgggacatataactcacacttgca 5542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 5543057 - 5543156
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||  ||| ||||||  |||||||  |||||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| ||||||    
T  5543057 acccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactcacacttgca 5543156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36178328 - 36178427
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||| ||||||| |||| |||||||||||| ||||| ||||||||| || ||||||| |||   |||||||||||| ||||||    
T  36178328 acccaaaaccttaagacaatgggtttatgagtccccttacttataaggtgttccacctttactattttatccgaagtgggacatataactcacacttgca 36178427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 40163466 - 40163509
Alignment:
Q  35 tcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  40163466 tcttacttataaggtgttcaacctttacttttctatccgatgtg 40163509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 9231346 - 9231244
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||||||| |||  || ||| |||  |||||||| |||||| |||||||||||||||||||||||| ||| |||  |||||||||||  ||| ||||    
T  9231346 ccaaaactttaaggcggtgggttgatggatcctcttatttataatatgttcaacctttacttttctatctgatatgagacatataactcatacttacaca 9231247  T
Q  103 caa 105  Q
    |||    
T  9231246 caa 9231244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 37632678 - 37632760
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| |||||||||||||||| ||||  |||||||||| || ||||||||||    |||||||||||| |||||||||||    
T  37632678 gtttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactcacacttgcacacaa 37632760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 15511570 - 15511656
Alignment:
Q  17 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||| ||||||| ||||||||||||||||  ||||||||||||||| || |||||| ||||   |||||||||||  |||||||||||    
T  15511570 caatgggtttatgggtcctcttacttataacgtgttcaacctttactcttttatccgttgtgtgacatataactca--cttgcacacaa 15511656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36178230 - 36178307
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||  ||| ||||||| ||||||| || | |||||||||||| ||||||||||||||| || |||||||||||    
T  36178230 acccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaacctttactattttatccgatgtg 36178307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 36785664 - 36785726
Alignment:
Q  43 ataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||| ||||||||||||||| || |||||||||||   |||||||||||| |||||||||||    
T  36785664 ataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaa 36785726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 6422205 - 6422132
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||| ||| ||| ||| ||||||| ||||||||| ||||||  |||||||||||||||||| |||| ||||||    
T  6422205 aaaaccttaaggctatgggtttatgggtcctcttaattataatgtgttcaacctttacttttttatctgatgtg 6422132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 29676620 - 29676543
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 92  Q
    ||||||||||||||| || |||| ||||||||  ||||||| ||||||| || ||||| ||||||  |||||||||||    
T  29676620 ggcaatgagtttatgggttctctcacttataatgtgttcaatctttactcttttatccaatgtgagacatataactca 29676543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 12910327 - 12910223
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | |||||| |||||  ||| | | |||||||||  ||||||||| |||||||| |||||||||| | |||||||||||  ||| ||    
T  12910327 acccaaaaccttaagacaatgaatttataagtcatttcacttataaggggttcaacctgtacttttccatccgatgtggaacatataactcaaacttaca 12910228  T
Q  101 cacaa 105  Q
    |||||    
T  12910227 cacaa 12910223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30323563 - 30323459
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||  ||||||| |||| |||  ||||||||||  | ||||||||| ||| ||   |||||||| ||| ||||||    
T  30323563 acccaaaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttcaacctccaattttctatctgatttgggacatataacacacacttgca 30323464  T
Q  101 cacaa 105  Q
    |||||    
T  30323463 cacaa 30323459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 37894765 - 37894857
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaata 107  Q
    |||||||  |||||| ||| ||||||||||||| | || | ||||||||||||||| | |||||   ||||||||||||  ||||||||||||    
T  37894765 ggcaatggatttatgagtcttcttacttataaggtttttagcctttacttttctattcaatgtgggacatataactcacatttgcacacaata 37894857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 42515078 - 42515038
Alignment:
Q  38 tacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  42515078 tacttataaggtgtttaacctttacttttctatccgatgtg 42515038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 23346331 - 23346230
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagc--atataactcacccttgcaca 102  Q
    ||||| ||| ||| ||| ||||||| | ||||||| ||||||| |||| ||||||||||||||||| ||||||||  |  ||||||||||| || |||||    
T  23346331 aaaaccttaaggctatgggtttatgggccctctta-ttataaggtgtttaacctttacttttctatacgatgtgagacatatataactcacactcgcaca 23346233  T
Q  103 caa 105  Q
    |||    
T  23346232 caa 23346230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 40733950 - 40733876
Alignment:
Q  33 cctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaata 107  Q
    ||||||||||||||| |||| || ||||||| || ||| |||||||   |||||||||||| |||| ||||||||    
T  40733950 cctcttacttataaggtgttaaatctttactcttttattcgatgtgggacatataactcacacttgtacacaata 40733876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 29676971 - 29676898
Alignment:
Q  32 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||| || |||||| |||| |||||||||| || |||||||||||   |||||||||||| | |||||||||    
T  29676971 tcctctcacctataaggtgttaaacctttactcttttatccgatgtgggacatataactcacacctgcacacaa 29676898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 29874084 - 29874185
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||| ||| ||||||| ||||||| ||||||  | ||||||  ||||||||||  ||||||||||| ||||||   |||||||| ||| |||| |||    
T  29874084 ccaaaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaacctccacttttctatctgatgtgggacatataacacacacttgtaca 29874183  T
Q  103 ca 104  Q
    ||    
T  29874184 ca 29874185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 31259697 - 31259750
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatg 76  Q
    ||||||| ||| ||||||||||||| |||| |||||||||| || |||||||||    
T  31259697 gtttatgggtcatcttacttataaggtgttgaacctttactcttttatccgatg 31259750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 33953830 - 33953934
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    |||||||| |||| |||||   ||||||| ||||||| |||||||   ||||||||||  ||||||||||| ||||||   | ||||||||||  |||||    
T  33953830 acccaaaattttaaggcaacaggtttatgggtcctctcacttatatagtgttcaacctccacttttctatctgatgtgggacttataactcacatttgca 33953929  T
Q  101 cacaa 105  Q
    |||||    
T  33953930 cacaa 33953934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 10074050 - 10074154
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    ||||||||||||||||||    
T  10074050 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatgtgggatatataactcacccttgca 10074149  T
Q  101 cacaa 105  Q
    |||||    
T  10074150 cacaa 10074154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 10074422 - 10074526
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||   | | |||||||| ||||||    
T  10074422 acccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggacctctaactcacacttgca 10074521  T
Q  101 cacaa 105  Q
    |||||    
T  10074522 cacaa 10074526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 16107777 - 16107673
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||  |||||||||||| |||| |    
T  16107777 acccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaacctttacttttttatccgatgtgacacatataactcacacttgta 16107678  T
Q  101 cacaa 105  Q
    |||||    
T  16107677 cacaa 16107673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3409358 - 3409259
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| ||||||    
T  3409358 acccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgca 3409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 35210303 - 35210204
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||||||  |||||| ||||||||||||||||| ||||||||||||||| || ||||||||||||  |||||||||||| ||||||    
T  35210303 acccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacacttgca 35210204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 9062424 - 9062500
Alignment:
Q  17 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||   ||||||||||||    
T  9062424 caatgagtttatgagtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcac 9062500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 14748397 - 14748496
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| |||  |||||||||||||| ||||||||| ||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  14748397 acccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 14748496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 29518602 - 29518503
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  29518602 acccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 29518503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 29519019 - 29518920
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  29519019 acccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 29518920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 32741278 - 32741179
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  32741278 acccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 32741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 10911662 - 10911600
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttactttt 66  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  10911662 caaaactttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttt 10911600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 2377853 - 2377756
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || || ||||||||   |||||||||||| ||||    
T  2377853 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactcacacttg 2377756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 2843654 - 2843561
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtg-tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||| ||| ||||||||||||||| | |||||||||||||||| |||||||| |||| | || ||||||||||||| ||||||||||||    
T  2843654 acccaaaaccttaaggcaatgagtttatggggtcctcttacttataaggtgttcaacttttattattttatccgatgtgaaacatataactcac 2843561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 5958663 - 5958764
Alignment:
Q  2 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcac 101  Q
    |||||||||||| | ||||||||||||| || |||||| ||||||| ||||||||||||||| || |||||||||| |  ||||||||||||  ||||||    
T  5958663 cccaaaactttaagacaatgagtttatgagttctcttatttataaggtgttcaacctttactgttttatccgatgtaacacatataactcacaattgcac 5958762  T
Q  102 ac 103  Q
    ||    
T  5958763 ac 5958764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 2579931 - 2580035
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||  || ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  2579931 acccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttactcttttatccgatgtgggacatataactcacacttgca 2580030  T
Q  101 cacaa 105  Q
    |||||    
T  2580031 cacaa 2580035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 32460639 - 32460731
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||| |||||||   ||||||||||||    
T  32460639 acccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgatgtgggacatataactcac 32460731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 2378221 - 2378126
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  2378221 aaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 2378126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 16108148 - 16108058
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||| ||||||||||||||||| |||||||| |||||| || |||| |||||| | |||||||||||| |||| ||||||    
T  16108148 ggcaatgggtttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaa 16108058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 3409745 - 3409660
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||| || |||| ||||||   |||||||||||| ||||||    
T  3409745 ggcaatgggtttatgggtcctcttacttataagatgttcaacttttactattttatctgatgtggtacatataactcacacttgca 3409660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 10073691 - 10073777
Alignment:
Q  17 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||||||||  |||||||||||||||| |||||||||||||||||||  |||||||||   ||||||||| || |||||||||||    
T  10073691 caatgagtttatggatcctcttacttataaggtgttcaacctttacttttc--tccgatgtgggacatataactaacacttgcacacaa 10073777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 593768 - 593868
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||| |  ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||| ||||||| ||||||    
T  593768 acccaaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaactcacacttgca 593867  T
Q  101 c 101  Q
    |    
T  593868 c 593868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3058325 - 3058226
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| |||||||  ||||| |||||||||| ||||||||||||||| || |||||||||||   ||||||||| || ||||||    
T  3058325 acccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccgatgtgggacatataactaacacttgca 3058226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1127459 - 1127382
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || || ||||||||    
T  1127459 acccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttacccgatgtg 1127382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 1846845 - 1846748
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||| ||| |||||||  |||||| || |||||||||||||| ||||||||||||||| || ||||||||||||  |||| || |||| ||||||    
T  1846845 ccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttactattttatccgatgtgagacatagaattcacacttgca 1846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 12092544 - 12092645
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacac 103  Q
