View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8903_low_99 (Length: 252)

Name: NF8903_low_99
Description: NF8903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8903_low_99
NF8903_low_99
[»] chr8 (9 HSPs)
chr8 (131-252)||(25746776-25746897)
chr8 (113-248)||(15017922-15018055)
chr8 (141-252)||(22070889-22071002)
chr8 (158-252)||(11342636-11342730)
chr8 (164-252)||(21965424-21965512)
chr8 (158-210)||(12480153-12480205)
chr8 (158-210)||(23079186-23079238)
chr8 (132-219)||(28503963-28504055)
chr8 (158-210)||(19698473-19698526)
[»] chr5 (27 HSPs)
chr5 (113-252)||(37294858-37295000)
chr5 (113-248)||(21501076-21501209)
chr5 (113-248)||(19863923-19864056)
chr5 (160-246)||(20580219-20580306)
chr5 (158-243)||(23887592-23887677)
chr5 (158-239)||(23902235-23902316)
chr5 (158-243)||(7816014-7816099)
chr5 (158-243)||(24947483-24947568)
chr5 (158-243)||(24980348-24980433)
chr5 (160-246)||(30465823-30465909)
chr5 (160-248)||(22898874-22898962)
chr5 (130-246)||(25195444-25195562)
chr5 (130-246)||(25210806-25210924)
chr5 (130-246)||(25274958-25275076)
chr5 (160-246)||(22268953-22269039)
chr5 (160-246)||(27285767-27285853)
chr5 (158-210)||(16682569-16682621)
chr5 (160-243)||(24671979-24672064)
chr5 (160-243)||(24741749-24741834)
chr5 (160-243)||(24754518-24754603)
chr5 (160-243)||(24612353-24612438)
chr5 (160-243)||(24708755-24708840)
chr5 (132-243)||(28898476-28898591)
chr5 (132-243)||(28934871-28934986)
chr5 (158-210)||(570951-571003)
chr5 (158-210)||(15494616-15494668)
chr5 (158-210)||(32449605-32449658)
[»] chr6 (24 HSPs)
chr6 (113-248)||(924145-924278)
chr6 (113-248)||(8765262-8765400)
chr6 (131-248)||(20424405-20424520)
chr6 (160-246)||(17086819-17086905)
chr6 (160-246)||(25179418-25179504)
chr6 (132-246)||(4112774-4112895)
chr6 (158-243)||(21792784-21792869)
chr6 (158-243)||(22254220-22254305)
chr6 (154-243)||(17029222-17029314)
chr6 (132-243)||(12963931-12964046)
chr6 (160-246)||(20156143-20156228)
chr6 (160-246)||(22176604-22176689)
chr6 (159-233)||(16767739-16767816)
chr6 (160-218)||(24376640-24376700)
chr6 (132-219)||(14854492-14854584)
chr6 (181-243)||(28197270-28197331)
chr6 (161-241)||(30720828-30720908)
chr6 (158-210)||(31541446-31541498)
chr6 (164-219)||(20134429-20134486)
chr6 (164-219)||(22198383-22198440)
chr6 (171-219)||(12048309-12048358)
chr6 (177-210)||(22923923-22923956)
chr6 (177-210)||(22939635-22939668)
chr6 (177-210)||(23862080-23862113)
[»] chr4 (31 HSPs)
chr4 (113-248)||(18465271-18465404)
chr4 (164-252)||(15376288-15376376)
chr4 (164-252)||(15396112-15396200)
chr4 (158-252)||(16281031-16281125)
chr4 (158-252)||(20757187-20757281)
chr4 (136-252)||(46660067-46660186)
chr4 (114-246)||(15387102-15387235)
chr4 (141-252)||(15269201-15269315)
chr4 (158-252)||(15299544-15299638)
chr4 (164-243)||(15400032-15400111)
chr4 (160-248)||(1662846-1662934)
chr4 (158-243)||(5200026-5200111)
chr4 (158-243)||(18043877-18043962)
chr4 (160-243)||(1895662-1895745)
chr4 (160-246)||(12785487-12785573)
chr4 (160-246)||(16245097-16245183)
chr4 (160-248)||(17086935-17087023)
chr4 (160-243)||(22727610-22727693)
chr4 (160-218)||(26407042-26407101)
chr4 (160-218)||(1910470-1910529)
chr4 (162-246)||(15219403-15219488)
chr4 (162-246)||(17241580-17241665)
chr4 (174-249)||(26461471-26461545)
chr4 (158-210)||(18027841-18027893)
chr4 (188-252)||(24582027-24582092)
chr4 (188-252)||(24596855-24596920)
chr4 (162-219)||(15238159-15238218)
chr4 (158-210)||(40562908-40562960)
chr4 (160-242)||(17094902-17094986)
chr4 (171-219)||(14240125-14240174)
chr4 (158-210)||(9247903-9247955)
[»] chr3 (25 HSPs)
chr3 (113-252)||(16614978-16615115)
chr3 (113-252)||(22051745-22051882)
chr3 (113-248)||(29942467-29942600)
chr3 (113-248)||(29991621-29991754)
chr3 (131-248)||(10929958-10930073)
chr3 (131-248)||(15476017-15476132)
chr3 (158-252)||(36131488-36131582)
chr3 (158-248)||(15371423-15371513)
chr3 (160-248)||(4653988-4654076)
chr3 (158-243)||(15897548-15897633)
chr3 (135-246)||(1985814-1985927)
chr3 (160-246)||(14141854-14141940)
chr3 (160-243)||(11647117-11647201)
chr3 (161-246)||(23011926-23012011)
chr3 (158-243)||(15882369-15882454)
chr3 (154-244)||(15364181-15364277)
chr3 (160-241)||(19704785-19704866)
chr3 (160-246)||(18525719-18525806)
chr3 (181-243)||(19627943-19628004)
chr3 (154-219)||(28166188-28166255)
chr3 (180-243)||(17787704-17787766)
chr3 (180-243)||(19089225-19089287)
chr3 (158-210)||(18046589-18046642)
chr3 (158-210)||(18062652-18062705)
chr3 (158-210)||(34799771-34799824)
[»] chr1 (19 HSPs)
chr1 (113-248)||(16230524-16230657)
chr1 (114-252)||(20456423-20456564)
chr1 (114-252)||(20541671-20541812)
chr1 (164-252)||(15434096-15434184)
chr1 (136-252)||(15816413-15816532)
chr1 (158-243)||(5137655-5137740)
chr1 (158-243)||(26797995-26798080)
chr1 (158-243)||(4147500-4147585)
chr1 (158-243)||(21887066-21887151)
chr1 (160-243)||(20329889-20329974)
chr1 (160-243)||(20343433-20343518)
chr1 (160-243)||(16405648-16405732)
chr1 (160-246)||(16197755-16197843)
chr1 (160-246)||(16212764-16212852)
chr1 (162-246)||(31447702-31447787)
chr1 (132-243)||(16663314-16663429)
chr1 (187-252)||(37884837-37884903)
chr1 (180-219)||(9193007-9193046)
chr1 (158-210)||(24654746-24654797)
[»] chr2 (18 HSPs)
chr2 (131-252)||(22699921-22700045)
chr2 (136-252)||(27388345-27388464)
chr2 (158-252)||(19446375-19446469)
chr2 (158-252)||(19461184-19461278)
chr2 (136-252)||(27399406-27399525)
chr2 (164-252)||(19559896-19559984)
chr2 (137-243)||(17260054-17260165)
chr2 (160-246)||(21693175-21693261)
chr2 (160-246)||(21707957-21708043)
chr2 (136-243)||(18085607-18085717)
chr2 (158-210)||(13064985-13065037)
chr2 (158-210)||(37870477-37870529)
chr2 (181-243)||(10115637-10115698)
chr2 (158-210)||(20831461-20831513)
chr2 (158-210)||(24045189-24045241)
chr2 (158-210)||(17632411-17632464)
chr2 (158-210)||(27424247-27424299)
chr2 (158-210)||(27439291-27439343)
[»] scaffold0211 (1 HSPs)
scaffold0211 (131-248)||(11148-11263)
[»] scaffold0389 (1 HSPs)
scaffold0389 (135-243)||(15423-15529)
[»] scaffold0109 (2 HSPs)
scaffold0109 (136-252)||(16925-17044)
scaffold0109 (136-252)||(31169-31288)
[»] scaffold0174 (1 HSPs)
scaffold0174 (164-252)||(8276-8364)
[»] chr7 (26 HSPs)
chr7 (158-252)||(15004810-15004904)
chr7 (158-252)||(10851743-10851837)
chr7 (158-252)||(13895363-13895457)
chr7 (160-248)||(16439705-16439793)
chr7 (160-248)||(16454606-16454694)
chr7 (158-243)||(16498698-16498783)
chr7 (158-243)||(16507993-16508078)
chr7 (158-243)||(16523109-16523194)
chr7 (154-244)||(23765027-23765120)
chr7 (158-243)||(48217073-48217158)
chr7 (158-243)||(4055222-4055307)
chr7 (160-243)||(30241785-30241868)
chr7 (162-246)||(7369165-7369250)
chr7 (132-243)||(34194381-34194496)
chr7 (132-241)||(34196224-34196337)
chr7 (158-210)||(35971861-35971913)
chr7 (158-210)||(35993273-35993325)
chr7 (181-243)||(16036716-16036777)
chr7 (181-243)||(16051443-16051504)
chr7 (158-210)||(14930041-14930093)
chr7 (158-210)||(18623053-18623105)
chr7 (185-246)||(15854060-15854120)
chr7 (171-218)||(10839496-10839544)
chr7 (158-210)||(18459755-18459807)
chr7 (158-210)||(15353486-15353539)
chr7 (158-210)||(18626909-18626961)
[»] scaffold0609 (1 HSPs)
scaffold0609 (135-246)||(1593-1706)
[»] scaffold0954 (1 HSPs)
scaffold0954 (160-248)||(2706-2794)
[»] scaffold0089 (2 HSPs)
scaffold0089 (158-243)||(25164-25249)
scaffold0089 (158-210)||(51831-51884)
[»] scaffold0092 (1 HSPs)
scaffold0092 (160-246)||(17340-17426)
[»] scaffold0231 (1 HSPs)
scaffold0231 (158-243)||(26456-26541)
[»] scaffold0184 (1 HSPs)
scaffold0184 (160-246)||(22550-22636)
[»] scaffold0078 (1 HSPs)
scaffold0078 (160-246)||(50208-50294)
[»] scaffold0055 (1 HSPs)
scaffold0055 (160-242)||(7524-7606)
[»] scaffold0052 (1 HSPs)
scaffold0052 (160-242)||(76929-77011)
[»] scaffold0322 (1 HSPs)
scaffold0322 (154-243)||(17398-17490)
[»] scaffold0260 (1 HSPs)
scaffold0260 (160-243)||(5756-5841)
[»] scaffold0021 (2 HSPs)
scaffold0021 (160-246)||(99092-99180)
scaffold0021 (160-246)||(180015-180103)
[»] scaffold0355 (1 HSPs)
scaffold0355 (158-210)||(18178-18230)
[»] scaffold0206 (1 HSPs)
scaffold0206 (160-218)||(12445-12504)
[»] scaffold0393 (1 HSPs)
scaffold0393 (132-243)||(6962-7077)
[»] scaffold0099 (1 HSPs)
scaffold0099 (158-243)||(194-282)
[»] scaffold1704 (1 HSPs)
scaffold1704 (158-210)||(725-777)
[»] scaffold0134 (1 HSPs)
scaffold0134 (155-244)||(23280-23375)
[»] scaffold0031 (1 HSPs)
scaffold0031 (171-219)||(125932-125981)
[»] scaffold1665 (1 HSPs)
scaffold1665 (160-210)||(169-221)
[»] scaffold0143 (1 HSPs)
scaffold0143 (171-218)||(22661-22709)


Alignment Details
Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 25746776 - 25746897
Alignment:
Q  131 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaag 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25746776 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaag 25746875  T
Q  231 gacactggactctctataatga 252  Q
    |||| |||||||||||||||||    
T  25746876 gacaatggactctctataatga 25746897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 15017922 - 15018055
Alignment:
