View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8903_low_95 (Length: 255)
Name: NF8903_low_95
Description: NF8903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8903_low_95 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 15 - 238
Target Start/End: Complemental strand, 33563367 - 33563144
Alignment:
| Q |
15 |
gacatcaacatatctagtttcataaggtgacataactgcactccaaatccctttctgtacacccctccattcatccttttcacactgacaccatccaaga |
114 |
Q |
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| T |
33563367 |
gacatcaacatatctagtttcataaggtgacataactgcactccaaatccctttctgtacacccctccattcatccttttcacactgacaccatccaaga |
33563268 |
T |
|
| Q |
115 |
gtattattcctgcacatacattataaataagaaacgacaactttgacaaaattcaccaaaagtcagaactagaagcgtgtgtgctcccagatgccaagca |
214 |
Q |
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| T |
33563267 |
gtattattcctgcacatacattataaataagaaacgacagctttgacaaaattcaccaaaagtcagaactagaagcgtgtgtgcccccagatgccaagca |
33563168 |
T |
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| Q |
215 |
tgcacctgagagaaggtgttatgt |
238 |
Q |
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|||||||||||||||||||||||| |
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| T |
33563167 |
tgcacctgagagaaggtgttatgt |
33563144 |
T |
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