    |||||| ||| |||||||||||||||  |||||| ||||||||  || |||||||  ||||||||||||||||||   ||| |||| |||||||||||||    
T  12092544 caaaaccttaaggcaatgagtttatggatcctctcacttataaagtgctcaacctccacttttctatccgatgtgggacatctaacacacccttgcacac 12092643  T
Q  104 aa 105  Q
    ||    
T  12092644 aa 12092645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 26544126 - 26544049
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  26544126 gtttatgggtcctcttacttataacgtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 26544049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 2578502 - 2578605
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||| ||| ||||||| ||||||||||||||||  ||||||||||||||| || |||||| ||||   |||||||||||| |||| |    
T  2578502 acccaaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccg-tgtgggacatataactcacacttgta 2578600  T
Q  101 cacaa 105  Q
    |||||    
T  2578601 cacaa 2578605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2579551 - 2579643
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||| ||| ||||||||||||||| | ||||||||||||||| | | | |||||||||||| | |||||||||   ||||||||||||    
T  2579551 acccaaaaccttaaggcaatgagtttatgggccctcttacttataaggtatccgacctttacttttttgtccgatgtgggacatataactcac 2579643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16455006 - 16454929
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||| ||| ||||||  ||||||| ||||| ||||||||||| ||||||||||||||| || |||| ||||||    
T  16455006 acccaaaaccttaaggcaataggtttatgggtcctattacttataaggtgttcaacctttactcttttatctgatgtg 16454929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 3415553 - 3415465
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||| | ||||||||||||||| || |||  ||||||   ||||||||||||    
T  3415553 aaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatgtgatgtgggacatataactcac 3415465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 8482025 - 8481922
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||  ||| ||||||||||||||| ||| ||| | ||||||  ||||||||||  |||||| |||| |||||| | |||||||||||| ||||||    
T  8482025 acccaaaatcttaaggcaatgagtttatgagtcatctcatttataaagtgttcaacctccacttttatatctgatgtgga-catataactcacacttgca 8481927  T
Q  101 cacaa 105  Q
    |||||    
T  8481926 cacaa 8481922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 17135144 - 17135220
Alignment:
Q  17 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    |||||||||||||  ||||||| |||||||| | || ||| ||||||| ||||||||||||||  ||||||||||||    
T  17135144 caatgagtttatgaatcctcttgcttataaggtattaaacatttacttctctatccgatgtgagacatataactcac 17135220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 5832108 - 5832162
Alignment:
Q  24 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    |||||| ||||||||||||||||| ||||||||||||||| || ||||| |||||    
T  5832108 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccaatgtg 5832162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 6071217 - 6071127
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||||||||||  || ||| ||||||||  ||||||||||  |||||||||| | |||||   |||||||||||| |||||||||||    
T  6071217 ggcaatgagtttatggatcatctcacttataaagtgttcaacctccacttttctattcaatgtgggacatataactcacacttgcacacaa 6071127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 16454660 - 16454570
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||| ||||||||||||||||| |||||||| |||| | || |||| ||||||   || ||||||||| |||| ||||||    
T  16454660 ggcaatgggtttatgggtcctcttacttataaggtgttcaacttttattcttttatctgatgtgggacacataactcacacttgtacacaa 16454570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 1950275 - 1950336
Alignment:
Q  32 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||||| |||| ||||||||||||||| || |||||||||||   ||||||||||||    
T  1950275 tcctcttacttgtaaggtgttcaacctttactcttttatccgatgtgggacatataactcac 1950336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 2578894 - 2578997
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| || ||||||||||||  |||||||| ||||||| | |||||| ||||||||| ||||||||| |   ||||||| |||| |||||     
T  2578894 acccaaaaccttaaggtaatgagtttatggatcctcttatttataaggtattcaacatttactttt-tatccgatgagggacatataaatcacacttgct 2578992  T
Q  101 cacaa 105  Q
    |||||    
T  2578993 cacaa 2578997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 14789285 - 14789327
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttt 65  Q
    ||||||| |||||||||||| |||| |||||||||||||||||    
T  14789285 gtttatgggtcctcttacttgtaaggtgttcaacctttacttt 14789327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 33605705 - 33605649
Alignment:
Q  49 tgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||  ||||||||||| |||||||  |||||| ||||| |||||||||||    
T  33605705 tgttcaacctccacttttctatctgatgtgagacatatagctcacacttgcacacaa 33605649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 34835308 - 34835205
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||   ||||||||||||||||| |    
T  34835308 acccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactcacccttgta 34835209  T
Q  101 caca 104  Q
    ||||    
T  34835208 caca 34835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 41972254 - 41972153
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacac 103  Q
    |||||||||| ||||||| ||||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||   |||||||||||| |||||||||    
T  41972254 caaaactttatggcaatgggtttatgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacac 41972155  T
Q  104 aa 105  Q
    ||    
T  41972154 aa 41972153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 45122116 - 45122221
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |  |||||||||||| || |||||||||||||| ||||||||||||||| || ||||||||||||  |||||||||||| ||||||    
T  45122116 acccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacacttgca 45122215  T
Q  101 cacaat 106  Q
    ||||||    
T  45122216 cacaat 45122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3669786 - 3669687
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| ||||||    
T  3669786 acccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgca 3669687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 5420746 - 5420673
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5420746 aaaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttactattctatccgatgtg 5420673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9608844 - 9608735
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||  ||| ||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| ||   |||||||||||| ||||||    
T  9608844 acccaaaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatgggacatataactcacacttgca 9608745  T
Q  101 cacaatagaa 110  Q
    ||||| ||||    
T  9608744 cacaacagaa 9608735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 9309440 - 9309350
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||| | ||||||||||||||||| |||||||| |||||| || |||||||||||   |||||||||||| |||||||||||    
T  9309440 ggcaatgagtttaagggtcctcttacttataaggtgttcaacatttactcttttatccgatgtgggacatataactcacacttgcacacaa 9309350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40518681 - 40518575
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | || || ||||||| ||||||||| ||||||| ||||||||||||||||||||||| ||||||   |||||||||||| |||| |    
T  40518681 acccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttacttttctatctgatgtgggacatataactcacacttgaa 40518582  T
Q  101 cacaata 107  Q
    |||||||    
T  40518581 cacaata 40518575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 45121969 - 45122070
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||  ||| ||||||||||||||| ||||||||||||||||  ||||||||||||||| || ||| |||||||   |||||||||||| ||||||    
T  45121969 acccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggacatataactcacacttgca 45122068  T
Q  101 ca 102  Q
    ||    
T  45122069 ca 45122070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 147550 - 147458
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||||||| ||||||  ||||||| ||||||||| ||||||| ||||||||||||||| || |||||||||||   ||||||||||||    
T  147550 acccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaacctttactcttttatccgatgtgggacatataactcac 147458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 3038349 - 3038453
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||| ||||||||||  ||||||||||||||| || |||||||||||   |||||||||||| |||| |    
T  3038349 acccaaaaccttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcacacttgta 3038448  T
Q  101 cacaa 105  Q
    |||||    
T  3038449 cacaa 3038453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4154725 - 4154829
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| || |||||||||||||||| ||||| | ||||||||  ||||||||||  ||||||||||| ||||||   |||||||||||| ||||||    
T  4154725 acccaaaaccttggggcaatgagtttatgggtcctttcacttataaagtgttcaacctccacttttctatcagatgtgggacatataactcacacttgca 4154824  T
Q  101 cacaa 105  Q
    |||||    
T  4154825 cacaa 4154829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 25561876 - 25561972
Alignment:
Q  2 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    |||||||| ||| | ||||||||||||| ||||||||||||||||| |||||||| |||||| || |||||||||||   |||||||||||| ||||    
T  25561876 cccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacgtttactcttttatccgatgtgggacatataactcacacttg 25561972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30359370 - 30359266
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||| ||| ||||||| |||||||| |||||||| |||||||| |||||| || ||||||||||||  |||||||||||| |||| |    
T  30359370 acccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgagacatataactcacacttgta 30359271  T
Q  101 cacaa 105  Q
    |||||    
T  30359270 cacaa 30359266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33113426 - 33113502
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 77  Q
    ||||||||  ||| ||||||||||||||| |||||||||||||||||| |||||||||||||| || ||||||||||    
T  33113426 acccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttactattttatccgatgt 33113502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 34834975 - 34834871
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| ||| ||||||||||||| |||| |||||||||| || ||||| |||||   |||||||||||| |||| |    
T  34834975 acccaaaaccttaaggcaatgagtttatgagtcatcttacttataaggtgtttaacctttactattttatccaatgtgggacatataactcacacttgta 34834876  T
Q  101 cacaa 105  Q
    |||||    
T  34834875 cacaa 34834871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 34835574 - 34835470
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatc-cgatgtgaagcatataactcacccttgc 99  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||| |||| |||||||||| || ||||  || |||   |||||||||||||||||     
T  34835574 acccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatcgggacgtgggacatataactcacccttgt 34835475  T
Q  100 acaca 104  Q
    |||||    
T  34835474 acaca 34835470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 34835840 - 34835736
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatc-cgatgtgaagcatataactcacccttgc 99  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||| |||| |||||||||| || ||||  || |||   |||||||||||||||||     
T  34835840 acccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatcgggacgtgggacatataactcacccttgt 34835741  T
Q  100 acaca 104  Q
    |||||    
T  34835740 acaca 34835736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 45122723 - 45122648
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatg 76  Q
    ||||||||| ||| | ||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||||    
T  45122723 acccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatg 45122648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 8794188 - 8794106
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| |||||||||||||||||||||||||| |||| | || ||||||||||||  |||||||||||| |||| ||||||    
T  8794188 gtttatgagtcctcttacttataagatgttcaacatttattcttttatccgatgtgagacatataactcacacttgtacacaa 8794106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 9309077 - 9308972
Alignment:
Q  2 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaag--catataactcacccttgc 99  Q
    |||||||| ||  ||||||| ||||||| |||||||||||||||| ||||||||| |||||| || |||| |||||| ||  |||||||||||| |||||    
T  9309077 cccaaaacctttaggcaatgggtttatgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactcacacttgc 9308978  T
Q  100 acacaa 105  Q
    ||||||    
T  9308977 acacaa 9308972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 9482677 - 9482755
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||| ||||| | ||||||||||||    
T  9482677 ggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatcccatgtggaacatataactcac 9482755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 70337 - 70425
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||| ||| |||| || ||||||| |||||||||||||||||||||||||| |||||| || |||||||||||   ||||||||||||    
T  70337 aaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactcttttatccgatgtgggacatataactcac 70425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 1013933 - 1014029
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||| || ||||||| ||||||  ||||||||||||||| | |||||||| |||||| || ||||||||||| | |||||||||||| ||||||    
T  1013933 caaaactctaaggcaatgggtttattggtcctcttacttatagggtgttcaacttttactattttatccgatgtggaacatataactcacacttgca 1014029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 9609180 - 9609108
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 77  Q
    ||||| ||| ||| ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||    
T  9609180 aaaacattaaggcgatgggtttatgggtcatcttacttataagatgttcaacctttacttttctatctgatgt 9609108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 1014304 - 1014403
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||||||| || || ||||||| | ||||||||||||||||| ||||||||||||||| || |||| |||||    |||||||||||| ||||||    
T  1014304 acccaaaactttaaggtaacgagtttacgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactcacacttgca 1014403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 43398129 - 43398222
