View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8904_low_23 (Length: 273)

Name: NF8904_low_23
Description: NF8904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8904_low_23
NF8904_low_23
[»] chr7 (60 HSPs)
chr7 (3-273)||(18981309-18981577)
chr7 (3-273)||(15925860-15926129)
chr7 (3-273)||(16480338-16480596)
chr7 (3-273)||(36051157-36051426)
chr7 (5-273)||(2192101-2192366)
chr7 (3-273)||(16210273-16210542)
chr7 (5-260)||(7291358-7291612)
chr7 (3-189)||(11582243-11582428)
chr7 (125-273)||(13038670-13038817)
chr7 (3-199)||(13038507-13038702)
chr7 (3-97)||(10988279-10988373)
chr7 (3-97)||(11514789-11514883)
chr7 (3-97)||(25293680-25293774)
chr7 (3-97)||(30263526-30263620)
chr7 (3-97)||(42057565-42057659)
chr7 (3-188)||(12545115-12545306)
chr7 (3-188)||(15823813-15824004)
chr7 (3-98)||(26010593-26010688)
chr7 (3-97)||(7821591-7821685)
chr7 (3-97)||(7828902-7828996)
chr7 (3-97)||(13912515-13912609)
chr7 (3-97)||(27102949-27103043)
chr7 (3-97)||(27110297-27110391)
chr7 (3-97)||(27175283-27175377)
chr7 (3-97)||(38785041-38785135)
chr7 (3-162)||(13867477-13867644)
chr7 (3-97)||(16417134-16417228)
chr7 (3-98)||(2436290-2436386)
chr7 (3-188)||(47288345-47288536)
chr7 (162-273)||(11582431-11582543)
chr7 (3-98)||(15525886-15525982)
chr7 (5-162)||(142221-142386)
chr7 (3-159)||(44863840-44864004)
chr7 (3-97)||(18255224-18255319)
chr7 (3-97)||(13757246-13757341)
chr7 (3-97)||(15442961-15443055)
chr7 (3-97)||(15952496-15952591)
chr7 (3-70)||(13571525-13571592)
chr7 (105-162)||(18305315-18305372)
chr7 (3-97)||(26071668-26071763)
chr7 (3-97)||(26095455-26095550)
chr7 (5-98)||(369552-369646)
chr7 (5-97)||(15761775-15761866)
chr7 (5-96)||(1938176-1938266)
chr7 (21-96)||(12753549-12753624)
chr7 (5-97)||(32495960-32496052)
chr7 (218-261)||(11582430-11582473)
chr7 (206-256)||(13867589-13867639)
chr7 (206-256)||(18305317-18305367)
chr7 (19-96)||(45453676-45453754)
chr7 (5-97)||(125493-125585)
chr7 (5-97)||(3058714-3058806)
chr7 (5-97)||(3893762-3893854)
chr7 (5-97)||(2027223-2027316)
chr7 (49-96)||(11285878-11285925)
chr7 (205-256)||(12545226-12545277)
chr7 (206-252)||(11582348-11582394)
chr7 (42-96)||(12249556-12249610)
chr7 (5-97)||(112702-112794)
chr7 (120-157)||(13038705-13038742)
[»] chr6 (51 HSPs)
chr6 (3-273)||(19608993-19609261)
chr6 (3-273)||(18088111-18088380)
chr6 (49-273)||(18740945-18741167)
chr6 (3-273)||(18004373-18004643)
chr6 (50-273)||(18843267-18843489)
chr6 (50-273)||(18825206-18825428)
chr6 (3-273)||(13622514-13622790)
chr6 (5-260)||(15736583-15736844)
chr6 (3-157)||(17343683-17343838)
chr6 (3-157)||(22227040-22227195)
chr6 (3-157)||(35017082-35017236)
chr6 (3-97)||(14628009-14628103)
chr6 (164-273)||(35017201-35017311)
chr6 (162-273)||(22227158-22227269)
chr6 (3-97)||(16230251-16230345)
chr6 (3-97)||(23993831-23993925)
chr6 (3-97)||(10487549-10487643)
chr6 (3-97)||(16377684-16377778)
chr6 (3-97)||(16385008-16385102)
chr6 (3-97)||(26088505-26088599)
chr6 (3-99)||(1651350-1651446)
chr6 (3-97)||(27655484-27655579)
chr6 (3-97)||(25174225-25174319)
chr6 (3-158)||(25646227-25646390)
chr6 (3-98)||(33315979-33316075)
chr6 (3-97)||(16557413-16557507)
chr6 (3-97)||(16650643-16650737)
chr6 (3-98)||(1659111-1659207)
chr6 (3-98)||(4989566-4989662)
chr6 (17-97)||(29870887-29870967)
chr6 (3-97)||(23976239-23976334)
chr6 (3-98)||(15861397-15861491)
chr6 (3-99)||(11214806-11214903)
chr6 (3-99)||(16239031-16239129)
chr6 (206-273)||(17343788-17343855)
chr6 (3-95)||(18431304-18431397)
chr6 (206-261)||(35017186-35017241)
chr6 (5-98)||(16827278-16827371)
chr6 (5-97)||(1554509-1554600)
chr6 (209-261)||(22227148-22227200)
chr6 (49-161)||(13016232-13016351)
chr6 (3-79)||(18569274-18569350)
chr6 (3-95)||(32897394-32897487)
chr6 (3-97)||(31627107-31627202)
chr6 (3-96)||(16084086-16084180)
chr6 (3-96)||(16105228-16105322)
chr6 (5-97)||(18128954-18129046)
chr6 (5-97)||(19984607-19984698)
chr6 (3-97)||(18397595-18397690)
chr6 (8-97)||(23151929-23152018)
chr6 (206-256)||(25646339-25646389)
[»] chr5 (52 HSPs)
chr5 (3-273)||(7424169-7424437)
chr5 (3-273)||(18779513-18779781)
chr5 (3-273)||(17473289-17473558)
chr5 (3-273)||(1170061-1170329)
chr5 (49-273)||(24470796-24471017)
chr5 (3-268)||(23510486-23510751)
chr5 (50-273)||(25192563-25192785)
chr5 (164-273)||(11582406-11582515)
chr5 (3-97)||(9732185-9732279)
chr5 (3-97)||(25901844-25901938)
chr5 (3-97)||(27008678-27008772)
chr5 (3-97)||(19498466-19498560)
chr5 (3-97)||(21933678-21933772)
chr5 (3-97)||(21939848-21939942)
chr5 (3-97)||(23327619-23327713)
chr5 (3-97)||(35580920-35581014)
chr5 (3-97)||(37010682-37010776)
chr5 (3-159)||(11582478-11582635)
chr5 (3-199)||(21652802-21653003)
chr5 (3-95)||(24595169-24595261)
chr5 (3-161)||(28258195-28258361)
chr5 (3-97)||(21075006-21075101)
chr5 (3-97)||(11016-11110)
chr5 (3-97)||(11341302-11341396)
chr5 (3-97)||(22368001-22368096)
chr5 (3-97)||(22884700-22884795)
chr5 (3-97)||(25425288-25425382)
chr5 (3-98)||(110501-110597)
chr5 (3-97)||(43445271-43445366)
chr5 (3-97)||(29192137-29192230)
chr5 (3-162)||(21392782-21392949)
chr5 (3-98)||(10779696-10779792)
chr5 (3-97)||(1221248-1221343)
chr5 (3-97)||(4201484-4201578)
chr5 (3-97)||(23513462-23513557)
chr5 (3-97)||(21234924-21235018)
chr5 (3-97)||(20615278-20615372)
chr5 (3-97)||(20710803-20710898)
chr5 (3-97)||(37051650-37051744)
chr5 (107-162)||(28258137-28258192)
chr5 (181-256)||(28258142-28258217)
chr5 (199-261)||(11582475-11582537)
chr5 (3-99)||(24184613-24184710)
chr5 (202-254)||(21652910-21652962)
chr5 (5-99)||(35792654-35792748)
chr5 (5-96)||(27185236-27185327)
chr5 (5-97)||(16534972-16535064)
chr5 (5-97)||(21649496-21649588)
chr5 (107-157)||(11582423-11582473)
chr5 (206-256)||(28258199-28258249)
chr5 (56-99)||(3672655-3672699)
chr5 (54-97)||(5452269-5452313)
[»] chr4 (51 HSPs)
chr4 (3-273)||(15295519-15295787)
chr4 (3-273)||(18167282-18167551)
chr4 (3-273)||(53909170-53909439)
chr4 (3-273)||(10642675-10642945)
chr4 (3-203)||(15288409-15288607)
chr4 (5-273)||(9294013-9294280)
chr4 (3-261)||(13244970-13245210)
chr4 (3-199)||(44345381-44345585)
chr4 (125-261)||(13244913-13245047)
chr4 (125-273)||(53706327-53706473)
chr4 (3-97)||(13049563-13049657)
chr4 (3-97)||(15274159-15274253)
chr4 (3-97)||(14950683-14950777)
chr4 (3-97)||(26338149-26338243)
chr4 (3-163)||(33738855-33739023)
chr4 (164-273)||(7133971-7134080)
chr4 (5-97)||(22355965-22356057)
chr4 (3-97)||(19999191-19999286)
chr4 (3-97)||(47355989-47356084)
chr4 (3-157)||(54119661-54119823)
chr4 (165-272)||(54119789-54119897)
chr4 (3-95)||(18246855-18246947)
chr4 (3-97)||(26678708-26678802)
chr4 (3-97)||(10487334-10487428)
chr4 (3-97)||(16329323-16329417)
chr4 (7-99)||(14994858-14994951)
chr4 (5-157)||(7133851-7134006)
chr4 (3-146)||(45460357-45460509)
chr4 (162-246)||(13244870-13244955)
chr4 (3-97)||(53706190-53706285)
chr4 (201-261)||(7133951-7134011)
chr4 (222-273)||(15288569-15288620)
chr4 (3-97)||(44054585-44054680)
chr4 (3-95)||(12901172-12901265)
chr4 (5-97)||(34393717-34393809)
chr4 (3-97)||(13751694-13751789)
chr4 (3-97)||(21960968-21961063)
chr4 (5-97)||(8873896-8873988)
chr4 (52-146)||(30235942-30236045)
chr4 (5-99)||(16521450-16521544)
chr4 (206-256)||(44345423-44345473)
chr4 (5-97)||(110144-110236)
chr4 (48-97)||(15212005-15212054)
chr4 (5-97)||(25120524-25120616)
chr4 (49-97)||(5684349-5684397)
chr4 (218-273)||(16366315-16366369)
chr4 (111-157)||(13244918-13244964)
chr4 (206-256)||(15288513-15288563)
chr4 (222-256)||(53706325-53706359)
chr4 (124-199)||(53706288-53706359)
chr4 (163-203)||(54119845-54119885)
[»] chr1 (40 HSPs)
chr1 (3-273)||(21651342-21651610)
chr1 (3-273)||(22365244-22365512)
chr1 (3-273)||(41210535-41210803)
chr1 (3-273)||(18505847-18506114)
chr1 (5-273)||(9785642-9785907)
chr1 (5-273)||(21858045-21858311)
chr1 (5-260)||(22250362-22250615)
chr1 (3-97)||(18602451-18602545)
chr1 (3-97)||(20826629-20826723)
chr1 (138-273)||(20895264-20895398)
chr1 (1-97)||(7641996-7642092)
chr1 (3-99)||(45050344-45050440)
chr1 (3-199)||(20895098-20895283)
chr1 (3-97)||(17003487-17003581)
chr1 (3-97)||(22034511-22034605)
chr1 (3-97)||(41393114-41393208)
chr1 (3-97)||(5073708-5073802)
chr1 (3-97)||(18061015-18061109)
chr1 (3-99)||(22226641-22226738)
chr1 (3-162)||(49966239-49966406)
chr1 (17-97)||(22029359-22029439)
chr1 (4-98)||(15862839-15862933)
chr1 (3-97)||(51451275-51451369)
chr1 (3-151)||(2422377-2422533)
chr1 (3-97)||(17147444-17147539)
chr1 (3-97)||(22352790-22352885)
chr1 (3-97)||(22407601-22407696)
chr1 (50-161)||(2422531-2422649)
chr1 (3-99)||(35523826-35523923)
chr1 (5-99)||(21716866-21716961)
chr1 (3-45)||(20122065-20122107)
chr1 (5-97)||(5676009-5676101)
chr1 (5-97)||(35053505-35053597)
chr1 (5-96)||(37845874-37845965)
chr1 (5-97)||(20930136-20930228)
chr1 (5-97)||(41218116-41218208)
chr1 (49-97)||(20526781-20526829)
chr1 (214-256)||(20895201-20895243)
chr1 (5-97)||(44036308-44036400)
chr1 (54-97)||(27673515-27673559)
[»] chr2 (42 HSPs)
chr2 (3-273)||(461229-461497)
chr2 (49-273)||(9654275-9654497)
chr2 (3-271)||(24966782-24967056)
chr2 (3-210)||(20628793-20628999)
chr2 (3-97)||(12643424-12643518)
chr2 (3-97)||(17397994-17398088)
chr2 (3-97)||(11232650-11232744)
chr2 (3-97)||(12726717-12726811)
chr2 (3-97)||(22514497-22514591)
chr2 (3-97)||(23773201-23773295)
chr2 (3-97)||(24687066-24687160)
chr2 (3-97)||(28777098-28777192)
chr2 (3-97)||(34822862-34822956)
chr2 (3-97)||(5889694-5889789)
chr2 (3-97)||(19888177-19888271)
chr2 (3-188)||(36892110-36892300)
chr2 (3-98)||(21275924-21276020)
chr2 (3-97)||(8942310-8942405)
chr2 (3-95)||(3800510-3800603)
chr2 (3-99)||(24827967-24828064)
chr2 (17-97)||(12637577-12637657)
chr2 (3-98)||(21140540-21140636)
chr2 (3-97)||(14907837-14907931)
chr2 (3-97)||(20013786-20013880)
chr2 (3-97)||(23818843-23818937)
chr2 (5-97)||(15632061-15632153)
chr2 (24-99)||(22692952-22693028)
chr2 (24-99)||(22697599-22697675)
chr2 (105-199)||(25877478-25877569)
chr2 (3-99)||(269849-269946)
chr2 (218-261)||(20628950-20628993)
chr2 (3-97)||(22691351-22691446)
chr2 (3-97)||(22695998-22696093)
chr2 (206-256)||(20628898-20628948)
chr2 (3-99)||(4449630-4449727)
chr2 (3-96)||(25600626-25600720)
chr2 (5-97)||(22273550-22273642)
chr2 (5-95)||(22862154-22862244)
chr2 (49-97)||(22282783-22282831)
chr2 (123-162)||(25877535-25877574)
chr2 (54-97)||(721134-721178)
chr2 (42-97)||(22581374-22581430)
[»] chr8 (56 HSPs)
chr8 (3-273)||(24718816-24719085)
chr8 (3-273)||(22007877-22008147)
chr8 (3-273)||(13664034-13664304)
chr8 (3-273)||(13723309-13723579)
chr8 (3-203)||(43374980-43375179)
chr8 (51-273)||(24108032-24108253)
chr8 (5-260)||(22908885-22909139)
chr8 (3-151)||(6775630-6775779)
chr8 (3-97)||(16675724-16675818)
chr8 (3-97)||(21845889-21845983)
chr8 (3-99)||(24547883-24547979)
chr8 (3-97)||(272601-272695)
chr8 (3-97)||(643154-643248)
chr8 (3-97)||(828960-829054)
chr8 (3-97)||(21853294-21853388)
chr8 (3-97)||(22089841-22089935)
chr8 (3-97)||(3432974-3433068)
chr8 (3-97)||(15320457-15320551)
chr8 (3-97)||(15500826-15500920)
chr8 (3-97)||(224560-224655)
chr8 (3-97)||(700973-701068)
chr8 (3-97)||(738183-738278)
chr8 (3-97)||(862078-862173)
chr8 (5-161)||(20480267-20480429)