Q  113 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 212  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  15017922 agtttagccactttaccttttcaatttctatgtcaaatggacatgtacttttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 15018021  T
Q  213 ctagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||  ||||||||||| |||||||||||||    
T  15018022 ctagggcaa--tgtaaaggacaatggactctctata 15018055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 141 - 252
Target Start/End: Complemental strand, 22071002 - 22070889
Alignment:
Q  141 tatgtcaaatggacatgtaat--tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactgg 238  Q
    ||||| || ||||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  22071002 tatgttaagtggacatgtaatagtctaggtagtttaatttccttttaatttcttacaagaccatagcatgtaaactagggcaaagtgtaaaggacaatgg 22070903  T
Q  239 actctctataatga 252  Q
    ||||||||||||||    
T  22070902 actctctataatga 22070889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 11342730 - 11342636
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  11342730 taattctaggtagtttaatttccttttaatttattgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactctctataatga 11342636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 21965424 - 21965512
Alignment:
Q  164 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  21965424 taggtagtttagtttccttttaatttcttgcaagaccatatcatgtaaactagggcaaagtgtaaaggacaatggactctctataatga 21965512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 12480205 - 12480153
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  12480205 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 12480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 23079186 - 23079238
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  23079186 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 23079238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 28504055 - 28503963
Alignment:
Q  132 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggc 219  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| ||||||||||||||    
T  28504055 ttcaatttctatgttaaagttggcatgtaagtttaggtagtttcaatttctcttttttaatttcttgcaagaccatagtatgtaaactagggc 28503963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 19698473 - 19698526
Alignment:
Q  158 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  19698473 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 19698526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 113 - 252
Target Start/End: Complemental strand, 37295000 - 37294858
Alignment:
Q  113 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgt 209  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||    
T  37295000 agtttaaccactttaccttttcaatttctatgtcaaatggacatgtaatagttctaggtagtttaatttccttttaatttcttgcaagaccatagcatgt 37294901  T
Q  210 aaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  37294900 aaactagggcaaagtgtaaaggacaatggactctctataatga 37294858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 21501076 - 21501209
Alignment:
Q  113 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  21501076 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 21501175  T
Q  213 ctagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||  ||||||||||| |||||||||||||    
T  21501176 ctagggcaa--tgtaaaggacaatggactctctata 21501209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 113 - 248
Target Start/End: Complemental strand, 19864056 - 19863923
Alignment:
Q  113 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| |||||||||||||||||||    
T  19864056 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttatatccttacaagaccatagcatgtaaa 19863957  T
Q  213 ctagggcaaagtgtaaaggacactggactctctata 248  Q
    ||| |||||  ||||||||||| |||||||||||||    
T  19863956 ctatggcaa--tgtaaaggacaatggactctctata 19863923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 20580306 - 20580219
Alignment:
Q  160 attttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  20580306 attttaggtagtttaaattcccttttaatttcttgcaagaccatagcatgtaaactaggacaaagtgtaaaggacaatggactctcta 20580219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 23887592 - 23887677
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  23887592 taattttaggtagattagtttccttttgatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactct 23887677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 23902235 - 23902316
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactgga 239  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  23902235 taattttaggtagattagtttccttttgatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatgga 23902316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 7816014 - 7816099
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7816014 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 7816099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 24947483 - 24947568
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24947483 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 24947568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 24980348 - 24980433
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24980348 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 24980433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 30465909 - 30465823
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  30465909 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 30465823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 22898874 - 22898962
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||| ||| ||||||||||| |||||||||||||    
T  22898874 attttaggtagtttaaatttccttttaatttcttgcaaaaccatagaatgtaaattaggg-aaaatgtaaaggacaatggactctctata 22898962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 25195444 - 25195562
Alignment:
Q  130 ttttcaatttctatgtcaaatggacatgtaat--tttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 226  Q
    |||| ||||||||||| |||  | ||||||||  |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || |||    
T  25195444 tttttaatttctatgttaaaatgtcatgtaatattttaggtagtttaaattcccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 25195542  T
Q  227 aaaggacactggactctcta 246  Q
    || ||||| |||||||||||    
T  25195543 aacggacaatggactctcta 25195562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 25210806 - 25210924
Alignment:
Q  130 ttttcaatttctatgtcaaatggacatgtaat--tttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 226  Q
    |||| ||||||||||| |||  | ||||||||  |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || |||    
T  25210806 tttttaatttctatgttaaaatgtcatgtaatattttaggtagtttaaattcccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 25210904  T
Q  227 aaaggacactggactctcta 246  Q
    || ||||| |||||||||||    
T  25210905 aatggacaatggactctcta 25210924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 25274958 - 25275076
Alignment:
Q  130 ttttcaatttctatgtcaaatggacatgtaat--tttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 226  Q
    |||| ||||||||||| |||  | ||||||||  |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || |||    
T  25274958 tttttaatttctatgttaaaatgtcatgtaatattttaggtagtttaaattcccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 25275056  T
Q  227 aaaggacactggactctcta 246  Q
    || ||||| |||||||||||    
T  25275057 aatggacaatggactctcta 25275076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 22269039 - 22268953
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| || ||||| ||||| |||||||||||    
T  22269039 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggccaa-tgtaacggacaatggactctcta 22268953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 27285853 - 27285767
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  27285853 attttaggtagtttaaatttccttttattttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 27285767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 16682569 - 16682621
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  16682569 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 16682621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 24672064 - 24671979
Alignment:
Q  160 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  24672064 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 24671979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 24741834 - 24741749
Alignment:
Q  160 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  24741834 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 24741749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 24754603 - 24754518
Alignment:
Q  160 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  24754603 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 24754518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 24612438 - 24612353
Alignment:
Q  160 attttaggtagttt-aatttc-ctttt-aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  24612438 attttaggtagtttcaatttctcttttcaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 24612353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 24708840 - 24708755
Alignment:
Q  160 attttaggtagttt-aatttc-ctttt-aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  24708840 attttaggtagtttcaatttctcttttnaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 24708755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 28898591 - 28898476
Alignment:
Q  132 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 226  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||  || |||    
T  28898591 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggtcaa-tgt 28898493  T
Q  227 aaaggacactggactct 243  Q
    || ||||| ||||||||    
T  28898492 aacggacaatggactct 28898476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 28934986 - 28934871
Alignment:
Q  132 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 226  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||  || |||    
T  28934986 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggtcaa-tgt 28934888  T
Q  227 aaaggacactggactct 243  Q
    || ||||| ||||||||    
T  28934887 aacggacaatggactct 28934871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 571003 - 570951
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || |||||||||| |||||||||||||||||||||    
T  571003 taattttaggtagattagttcccttttaattccttgcaagaccatagcatgta 570951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 15494616 - 15494668
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || ||||||||||  ||||||||||||||||||||    
T  15494616 taattttaggtagattagttcccttttaattctttgcaagaccatagcatgta 15494668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 32449658 - 32449605
Alignment:
Q  158 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  32449658 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 32449605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 6e-55; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 924145 - 924278
Alignment:
Q  113 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  924145 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 924244  T
Q  213 ctagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||  ||||||||||| |||||||||||||    
T  924245 ctagggcaa--tgtaaaggacaatggactctctata 924278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 8765262 - 8765400
Alignment:
Q  113 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgt 209  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||    
T  8765262 agttaagccactttaccttttcaatttctatgtcaaatggacatgtaataattctaggtagtttaatttccttttaatttcttgcaagaccatagcatgt 8765361  T
Q  210 aaactagggcaaagtgtaaaggacactggactctctata 248  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  8765362 aaactagggcaaagtgtaaaggacaatggactctctata 8765400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 131 - 248
Target Start/End: Original strand, 20424405 - 20424520
Alignment:
Q  131 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaag 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  || |||||||    
T  20424405 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaactaggg--aaatgtaaag 20424502  T
Q  231 gacactggactctctata 248  Q
    ||||  ||||||| ||||    
T  20424503 gacaacggactctttata 20424520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 17086905 - 17086819
Alignment:
Q  160 attttaggtagttt-aatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| ||||| |||||||||||    
T  17086905 attttaggtagtttcaatttccttttaatttcttgtaagaccatagaatgtaaactagggcaaa-tgtaacggacaatggactctcta 17086819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 25179418 - 25179504
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||| |||||||||||    
T  25179418 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaacggacaatggactctcta 25179504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 4112895 - 4112774
Alignment:
Q  132 ttcaatttctatgtcaaa-tggacatgtaattttaggtagtttaatttcctttt-------aatttcttgcaagaccatagcatgtaaactagggcaaag 223  Q
    |||||||||||||| ||| | | |||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||| ||     
T  4112895 ttcaatttctatgttaaagttggcatgtaattttaggtagtttaatttcctttttttttttaatttcttgcaagaccatagaatgtaaactagggccaa- 4112797  T
Q  224 tgtaaaggacactggactctcta 246  Q
    ||||| ||||| |||||||||||    
T  4112796 tgtaacggacaatggactctcta 4112774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 21792784 - 21792869
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  21792784 taattttaggtagattagctttcttttaattactcgcaagaccatagtatgtgaactagggcaaagtgtaaaggacaatggactct 21792869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 22254305 - 22254220
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  22254305 taattttaggtagattagctttcttttaattactcgcaagaccatagtatgtaaactaaggcaaagtgtaaaggacaatggactct 22254220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 17029314 - 17029222
Alignment:
Q  154 catgtaattttaggtagtttaatttcc----ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||| |||||||||||||||||    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  17029314 catgtaattctaggtagtttaatttccccttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 17029222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 12964046 - 12963931
Alignment:
Q  132 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 226  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||| || |||    
T  12964046 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 12963948  T
Q  227 aaaggacactggactct 243  Q
    || ||||| ||||||||    
T  12963947 aacggacaatggactct 12963931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 20156143 - 20156228
Alignment:
Q  160 attttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||| | || ||||||| ||||||||||||||||| ||||||||||||||  | ||||| ||||| |||||||||||    
T  20156143 attttaggtagttttaatttcttttaaattcttgcaagaccatagaatgtaaactagggccta-tgtaacggacaatggactctcta 20156228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 22176689 - 22176604
Alignment:
Q  160 attttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||| | || ||||||| ||||||||||||||||| ||||||||||||||  | ||||| ||||| |||||||||||    
T  22176689 attttaggtagttttaatttcttttaaattcttgcaagaccatagaatgtaaactagggccta-tgtaacggacaatggactctcta 22176604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 16767816 - 16767739
Alignment:
Q  159 aattttaggtagtttaa-tttcctttt---aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggac 233  Q
    ||||||||||||||||| |||||||||   |||||||||||||||||||| |||||||||||||| || ||||||||||    
T  16767816 aattttaggtagtttaaatttcctttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaaaggac 16767739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 24376640 - 24376700
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgc-aagaccatagcatgtaaactaggg 218  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  24376640 attttaggtagtttaaatttccttttaatttcttgcaaagaccatagaatgtaaactaggg 24376700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 14854492 - 14854584
Alignment:
Q  132 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggc 219  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| ||||||||||||||    
T  14854492 ttcaatttctatgttaaagtcggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggc 14854584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 28197331 - 28197270
Alignment:
Q  181 ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  28197331 ttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 28197270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 30720908 - 30720828
Alignment:
Q  161 ttttaggtagtttaatttcct-tttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggact 241  Q
    ||||||||||||||| |  || ||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||    
T  30720908 ttttaggtagtttaaatcactctttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggact 30720828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 31541446 - 31541498
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || |||||||||| |||||||||||||||||||||    
T  31541446 taattttaggtagattagttcccttttaattccttgcaagaccatagcatgta 31541498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 20134429 - 20134486
Alignment:
Q  164 taggtagtttaattt--ccttttaatttcttgcaagaccatagcatgtaaactagggc 219  Q
    |||||||||||||||  |||||||| | ||||||||||||||| ||||||||||||||    
T  20134429 taggtagtttaattttgccttttaaatccttgcaagaccatagaatgtaaactagggc 20134486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 22198440 - 22198383
Alignment:
Q  164 taggtagtttaattt--ccttttaatttcttgcaagaccatagcatgtaaactagggc 219  Q
    |||||||||||||||  |||||||| | ||||||||||||||| ||||||||||||||    
T  22198440 taggtagtttaattttgccttttaaatccttgcaagaccatagaatgtaaactagggc 22198383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 12048358 - 12048309
Alignment:
Q  171 tttaatttc-cttttaatttcttgcaagaccatagcatgtaaactagggc 219  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  12048358 tttaatttctcttttaaattcttgcaagaccatagaatgtaaactagggc 12048309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 22923956 - 22923923
Alignment:
Q  177 ttccttttaatttcttgcaagaccatagcatgta 210  Q
    |||||||||||| |||||||||||||||||||||    
T  22923956 ttccttttaattccttgcaagaccatagcatgta 22923923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 22939668 - 22939635