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctc---ttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||||| |||||||| |||||| ||||||   ||| ||||||| ||||||||||||||||||||||||||| |||   |||||||||||    
T  43398129 ccaaaactttaaggcaatgaatttatgggtcctcctcttatttataaggtgttcaacctttacttttctatccgatatgagatatataactcac 43398222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9483246 - 9483320
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 75  Q
    ||||||||| ||| | ||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||    
T  9483246 acccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 9620749 - 9620839
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||||| ||||||| ||||||||  || ||||| | |||||||||||| | |||||  |||||||||||| |||||||||||    
T  9620749 ggcaatgagtttatgggtcctctcacttataaagtgatcaacttctacttttctatctgttgtgagacatataactcacacttgcacacaa 9620839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 30359686 - 30359604
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||||||||||||| |||||||| |||||| || |||| |||||||  |||||||||||| |||| ||||||    
T  30359686 gtttatgagtcctcttacttataaggtgttcaacttttactcttttatctgatgtgagacatataactcacacttgtacacaa 30359604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 40579580 - 40579662
Alignment:
Q  16 gcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||||||| || ||||| || |||| ||||||| |||| ||||    
T  40579580 gcaataagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatatgaaacatataattcacacttg 40579662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 43274860 - 43274930
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||| |||||||||||||||| || ||||||||||||| || |||| |||||||| ||||||||||||    
T  43274860 gtttatgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatataactcac 43274930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 6876937 - 6877026
Alignment:
Q  17 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt-gaagcatataactcacccttgcacacaa 105  Q
    |||||||| |||| ||| ||||| ||||||| |||||||||||||||||| |||||||||| | |  ||||||||||| |||||||||||    
T  6876937 caatgagtgtatgggtcatcttatttataaggtgttcaacctttacttttttatccgatgtgggactatataactcacacttgcacacaa 6877026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 8918823 - 8918927
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||  ||||||| ||||||||||||||||  ||||||||||||||| | ||||| ||||||   ||| |||||||| ||||||    
T  8918823 acccaaaaccttaagtcaataggtttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactcacacttgca 8918922  T
Q  101 cacaa 105  Q
    |||||    
T  8918923 cacaa 8918927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 20870654 - 20870718
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 87  Q
    ||||||| ||||||||||||||||||||||||||||||||| || |||| |||||| | ||||||    
T  20870654 gtttatgggtcctcttacttataagatgttcaacctttactattttatctgatgtggaacatata 20870718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3670159 - 3670060
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| || |||  ||||||| |||||| |||||||||| |||| |||||||||| || |||||||||||   |||||||||||| ||||||    
T  3670159 acccaaaaccttaaggaaataggtttatgggtcctcatacttataaggtgttaaacctttactattttatccgatgtgggacatataactcacacttgca 3670060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 18372349 - 18372416
Alignment:
Q  35 tcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||  |||||||||||| ||| ||||    
T  18372349 tcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactttcaca 18372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 18372788 - 18372859
Alignment:
Q  31 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||| ||||    
T  18372788 gtcctcttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactcacactttcaca 18372859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 18373004 - 18373063
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 74  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||| || |||||||    
T  18373004 ggcaatgagtttatgagtcctcttatttataaggtgttcaacctttactattttatccga 18373063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 40518170 - 40518064
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttac--ttttctatccgatgtgaagcatataactcacccttg 98  Q
    ||||||||| ||| |||| || ||||||| ||||  ||||||||||| ||||||||||||||  |||| ||||| ||||| | |||||||||||| ||||    
T  40518170 acccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaacctttacttttttttatccaatgtggaacatataactcacacttg 40518071  T
Q  99 cacacaa 105  Q
     ||||||    
T  40518070 aacacaa 40518064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18372053 - 18372115
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 63  Q
    ||||||||| |||  ||||||||||||||  |||||||||||||||| |||||||||||||||    
T  18372053 acccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaacctttact 18372115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 41416252 - 41416322
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    |||||||  |||||||||||||||| ||||||||||||||| || |||||||||||   ||||||||||||    
T  41416252 gtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1513974 - 1514051
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||| ||| ||  ||| ||||| | ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  1513974 acccaaaaccttaaggttatgggtttaagggtcctcttacttataaggtgttcaacctttactcttttatccgatgtg 1514051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 18372676 - 18372734
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 74  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||    
T  18372676 ggcaatgggtttatgagtcctcttacttataag-tgttcaacctttactattttatccga 18372734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 3037783 - 3037853
Alignment:
Q  17 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 87  Q
    ||||| ||||||| ||||||||||||||||| |||||||| |||||| ||  |||||||||| | ||||||    
T  3037783 caatgggtttatgagtcctcttacttataaggtgttcaacatttactatttcatccgatgtggaacatata 3037853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9507881 - 9507819
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 63  Q
    ||||||||| ||| || |||| ||||||| ||||||||||||||||| | |||||||||||||    
T  9507881 acccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattcaacctttact 9507819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 30441184 - 30441081
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttactta----taagatgttcaacctttacttttctatccgatgtgaagcatataactcaccct 96  Q
    ||||||||| ||| ||||||| ||||||| | |||||||||||    |||| ||||||||||||||| || || ||||||||   |||||||||||| ||    
T  30441184 acccaaaaccttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaacctttactattttagccgatgtgggacatataactcacact 30441085  T
Q  97 tgca 100  Q
    ||||    
T  30441084 tgca 30441081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 12283953 - 12283868
Alignment:
Q  20 tgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||||||||| | |||||| |||||| |||||| ||||||||| |||| || |||   ||||||||| || |||||||||||    
T  12283953 tgagtttatgtgtcattttacttttaagatattcaacatttacttttttatctgacgtgggacatataacttacacttgcacacaa 12283868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4154340 - 4154443
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||  ||| ||||||||||||||| ||| ||| ||||||||  ||||||||||  ||||||||||| |||||    ||||||||||||  |||||    
T  4154340 acccaaaatattaaggcaatgagtttatgggtc-tctcacttataaagtgttcaacctccacttttctatctgatgtaggacatataactcacatttgca 4154438  T
Q  101 cacaa 105  Q
    |||||    
T  4154439 cacaa 4154443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 25561736 - 25561780
Alignment:
Q  34 ctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    |||||||||||||| ||||||||||||||| || |||||||||||    
T  25561736 ctcttacttataaggtgttcaacctttactcttttatccgatgtg 25561780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 45121737 - 45121792
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    |||||||  |||||||||||||||| || |||||||||||| || |||||||||||    
T  45121737 gtttatggatcctcttacttataaggtgatcaacctttactcttttatccgatgtg 45121792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 33832047 - 33831973
Alignment:
Q  31 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||||||  |||||||| | ||||||||| | | | ||||  |||||||||||| |||||||||||    
T  33832047 gtcctcttacttataaagtgttcaacttctacttttctcttcaacgtgagacatataactcacacttgcacacaa 33831973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 37544572 - 37544626
Alignment:
Q  24 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    |||||| |||||||| |||||||  ||||||||||||||| || |||||||||||    
T  37544572 tttatgggtcctctttcttataatgtgttcaacctttactattttatccgatgtg 37544626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 45123081 - 45123002
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    ||||||| ||| |||||||||  || |||| |||||||||| || |||||||||||   |||||||||||| ||||||||||    
T  45123081 gtttatgggtcatcttactta--aggtgtttaacctttactattttatccgatgtgggacatataactcacacttgcacaca 45123002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 147880 - 147824
Alignment:
Q  49 tgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||| ||||||||| |||| ||||||   |||||||||||| |||||||||||    
T  147880 tgttcaacatttacttttttatcagatgtgggacatataactcacacttgcacacaa 147824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 20995508 - 20995564
Alignment:
Q  49 tgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||  |||||| |||| |||||||  |||||||||||| |||||||||||    
T  20995508 tgttcaacctccacttttttatctgatgtgagacatataactcacacttgcacacaa 20995564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 32305559 - 32305503
Alignment:
Q  18 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 74  Q
    |||| ||||||  ||| ||||||||||||| ||||||||||||||| || |||||||    
T  32305559 aatgggtttataggtcttcttacttataaggtgttcaacctttactattttatccga 32305503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 5442 - 5352
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||||||||| |||||||||||    
T  5442 ggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatataactcacacttgcacacaa 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 5081 - 4977
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    |||||||||  || ||||||||||||||| ||| | ||||||||||||| || |||||||||| |||| ||||||||||  ||||||| |||| ||||||    
T  5081 acccaaaaccataaggcaatgagtttatgggtctttttacttataagatattaaacctttactgttctctccgatgtgagacatataattcacacttgca 4982  T
Q  101 cacaa 105  Q
    |||||    
T  4981 cacaa 4977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 9e-27; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 21832402 - 21832503
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||   |||||||||||| ||||||    
T  21832402 acccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactcacacttgca 21832501  T
Q  101 ca 102  Q
    ||    
T  21832502 ca 21832503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15773291 - 15773187
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||| || ||| |||||||   |||||||||||| ||||||    
T  15773291 acccaaaactttaaggcaatgagcttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggacatataactcacacttgca 15773192  T
Q  101 cacaa 105  Q
    |||||    
T  15773191 cacaa 15773187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 37990698 - 37990802
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||| | |||||||||||| |||| |    
T  37990698 acccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacacttgta 37990797  T
Q  101 cacaa 105  Q
    |||||    
T  37990798 cacaa 37990802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 12114621 - 12114725
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||| || ||||||    
T  12114621 acccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggatatataacttacacttgca 12114720  T
Q  101 cacaa 105  Q
    |||||    
T  12114721 cacaa 12114725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 25739499 - 25739588
Alignment:
Q  16 gcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||| || |||||||||||   |||||||||||| |||||||||||    
T  25739499 gcaatgagtttatgggtcctcttacttatatgatgttcaacttttactattttatccgatgtgggacatataactcacacttgcacacaa 25739588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 35946621 - 35946517
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||| | ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||| |    
T  35946621 acccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgta 35946522  T
Q  101 cacaa 105  Q
    |||||    
T  35946521 cacaa 35946517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 37991036 - 37991140
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||| ||||||||||  ||||||||||||||||| ||||||||||||||| || ||||| ||||||  |||||||||||| |||| |    
T  37991036 acccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttactattttatccaatgtgagacatataactcacacttgta 37991135  T
Q  101 cacaa 105  Q
    |||||    
T  37991136 cacaa 37991140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 43346850 - 43346954
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| || |||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| |||| |    
T  43346850 acccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgta 43346949  T
Q  101 cacaa 105  Q
    |||||    
T  43346950 cacaa 43346954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 49336746 - 49336850
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||| ||||||| | | ||| ||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||  ||| |||||||| |||| |    
T  49336746 acccagaactttaagactatgggtttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgagacatgtaactcacacttgta 49336845  T
Q  101 cacaa 105  Q
    |||||    
T  49336846 cacaa 49336850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 51886645 - 51886561
Alignment:
Q  16 gcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| || ||| ||||||||  |||||||||||| ||||||    
T  51886645 gcaatgagtttatgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataactcacacttgca 51886561  T