chr8 (3-188)||(25121111-25121302)
chr8 (3-161)||(16416854-16417020)
chr8 (3-161)||(22322834-22323000)
chr8 (3-97)||(5236859-5236953)
chr8 (3-97)||(16874336-16874431)
chr8 (3-97)||(24662645-24662739)
chr8 (3-97)||(43684318-43684412)
chr8 (3-144)||(19994551-19994700)
chr8 (162-256)||(20480214-20480308)
chr8 (3-106)||(41245319-41245423)
chr8 (218-273)||(43375137-43375192)
chr8 (5-93)||(24930516-24930605)
chr8 (3-97)||(20655423-20655518)
chr8 (3-96)||(20648838-20648932)
chr8 (3-162)||(20568666-20568836)
chr8 (3-162)||(20574859-20575029)
chr8 (5-97)||(37605658-37605750)
chr8 (5-97)||(37610032-37610124)
chr8 (107-161)||(20480210-20480264)
chr8 (5-97)||(270402-270494)
chr8 (5-97)||(645426-645518)
chr8 (5-97)||(831161-831253)
chr8 (5-97)||(16203739-16203831)
chr8 (5-97)||(24387110-24387202)
chr8 (107-162)||(22323003-22323058)
chr8 (206-256)||(20480271-20480321)
chr8 (206-256)||(43375085-43375135)
chr8 (42-97)||(28543601-28543656)
chr8 (206-256)||(16416858-16416908)
chr8 (206-256)||(25121140-25121190)
chr8 (206-250)||(6775735-6775779)
chr8 (49-97)||(29758957-29759005)
[»] chr3 (68 HSPs)
chr3 (3-273)||(15860546-15860816)
chr3 (3-273)||(19572171-19572438)
chr3 (5-273)||(25057336-25057603)
chr3 (3-194)||(13816082-13816271)
chr3 (5-273)||(17957737-17958004)
chr3 (164-273)||(11813395-11813504)
chr3 (3-97)||(18909354-18909448)
chr3 (3-97)||(53769323-53769417)
chr3 (3-97)||(55315058-55315152)
chr3 (3-99)||(15574704-15574800)
chr3 (3-97)||(1469051-1469145)
chr3 (3-97)||(8269800-8269894)
chr3 (3-97)||(8276911-8277005)
chr3 (3-97)||(8305720-8305814)
chr3 (3-97)||(30151999-30152093)
chr3 (3-97)||(45859682-45859776)
chr3 (6-99)||(15613723-15613816)
chr3 (3-97)||(27839370-27839465)
chr3 (3-98)||(44228090-44228185)
chr3 (3-97)||(2450725-2450819)
chr3 (3-97)||(16819573-16819667)
chr3 (3-97)||(22273709-22273803)
chr3 (3-97)||(41268904-41268998)
chr3 (3-161)||(30205045-30205212)
chr3 (181-260)||(30141463-30141542)
chr3 (3-97)||(49230877-49230972)
chr3 (3-95)||(13977032-13977126)
chr3 (3-97)||(13956200-13956296)
chr3 (3-99)||(14846060-14846157)
chr3 (3-146)||(17099321-17099472)
chr3 (3-98)||(12265889-12265985)
chr3 (49-156)||(11813470-11813577)
chr3 (3-161)||(16183410-16183580)
chr3 (3-99)||(15469866-15469961)
chr3 (3-97)||(16745569-16745663)
chr3 (3-99)||(18905197-18905293)
chr3 (3-97)||(15939859-15939954)
chr3 (3-162)||(22145673-22145838)
chr3 (18-97)||(50113543-50113622)
chr3 (3-99)||(14297159-14297256)
chr3 (3-99)||(14302786-14302883)
chr3 (3-99)||(35122348-35122445)
chr3 (3-73)||(6148241-6148312)
chr3 (5-99)||(16259703-16259797)
chr3 (3-97)||(17523809-17523904)
chr3 (5-95)||(19230726-19230816)
chr3 (5-97)||(2048724-2048816)
chr3 (5-97)||(7852472-7852564)
chr3 (3-99)||(53899921-53900018)
chr3 (206-261)||(11813464-11813519)
chr3 (107-157)||(11813412-11813462)
chr3 (107-157)||(30141467-30141517)
chr3 (5-97)||(5227379-5227471)
chr3 (105-162)||(6148317-6148374)
chr3 (5-97)||(19945290-19945382)
chr3 (5-97)||(33340507-33340599)
chr3 (5-97)||(51159880-51159972)
chr3 (49-97)||(10737220-10737268)
chr3 (3-97)||(17138129-17138225)
chr3 (49-96)||(47786318-47786365)
chr3 (206-252)||(13816120-13816166)
chr3 (48-188)||(40938295-40938443)
chr3 (5-97)||(319016-319108)
chr3 (5-97)||(23491170-23491262)
chr3 (162-203)||(30141463-30141504)
chr3 (54-97)||(11883719-11883763)
chr3 (54-97)||(12951715-12951759)
chr3 (42-97)||(14522747-14522803)
[»] scaffold0162 (1 HSPs)
scaffold0162 (3-273)||(27912-28180)
[»] scaffold0251 (1 HSPs)
scaffold0251 (3-273)||(15263-15539)
[»] scaffold0218 (1 HSPs)
scaffold0218 (3-269)||(6549-6813)
[»] scaffold2147 (1 HSPs)
scaffold2147 (49-273)||(794-1015)
[»] scaffold0039 (1 HSPs)
scaffold0039 (49-273)||(20692-20914)
[»] scaffold0106 (1 HSPs)
scaffold0106 (5-269)||(40094-40356)
[»] scaffold0234 (1 HSPs)
scaffold0234 (5-273)||(18981-19238)
[»] scaffold0184 (2 HSPs)
scaffold0184 (5-260)||(33855-34109)
scaffold0184 (5-97)||(32595-32687)
[»] scaffold0078 (2 HSPs)
scaffold0078 (5-260)||(38735-38989)
scaffold0078 (5-97)||(40157-40249)
[»] scaffold0315 (1 HSPs)
scaffold0315 (5-260)||(17151-17405)
[»] scaffold0028 (4 HSPs)
scaffold0028 (107-273)||(90444-90608)
scaffold0028 (3-98)||(129050-129146)
scaffold0028 (164-256)||(90402-90494)
scaffold0028 (3-154)||(90285-90434)
[»] scaffold0011 (14 HSPs)
scaffold0011 (3-199)||(124691-124886)
scaffold0011 (3-198)||(193181-193374)
scaffold0011 (3-198)||(76092-76285)
scaffold0011 (125-273)||(124854-125001)
scaffold0011 (3-162)||(256309-256476)
scaffold0011 (125-273)||(193065-193212)
scaffold0011 (125-273)||(76254-76401)
scaffold0011 (206-252)||(124796-124842)
scaffold0011 (222-255)||(76252-76285)
scaffold0011 (222-255)||(193181-193214)
scaffold0011 (3-62)||(262915-262975)
scaffold0011 (222-256)||(124852-124886)
scaffold0011 (206-256)||(256421-256471)
scaffold0011 (211-252)||(193224-193265)
[»] scaffold0034 (5 HSPs)
scaffold0034 (107-273)||(77986-78150)
scaffold0034 (3-155)||(78159-78312)
scaffold0034 (164-256)||(78100-78192)
scaffold0034 (5-97)||(38876-38969)
scaffold0034 (206-261)||(78152-78207)
[»] scaffold0407 (4 HSPs)
scaffold0407 (3-199)||(6009-6203)
scaffold0407 (125-273)||(6171-6318)
scaffold0407 (206-256)||(6113-6163)
scaffold0407 (222-256)||(6169-6203)
[»] scaffold1140 (6 HSPs)
scaffold1140 (3-198)||(1751-1944)
scaffold1140 (120-273)||(1595-1747)
scaffold1140 (218-255)||(1711-1748)
scaffold1140 (125-198)||(1711-1782)
scaffold1140 (222-255)||(1751-1784)
scaffold1140 (211-252)||(1794-1835)
[»] scaffold0116 (6 HSPs)
scaffold0116 (125-273)||(28319-28466)
scaffold0116 (3-97)||(28550-28645)
scaffold0116 (123-199)||(28434-28508)
scaffold0116 (222-256)||(28434-28468)
scaffold0116 (124-199)||(28474-28547)
scaffold0116 (224-256)||(28514-28546)
[»] scaffold0138 (6 HSPs)
scaffold0138 (3-198)||(14664-14858)
scaffold0138 (120-273)||(14862-15014)
scaffold0138 (218-256)||(14861-14899)
scaffold0138 (125-199)||(14827-14899)
scaffold0138 (206-252)||(14769-14815)
scaffold0138 (222-255)||(14825-14858)
[»] scaffold0044 (6 HSPs)
scaffold0044 (3-199)||(94879-95081)
scaffold0044 (3-97)||(66840-66934)
scaffold0044 (120-162)||(94874-94916)
scaffold0044 (206-256)||(94919-94969)
scaffold0044 (123-162)||(94794-94833)
scaffold0044 (224-256)||(94799-94831)
[»] scaffold0480 (3 HSPs)
scaffold0480 (3-199)||(6762-6964)
scaffold0480 (206-256)||(6874-6924)
scaffold0480 (120-161)||(6927-6968)
[»] scaffold0049 (3 HSPs)
scaffold0049 (171-273)||(31082-31184)
scaffold0049 (107-157)||(31099-31149)
scaffold0049 (162-204)||(31094-31136)
[»] scaffold0021 (8 HSPs)
scaffold0021 (3-162)||(87035-87202)
scaffold0021 (23-162)||(76977-77124)
scaffold0021 (3-97)||(138212-138306)
scaffold0021 (206-256)||(76982-77032)
scaffold0021 (206-256)||(87040-87090)
scaffold0021 (123-162)||(76897-76936)
scaffold0021 (42-97)||(10329-10385)
scaffold0021 (224-256)||(76902-76934)
[»] scaffold0269 (3 HSPs)
scaffold0269 (181-273)||(3510-3602)
scaffold0269 (107-157)||(3527-3577)
scaffold0269 (162-204)||(3522-3564)
[»] scaffold0023 (3 HSPs)
scaffold0023 (3-98)||(34998-35093)
scaffold0023 (3-95)||(844-936)
scaffold0023 (3-99)||(155754-155851)
[»] scaffold0215 (1 HSPs)
scaffold0215 (3-97)||(17491-17585)
[»] scaffold0124 (2 HSPs)
scaffold0124 (3-97)||(2975-3069)
scaffold0124 (5-96)||(23102-23194)
[»] scaffold0107 (1 HSPs)
scaffold0107 (3-97)||(30017-30111)
[»] scaffold0076 (1 HSPs)
scaffold0076 (3-97)||(37953-38047)
[»] scaffold0037 (4 HSPs)
scaffold0037 (3-162)||(26125-26292)
scaffold0037 (6-96)||(70801-70892)
scaffold0037 (123-162)||(26333-26372)
scaffold0037 (224-256)||(26335-26367)
[»] scaffold0692 (2 HSPs)
scaffold0692 (3-198)||(796-996)
scaffold0692 (202-256)||(904-958)
[»] scaffold0003 (1 HSPs)
scaffold0003 (3-97)||(5846-5940)
[»] scaffold0673 (1 HSPs)
scaffold0673 (3-162)||(2242-2409)
[»] scaffold0396 (2 HSPs)
scaffold0396 (3-99)||(16106-16203)
scaffold0396 (5-97)||(13598-13690)
[»] scaffold0761 (1 HSPs)
scaffold0761 (3-97)||(3092-3187)
[»] scaffold0359 (1 HSPs)
scaffold0359 (3-163)||(13142-13310)
[»] scaffold1404 (1 HSPs)
scaffold1404 (3-99)||(218-315)
[»] scaffold0302 (1 HSPs)
scaffold0302 (3-99)||(4504-4601)
[»] scaffold0225 (2 HSPs)
scaffold0225 (3-99)||(14961-15058)
scaffold0225 (58-99)||(28482-28523)
[»] scaffold0022 (2 HSPs)
scaffold0022 (3-99)||(6549-6646)
scaffold0022 (54-97)||(108315-108359)
[»] scaffold0141 (2 HSPs)
scaffold0141 (3-97)||(25567-25661)
scaffold0141 (3-97)||(21312-21406)
[»] scaffold0413 (1 HSPs)
scaffold0413 (3-99)||(9326-9423)
[»] scaffold0032 (2 HSPs)
scaffold0032 (3-99)||(109482-109579)
scaffold0032 (5-97)||(54303-54395)
[»] scaffold0213 (2 HSPs)
scaffold0213 (5-157)||(27625-27779)
scaffold0213 (201-256)||(27625-27680)
[»] scaffold0292 (3 HSPs)
scaffold0292 (105-199)||(18240-18332)
scaffold0292 (120-163)||(18234-18277)
scaffold0292 (206-256)||(18280-18330)
[»] scaffold0026 (1 HSPs)
scaffold0026 (3-99)||(106663-106760)
[»] scaffold0772 (1 HSPs)
scaffold0772 (3-65)||(4469-4531)
[»] scaffold0395 (1 HSPs)
scaffold0395 (3-96)||(14345-14439)
[»] scaffold0120 (1 HSPs)
scaffold0120 (3-96)||(27241-27335)
[»] scaffold0104 (1 HSPs)
scaffold0104 (3-99)||(51693-51790)
[»] scaffold1560 (1 HSPs)
scaffold1560 (3-99)||(1186-1289)
[»] scaffold0103 (1 HSPs)
scaffold0103 (3-163)||(32173-32343)
[»] scaffold0240 (1 HSPs)
scaffold0240 (3-97)||(6212-6307)
[»] scaffold0001 (1 HSPs)
scaffold0001 (3-103)||(71853-71954)
[»] scaffold0031 (2 HSPs)
scaffold0031 (3-96)||(69432-69526)
scaffold0031 (42-163)||(30667-30796)
[»] scaffold0447 (1 HSPs)
scaffold0447 (5-97)||(3291-3383)
[»] scaffold0383 (2 HSPs)
scaffold0383 (5-97)||(5899-5991)
scaffold0383 (5-98)||(1029-1122)
[»] scaffold0008 (3 HSPs)
scaffold0008 (3-146)||(21268-21419)
scaffold0008 (105-146)||(28857-28898)
scaffold0008 (5-97)||(129603-129695)
[»] scaffold0622 (1 HSPs)
scaffold0622 (3-97)||(8098-8193)
[»] scaffold0190 (1 HSPs)
scaffold0190 (3-96)||(8745-8839)
[»] scaffold0171 (1 HSPs)
scaffold0171 (228-273)||(31296-31341)
[»] scaffold0083 (1 HSPs)
scaffold0083 (5-97)||(12864-12956)
[»] scaffold0009 (2 HSPs)
scaffold0009 (5-97)||(236847-236939)
scaffold0009 (5-97)||(270786-270878)
[»] scaffold0338 (1 HSPs)
scaffold0338 (3-96)||(7459-7553)
[»] scaffold0195 (2 HSPs)
scaffold0195 (5-97)||(20057-20149)
scaffold0195 (5-96)||(17974-18065)
[»] scaffold0025 (2 HSPs)
scaffold0025 (5-97)||(145196-145288)
scaffold0025 (5-97)||(147455-147547)
[»] scaffold0183 (1 HSPs)
scaffold0183 (17-57)||(5700-5740)
[»] scaffold0462 (1 HSPs)
scaffold0462 (3-97)||(4795-4890)
[»] scaffold0750 (1 HSPs)
scaffold0750 (3-96)||(6737-6831)
[»] scaffold0342 (1 HSPs)
scaffold0342 (3-99)||(4505-4602)
[»] scaffold0132 (1 HSPs)
scaffold0132 (5-97)||(41372-41464)
[»] scaffold0018 (2 HSPs)
scaffold0018 (5-97)||(52678-52770)
scaffold0018 (5-97)||(56630-56722)
[»] scaffold1753 (1 HSPs)
scaffold1753 (49-97)||(127-175)
[»] scaffold0498 (1 HSPs)
scaffold0498 (7-97)||(7646-7736)
[»] scaffold0014 (1 HSPs)
scaffold0014 (47-163)||(145518-145644)
[»] scaffold0068 (1 HSPs)
scaffold0068 (12-93)||(60244-60325)
[»] scaffold0467 (1 HSPs)
scaffold0467 (5-97)||(11439-11531)
[»] scaffold0465 (1 HSPs)
scaffold0465 (5-97)||(11329-11421)