Alignment:
Q  177 ttccttttaatttcttgcaagaccatagcatgta 210  Q
    |||||||||||| |||||||||||||||||||||    
T  22939668 ttccttttaattccttgcaagaccatagcatgta 22939635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 23862113 - 23862080
Alignment:
Q  177 ttccttttaatttcttgcaagaccatagcatgta 210  Q
    |||||||||||| |||||||||||||||||||||    
T  23862113 ttccttttaattccttgcaagaccatagcatgta 23862080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 6e-55; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 113 - 248
Target Start/End: Complemental strand, 18465404 - 18465271
Alignment:
Q  113 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  18465404 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 18465305  T
Q  213 ctagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||  ||||||||||| |||||||||||||    
T  18465304 ctagggcaa--tgtaaaggacaatggactctctata 18465271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 15376376 - 15376288
Alignment:
Q  164 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15376376 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctataatga 15376288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 15396200 - 15396112
Alignment:
Q  164 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15396200 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctataatga 15396112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 158 - 252
Target Start/End: Original strand, 16281031 - 16281125
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  16281031 taattctaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactctctataatga 16281125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 158 - 252
Target Start/End: Original strand, 20757187 - 20757281
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20757187 taattctaggtagtttaatttccttttagtttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctataatga 20757281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 46660067 - 46660186
Alignment:
Q  136 atttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 232  Q
    |||| ||||| || ||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46660067 atttttatgttaagtggacatgtaatagttctaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 46660166  T
Q  233 cactggactctctataatga 252  Q
    ||  ||||||||||||||||    
T  46660167 caagggactctctataatga 46660186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 114 - 246
Target Start/End: Original strand, 15387102 - 15387235
Alignment:
Q  114 gtttagccactttcccttttcaatttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    |||||||||||||  |||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15387102 gtttagccactttatcttt-caatttctatgtcaaatggacatgtaataattttaggtagtttaatttccttttaatttcttgcaagaccatagaatgta 15387200  T
Q  211 aactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||| || || ||||| ||||| |||||||||||    
T  15387201 aactagagccaa-tgtaacggacaatggactctcta 15387235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 141 - 252
Target Start/End: Complemental strand, 15269315 - 15269201
Alignment:
Q  141 tatgtcaaatggacatgtaat--ttta-ggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactg 237  Q
    |||||||| ||||||||||||  || | |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||    
T  15269315 tatgtcaagtggacatgtaataattcatggtagtttaatttccttttaatttcttgcaagacaatagcatgtaaattagggcaaagtgtaaaggacaatg 15269216  T
Q  238 gactctctataatga 252  Q
     ||||||||||||||    
T  15269215 tactctctataatga 15269201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 15299638 - 15299544
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  15299638 taattctaggtagtttaatttccttttaattttttgcaagaccataggatgtaaattagagcaaagtgtaaaggacaatggactctctataatga 15299544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 15400111 - 15400032
Alignment:
Q  164 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15400111 taggtagtttaatttccttttaattactagcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 15400032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 1662846 - 1662934
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||||    
T  1662846 attttaggtagtttaagtttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctctata 1662934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 5200111 - 5200026
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5200111 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 5200026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 18043877 - 18043962
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18043877 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 18043962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 1895662 - 1895745
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||    
T  1895662 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaaaggacaatggactct 1895745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 12785487 - 12785573
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  12785487 attttaggtagtttaagtttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 12785573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 16245183 - 16245097
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  16245183 attttaggtagtttaagtttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 16245097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 17086935 - 17087023
Alignment:
Q  160 attttaggtagtttaatt-tccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||| ||||    
T  17086935 attttaggtagtttaaatctccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaaaggacaatggactctttata 17087023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 22727693 - 22727610
Alignment:
Q  160 attttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||| |||  || ||||||||| || |||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  22727693 attttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagagcaaagtgtaaaggacgatggactct 22727610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 26407101 - 26407042
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactaggg 218  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  26407101 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaactaggg 26407042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 1910470 - 1910529
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactaggg 218  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||    
T  1910470 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattaggg 1910529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 15219403 - 15219488
Alignment:
Q  162 tttaggtagtttaatttc--cttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||| | |||  ||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  15219403 tttaggtagttttaattcttcttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 15219488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 17241580 - 17241665
Alignment:
Q  162 tttaggtagtttaatttcct--tttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||| | |||||  ||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  17241580 tttaggtagttttaattcctcttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 17241665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 26461545 - 26461471
Alignment:
Q  174 aatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataa 249  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||||||||    
T  26461545 aattcccttttaaattcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctctataa 26461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 18027893 - 18027841
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  18027893 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 18027841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 24582092 - 24582027
Alignment:
Q  188 ttcttgcaagaccatagcatgtaaactagggcaaagtgt-aaaggacactggactctctataatga 252  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||||| |||||| ||| ||||||    
T  24582092 ttcttgcaagaccttagcatgtaaactaggacaaagtgtaaaaggacaatggactatctctaatga 24582027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 24596920 - 24596855
Alignment:
Q  188 ttcttgcaagaccatagcatgtaaactagggcaaagtgt-aaaggacactggactctctataatga 252  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||||| |||||| ||| ||||||    
T  24596920 ttcttgcaagaccttagcatgtaaactaggacaaagtgtaaaaggacaatggactatctctaatga 24596855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 15238159 - 15238218
Alignment:
Q  162 tttaggtagtttaatttc--cttttaatttcttgcaagaccatagcatgtaaactagggc 219  Q
    |||||||||||| | |||  ||||||||||||||||||||||||| ||||||||||||||    
T  15238159 tttaggtagttttaattcttcttttaatttcttgcaagaccatagaatgtaaactagggc 15238218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 40562908 - 40562960
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || |||||||||| |||||||||||||||||||||    
T  40562908 taattttaggtagattagttcccttttaattccttgcaagaccatagcatgta 40562960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 17094902 - 17094986
Alignment:
Q  160 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactc 242  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||| | || ||||| ||||| |||||||    
T  17094902 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactaggaccaa-tgtaacggacaatggactc 17094986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 14240174 - 14240125
Alignment:
Q  171 tttaatttc-cttttaatttcttgcaagaccatagcatgtaaactagggc 219  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  14240174 tttaatttctcttttaaattcttgcaagaccatagaatgtaaactagggc 14240125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 9247955 - 9247903
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||| ||| ||| || | |||||||| |||||||||||||||||||||    
T  9247955 taattttagatagattagttcctttttaattccttgcaagaccatagcatgta 9247903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 6e-55; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 113 - 252
Target Start/End: Complemental strand, 16615115 - 16614978
Alignment:
Q  113 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 212  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  16615115 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattctttacaagaccatagcatgtaaa 16615016  T
Q  213 ctagggcaaagtgtaaaggacactggactctctataatga 252  Q
    |||||||||  ||||||||||| |||||||||||||||||    
T  16615015 ctagggcaa--tgtaaaggacaatggactctctataatga 16614978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 113 - 252
Target Start/End: Original strand, 22051745 - 22051882
Alignment:
Q  113 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 212  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  22051745 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattctttacaagaccatagcatgtaaa 22051844  T
Q  213 ctagggcaaagtgtaaaggacactggactctctataatga 252  Q
    |||||||||  ||||||||||| |||||||||||||||||    
T  22051845 ctagggcaa--tgtaaaggacaatggactctctataatga 22051882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 29942467 - 29942600
Alignment:
Q  113 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  29942467 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 29942566  T
Q  213 ctagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||  ||||||||||| |||||||||||||    
T  29942567 ctagggcaa--tgtaaaggacaatggactctctata 29942600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 29991621 - 29991754
Alignment:
Q  113 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  29991621 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 29991720  T
Q  213 ctagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||  ||||||||||| |||||||||||||    
T  29991721 ctagggcaa--tgtaaaggacaatggactctctata 29991754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 131 - 248
Target Start/End: Complemental strand, 10930073 - 10929958
Alignment:
Q  131 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaag 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  || |||||||    
T  10930073 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaactaggg--aaatgtaaag 10929976  T
Q  231 gacactggactctctata 248  Q
    |||| || ||||||||||    
T  10929975 gacaatgaactctctata 10929958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 131 - 248
Target Start/End: Complemental strand, 15476132 - 15476017
Alignment:
Q  131 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaag 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||  || |||||||    
T  15476132 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaaataggg--aaatgtaaag 15476035  T
Q  231 gacactggactctctata 248  Q
    |||| |||||||| ||||    
T  15476034 gacaatggactctttata 15476017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 36131582 - 36131488
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36131582 taattctaggtagtttaatttccttttagtttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctataatga 36131488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 15371423 - 15371513
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctata 248  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15371423 taattctaggtagtttaatttccttttagtttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctata 15371513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 4653988 - 4654076
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||  |||| ||||| |||||||||||||    
T  4653988 attttaggtagtttaagtttccttttaatttcttgcaagaccatagaatgtaaactagggcaaa-cgtaacggacaatggactctctata 4654076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 15897633 - 15897548
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15897633 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 15897548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 1985927 - 1985814
Alignment:
Q  135 aatttctatgtcaaatggacatgtaat--tttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagg 231  Q
    |||||||||||||||  | ||||||||  |||||||||||||| |||| |||| ||||||||||||||||||| ||||||||||||||||| ||||| ||    
T  1985927 aatttctatgtcaaaatgtcatgtaatattttaggtagtttaaatttctttttgatttcttgcaagaccatagaatgtaaactagggcaaa-tgtaacgg 1985829  T
Q  232 acactggactctcta 246  Q
    ||| |||||||||||    
T  1985828 acaatggactctcta 1985814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 14141940 - 14141854
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||| |||||||||||    
T  14141940 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaacggacaatggactctcta 14141854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 11647201 - 11647117
Alignment:
Q  160 attttaggtagtttaattt--ccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||    
T  11647201 attttaggtagtttaattttcccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaaaggacaatggactct 11647117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 23012011 - 23011926
Alignment:
Q  161 ttttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  23012011 ttttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 23011926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 15882454 - 15882369
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  15882454 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactatggcaaagtgtaaaggacaatggactct 15882369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 15364277 - 15364181
Alignment:
Q  154 catgtaattttaggtagtttaatttcc-------ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctc 244  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||    
T  15364277 catgtaattttaggtagtttaatttcccttttttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctc 15364181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 19704785 - 19704866
Alignment:
Q  160 attttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggact 241  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||    
T  19704785 attttaggtagtttaaattcccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggact 19704866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 18525719 - 18525806
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttg-caagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||| ||||||||| ||||| ||||| |||||||||||    
T  18525719 attttaggtagtttaaatttccttttaattttttgtcaagaccatagaatgtaaattagggcaaa-tgtaacggacaatggactctcta 18525806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 19628004 - 19627943
Alignment:
Q  181 ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  19628004 ttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 19627943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 28166255 - 28166188
Alignment:
Q  154 catgtaattttaggtagtttaa--tttccttttaatttcttgcaagaccatagcatgtaaactagggc 219  Q
    ||||||| |||||||||||| |  ||| ||||||| ||||||||||||||||| ||||||||||||||    
T  28166255 catgtaaatttaggtagtttcaatttttcttttaaattcttgcaagaccatagaatgtaaactagggc 28166188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 17787704 - 17787766
Alignment:
Q  180 cttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||||||||||||||| |||||||| ||||| || ||||| ||||| ||||||||    
T  17787704 cttttaatttcttgcaagaccatagaatgtaaaccagggccaa-tgtaacggacaatggactct 17787766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 19089225 - 19089287
Alignment:
Q  180 cttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||||||||||||||| |||||||| ||||| || ||||| ||||| ||||||||    
T  19089225 cttttaatttcttgcaagaccatagaatgtaaacaagggccaa-tgtaacggacaatggactct 19089287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 18046589 - 18046642
Alignment:
Q  158 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  18046589 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 18046642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 18062652 - 18062705
Alignment:
Q  158 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  18062652 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 18062705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 34799824 - 34799771
Alignment:
Q  158 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  34799824 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 34799771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 1e-52; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 16230524 - 16230657