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Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 9240225 - 9240144
Alignment:
Q  24 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||| ||||||||||||||||| |||||| | ||||||| ||||||||||||| | |||||||||||| |||||||||||    
T  9240225 tttatgggtcctcttacttataaggtgttcagcttttacttctctatccgatgtggaacatataactcacacttgcacacaa 9240144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 33175720 - 33175827
Alignment:
Q  1 acccaaaactttagggcaatgagtttat---gtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 97  Q
    ||||||||| ||| ||| ||||||||||   | || |||||||||||||| ||||||||||||||||||||||| |||||||  |||||||||||| |||    
T  33175720 acccaaaaccttaaggctatgagtttattatgggttctcttacttataaggtgttcaacctttacttttctatctgatgtgagacatataactcacactt 33175819  T
Q  98 gcacacaa 105  Q
    | ||||||    
T  33175820 gtacacaa 33175827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 15772951 - 15772851
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||| |||  |||||||||||||| ||||||||||||||||| |||||||| |||||| || |||||||| ||   |||||||||||| ||||||||    
T  15772951 ccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacatttactcttttatccgatatgggacatataactcacacttgcaca 15772852  T
Q  103 c 103  Q
    |    
T  15772851 c 15772851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25755493 - 25755389
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||| ||||||||| |||||  |||||| ||||||||||||||||| | ||||||||||||| || |||| |||||||  |||||||||||| |||| |    
T  25755493 acccacaactttaggacaatggatttatgagtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataactcacacttgta 25755394  T
Q  101 cacaa 105  Q
    |||||    
T  25755393 cacaa 25755389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 29644640 - 29644744
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||| ||||||| || |||||||||||||| ||||||||||||||| ||  ||||||||||   |||||||||||| ||||||    
T  29644640 acccaaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactcacacttgca 29644739  T
Q  101 cacaa 105  Q
    |||||    
T  29644740 cacaa 29644744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 29644961 - 29645065
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||| ||||||| ||||||||||||||||| |||| |||||||||| || |||||||||||   ||||||||| || ||||||    
T  29644961 acccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataacttacacttgca 29645060  T
Q  101 cacaa 105  Q
    |||||    
T  29645061 cacaa 29645065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 22304668 - 22304569
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| || |||||||||||   |||||| ||||| ||||||    
T  22304668 acccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttactattttatccgatgtgggacatatagctcacacttgca 22304569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 54017897 - 54017979
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||    |||||||||||| |||||||||||    
T  54017897 gtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaa 54017979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 33803326 - 33803415
Alignment:
Q  16 gcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||| ||||||| ||||||||||||||| | ||||||||||||||| || |||||||||||   ||||||||||||  ||||||||||    
T  33803326 gcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatccgatgtgggacatataactcacaattgcacacaa 33803415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 39935017 - 39935090
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 77  Q
    |||||||||| ||||||| |||||||  |||||||||||||||| ||||||||||||||| || ||||||||||    
T  39935017 caaaactttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactcttttatccgatgt 39935090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41359824 - 41359901
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| || |||||||||||    
T  41359824 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactattgtatccgatgtg 41359901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 45901809 - 45901708
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttactt-ttctatccgatgtgaagcatataactcacccttgcacac 103  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||  || || |||||||||||   |||||||||||| |||| ||||    
T  45901809 aaaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacatataactcacacttgtacac 45901710  T
Q  104 aa 105  Q
    ||    
T  45901709 aa 45901708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 1634373 - 1634477
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacc-tttacttttctatccgatgtgaagcatataactcacccttgc 99  Q
    ||||||||| ||| | ||||| ||||||| ||||||||||||||||  |||| |||| |||| ||||||||||||||||   |||||||||||| |||||    
T  1634373 acccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataactcacacttgc 1634472  T
Q  100 acaca 104  Q
    |||||    
T  1634473 acaca 1634477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 8328003 - 8327899
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||| |  ||||||| || |||||||||||||||| |||| |||||||| || |||||||||||   |||||||||||| ||||||    
T  8328003 acccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtgggacatataactcacacttgca 8327904  T
Q  101 cacaa 105  Q
    |||||    
T  8327903 cacaa 8327899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 42342149 - 42342253
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||||||   || ||| |||||| || ||||||||||| | ||||| | |||| ||||||    
T  42342149 acccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggcattgaacatttactcttttatccgatgtggaacatatgaatcacacttgca 42342248  T
Q  101 cacaa 105  Q
    |||||    
T  42342249 cacaa 42342253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 42342447 - 42342551
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | |||||  |||||| ||||||||||||||||| |||| |||||||||| || |||| ||||||   |||||||||||| ||||||    
T  42342447 acccaaaaccttaagacaatggatttatgggtcctcttacttataaggtgttgaacctttactcttttatcggatgtgggacatataactcacacttgca 42342546  T
Q  101 cacaa 105  Q
    |||||    
T  42342547 cacaa 42342551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 52634774 - 52634671
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||| |||||||||||||  |||||||||||||| || |||||||||||   |||||||||||| |||| |    
T  52634774 acccaaaaccttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaacctttactgttttatccgatgtgggacatataactcacacttgta 52634676  T
Q  101 cacaa 105  Q
    |||||    
T  52634675 cacaa 52634671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 4823754 - 4823655
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||  ||| ||||||||||||||| |||||| |||||||||| |||| ||| |||||| || ||||||||||||  | |||||||||| ||||||    
T  4823754 acccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtgagacttataactcacacttgca 4823655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 32462962 - 32463064
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacc-tttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    |||||| ||| ||||||| ||||||| ||| ||||||||||||| | ||||||| |||||| ||||||||||||||   |||||||||||| |||| |||    
T  32462962 caaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatataactcacacttgtaca 32463061  T
Q  103 caa 105  Q
    |||    
T  32463062 caa 32463064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 39914329 - 39914247
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||||| ||||||| |||||||||| |||| || |||| |||||||  |||||||||||| |||||||||||    
T  39914329 gtttatgggtcctcttatttataaggtgttcaacctctactgttttatctgatgtgagacatataactcacacttgcacacaa 39914247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 39336290 - 39336395
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||| |||  ||||||||||||||  |||||| ||||||||  ||||||||||  |  |||||||||||||||   |||||||||||| ||||||||    
T  39336290 ccaaaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccgatgtgggacatataactcacacttgcaca 39336389  T
Q  103 caatag 108  Q
    ||||||    
T  39336390 caatag 39336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32589802 - 32589742
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaaccttta 61  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  32589802 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttta 32589742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 47964974 - 47965078
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||  ||| ||||||| | ||||| | ||||| |||||||  ||||| |||||  ||||||||||||||||| || |||||||||||| ||||||    
T  47964974 acccaaaatcttaaggcaatgggcttatgagccctctcacttatataatgtttaacctccacttttctatccgatgtaaaacatataactcacacttgca 47965073  T
Q  101 cacaa 105  Q
    |||||    
T  47965074 cacaa 47965078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 50612534 - 50612610
Alignment:
Q  24 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    |||||| ||||||||||||||||| ||||||| ||||||| || |||||||||||   |||||||||||| ||||||    
T  50612534 tttatgagtcctcttacttataaggtgttcaatctttactattttatccgatgtgggacatataactcacacttgca 50612610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 53577463 - 53577359
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    |||||| || ||| ||||||  |||||||  ||| |||| || |||||||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  53577463 acccaagaccttaaggcaatatgtttatggatccacttatttttaagatgttcaacctttactgttttatccgatgtgtgacatataactcacacttgca 53577364  T
Q  101 cacaa 105  Q
    |||||    
T  53577363 cacaa 53577359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 7767389 - 7767464
Alignment:
Q  17 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 92  Q
    ||||| ||||||| ||||||||| ||||||  ||| ||||||||||||||||||||||||||   |||||||||||    
T  7767389 caatgggtttatgagtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatataactca 7767464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 31190091 - 31190012
Alignment:
Q  26 tatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||| ||||||| ||||||||| ||||||||||||||| || |||||||||||   ||||| |||||| |||||||||||    
T  31190091 tatgggtcctctaacttataaggtgttcaacctttactcttttatccgatgtgggacatatcactcacacttgcacacaa 31190012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 39389169 - 39389070
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||| ||||||| ||||||||| || |||| ||||||||||||||| || ||||||||||    |||||||||||| ||||||    
T  39389169 acccaaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgca 39389070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 53118064 - 53118137
Alignment:
Q  32 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||| ||||||||| ||||||||||||||| || |||||||| || | |||||||||||| ||||| |||||    
T  53118064 tcctctcacttataaggtgttcaacctttactcttttatccgatatggaacatataactcacacttgcccacaa 53118137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 37726572 - 37726504
Alignment:
Q  32 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    |||||||||||||||| | |||||| |||||| || ||||||||||||  |||||||||||| ||||||    
T  37726572 tcctcttacttataaggtattcaacatttactattttatccgatgtgagacatataactcacacttgca 37726504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 11661602 - 11661531
Alignment:
Q  33 cctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    |||||||||||||||||||| |||| ||||| || |||||||||||   |||||||||||| |||| |||||    
T  11661602 cctcttacttataagatgtttaaccgttactattttatccgatgtgggacatataactcacacttgtacaca 11661531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 42584903 - 42584958
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    |||||||  |||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  42584903 gtttatggatcctcttacttataaggtgttcaatctttactcttctatccgatgtg 42584958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 54018279 - 54018358
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||| ||||||||||||||||| ||||||| ||||||| || |||||||||     |||||||||||| ||||||||    
T  54018279 gtttatgggtcctcttacttataaggtgttcaatctttactcttttatccgatgcaggacatataactcacacttgcaca 54018358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 3384325 - 3384427
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||||||| |||| | |||||||| |||||||| |||||||  |||| ||||| |||| || ||||  |||||   |||||||||||| ||||||    
T  3384325 acccaaaactttaaggcattaagtttatgggtcctcttccttataaagtgtttaacctatactgttttatcatatgtgggacatataactcacgcttgca 3384424  T
Q  101 cac 103  Q
    |||    
T  3384425 cac 3384427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 44160605 - 44160707
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||| ||| | ||||| |||||||  |||||||| ||||||| ||||||||||||| | || ||||| || |||| ||||||||| || |||||| |    
T  44160605 ccaaaaccttaagacaatgggtttatggatcctcttatttataaggtgttcaacctttattgttttatccaatatgaaacatataactgacacttgcata 44160704  T
Q  103 caa 105  Q
    |||    
T  44160705 caa 44160707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 3135135 - 3135224
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    |||||| ||| |||| || ||||||| || || ||||||||||| |||||||| |||||| || |||||||||||   ||||||||||||    
T  3135135 caaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaacatttactattttatccgatgtgggacatataactcac 3135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 45395712 - 45395816
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||| |||||||  |||||||||||||||  |||| |||||||||| || ||| |||||||    |||||||| || ||||||    
T  45395712 acccaaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaacctttactcttttattcgatgtgggatatataacttacacttgca 45395811  T
Q  101 cacaa 105  Q
    |||||    
T  45395812 cacaa 45395816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33362352 - 33362425
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 74  Q
    ||||||||  ||| || |||| ||||||| ||||||||||||||||| | ||||||||||| | || |||||||    
T  33362352 acccaaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaacctttattattttatccga 33362425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 43346706 - 43346645
Alignment:
Q  44 taagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||| ||||||||||||||| || |||||||||||   |||| ||||||| |||||||||||    