[»] scaffold0150 (2 HSPs)
scaffold0150 (54-97)||(20363-20407)
scaffold0150 (54-97)||(27192-27236)


Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 18981309 - 18981577
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatg 102  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18981309 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagatg 18981408  T
Q  103 aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgga 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||| ||||||||||||    
T  18981409 aaatgatgttttattcattattgggctccggcctagcagagatcttttgggatctagttt--tagggcttcggcctggcagagatcttttgagatctgga 18981506  T
Q  203 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18981507 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 18981577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 3 - 273
Target Start/End: Complemental strand, 15926129 - 15925860
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15926129 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagat 15926030  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||| |||||||||||    
T  15926029 gaaatgatgttttattcattattgggctccgtcctagcagagatcttttgggatctagttt--tagggcttcggcctggcagagatcttttgagatctgg 15925932  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15925931 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 15925860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 16480338 - 16480596
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatg 102  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16480338 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagatg 16480437  T
Q  103 aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgga 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||          ||||||||||    
T  16480438 aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt--tagggcttcggcctggca----------gagatctgga 16480525  T
Q  203 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16480526 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 16480596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 3 - 273
Target Start/End: Complemental strand, 36051426 - 36051157
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||| ||||||||||||||| | || |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36051426 atcaatataattgggtgtcgtcctatatattgaggtagaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagat 36051327  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||| |||  ||||||||| |||||||||||    
T  36051326 gaaatgatgttttattcattattgggctccggcctagcagcgatcttttgagatctag--ttatagggcttcgacctgacagagatcttttgagatctgg 36051229  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36051228 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 36051157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 2192101 - 2192366
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2192101 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgctgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagatga 2192199  T
Q  104 aatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggat 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |||||| ||| ||||||||| |||||||||||||    
T  2192200 aatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatctggat 2192296  T
Q  204 acgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2192297 acgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 2192366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 3 - 273
Target Start/End: Complemental strand, 16210542 - 16210273
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||  |||| ||||||||||||||| |||| |||| | |||||||| ||||||||||||||||| |||||||||||||||||||||||| |    
T  16210542 atcaatataattaggtgtcgtcctatatattgaggttgaaattgtggattgttgttgcattatcgagtccttatacatgtccatgcatcatagtcgagtt 16210443  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    || |||||| |||||||||||||||||| |||||| |||||||||||||||| |||||||  |||||||||||||||  ||||||||| |||||||||||    
T  16210442 gagatgatgatttattcattattgggcttcggcctggcagagatcttttgaggtctagtt--atagggcttcggcctggcagagatcttttgagatctgg 16210345  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  16210344 atacgatgttttattcattatagggcttcggcatggcatagatcttttgagatctggatttgggtgacgacc 16210273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 260
Target Start/End: Complemental strand, 7291612 - 7291358
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||||||  |||||||||||||||||||||| | |||    
T  7291612 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgttga 7291514  T
Q  104 aat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
     ||  |||||||||||| |||| ||||| |||||| ||||||||||||||||||||||||||   || |||||| ||| ||||||||| |||||||||||    
T  7291513 gatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatctgg 7291417  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7291416 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 7291358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 189
Target Start/End: Original strand, 11582243 - 11582428
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    |||||||||||||||||| ||||||||||||||| |||| |||| | ||||||||| |||||||||||| ||| |||||||||||||||||||||||| |    
T  11582243 atcaatataattgagtgtcgtcctatatattgaggttgaaattgtggattgttgtcacattatcgagtctttatacatgtccatgcatcatagtcgagtt 11582342  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatct 189  Q
    || |||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||  ||||||||    
T  11582343 gagatgatgatttattcattattgggcttcggcctagcagagatcttttgaggtctagttt--tagggcttcggcctagaagagatct 11582428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 125 - 273
Target Start/End: Original strand, 13038670 - 13038817
Alignment:
Q  125 gggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttatt-cgttata 223  Q
    ||||| ||| || ||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||||||||||||||||||||| ||| |||||||    
T  13038670 gggcttcggtcttgcagagatcttttgagatctagtt--atagggcttcggcctagcagagatcttttgagatctggatacgatgtttgatttcgttata 13038767  T
Q  224 gggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13038768 gggcttcggcctggcagagatcttttgagatctggatatgagtgacgacc 13038817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 13038507 - 13038702
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||| | |||| ||||||||||||||| |||| |||| | |||||||||||||||| |||||| || |||||| || |||||||||||||| |    
T  13038507 atcaatataatcgggtgtcgtcctatatattgaggttgaaattgtggattgttgtcgcattattgagtccctatacatgttcaagcatcatagtcgagtt 13038606  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    || |||||| || ||||||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||| ||  ||||||||| |||||||||    
T  13038607 gagatgatgattaattcattattgggcttcggcctagcatagatcttttgagatctagttt--tagggcttcggtcttgcagagatcttttgagatct 13038702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 10988373 - 10988279
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10988373 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 10988279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 11514883 - 11514789
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11514883 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 11514789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 25293680 - 25293774
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25293680 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 25293774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 30263526 - 30263620
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30263526 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 30263620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 42057565 - 42057659
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42057565 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 42057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 12545115 - 12545306
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| ||||||||||||||||| || ||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||||||| | |    
T  12545115 atcaatataattgggtgttgtcctatatatttaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 12545214  T
Q  102 gaaat-------gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatc 188  Q
    || ||       ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||  | ||||||||||||  ||||||||    
T  12545215 gagattttatgcgatgttttattcattattgggctccggccttacagagatcttttgagatctagttt--ttgggcttcggccttgcagagatc 12545306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 15823813 - 15824004
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttga-gattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||| ||||||||| ||| |||||  ||||||||||||||||||||||| ||  |||||||||||||||||||||| | |    
T  15823813 atcaatataattgggtgttgtcctttatattgaggtgaagattgttaattgttgtcgcattatcgagtctttgtacatgtccatgcatcatagtcgtgtt 15823912  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatc 188  Q
    |       | |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |  |||||||||||  ||||||||    
T  15823913 gagattttatatgatgttttattcattattgggctccggcctagcagagatcatttgtgatctagtttttt--ggcttcggccttgcagagatc 15824004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 26010593 - 26010688
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26010593 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 26010688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 7821685 - 7821591
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7821685 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 7821591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 7828996 - 7828902
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7828996 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 7828902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 13912515 - 13912609
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  13912515 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattatacatgtccatgcatcatagtcg 13912609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 27102949 - 27103043
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27102949 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 27103043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 27110297 - 27110391
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27110297 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 27110391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 27175377 - 27175283
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27175377 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 27175283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 38785041 - 38785135
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38785041 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 38785135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 13867477 - 13867644
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| ||||||| |||||||||||  ||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||||||| | |    
T  13867477 atcaatataattgggtgttgttctatatattgaagtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 13867576  T