Alignment:
Q  113 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  16230524 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 16230623  T
Q  213 ctagggcaaagtgtaaaggacactggactctctata 248  Q
    ||||| |||  ||||||||||| |||||||||||||    
T  16230624 ctaggacaa--tgtaaaggacaatggactctctata 16230657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 114 - 252
Target Start/End: Original strand, 20456423 - 20456564
Alignment:
Q  114 gtttagccactttcccttttcaatttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||| | ||||||||||| ||||||||||||    
T  20456423 gtttagccactttaccttttcaatttctatgtcaaatggacatgtaataattttaggtagcttaatttcctttaagtttcttgcaaggccatagcatgta 20456522  T
Q  211 aactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  20456523 aactagggcaaagtgtaaaggacaatggactctctataatga 20456564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 114 - 252
Target Start/End: Original strand, 20541671 - 20541812
Alignment:
Q  114 gtttagccactttcccttttcaatttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||| | ||||||||||| ||||||||||||    
T  20541671 gtttagccactttaccttttcaatttctatgtcaaatggacatgtaataattttaggtagcttaatttcctttaagtttcttgcaaggccatagcatgta 20541770  T
Q  211 aactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  20541771 aactagggcaaagtgtaaaggacaatggactctctataatga 20541812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 15434096 - 15434184
Alignment:
Q  164 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15434096 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctataatga 15434184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 136 - 252
Target Start/End: Complemental strand, 15816532 - 15816413
Alignment:
Q  136 atttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 232  Q
    |||| ||||| |||||||||||||||   | ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  15816532 atttttatgttaaatggacatgtaataattctaggtagtttaatttccttttagcttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 15816433  T
Q  233 cactggactctctataatga 252  Q
    || |||||||||||||||||    
T  15816432 caatggactctctataatga 15816413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 5137655 - 5137740
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5137655 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 5137740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 26797995 - 26798080
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26797995 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 26798080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 4147585 - 4147500
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || | ||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4147585 taattttaggtagattagctttcctttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 4147500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 21887151 - 21887066
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||| |||||||| |||  || |||||| || || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21887151 taatcttaggtagattagctttcttttagttactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacagtggactct 21887066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 20329974 - 20329889
Alignment:
Q  160 attttaggtagtttaa--tttcctttt-aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||    
T  20329974 attttaggtagtttaaaatttcctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaaaggacaatggactct 20329889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 20343518 - 20343433
Alignment:
Q  160 attttaggtagtttaa--tttcctttt-aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||    
T  20343518 attttaggtagtttaaaatttcctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaaaggacaatggactct 20343433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 16405648 - 16405732
Alignment:
Q  160 attttaggtagtttaa-tttcctttt-aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||    
T  16405648 attttagggagtttaaatttcctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaaaggacaatggactct 16405732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 16197843 - 16197755
Alignment:
Q  160 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  16197843 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 16197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 16212852 - 16212764
Alignment:
Q  160 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  16212852 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 16212764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 31447787 - 31447702
Alignment:
Q  162 tttaggtagtttaatttcct--tttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||| | |||||  ||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  31447787 tttaggtagttttaattcctcttttaatttcttgcaagatcatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 31447702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 16663429 - 16663314
Alignment:
Q  132 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 226  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||  || |||    
T  16663429 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggtcaa-tgt 16663331  T
Q  227 aaaggacactggactct 243  Q
    || ||||| ||||||||    
T  16663330 aacggacaatggactct 16663314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 37884903 - 37884837
Alignment:
Q  187 tttcttgcaagaccatagcatgtaaactagggcaaagtgt-aaaggacactggactctctataatga 252  Q
    |||||||||||||| |||||||||||||||| |||||||| |||||||| |||||| ||| ||||||    
T  37884903 tttcttgcaagaccttagcatgtaaactaggacaaagtgtaaaaggacaatggactatctctaatga 37884837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 9193046 - 9193007
Alignment:
Q  180 cttttaatttcttgcaagaccatagcatgtaaactagggc 219  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  9193046 cttttaatttcttgcaagaccatagaatgtaaactagggc 9193007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 24654746 - 24654797
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    |||||||||| || ||| ||||||||||||| |||||||||||||||||||||    
T  24654746 taattttagg-agattagtttccttttaattccttgcaagaccatagcatgta 24654797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 22699921 - 22700045
Alignment:
Q  131 tttcaatttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgta 227  Q
    |||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22699921 tttcaatttctatgtcaaatggacatgtaatagttctaggtagtttaatttccttttaatttcttgcaagaccataacatgtaaactagggcaaagtgta 22700020  T
Q  228 aaggacactggactctctataatga 252  Q
    ||||||| || |||||||| |||||    
T  22700021 aaggacaatgaactctctacaatga 22700045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 27388345 - 27388464
Alignment:
Q  136 atttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 232  Q
    |||||||||| || ||||||||||||   | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27388345 atttctatgttaagtggacatgtaatagttctaggtagtttaatttccttttaatttcttgcaagaccatagtatgtaaactagggcaaagtgtaaagga 27388444  T
Q  233 cactggactctctataatga 252  Q
    || |||||||||||||||||    
T  27388445 caatggactctctataatga 27388464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 19446469 - 19446375
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  19446469 taattctaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactctctataatga 19446375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 19461278 - 19461184
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  19461278 taattctaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactctctataatga 19461184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 27399406 - 27399525
Alignment:
Q  136 atttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 232  Q
    |||||||||| || ||||||||||||   | |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27399406 atttctatgttaagtggacatgtaatagttctaggtagtttaatttcattttaatttcttgcaagaccatagtatgtaaactagggcaaagtgtaaagga 27399505  T
Q  233 cactggactctctataatga 252  Q
    || |||||||||||||||||    
T  27399506 caatggactctctataatga 27399525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 19559984 - 19559896
Alignment:
Q  164 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  19559984 taggtagtttaatttccttttaatttcttgcaagaccatatcatgtaaactagggcaaagtgtaaaggacaatggactctctataatga 19559896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 17260054 - 17260165
Alignment:
Q  137 tttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagg 231  Q
    ||||||||||||| | ||||||||| |||||||||||| ||||||    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17260054 tttctatgtcaaaattgacatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaagg 17260153  T
Q  232 acactggactct 243  Q
    ||| ||||||||    
T  17260154 acaatggactct 17260165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 21693261 - 21693175
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||    
T  21693261 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaaaggacaatggactctcta 21693175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 21708043 - 21707957
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||    