T  43346706 taaggtgttcaacctttactattttatccgatgtgggacatacaactcacacttgcacacaa 43346645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 11662046 - 11661958
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||| ||| ||||||  ||||||| | ||||| |||| |||| ||||||||||||||| || ||||| |||||  |||| ||||||||    
T  11662046 aaaaccttaaggcaattggtttatgaggcctctcacttttaaggtgttcaacctttactcttttatccaatgtggggcatttaactcac 11661958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 12747871 - 12747915
Alignment:
Q  61 acttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||||||||   |||||||||||| |||||||||||    
T  12747871 acttttctatccgatgtgggacatataactcacacttgcacacaa 12747915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 47964577 - 47964681
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||  ||||||| ||||||| |||||||    |||||||||  || ||||||||||||| |   |||| ||||||| ||||||    
T  47964577 acccaaaaccttaaggcaataggtttatgggtcctctcacttatatagcgttcaacctccacatttctatccgatgcgggacatacaactcacacttgca 47964676  T
Q  101 cacaa 105  Q
    |||||    
T  47964677 cacaa 47964681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 7517679 - 7517575
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  7517679 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgca 7517580  T
Q  101 cacaa 105  Q
    |||||    
T  7517579 cacaa 7517575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30245176 - 30245072
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||| || ||||||||||| | |||||||||||| |||| |    
T  30245176 acccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacacttgta 30245077  T
Q  101 cacaa 105  Q
    |||||    
T  30245076 cacaa 30245072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 28301616 - 28301706
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||| ||||||||||||||||| |||||| | ||||||||||||||||||||||  |||||||||||| |||||||||||    
T  28301616 ggcaatgggtttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaa 28301706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 23436 - 23540
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||  ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | ||||||||||||  |||||    
T  23436 acccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattgtatccgatgtggaacatataactcacaattgca 23535  T
Q  101 cacaa 105  Q
    |||||    
T  23536 cacaa 23540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1085675 - 1085779
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  1085675 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 1085774  T
Q  101 cacaa 105  Q
    |||||    
T  1085775 cacaa 1085779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 16569291 - 16569191
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||||  |||||||||||| |||||| |||    
T  16569291 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcataca 16569192  T
Q  105 a 105  Q
    |    
T  16569191 a 16569191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 16596371 - 16596471
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||||  |||||||||||| |||||| |||    
T  16596371 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcataca 16596470  T
Q  105 a 105  Q
    |    
T  16596471 a 16596471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 37533069 - 37533168
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||||| |||||   |||||||||||| ||||||    
T  37533069 acccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacacttgca 37533168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 7554124 - 7554020
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||| ||| |||||||  |||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  7554124 acccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 7554025  T
Q  101 cacaa 105  Q
    |||||    
T  7554024 cacaa 7554020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 22566721 - 22566825
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   ||||| |||||| ||||||    
T  22566721 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactcacacttgca 22566820  T
Q  101 cacaa 105  Q
     ||||    
T  22566821 tacaa 22566825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 22567102 - 22567201
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | ||||| |||||| |||||| |||    
T  22567102 aaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgga-catattactcacacttgcataca 22567200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30244369 - 30244265
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| || |||||||||||   |||||||||||| |||| |    
T  30244369 acccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactcttttatccgatgtgggacatataactcacacttgta 30244270  T
Q  101 cacaa 105  Q
    |||||    
T  30244269 cacaa 30244265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 43241578 - 43241490
Alignment:
Q  17 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||| |||||||| ||||| ||||||||||| ||||||||||||| |||| ||||||||||| | |||||||||||| |||||||||||    
T  43241578 caataagtttatgagtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatataactcacacttgcacacaa 43241490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 45434735 - 45434631
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||| | |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||   ||||||||| || |||| |    
T  45434735 acccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacctttacttttttatccgatgtgggacatataacttacacttgta 45434636  T
Q  101 cacaa 105  Q
    |||||    
T  45434635 cacaa 45434631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 11845288 - 11845198
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||| ||| |||||||  |||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | ||||||||||||    
T  11845288 ccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactcac 11845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 40230350 - 40230456
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | | ||| ||||||| |||||||||||||||||||||||||| ||||||||| ||| |||||||   ||||||||| || ||||||    
T  40230350 acccaaaaccttaagactatgggtttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtgggacatataacttacacttgca 40230449  T
Q  101 cacaata 107  Q
    |||||||    
T  40230450 cacaata 40230456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6054659 - 6054570
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataact 90  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||||  |||||||||    
T  6054659 acccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtgagacatataact 6054570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 47129194 - 47129097
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    ||||||||| |||  || ||| ||||||| |||||||||||||||||| |||||||||||||| || ||||||||||||  |||||||||||| ||||    
T  47129194 acccaaaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtgagacatataactcacacttg 47129097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 118360 - 118464
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| || |||| |||||||  ||||||||||||| || ||||||||||||||||||||||| ||||||   ||||||||| || ||||||    
T  118360 acccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaacctttacttttctatctgatgtgggacatataacttacacttgca 118459  T
Q  101 cacaa 105  Q
    |||||    
T  118460 cacaa 118464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 24177530 - 24177430
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    ||||||||| ||||||| ||||||| |||| |||||||||||| |||||| |||||||| || |||||||||||   |||||||||||  ||||||||||    
T  24177530 aaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttttatccgatgtgggacatataactcatacttgcacaca 24177431  T
Q  105 a 105  Q
    |    
T  24177430 a 24177430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34218093 - 34218185
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||| ||| | ||||| ||||||| ||||||| ||||||||| |||||||| ||||||||| ||||||||||||  ||||||||||||    
T  34218093 acccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttacttttttatccgatgtgagacatataactcac 34218185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 40094833 - 40094937
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | | ||| ||||||| ||||||||||||||||| |||| |||||||||| || ||| ||||||||  |||||||||||| ||||||    
T  40094833 acccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttactcttttattcgatgtgagacatataactcacacttgca 40094932  T
Q  101 cacaa 105  Q
    |||||    
T  40094933 cacaa 40094937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 45433340 - 45433236
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||  ||| ||||||  ||||||| || |||||||||||||| ||||||||||||||| || ||||||||||| | |||||||||||| |||| |    
T  45433340 acccaaaatcttaaggcaataggtttatgagttctcttacttataaggtgttcaacctttactcttttatccgatgtggatcatataactcacacttgta 45433241  T
Q  101 cacaa 105  Q
    |||||    
T  45433240 cacaa 45433236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19122830 - 19122740
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 92  Q
    ||||||||| ||| |||||||  |||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | |||||||||||    
T  19122830 acccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaacctttactattttatccgatgtgga-catataactca 19122740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 8128522 - 8128604
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| |||||||||| |||||| ||||||||||||| ||||||||||||| ||   |||||||||||| |||||||||||    
T  8128522 gtttatgggtcctcttacatataaggtgttcaacctttatttttctatccgatatgggacatataactcacacttgcacacaa 8128604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 36623059 - 36622953
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||||||  ||||||  ||||| ||||||||| ||||| |||||||||| || |||||||||||   |||||||||||| ||||||    
T  36623059 acccaaaaccttaaggcaatggatttatggatcctcctacttataaaatgtttaacctttactattttatccgatgtgggacatataactcacacttgca 36622960  T
Q  101 cacaata 107  Q
    |||||||    
T  36622959 cacaata 36622953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 36109007 - 36109080
Alignment:
Q  32 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||   ||||||||||| |||||||||||    
T  36109007 tcctcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaa 36109080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 45754814 - 45754711
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||| ||| ||||||| ||| ||||||||||||| |||||||| |||||| || ||||||||||| | |||||||||||| |||| |    
T  45754814 acccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttactattttatccgatgtgga-catataactcacacttgta 45754716  T
Q  101 cacaa 105  Q
    |||||    
T  45754715 cacaa 45754711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 29157664 - 29157565
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||||||  |||||| ||| ||||||||||||| ||||||||||||||| || |||||| ||||   |||||||||||| ||||||    
T  29157664 acccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtgggacatataactcacacttgca 29157565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9901742 - 9901638
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | |||||||||||||  |||||| || |||||||||||||||||||||| || ||||||||||| | |||||||||||| |||  |    
T  9901742 acccaaaaccttaagacaatgagtttatggatcctct-acgtataagatgttcaacctttactgttttatccgatgtgga-catataactcacacttata 9901645  T
Q  101 cacaata 107  Q
    |||||||    
T  9901644 cacaata 9901638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36939792 - 36939893
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||||||  |||||| ||||||||||||||||| |||||||| |||||| || ||| |||| ||   |||||||||||| ||||||    
T  36939792 acccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacttttactattttatacgatttgggacatataactcacacttgca 36939891  T
Q  101 ca 102  Q
    ||    
T  36939892 ca 36939893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 20599413 - 20599321
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||| ||| |||||||||||||| |||||||||| ||||||  |||| | ||||||||||| |||||||| ||   ||||||||||||    
T  20599413 acccaaaacgttaaggcaatgagtttatatgtcctcttatttataaagtgtttatcctttacttttttatccgatatgggacatataactcac 20599321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 30245561 - 30245489
Alignment:
Q  33 cctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| |||||||||||    
T  30245561 cctcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaa 30245489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 30255406 - 30255334
Alignment:
Q  33 cctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||   |||||||| ||| |||||||||||    
T  30255406 cctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaa 30255334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 37533423 - 37533515
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||| ||| |||||||  |||||| ||||||||||||||||| ||||||||||||||| || ||| | ||||  | ||||||||||||    
T  37533423 acccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtagaacatataactcac 37533515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1085307 - 1085381
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 75  Q
    ||||||||| ||| ||||||||||||||| || ||||||||||| || |||||||| |||||| || ||||||||    
T  1085307 acccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatccgat 1085381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 30244770 - 30244696
Alignment:
Q  31 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||| ||||||| ||||||||||||||| || ||||| |||||   |||||||||||| |||||||||||    
T  30244770 gtcctcttatttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaa 30244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 41910669 - 41910757
Alignment:
Q  17 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||| ||||||| ||||||| | ||||||| | ||||||||||||| || |||||||||||   |||||||||||| ||| |||||||    
T  41910669 caatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtgggacatataactcacacttacacacaa 41910757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 14681609 - 14681510