Q  102 gaaat-------gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    || ||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13867577 gagattttatatgatgttttattcattattgggctccggccttgcagagatcttttgagatctagttt 13867644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 16417228 - 16417134
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16417228 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagttcttacacatgtccatgcatcatagtcg 16417134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 2436386 - 2436290
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2436386 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 2436290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 47288536 - 47288345
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc----- 96  Q
    ||||||||||||| |||||||||||||| ||||| ||| | ||| | |||||||| ||||||||||||||||  |||||||||||||||||||||         
T  47288536 atcaatataattgggtgttgtcctatattttgaggtgaaaattgtggattgttgttgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 47288437  T
Q  97 --gagatgaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatc 188  Q
      ||| | | |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||  | ||||||||||||  ||||||||    
T  47288436 gagagtttatatgatgttttattcattattgggctccggcctagcagagataatttgtgatctagttt--ttgggcttcggccttgcagagatc 47288345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 162 - 273
Target Start/End: Original strand, 11582431 - 11582543
Alignment:
Q  162 ttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttatt-cgttatagggcttcggcctggcagagatcttttgagatctggat 260  Q
    |||||||||||||||||  || |||||| ||||||||| |||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  11582431 ttatagggcttcggcctggcatagatcttttgagatctagatacgatgtttgatttcgttatagggtttcggcctagcagagatcttttgagatctggat 11582530  T
Q  261 atgggtgacgacc 273  Q
    |||||||||||||    
T  11582531 atgggtgacgacc 11582543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 15525886 - 15525982
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  15525886 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaatcgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 15525982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 142386 - 142221
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc------- 96  Q
    ||||||||||| |||||||||||||||||| | ||| | ||| | |||||||||||||||||||||||||  ||||||||||||||||||| |           
T  142386 caatataattgggtgttgtcctatatattgtggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagccgtgttga 142287  T
Q  97 gagatgaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    ||| | | |||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||    
T  142286 gagtttatatgatgttttattcattattgggctccggccttgcagagatcatttgtgatctagttt 142221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 44864004 - 44863840
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||  | |||||||||||||||||||| | |    
T  44864004 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtatatgtccatgcatcatagtcgtgtt 44863905  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctag 159  Q
    |       | ||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||    
T  44863904 gagattttatatgatgttttattcattattgggctccggtctagcatagatcatttgtgatctag 44863840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 18255224 - 18255319
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18255224 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 18255319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 13757341 - 13757246
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13757341 atcaatataattgggtgtcgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 13757246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 15442961 - 15443055
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15442961 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 15443055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 15952496 - 15952591
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  15952496 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagttcttatacatgtccatgcatcatagtcg 15952591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 13571592 - 13571525
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtc 70  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13571592 atcaatataattgggtgttgtcttatatattgagttgagattgagaattgttgtcgcattatcgagtc 13571525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 18305315 - 18305372
Alignment:
Q  105 atgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18305315 atgatgttttattcattattgggctccggccttgcagagatcttttgagatctagttt 18305372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 26071668 - 26071763
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| | || ||||||||||||||| ||| | ||| | |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  26071668 atcaatataattgggcgtggtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcg 26071763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 26095455 - 26095550
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| | || ||||||||||||||| ||| | ||| | |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  26095455 atcaatataattgggcgtggtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcg 26095550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 369646 - 369552
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||| |||||||||||||||||| |  || | ||| | |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  369646 caatataattgggtgttgtcctatatattgtggagaaaattgtggattgttgtcgcattatcgagtctttatacatgtccatgcatcatagtcga 369552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 15761775 - 15761866
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || |||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  15761775 caatataattgggtgttgtcctatatattgtggagaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 15761866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 1938176 - 1938266
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||| |||||||||||||||||| |  || | |  |||||||||||||||||||||||| |   |||||||||||||||||||||    
T  1938176 caatataattgggtgttgtcctatatattgtggagaaaatt-gaattgttgtcgcattatcgagtcttattacatgtccatgcatcatagtc 1938266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 12753624 - 12753549
Alignment:
Q  21 tgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    |||||| ||||||| | ||| |||| |||||||||||||||||||||||| |   |||||||||||||||||||||    
T  12753624 tgtcctttatattgtggtgaaattgtgaattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 12753549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 32495960 - 32496052
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  32495960 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 32496052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 11582430 - 11582473
Alignment:
Q  218 gttatagggcttcggcctggcagagatcttttgagatctggata 261  Q
    |||||||||||||||||||||| |||||||||||||||| ||||    
T  11582430 gttatagggcttcggcctggcatagatcttttgagatctagata 11582473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 13867589 - 13867639
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  13867589 gatgttttattcattattgggctccggccttgcagagatcttttgagatct 13867639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 18305317 - 18305367
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  18305317 gatgttttattcattattgggctccggccttgcagagatcttttgagatct 18305367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 45453676 - 45453754
Alignment:
Q  19 gttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    |||||||||||||||| | ||| | ||| | |||||||||||||||||||||| |   |||||||||||||||||||||    
T  45453676 gttgtcctatatattgtggtgaaaattgtggattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 45453754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 125585 - 125493
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||| ||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  125585 caatataattgggtgtcgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 125493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 3058806 - 3058714
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| || ||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  3058806 caatataattgggtattgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 3058714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 3893854 - 3893762
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||| || |||||||| ||||||||| | ||| | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  3893854 caatataaatgggtgttgtcatatatattgtggtgaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 3893762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 2027316 - 2027223
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga--ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || |  ||| || ||||||||||||||||||||| |   ||||||||| ||||||||||||    
T  2027316 caatataattgggtgttgtcctatatattgtggagaaaatttgtga-ttgttgtcgcattatcgagtcttgttacatgtccacgcatcatagtcg 2027223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 11285925 - 11285878
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    |||||||||||||||||||||| |   |||||||||||||||||||||    
T  11285925 attgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 11285878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 12545226 - 12545277
Alignment:
Q  205 cgatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    ||||||||||||| |||| ||||| ||||||  |||||||||||||||||||    
T  12545226 cgatgttttattcattattgggctccggccttacagagatcttttgagatct 12545277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 11582348 - 11582394
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgag 252  Q
    |||| ||||||| |||| |||||||||||| ||||||||||||||||    
T  11582348 gatgatttattcattattgggcttcggcctagcagagatcttttgag 11582394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 12249556 - 12249610
Alignment:
Q  42 attgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    |||| |||||| ||||||||||||||||| |   |||||||||||||||||||||    
T  12249556 attgtgaattgatgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 12249610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 112702 - 112794
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| ||| |||||||||||||| |  || | ||| || ||||||||||||||||||||| |   |||||| |||||||||||||||    
T  112702 caatataattgggtgatgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgttcatgcatcatagtcg 112794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 157
Target Start/End: Original strand, 13038705 - 13038742
Alignment:
Q  120 ttattgggctccggcctagcagagatcttttgagatct 157  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  13038705 ttatagggcttcggcctagcagagatcttttgagatct 13038742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 273
Target Start/End: Complemental strand, 19609261 - 19608993
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatg 102  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  19609261 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtcgatgcatcatagtcgagatg 19609162  T
Q  103 aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgga 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||| ||||||||||||    