T  21708043 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaaaggacaatggactctcta 21707957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 18085607 - 18085717
Alignment:
Q  136 atttctatgtcaaa-tggacatgtaattttaggtagttt-aatttc--cttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagg 231  Q
    |||||||||| ||| | ||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||| || ||||| ||    
T  18085607 atttctatgttaaagttgacatgtaaatttaggtagtttcaatttctccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacgg 18085705  T
Q  232 acactggactct 243  Q
    ||| ||||||||    
T  18085706 acaatggactct 18085717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 13064985 - 13065037
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  13064985 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 13065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 37870529 - 37870477
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  37870529 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 37870477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 10115698 - 10115637
Alignment:
Q  181 ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  10115698 ttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 10115637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 20831461 - 20831513
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| | ||||||||||| |||||||||||||||||||||    
T  20831461 taattttaggtagattagtctccttttaattccttgcaagaccatagcatgta 20831513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 24045189 - 24045241
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || |||||||||| |||||||||||||||||||||    
T  24045189 taattttaggtagattagttcccttttaattccttgcaagaccatagcatgta 24045241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 17632411 - 17632464
Alignment:
Q  158 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  17632411 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 17632464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 27424299 - 27424247
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| | ||||||||||| ||||||||| |||| ||||||    
T  27424299 taattttaggtagattagtctccttttaattccttgcaagaacataccatgta 27424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 27439343 - 27439291
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| | ||||||||||| ||||||||| |||| ||||||    
T  27439343 taattttaggtagattagtctccttttaattccttgcaagaacataccatgta 27439291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 131 - 248
Target Start/End: Complemental strand, 11263 - 11148
Alignment:
Q  131 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaag 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  || |||||||    
T  11263 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaactaggg--aaatgtaaag 11166  T
Q  231 gacactggactctctata 248  Q
    |||| |||||||| ||||    
T  11165 gacaatggactctttata 11148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 15529 - 15423
Alignment:
Q  135 aatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggaca 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||||||||||    
T  15529 aatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaactagggcaa--tgtaaaggaca 15432  T
Q  235 ctggactct 243  Q
     ||||||||    
T  15431 atggactct 15423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 16925 - 17044
Alignment:
Q  136 atttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 232  Q
    |||||||||| || ||||||||||||   | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16925 atttctatgttaagtggacatgtaatagttctaggtagtttaattcccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 17024  T
Q  233 cactggactctctataatga 252  Q
    || |||||||||||||||||    
T  17025 caatggactctctataatga 17044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 31169 - 31288
Alignment:
Q  136 atttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 232  Q
    |||||||||| || ||||||||||||   | |||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  31169 atttctatgttaagtggacatgtaatagttctaggtagtttaattcccttttaatttcttgcaagaccataacatgtaaactaaggcaaagtgtaaagga 31268  T
Q  233 cactggactctctataatga 252  Q
    || |||||||||||||||||    
T  31269 caatggactctctataatga 31288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 8276 - 8364
Alignment:
Q  164 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8276 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctataatga 8364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 15004904 - 15004810
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  15004904 taattctaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactctctataatga 15004810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 158 - 252
Target Start/End: Original strand, 10851743 - 10851837
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||    
T  10851743 taattctaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaatttgggcaaagtgtaaaggacaatggactctctataatga 10851837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 13895457 - 13895363
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatga 252  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  13895457 taattctaggtagtttaattaccttttaatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactctctataatga 13895363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 16439793 - 16439705
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||  ||||||||||||    
T  16439793 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaaaggacaacggactctctata 16439705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 16454694 - 16454606
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||  ||||||||||||    
T  16454694 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaaaggacaacggactctctata 16454606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 16498783 - 16498698
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16498783 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 16498698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 16508078 - 16507993
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16508078 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 16507993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 16523194 - 16523109
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16523194 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 16523109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 23765027 - 23765120
Alignment:
Q  154 catgtaattttaggtagtttaatttcc----ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctc 244  Q
    |||||||||||||||||||||||||||    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||    
T  23765027 catgtaattttaggtagtttaatttccctttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctc 23765120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 48217073 - 48217158
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  48217073 taattttaggtagattagctttcttttaattactcgcaagaccatagtatgtaaactagggcaaagtgtaaaggacaatggactct 48217158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 4055222 - 4055307
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  4055222 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagtgcaaagtgtaaaggactatggactct 4055307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 30241868 - 30241785
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||| ||||| ||||||||    
T  30241868 attttaggtagtttaaatttccttttaatttcttgcaagatcatagaatgtaaattagggcaaa-tgtaacggacaatggactct 30241785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 7369165 - 7369250
Alignment:
Q  162 tttaggtagtttaatttcct--tttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||| | |||||  ||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  7369165 tttaggtagttttaattcctcttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 7369250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 34194381 - 34194496
Alignment:
Q  132 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 226  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||| || |||    
T  34194381 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 34194479  T
Q  227 aaaggacactggactct 243  Q
    || ||||| ||||||||    
T  34194480 aacggacaatggactct 34194496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 34196337 - 34196224
Alignment:
Q  132 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 226  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||| || |||    
T  34196337 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 34196239  T
Q  227 aaaggacactggact 241  Q
    || ||||| ||||||    
T  34196238 aacggacaatggact 34196224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 35971861 - 35971913
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  35971861 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 35971913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 35993273 - 35993325
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  35993273 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 35993325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 16036716 - 16036777