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||| ||||||| | ||||||||||| ||| ||||||||||||||| || |||| ||||||   ||||||||| || ||||||    
T  14681609 acccaaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaacctttactattttatctgatgtgggacatataacttacacttgca 14681510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 36534865 - 36534947
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||||||||||||| |||||||||| |||| || ||||||| |||   ||||||| | || |||||||||||    
T  36534865 gtttatgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggacatataagttacacttgcacacaa 36534947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30253591 - 30253534
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacct 58  Q
    ||||||||| ||| ||||||||||||||| || |||||||||||||| | ||||||||    
T  30253591 acccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaacct 30253534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 24838795 - 24838850
Alignment:
Q  35 tcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataact 90  Q
    ||||||||||||| ||||||||||||||| || ||| ||||||||  |||||||||    
T  24838795 tcttacttataaggtgttcaacctttactcttttattcgatgtgagacatataact 24838850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 36967344 - 36967392
Alignment:
Q  57 ctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||||| ||||||||||||  |||||||||||| |||| ||||||    
T  36967344 ctttacttttttatccgatgtgagacatataactcacacttgtacacaa 36967392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 41632859 - 41632777
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||| || |||||||||||    
T  41632859 gtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataacttacacttgcacacaa 41632777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 26074711 - 26074607
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||| || | |||||||||||| |||| |    
T  26074711 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatatggaacatataactcacacttgta 26074612  T
Q  101 cacaa 105  Q
    |||||    
T  26074611 cacaa 26074607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 26075221 - 26075325
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||||  ||||||| |||| |||| |    
T  26075221 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgagacatataaatcacacttgta 26075320  T
Q  101 cacaa 105  Q
    |||||    
T  26075321 cacaa 26075325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41170733 - 41170641
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||   ||||||||||||    
T  41170733 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcac 41170641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 9498713 - 9498805
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||  ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||  ||||||||||||    
T  9498713 acccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattctatctgatgtgagacatataactcac 9498805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 26074205 - 26074309
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||| ||| |||||||||| ||| || |||||||||||||||||| |||||||||||   |||||||||||| ||||||    
T  26074205 acccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacctttacttttttatccgatgtgtgacatataactcacacttgca 26074304  T
Q  101 cacaa 105  Q
    |||||    
T  26074305 cacaa 26074309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40296374 - 40296477
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| | | ||||||| ||||||| ||||||||||||||||| |||||||||||| || || |||||||||||   |||||||||||| ||||||    
T  40296374 acccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttctattttatccgatgtgggacatataactcacacttgca 40296473  T
Q  101 caca 104  Q
    ||||    
T  40296474 caca 40296477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 11417039 - 11417138
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacac 103  Q
    |||||| ||| ||||||| |||||||  |||||||||||||||| ||||||||||||||| || ||||||||||| | |||||||||||  |||||||||    
T  11417039 caaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactca--cttgcacac 11417136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 31509708 - 31509618
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||||||||||| ||||||| ||||||||  || |||||||  |||||||||||||||||||  |||||||||||| |||||||||||    
T  31509708 ggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatataactcacacttgcacacaa 31509618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 299585 - 299484
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacac 103  Q
    |||||| ||| ||| ||||||||||| ||| ||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||| |||    
T  299585 caaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcgcac 299486  T
Q  104 aa 105  Q
    ||    
T  299485 aa 299484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 6500919 - 6500823
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||| ||| ||||||||||||||| ||||| ||| ||||||| ||||||||||||||| || ||||||||||| | |||||||||||| ||||||    
T  6500919 ccaaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactattttatccgatgtgga-catataactcacacttgca 6500823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 15370175 - 15370094
Alignment:
Q  24 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||| ||||||||||||||||||||||||||||||||| || ||| |||||||   |||||||||||| |||||||||||    
T  15370175 tttatgggtcctcttacttataagatgttcaacctttactattttattcgatgtgggacatataactcacacttgcacacaa 15370094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 18603179 - 18603276
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| ||||    
T  18603179 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttg 18603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 42508707 - 42508634
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||| ||| ||||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  42508707 aaaaccttaaggcaatgggtttatgagtcctcttacttattagatgtttaacctttacttttctatccgatgtg 42508634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 6224291 - 6224191
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    ||||| ||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||| || ||||||| |||   |||||||||||| |||| |||||    
T  6224291 aaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactcacacttgtacaca 6224192  T
Q  105 a 105  Q
    |    
T  6224191 a 6224191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13415819 - 13415923
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| || |||  ||||||| ||||||||||||||||| |||||||||||||||  | |||||||||||   |||||||||||| ||||||    
T  13415819 acccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaacctttactaatttatccgatgtgggacatataactcacacttgca 13415918  T
Q  101 cacaa 105  Q
    |||||    
T  13415919 cacaa 13415923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 36568630 - 36568730
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    ||||| ||| ||||||| ||||| | ||| ||| ||||||||| |||||||| |||||||||||||||||||||   |||||||||||| ||||||||||    
T  36568630 aaaaccttaaggcaatgggtttacgggtcatctcacttataaggtgttcaacttttacttttctatccgatgtgggacatataactcacacttgcacaca 36568729  T
Q  105 a 105  Q
    |    
T  36568730 a 36568730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 6500549 - 6500451
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| |||||   ||||||||||||||||| ||||||||||||||| || ||||||||||| | |||||||||||| ||||||    
T  6500549 acccaaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacctttactattttatccgatgtgga-catataactcacacttgca 6500451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 32487492 - 32487394
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| |||||||||||||| || ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  32487492 acccaaaaccttaaggcaatgggtttatgggtcctcttacttat-aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 32487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 1028598 - 1028680
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||||||||||||  |||||| |||||||||||||||||||||||   |||||||||||| |||| ||||||    
T  1028598 gtttatgggtcctcttacttataaagtgttcatcctttacttttctatccgatgtgggacatataactcacacttgtacacaa 1028680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 3295405 - 3295506
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 102  Q
    ||||||| ||| ||||||  ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | ||||| |||||| ||| ||||    
T  3295405 ccaaaaccttaaggcaattggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatat-actcacacttccaca 3295503  T
Q  103 caa 105  Q
    |||    
T  3295504 caa 3295506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3295074 - 3295176
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| | | ||||||| ||||||| ||| ||||||||||||| ||||||||||||||| || |||||||||||   ||||| |||||| ||||||    
T  3295074 acccaaaacctcaaggcaatgggtttatgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgggacatat-actcacacttgca 3295172  T
Q  101 caca 104  Q
    ||||    
T  3295173 caca 3295176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 36492293 - 36492380
Alignment:
Q  18 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||| ||||||  ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||||| ||||    
T  36492293 aatgtgtttattggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcaaacaa 36492380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 12662745 - 12662815
Alignment:
Q  35 tcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||||||| |||||||||||||||| || |||||||||||   |||||||||||| |||||||||||    
T  12662745 tcttacttataaaatgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaa 12662815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 35150105 - 35150000
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | |||||  |||||| ||| ||||||||||||| ||||||||||| ||| || |||||||||||   |||||||||||| ||||||    
T  35150105 acccaaaaccttaagacaatggatttatgggtc-tcttacttataaggtgttcaaccttgactcttttatccgatgtgggacatataactcacacttgca 35150007  T
Q  101 cacaata 107  Q
    |||||||    
T  35150006 cacaata 35150000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34753084 - 34753161
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    ||||||||| ||| ||||||  ||||||| ||| ||||||||||||| |||||||| ||||||||||||||| |||||    
T  34753084 acccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggtgttcaacttttacttttctatccaatgtg 34753161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 26074395 - 26074320
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    ||||||| ||||||||||||||||| ||||||| ||||| ||||||||| ||||||   |||||||||||| ||||    
T  26074395 gtttatgggtcctcttacttataaggtgttcaatctttagttttctatctgatgtgggacatataactcacacttg 26074320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 38427610 - 38427555
Alignment:
Q  38 tacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||||||||||||||||||||||||||||| |||||   ||||||||||||    
T  38427610 tacttataagatgttcaacctttacttttctatccaatgtgggacatataactcac 38427555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 35914939 - 35914857
Alignment:
Q  10 tttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 92  Q
    ||||||||||||  |||| | ||| |||||||||||| |||||||||||||||| || |||||||||||   |||||||||||    
T  35914939 tttagggcaatggatttacgggtcttcttacttataaaatgttcaacctttactcttttatccgatgtgtgacatataactca 35914857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 42524792 - 42524719
Alignment:
Q  24 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    |||||| ||||||||| | |||||||||||||| ||||||||||||||||||||||  ||||||| |||| ||||    
T  42524792 tttatgagtcctcttattcataagatgttcaac-tttacttttctatccgatgtgagacatataattcacacttg 42524719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 2411103 - 2411030
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 77  Q
    |||||| ||| |||||| |||||||| || |||||||||| |||||||||||| ||||||| ||||||| ||||    
T  2411103 caaaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaacttttacttctctatccaatgt 2411030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 27502117 - 27502194
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||| ||||||||||||||||| |||| |||||||||| || ||||| |||||   |||||||||||| ||||||    
T  27502117 gtttatgggtcctcttacttataaggtgtttaacctttactattttatccaatgtgggacatataactcacacttgca 27502194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25328034 - 25327958
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 77  Q
    ||||||||| ||| |||| |  ||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||    
T  25328034 acccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacttttactgttttatccgatgt 25327958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 26074841 - 26074945
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| | ||||  ||||||| |||||| ||||||||   ||||||||||||||| || |||||||||||   |||||||||||| |||| |    
T  26074841 acccaaaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtgggacatataactcacacttgta 26074940  T
Q  101 cacaa 105  Q
    |||||    
T  26074941 cacaa 26074945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 26590972 - 26591068
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    |||||| ||| |||| ||| ||||||  |||||||||||||||| ||||||||||||||||||| || |||| || | ||| ||| |||| ||||||    
T  26590972 caaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaacctttacttttcgattcgatatggaacatttaaatcacacttgca 26591068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 31509816 - 31509752
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 79  Q
    ||||||||||||||| ||||||| ||||||||  || |||||||  |||||||||||||||||||    
T  31509816 ggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtga 31509752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 42405655 - 42405759
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| |||| |  ||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||||    |||||||||||| |||| |    
T  42405655 acccaaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaacctttactattttatccgatgttggacatataactcacacttgta 42405754  T
Q  101 cacaa 105  Q
    |||||    
T  42405755 cacaa 42405759  T

