View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8903_low_69 (Length: 298)
Name: NF8903_low_69
Description: NF8903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8903_low_69 |
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Alignment Details
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 21 - 283
Target Start/End: Complemental strand, 10024743 - 10024481
Alignment:
| Q |
21 |
gaaataaggagagatgaacctggcctcgtccttgttcctgaatagccttctggaaaatttgttcgctgtcaccggtctcaattaatctgtcaattgtctg |
120 |
Q |
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| T |
10024743 |
gaaataaggagagatgaacctggcctcgtccttgttcctgaatagccttctggaaaatttgttcgctgtcaccggtctcaattaatctgtcaattgtctg |
10024644 |
T |
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| Q |
121 |
tacattgttaaatgattagaagaaaaacttctaaagcaacattttgttcaataaacgaaaaattcagttaaaaaattaccccctcatcagctctcgcgcc |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
10024643 |
tacattgttaaatgattagaagaaaaacttctaaagcaacattttgttcaataaacgaaaaattcagttaaaaaattacctcctcatcagctctcgcgcc |
10024544 |
T |
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| Q |
221 |
ggttactgacaatcacgaaaaccagagaaaacgtaaaattgttaactccaagtcgaggtaatt |
283 |
Q |
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| T |
10024543 |
ggttactgacaatcacgaaaaccagagaaaacgtaaaattgttaactccaagtcgaggtaatt |
10024481 |
T |
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