T  19609161 aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt--tagggcttcggcctggcagagatcttttgagatctgga 19609064  T
Q  203 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  19609063 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatttggatttgggtgacgacc 19608993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 18088111 - 18088380
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  18088111 atcaatataattgggtgtcgtcctatatattgaggttgagattgtgaattgttgttgcattatcgagtccttatacatgtccatgcatcatagtcgagat 18088210  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||| |||||||||||    
T  18088211 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgggatctagttt--tagggcttcggcctggcagagatcttttgagatctgg 18088308  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18088309 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 18088380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 49 - 273
Target Start/End: Complemental strand, 18741167 - 18740945
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaaatgatgttttattcattattgggctccggcctagcagagatctt 148  Q
    |||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18741167 attgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgagatgaaatgatgttttattcattattgggctccggcctagcagagatctt 18741068  T
Q  149 ttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttt 248  Q
    ||||  ||||||||  ||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  18741067 ttgacgtctagttt--tagggcttcggcctggcagagatcttttgagatctggatacgatgttttattcgttatagggcttcggcctttcagagatcttt 18740970  T
Q  249 tgagatctggatatgggtgacgacc 273  Q
    |||||||||||| ||||||||||||    
T  18740969 tgagatctggatttgggtgacgacc 18740945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 18004373 - 18004643
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| || | |||| | |||||||||||||||||||||||||  |||||||||||||||||||||| | |    
T  18004373 atcaatataattgggtgttgtcctatatattgaggtggaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 18004472  T
Q  102 gaaat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    || ||  |||||||||||| | || ||||| |||||| ||||||||||||||||||||||||||   || |||||| ||| ||||||||| |||||||||    
T  18004473 gagatacgatgttttattcgtcatagggcttcggcctggcagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatct 18004569  T
Q  200 ggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18004570 ggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 18004643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 50 - 273
Target Start/End: Original strand, 18843267 - 18843489
Alignment:
Q  50 ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaaat--gatgttttattcattattgggctccggcctagcagagatct 147  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||||| | ||| ||  |||||||||||| |||| ||||| |||||| ||||||||||    
T  18843267 ttgtcgtcgcattatcgagttcttatacatgtccatgcatcatagtcgtgttgagatacgatgttttattcgttatagggcttcggcctggcagagatct 18843366  T
Q  148 tttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatctt 247  Q
    ||||||||||||||||   || |||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18843367 tttgagatctagtttt---ggacttcggtctggcagagatcttttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatctt 18843463  T
Q  248 ttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||    
T  18843464 ttgagatctggatatgggtgacgacc 18843489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 50 - 273
Target Start/End: Original strand, 18825206 - 18825428
Alignment:
Q  50 ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaaat--gatgttttattcattattgggctccggcctagcagagatct 147  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| | | ||| ||  |||||||||||| |||| ||||| ||||||  |||||||||    
T  18825206 ttgttgtcgcattatcgagttcttatacatgtccatgcatcatagttgtgttgagatacgatgttttattcgttatagggcttcggcctgacagagatct 18825305  T
Q  148 tttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatctt 247  Q
    ||||||||||||||||   || |||||| ||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18825306 tttgagatctagtttt---ggacttcggtctagcagagatcttttgagatctggatacgatattttattcgttatagggcttcggcctggcagagatctt 18825402  T
Q  248 ttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||    
T  18825403 ttgagatctggatatgggtgacgacc 18825428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 13622514 - 13622790
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc----- 96  Q
    ||||||||||||| | |||||||||||||||||| |||| |||| | ||||| || |||||||||||||| |  |||||| ||||||||||||||         
T  13622514 atcaatataattgggagttgtcctatatattgaggttgaaattgtggattgtggttgcattatcgagtccgtgtacatgttcatgcatcatagtcatgtt 13622613  T
Q  97 gagatg--aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttga 194  Q
    |||||   | ||||||||||||||||  ||||| | ||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||||| ||||    
T  13622614 gagattttatatgatgttttattcatatttgggtttcggcctagcagagatcttttgagatctagtttta--gggcttcggcctggcagagatcttttga 13622711  T
Q  195 gatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    | ||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  13622712 ggtctggatacaatgttttattcgttatagggcttcggcctggaagagatctattgagatctggatttgggtgacgacc 13622790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 15736583 - 15736844
Alignment:
Q  5 caatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||||||||||||||||||| |||| |||| | ||||| ||||||||||||||||| |  |||||||||||||| ||||| | | |||    
T  15736583 caatataattgggtgttgtcctatatattgaggttgaaattgtggattgtggtcgcattatcgagtccgtgtacatgtccatgcataatagttgtgttga 15736682  T
Q  104 aat-------gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgaga 196  Q
     ||       ||||||||||||||  ||||||| |||||| |||||||||||||||||||||||||||  ||||||||| ||  ||||||||| |||||     
T  15736683 gattttatatgatgttttattcatatttgggcttcggcctggcagagatcttttgagatctagtttta--gggcttcggtctggcagagatcttttgagg 15736780  T
Q  197 tctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 260  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15736781 tctgggtacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 15736844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 17343683 - 17343838
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  17343683 atcaatataattgggtgttgtcctatatattgaggttgatattgtgtattgttgtcgcattatcgagtccttatacatgtccatgcatcacagttgagat 17343782  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatct 157  Q
    |||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  17343783 gaaatgatgttttattcattttagggcttcggcctggcagagatcttttgagatct 17343838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 22227040 - 22227195
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  22227040 atcaatataattgggtgtcgtcctatatattgagtttgagattgtgaattgttgtcgcattttcgagtccttatacatgtccatgcatcatagttgagat 22227139  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatct 157  Q
    ||||||| |||||||||||||| ||||| |||||| |||||||||| |||||||||    
T  22227140 gaaatgaagttttattcattatagggcttcggcctggcagagatctgttgagatct 22227195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 35017082 - 35017236
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| || ||||||||||||||||||||||||| |||||||||||||||||||||| | |    
T  35017082 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtga-ttgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgtt 35017180  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatct 157  Q
    || |||||||||||||||| || ||||| |||||| ||||||||||||||||||||    
T  35017181 gagatgatgttttattcatcatagggcttcggcctggcagagatcttttgagatct 35017236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 14628009 - 14628103
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14628009 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 14628103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 35017201 - 35017311
Alignment:
Q  164 atagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatc-ttttgagatctggatat 262  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35017201 atagggcttcggcctggcagagatcttttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatctttttgagatctggatat 35017300  T
Q  263 gggtgacgacc 273  Q
    |||||||||||    
T  35017301 gggtgacgacc 35017311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 162 - 273
Target Start/End: Original strand, 22227158 - 22227269
Alignment:
Q  162 ttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggata 261  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||     
T  22227158 ttatagggcttcggcctggcagagatctgttgagatctggatacgatgtgttattcgttatagggcttcggcctggcagaggtcttttgagatctggatt 22227257  T
Q  262 tgggtgacgacc 273  Q
     |||||||||||    
T  22227258 agggtgacgacc 22227269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 16230345 - 16230251
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16230345 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 16230251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 23993925 - 23993831
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23993925 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 23993831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 10487643 - 10487549
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10487643 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 10487549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 16377684 - 16377778
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16377684 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 16377778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 16385008 - 16385102
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16385008 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 16385102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 26088599 - 26088505
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  26088599 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgttgcattatcgagtcattacacatgtccatgcatcatagtcg 26088505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 1651350 - 1651446
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1651350 atcaatataattgggtgtcgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 1651446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 27655484 - 27655579
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27655484 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 27655579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 25174319 - 25174225
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  25174319 atcaatataattgagtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagttcttacacatgtccatgcattatagtcg 25174225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 25646227 - 25646390
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||| ||||| |||||||||||||||||||| || | |||| | ||||||||||||||||| |||||||  |||||||||||||||||||||| | |    
T  25646227 atcaataaaattgggtgttgtcctatatattgaggtggaaattgtggattgttgtcgcattatcaagtccttgtacatgtccatgcatcatagtcgtgtt 25646326  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatcta 158  Q
    |       | |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25646327 gagattttatatgatgttttattcattattgggctccggcctagcatagatcttttgagatcta 25646390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 33315979 - 33316075