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Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 29549316 - 29549413
Alignment:
Q  3 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||| ||| || |||| ||||||| ||| ||||||||||| | |||||| |||||||| || |||| ||| || | |||||||||||| ||||||    
T  29549316 ccaaaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttcatcctttactattttatctgatatggaacatataactcacacttgca 29549413  T

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Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 623882 - 623818
Alignment:
Q  36 cttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||| |||  ||||||||||||||| || ||||||||||||  |||||||||||| ||||||    
T  623882 cttacttgtaaagtgttcaacctttactattatatccgatgtgagacatataactcacacttgca 623818  T

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Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 624295 - 624196
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| | | ||| ||| ||||||| ||| ||||||||||||  ||||||||||||||| || ||| | |||||   |||||||||||| ||||||    
T  624295 acccaaaacctcaaggctatgggtttatgggtcatcttacttataacgtgttcaacctttactattttatacaatgtgggacatataactcacacttgca 624196  T

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Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 15370498 - 15370439
Alignment:
Q  4 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 63  Q
    |||||| ||| ||| ||| ||||||| ||||||||||||||||| |||||||| ||||||    
T  15370498 caaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacatttact 15370439  T

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Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 24489279 - 24489367
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||| ||  ||||||| ||||| |||| ||||||| |||||||||| ||||||   |||||||||||| |||| ||||||    
T  24489279 ggcaatgggtttatgggt--tcttactaataaggtgtttaaccttttcttttctatctgatgtgggacatataactcacacttgaacacaa 24489367  T