Alignment:
Q  181 ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  16036716 ttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 16036777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 16051443 - 16051504
Alignment:
Q  181 ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  16051443 ttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 16051504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 14930093 - 14930041
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| |||||||||||||  ||||||||||||||||||||    
T  14930093 taattttaggtagattagtttccttttaattctttgcaagaccatagcatgta 14930041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 18623053 - 18623105
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  18623053 taattttaggtagattagtttcctcttaattccttgcaagaccatagcatgta 18623105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 15854060 - 15854120
Alignment:
Q  185 aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||||||| |||||||||||||| || ||||| ||||| || ||||||||    
T  15854060 aatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatgaactctcta 15854120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 10839544 - 10839496
Alignment:
Q  171 tttaatttc-cttttaatttcttgcaagaccatagcatgtaaactaggg 218  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  10839544 tttaatttctcttttaaattcttgcaagaccatagaatgtaaactaggg 10839496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 18459807 - 18459755
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| |||| || ||||||||| || ||||||||||||||||||    
T  18459807 taattttaggtagattaactttcttttaattactcgcaagaccatagcatgta 18459755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 15353539 - 15353486
Alignment:
Q  158 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  15353539 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 15353486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 18626909 - 18626961
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||  ||| | ||||||||||| ||||||||||| |||||||||    
T  18626909 taattttaggtaaattagtctccttttaattccttgcaagaccgtagcatgta 18626961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 1706 - 1593
Alignment:
Q  135 aatttctatgtcaaatggacatgtaattttaggtagtttaatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagg 231  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| || ||||| ||    
T  1706 aatttctatgttaaaatggcatgtaattttaggtagtttaatttcccttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacgg 1608  T
Q  232 acactggactctcta 246  Q
    ||| |||||||||||    
T  1607 acaatggactctcta 1593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 2706 - 2794
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctata 248  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||||    
T  2706 attttaggtagtttaagtttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctctata 2794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 25164 - 25249
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  25164 taattttaggtagattagctttcttttaattacttgcaaaaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 25249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 51884 - 51831
Alignment:
Q  158 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  51884 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 51831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 17340 - 17426
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  17340 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 17426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 26541 - 26456
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  26541 taattttaggtagattagctttcttttaattactcgcaagaccatagtatgtaaactagggcaaagtgtaaaggacaatggactct 26456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 22550 - 22636
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  22550 attttaggtagtttaaatttccttttaacttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 22636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 50294 - 50208
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  50294 attttaggtagtttaaatttccttttaacttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 50208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 7606 - 7524
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactc 242  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||    
T  7606 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactc 7524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 76929 - 77011
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactc 242  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||    
T  76929 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactc 77011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 17398 - 17490
Alignment:
Q  154 catgtaattttaggtagtttaatttcc----ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||| |||||||||||||||||    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  17398 catgtaattctaggtagtttaatttccccttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 17490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 5841 - 5756
Alignment:
Q  160 attttaggtagtttaa--tttcctttt-aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 243  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||    
T  5841 attttaggtagtttaaaatttcctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaaaggacaatggactct 5756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 99092 - 99180
Alignment:
Q  160 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||    
T  99092 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggcaaa-tgtaacggacaatggactctcta 99180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 180015 - 180103
Alignment:
Q  160 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 246  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||    
T  180015 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggcaaa-tgtaacggacaatggactctcta 180103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 18178 - 18230
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  18178 taattttaggtagattagtttccttttaatttcttgcaagaccatagcatgta 18230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 12445 - 12504
Alignment:
Q  160 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactaggg 218  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  12445 attttaggtagtttaaatttccttttattttcttgcaagaccatagaatgtaaactaggg 12504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 6962 - 7077
Alignment:
Q  132 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 226  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||| || |||    
T  6962 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 7060  T
Q  227 aaaggacactggactct 243  Q
    || ||||| ||||||||    
T  7061 aacggacaatggactct 7077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 282 - 194
Alignment:
Q  158 taattttaggtagtttaatttccttttaattt-cttgcaagaccatagcat-gtaaactaggg-caaagtgtaaaggacactggactct 243  Q
    ||||||||||||| |||  || |||||||||| || ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  282 taattttaggtagattagctttcttttaatttactcgcaagaccatagcattgtaaactagggtcaaagtgtaaaggacaatggactct 194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1704 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1704
Description:

Target: scaffold1704; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 777 - 725
Alignment:
Q  158 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 210  Q
    ||||||||||||| ||| | ||||||||||| |||||||||||||||||||||    
T  777 taattttaggtagattagtctccttttaattccttgcaagaccatagcatgta 725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 23280 - 23375
Alignment:
Q  155 atgtaattttaggtagtttaatttcc-------ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctc 244  Q
    ||||||||||||||||||||||||||       ||||||||| | |||||||||||| |||||||||||||| ||  |||| ||||| |||||||||    
T  23280 atgtaattttaggtagtttaatttcctttttttttttaatttatcgcaagaccatagaatgtaaactagggccaa-cgtaacggacaatggactctc 23375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 125932 - 125981
Alignment:
Q  171 tttaatttc-cttttaatttcttgcaagaccatagcatgtaaactagggc 219  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  125932 tttaatttctcttttaaattcttgcaagaccatagaatgtaaactagggc 125981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1665 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1665
Description:

Target: scaffold1665; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 221 - 169
Alignment:
Q  160 attttaggtagttt-aatttcc-ttttaatttcttgcaagaccatagcatgta 210  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  221 attttaggtagtttcaatttcccttttaattttttgcaagaccatagcatgta 169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 22661 - 22709
Alignment:
Q  171 tttaatttc-cttttaatttcttgcaagaccatagcatgtaaactaggg 218  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  22661 tttaatttctcttttaaattcttgcaagaccatagaatgtaaactaggg 22709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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