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33315979 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 33316075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 16557413 - 16557507
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  16557413 atcaatatacttgggtgttgtcctatatattgagttgagattgtgaattgttgtcgtattatcgagtccttatacatgtccatgcatcatagtcg 16557507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 16650643 - 16650737
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  16650643 atcaatatacttgggtgttgtcctatatattgagttgagattgtgaattgttgtcgtattatcgagtccttatacatgtccatgcatcatagtcg 16650737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 1659111 - 1659207
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  1659111 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcacattatcgagtccttatacatgtccatgcatcatagtcga 1659207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 4989662 - 4989566
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| |||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4989662 atcaatataattgggtgttgtcctatatattgaggttgagattgttaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 4989566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 29870887 - 29870967
Alignment:
Q  17 gtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29870887 gtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 29870967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 23976334 - 23976239
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  23976334 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgccgcattatcgagtccttatacatgtccatgcatcatagtcg 23976239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 15861491 - 15861397
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| |||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  15861491 atcaatataattgggtgttgtcctatatattgagttgaaattgtga-ttgttgtcgcattatcgagtctttatacatgtccatgcatcatagtcga 15861397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 11214903 - 11214806
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  11214903 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatagagtacttatacatgtccatgcatcatagtcgag 11214806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 16239129 - 16239031
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaatt-gttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||  |||||||||||||||||||| |||| |||| | ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16239129 atcaatataatttggtgttgtcctatatattgaggttgaaattgtggatttgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgag 16239031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 17343788 - 17343855
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17343788 gatgttttattcattttagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 17343855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 18431397 - 18431304
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagt 95  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||  ||||||||||| ||||||||    
T  18431397 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgtatcatagt 18431304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 35017186 - 35017241
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggata 261  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  35017186 gatgttttattcatcatagggcttcggcctggcagagatcttttgagatctggata 35017241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 16827278 - 16827371
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||| |||| ||||||||||||| |  || | ||| || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16827278 caatataattgggtgtcgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 16827371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 1554600 - 1554509
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || |||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  1554600 caatataattgggtgttgtcctatatattgtggagaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 1554509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 22227148 - 22227200
Alignment:
Q  209 gttttattcgttatagggcttcggcctggcagagatcttttgagatctggata 261  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  22227148 gttttattcattatagggcttcggcctggcagagatctgttgagatctggata 22227200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 13016232 - 13016351
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatg-------aaatgatgttttattcattattgggctccggcctagcag 141  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||| | | ||       | ||||||||||||||||  || || | |||||||||||    
T  13016232 attgtagtcgcattatcgagtccttgtacatgtccatgcatcatagtagtgttgagattttatatgatgttttattcatattttggtttcggcctagcag 13016331  T
Q  142 agatcttttgagatctagtt 161  Q
    |||||| |||||||||||||    
T  13016332 agatctgttgagatctagtt 13016351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 18569350 - 18569274
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacat 79  Q
    ||||||||||||| |||||||||||||||||||| || | |||| | |||||||||||||||||||||||||| ||||    
T  18569350 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtg-attgttgtcgcattatcgagtccttatacat 18569274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 32897487 - 32897394
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagt 95  Q
    ||||||| ||||||| |||||||||||||||| | ||| | ||| |||||||||||||||||||||||| |   |||||||| |||||||||||    
T  32897487 atcaataaaattgagagttgtcctatatattgtggtgaaaattgggaattgttgtcgcattatcgagtcttgttacatgtccgtgcatcatagt 32897394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 31627202 - 31627107
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |  ||||||||||||||| | ||| | ||| |||||| ||||||||||||||||| |   ||||||||||||||||||||||    
T  31627202 atcaatataattggggattgtcctatatattgtggtgaaaattgtgaattggtgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 31627107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 16084180 - 16084086
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||||| | |||||||||||||||| |  | | |||| |||||||| ||||||||||||||| |   |||||||||||||||||||||    
T  16084180 atcaatataattgggagttgtcctatatattgtggagaaaattgtgaattgttttcgcattatcgagtcttgttacatgtccatgcatcatagtc 16084086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 16105322 - 16105228
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||||| | |||||||||||||||| |  | | |||| ||||||||||||| |||||||||| |   |||||||||||||||||||||    
T  16105322 atcaatataattgggagttgtcctatatattgtggagaaaattgtgaattgttgtcgcgttatcgagtcttgttacatgtccatgcatcatagtc 16105228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 18129046 - 18128954
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||| | |||||||||||||||||| | ||| | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  18129046 caatataatcgggtgttgtcctatatattgtggtgaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 18128954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 19984607 - 19984698
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || |||| | |||||||||| |||||| |||| |   ||||||||||||||||||||||    
T  19984607 caatataattgggtgttgtcctatatattgtggagaaattgtg-attgttgtcgaattatctagtcttgttacatgtccatgcatcatagtcg 19984698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 18397690 - 18397595
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| | |||| ||||||||||| | ||| | |||   |||||||||||||||||||||| |   ||||||||||||||||||||||    
T  18397690 atcaatataattgggagttgccctatatattgtggtgaaaattgtagattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 18397595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 23152018 - 23151929
Alignment:
Q  8 tataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||| |||||||||||||||||| |  || | ||| || || |||||||||||||||||| |   ||||||||||||||||||||||    
T  23152018 tataattgggtgttgtcctatatattgtggagaaaattgtga-ttattgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 23151929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 25646339 - 25646389
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| ||||| |||||| ||| ||||||||||||||||    
T  25646339 gatgttttattcattattgggctccggcctagcatagatcttttgagatct 25646389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 3 - 273
Target Start/End: Complemental strand, 7424437 - 7424169
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatg 102  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7424437 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagatg 7424338  T
Q  103 aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgga 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||  ||||||||| ||||||||||||    
T  7424337 aaatgatgttttattcattattgggctccggcctagcagagatcttttaggatctagttt--tagggcttcggcctggcagagatcttttgagatctgga 7424240  T
Q  203 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  7424239 tacgatgttttattcgttatagggcttcggcctgacagagatcttttgagatctggatttgggtgacgacc 7424169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 18779513 - 18779781
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatg 102  Q
    |||||||||||||  ||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18779513 atcaatataattggttgtcgtcatatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagatg 18779612  T
Q  103 aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgga 202  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||| ||||||||||||    
T  18779613 aaatgatgttttattcattattgggcttcggcctagcagagatcttttgggatctagttt--tagggcttcggcctggcagagatcttttgagatctgga 18779710  T
Q  203 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  18779711 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgatgacc 18779781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 17473289 - 17473558
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17473289 atcaatataattgggtgtcgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagat 17473388  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||| || |  ||||||||| |||||||||||    
T  17473389 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgaggtctagttt--tagggcttcagcatggcagagatcttttgagatctgg 17473486  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17473487 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 17473558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 1170061 - 1170329
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| ||||| |||||||||||||| ||| | ||  | ||||||||||| |||||||||| |   |||||||||||||||||||||| | |    
T  1170061 atcaatataattgggtgttctcctatatattgaggtgaaaattttggattgttgtcgcgttatcgagtcttattacatgtccatgcatcatagtcgtgtt 1170160  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||| ||||||||| |    
T  1170161 gagatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtttt---gggcttcggcctagcagagatcttttgagatctag 1170257  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1170258 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctagatatgggtgacgacc 1170329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 49 - 273
Target Start/End: Complemental strand, 24471017 - 24470796
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaaatgatgttttattcattattgggctccggcctagcagagatctt 148  Q