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Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 33747856 - 33747793
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 78  Q
    |||||||||||||||  |||||||||||||||  | || |||||||||| || |||||||||||    
T  33747856 ggcaatgagtttatggatcctcttacttataaagtatttaacctttactattttatccgatgtg 33747793  T

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Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36521955 - 36522059
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataaga-tgttcaacctttacttttctatccgatgtgaagcatataactcacccttgc 99  Q
    ||||||||| ||| ||||||  ||||||| ||||||| | ||| |||| ||||||||||  ||||||||||| ||||||   |||||||||||| |||||    
T  36521955 acccaaaaccttaaggcaattggtttatgggtcctctcattta-aagagtgttcaacctcaacttttctatctgatgtgggacatataactcacacttgc 36522053  T
Q  100 acacaa 105  Q
     |||||    
T  36522054 gcacaa 36522059  T

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Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 7768925 - 7768873
Alignment:
Q  25 ttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 77  Q
    ||||| ||||| ||||||||||| ||||||||||||| | || ||||||||||    
T  7768925 ttatgggtccttttacttataaggtgttcaacctttattattttatccgatgt 7768873  T

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Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36522296 - 36522388
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 93  Q
    ||||||||| ||| |  |||| ||||||  ||||||| |||||||| ||||||||| |  | |||||||||| ||||||  ||||||||||||    
T  36522296 acccaaaaccttaagataatgggtttattggtcctctcacttataaaatgttcaacttccatttttctatccaatgtgagacatataactcac 36522388  T

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Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 41635281 - 41635341
Alignment:
Q  32 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 92  Q
    |||||||| ||||||| |||||||| |||||| || |||| |||| ||| |||||||||||    
T  41635281 tcctcttatttataaggtgttcaacatttactcttttatctgatgggaaacatataactca 41635341  T

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Target: scaffold0734 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 5862 - 5772
Alignment:
Q  15 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||||||||||    
T  5862 ggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaa 5772  T

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Target: scaffold0734; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 5491 - 5391
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    ||||||||| | ||||  ||||||| | ||||||||||||||| ||||||||||||||| || ||||||||||    |||||||||||| ||||||||||    
T  5491 aaaactttaagacaatatgtttatgggccctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcacaca 5392  T
Q  105 a 105  Q
    |    
T  5391 a 5391  T

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Target: scaffold0702 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 573 - 670
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    ||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || || ||||||||   |||||||||||| ||||    
T  573 acccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactcacacttg 670  T

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Target: scaffold0702; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 231 - 300
Alignment:
Q  31 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  231 gtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 300  T

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Target: scaffold0391 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1165 - 1269
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||| ||| ||||||| ||||||| ||||| || |||||||| ||||||||||||||| || ||||| |||||   |||||||||||| |||| |    
T  1165 acccaaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgta 1264  T
Q  101 cacaa 105  Q
    |||||    
T  1265 cacaa 1269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 3091 - 3148
Alignment:
Q  48 atgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 105  Q
    |||||||||||||||| || |||||||||||   |||||||||||| | |||||||||    
T  3091 atgttcaacctttactcttttatccgatgtgggacatataactcacacctgcacacaa 3148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 17519 - 17619
Alignment:
Q  5 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 104  Q
    ||||| ||| ||| ||| ||||||| ||||||||||||| ||| ||||||||||||||| || |||| ||||||   |||||||||||| ||||||||||    
T  17519 aaaaccttaaggctatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacaca 17618  T
Q  105 a 105  Q
    |    
T  17619 a 17619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 47459 - 47356
Alignment:
Q  1 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 100  Q
    ||||||||||||| ||||||| |||||||  | |||||||||||||| ||||||| ||||||| || |||| |||||||  ||| ||| |||| ||||||    
T  47459 acccaaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaaactttactattttatcggatgtgagacatttaattcacacttgca 47360  T
Q  101 caca 104  Q
    ||||    
T  47359 caca 47356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 10192 - 10267
Alignment:
Q  23 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 98  Q
    ||||||| ||||||||||||||||| |||||||| |||||  || ||||||||||||  |||||||||||| ||||    
T  10192 gtttatgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactcacacttg 10267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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