    |||||||||||||||||||||| |   |||||| ||||||||||||||| | ||| ||||||||||||||||||||||| | ||||||||||||||||||    
T  24471017 attgttgtcgcattatcgagtcttgttacatgttcatgcatcatagtcgtgttgagatgatgttttattcattattgggtttcggcctagcagagatctt 24470918  T
Q  149 ttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttt 248  Q
    |||||||||||||||   ||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24470917 ttgagatctagtttt---gggcttcggcctagcagagatcttttgagatctagatacgatgttttattcgttatagggcttcggcctggcagagatcttt 24470821  T
Q  249 tgagatctggatatgggtgacgacc 273  Q
    ||||||||||| |||||||||||||    
T  24470820 tgagatctggacatgggtgacgacc 24470796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 3 - 268
Target Start/End: Complemental strand, 23510751 - 23510486
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| | || |||| | |||||||||||||||||||||||||  |||||||||||||||||||||| | |    
T  23510751 atcaatataattgggtgttgtcctatatattgaggtagaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 23510652  T
Q  102 gaaat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    || ||  |||||||||||| | || ||||| |||||| ||||||||||||||||||||||||||   || ||| || | | ||||||||| |||||||||    
T  23510651 gagatacgatgttttattcgtaatagggcttcggcctggcagagatcttttgagatctagtttt---ggacttaggtcgagcagagatcttttgagatct 23510555  T
Q  200 ggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtga 268  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23510554 ggatacgatgttttattcgttatagggcttcggcctggcatagatcttttgagatctggatatgggtga 23510486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 50 - 273
Target Start/End: Original strand, 25192563 - 25192785
Alignment:
Q  50 ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaaat--gatgttttattcattattgggctccggcctagcagagatct 147  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| | ||| ||  |||||||||||| |||| ||||| |||||| ||||||||||    
T  25192563 ttgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgttgagatacgatgttttattcgttatagggcttcggcctggcagagatct 25192662  T
Q  148 tttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatctt 247  Q
    ||||||||||||||||   || |||||| ||| | ||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  25192663 tttgagatctagtttt---ggacttcggtctagctgagatcttttgagatctggatatgatgttttatttgttatagggcttcggcctggtagagatctt 25192759  T
Q  248 ttgagatctggatatgggtgacgacc 273  Q
    ||||||| ||||||||||||||||||    
T  25192760 ttgagatttggatatgggtgacgacc 25192785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 164 - 273
Target Start/End: Complemental strand, 11582515 - 11582406
Alignment:
Q  164 atagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatg 263  Q
    |||||||||||||||  ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11582515 atagggcttcggcctggcagagatcttttgagatctagatacgatgttttattcgttatagggcttcggcttggcagagatcttttgagatctggatatg 11582416  T
Q  264 ggtgacgacc 273  Q
    ||||||||||    
T  11582415 ggtgacgacc 11582406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 9732185 - 9732279
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9732185 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 9732279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 25901844 - 25901938
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25901844 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 25901938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 27008772 - 27008678
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27008772 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 27008678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 19498560 - 19498466
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19498560 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttacacatgtccatacatcatagtcg 19498466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 21933678 - 21933772
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21933678 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 21933772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 21939848 - 21939942
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21939848 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 21939942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 23327713 - 23327619
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23327713 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 23327619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 35581014 - 35580920
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35581014 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 35580920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 37010682 - 37010776
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37010682 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 37010776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 11582635 - 11582478
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    |||||||||||||  ||||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||| |||||| ||||||||||||||| |      
T  11582635 atcaatataattggatgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttatacatgttcatgcatcatagtcgtgtg 11582536  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctag 159  Q
    || | |||||||||||||| || ||||| |||||| ||||||||||||||||||||||    
T  11582535 gagacgatgttttattcatcatagggcttcggcctggcagagatcttttgagatctag 11582478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 21652802 - 21653003
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||  |||||||||||||| ||||||  | |    
T  21652802 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcattatagtcatgtt 21652901  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttga 194  Q
    |       | | |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||   ||||||||||||  ||||||| | ||||    
T  21652902 ggggatttatacgatgttttattcgttattgggctccggcctagcagagatcttttgagatatagtttt---gggcttcggccttgcagagatattttga 21652998  T
Q  195 gatct 199  Q
    |||||    
T  21652999 gatct 21653003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 24595261 - 24595169
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagt 95  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24595261 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagt 24595169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 28258361 - 28258195
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | ||||| |||||||||||||||||||  |||||||||||||||||||||| | |    
T  28258361 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgtcgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 28258262  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtt 161  Q
    |       | |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  28258261 gagattttatatgatgttttattcattattgggcgccggccttgcagagatcttttgagatctagtt 28258195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 21075006 - 21075101
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21075006 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 21075101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 11110 - 11016
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11110 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagttcttacacatgtccatgcatcatagtcg 11016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 11341396 - 11341302
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  11341396 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattattgagtccttatacatgtccatgcatcatagtcg 11341302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 22368001 - 22368096
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22368001 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 22368096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 22884700 - 22884795
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22884700 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 22884795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 25425382 - 25425288
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| |||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25425382 atcaatataattgggtgtcgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 25425288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 110501 - 110597
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  110501 atcaatataattgggtgttgtcctgtatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 110597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 43445271 - 43445366
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  43445271 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatatccatgcatcatagtcg 43445366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 29192137 - 29192230
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  29192137 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagttcttac-catgtccatgcatcatagtcg 29192230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 21392949 - 21392782
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| || ||||||||||||||||| ||| | ||| | |||||||||||||||| ||||||||  |||||||||||||||||||||| | |    
T  21392949 atcaatataattgggttttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatggagtccttgtacatgtccatgcatcatagtcgtgtt 21392850  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    |       | |||||||||| ||||||||||||||||||||||||||||||| || | ||||||||||    
T  21392849 gagattatatatgatgttttcttcattattgggctccggcctagcagagatcattagtgatctagttt 21392782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 10779696 - 10779792
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| ||||| || ||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10779696 atcaatataattgggtgttatcatatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 10779792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 1221248 - 1221343
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||  ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1221248 atcaatataattgggtgttgtcctatatattgaggttgaagttgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 1221343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 4201484 - 4201578
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || |||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4201484 atcaatataattgggtgttgtcctatatattgagtttgaaattgtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 4201578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 23513557 - 23513462
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23513557 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 23513462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 21234924 - 21235018
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21234924 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 21235018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 20615372 - 20615278
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20615372 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtctttacacatgtccatgcatcatagtcg 20615278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 20710898 - 20710803
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||| |||||||||||||| ||| | ||| | |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  20710898 atcaatataattgggtgttctcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcg 20710803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 37051744 - 37051650
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||| || |||||||||||||||||||||||    
T  37051744 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtctttgcacatgtccatgcatcatagtcg 37051650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 28258192 - 28258137
Alignment:
Q  107 gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28258192 gatgttttattcgttattgggctccggcctagcagagatcttttgagatctagttt 28258137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 256
Target Start/End: Complemental strand, 28258217 - 28258142
Alignment:
Q  181 cagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    ||||||||| ||||||||| | |||||||||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  28258217 cagagatcttttgagatctagttacgatgttttattcgttattgggctccggcctagcagagatcttttgagatct 28258142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 11582537 - 11582475
Alignment:
Q  199 tggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggata 261  Q
    |||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||    
T  11582537 tggagacgatgttttattcatcatagggcttcggcctggcagagatcttttgagatctagata 11582475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 24184613 - 24184710
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| | |||||||||||||||| | ||| | ||| | |||||||||||||||||||||| |   ||||||||||||||||||||||||    
T  24184613 atcaatataattgggagttgtcctatatattgtggtgaaaattgtgtattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgag 24184710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 21652910 - 21652962
Alignment:
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagat 254  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  21652910 atacgatgttttattcgttattgggctccggcctagcagagatcttttgagat 21652962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 35792654 - 35792748
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||||    
T  35792654 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgag 35792748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 27185236 - 27185327
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||| || ||||||||||||||| | ||||| ||| || ||||||||||||||||||||| |   |||||| ||||||||||||||    
T  27185236 caatataattgggtattgtcctatatattgtggtgagaattgtga-ttgttgtcgcattatcgagtcttgttacatgttcatgcatcatagtc 27185327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 16535064 - 16534972
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || |||||||||||||||| |||| |   ||||||||||||||||||||||    
T  16535064 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcaagtcttgttacatgtccatgcatcatagtcg 16534972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 21649588 - 21649496
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| ||||| |||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  21649588 caatataattgggtgttatcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttattacatgtccatgcatcatagtcg 21649496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 11582473 - 11582423
Alignment:
Q  107 gatgttttattcattattgggctccggcctagcagagatcttttgagatct 157  Q
    |||||||||||| |||| ||||| |||| | ||||||||||||||||||||    
T  11582473 gatgttttattcgttatagggcttcggcttggcagagatcttttgagatct 11582423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 28258249 - 28258199
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| ||||  |||||| ||||||||||||||||||||    
T  28258249 gatgttttattcattattgggcgccggccttgcagagatcttttgagatct 28258199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 3672699 - 3672655
Alignment:
Q  56 tcgcattatcgagtccttac-acatgtccatgcatcatagtcgag 99  Q
    ||||||||||||||| || | ||||||||||||||||||||||||    
T  3672699 tcgcattatcgagtctttgctacatgtccatgcatcatagtcgag 3672655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 5452269 - 5452313
Alignment:
Q  54 tgtcgcattatcgagtccttac-acatgtccatgcatcatagtcg 97  Q
    ||||||||||||||||| || | ||||||||||||||||||||||    
T  5452269 tgtcgcattatcgagtctttgctacatgtccatgcatcatagtcg 5452313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 15295519 - 15295787
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatg 102  Q
    ||||||||||||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15295519 atcaatataattgggtgtcgtcctatatattgagttgagtttgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagatg 15295618  T
Q  103 aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgga 202  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||| ||||||||||||    
T  15295619 aaatgatgttttatttattattgggctccggcctagcagagatcttttgggatctagttt--tagggcttcggcctggcagagatcttttgagatctgga 15295716  T
Q  203 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  15295717 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatatggatttgggtgacgacc 15295787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 273
Target Start/End: Complemental strand, 18167551 - 18167282
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatg 102  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||    
T  18167551 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgttg 18167452  T
Q  103 aaat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctg 200  Q
    | ||  ||| |||||||| |||| ||||| |||||| ||||||||||||||||||||||||||   || |||||| ||| ||||||||| ||||||||||    
T  18167451 agatacgatattttattcgttatagggcttcggcctggcagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatctg 18167355  T
Q  201 gatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  18167354 gatacgatgttttattcgttatagggcttcggcctggaagggatcttttgagatctggatatgggtgacgacc 18167282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 53909170 - 53909439
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||| ||||||||| ||| | ||| | |||||||||||||||||||||| |   |||||||||||||||||||||| | |    
T  53909170 atcaatataattgggtgttgtcctgtatattgaggtgaaaattgtggattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgtgtt 53909269  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
     | |||||||||||||||| || ||||| |||||| ||||||||||||||||||||||||  |||||| ||||||||  ||||||||| |||||||||||    
T  53909270 aagatgatgttttattcatcatagggcttcggcctggcagagatcttttgagatctagtt--atagggtttcggcctggcagagatcttttgagatctgg 53909367  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53909368 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 53909439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 3 - 273
Target Start/End: Complemental strand, 10642945 - 10642675
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||| | |    
T  10642945 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgtt 10642846  T
Q  102 gaaat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    || |   |||||||||||| | || ||||| |||||| |||||||| |||||||||||||||||   || |||||| ||| ||||||||| |||||||||    
T  10642845 gagagacgatgttttattcttcatagggcttcggcctggcagagatattttgagatctagtttt---ggacttcggtctagcagagatcttttgagatct 10642749  T
Q  200 ggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10642748 ggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 10642675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 3 - 203
Target Start/End: Original strand, 15288409 - 15288607
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatg 102  Q
    ||||||||||||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15288409 atcaatataattgggtgtcgtcctatatattgagttgagtttgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagatg 15288508  T
Q  103 aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgga 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||| ||||||||||||    
T  15288509 aaatgatgttttattcattattgggctccggcctagcagagatcttttgggatctagttt--tagggcttcggcctggcagagatcttttgagatctgga 15288606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 9294280 - 9294013
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||| ||||||||||||| |  || | ||| || ||||||||||||||||||||||||| |||||||||||||||||||||| | |||    
T  9294280 caatataattgggtgtcgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgttga 9294182  T
Q  104 aat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
     ||  |||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||   || |||||| | | ||||||||| |||||||||||    
T  9294181 gatacgatgttttattcgttatagggcttcggcctagcagagatcttttgagatctagtttt---ggacttcggtcgagcagagatcttttgagatctgg 9294085  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||    
T  9294084 atacgatgttttattcgttatagggcttaagcatggcagagatcttttgagatctggatatgggtgacgacc 9294013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 3 - 261
Target Start/End: Complemental strand, 13245210 - 13244970
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| || | ||||||||||||||| |||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  13245210 atcaatataattgggtttcgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagtt 13245111  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    || |||||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||||  | |||||||| |||  ||||||||| ||||||||       
T  13245110 gagatgatgatttattcattattgggcttcggcctagctgagatcttttgaggtctagttt--tggggcttcgtcctggcagagatcttttgagatc--- 13245016  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggata 261  Q
                  | ||||||||||||||||||||||||||||||||||||||||||||    
T  13245015 --------------tagttatagggcttcggcctggcagagatcttttgagatctggata 13244970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 44345585 - 44345381
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| ||||||||| |||||||||| ||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||||||| | |    
T  44345585 atcaatataattgggtgttgtcccatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 44345486  T
Q  102 gaaat-------gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttga 194  Q
    || ||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||  ||||||||| ||||    
T  44345485 gagattttatatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtttttttgggcttcagccttgcagagatcttttga 44345386  T
Q  195 gatct 199  Q
    |||||    
T  44345385 gatct 44345381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 125 - 261
Target Start/End: Complemental strand, 13245047 - 13244913
Alignment:
Q  125 gggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatag 224  Q
    ||||| || ||| ||||||||||||||||||||||||  |||||||||||||||  ||||||||| |||||||||||||||||| |||||||||||||||    
T  13245047 gggcttcgtcctggcagagatcttttgagatctagtt--atagggcttcggcctggcagagatcttttgagatctggatacgatattttattcgttatag 13244950  T
Q  225 ggcttcggcctggcagagatcttttgagatctggata 261  Q
    |||||||||||||||||||||||||||||||||||||    
T  13244949 ggcttcggcctggcagagatcttttgagatctggata 13244913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 125 - 273
Target Start/End: Original strand, 53706327 - 53706473
Alignment:
Q  125 gggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatag 224  Q
    ||||| |||||| | |||||||||||||||||||||||||  |||||| |||||  ||||||||| ||||| ||| ||||||||||||||||||||||||    
T  53706327 gggcttcggcctggaagagatcttttgagatctagtttta--gggctttggcctggcagagatcttttgaggtctagatacgatgttttattcgttatag 53706424  T
Q  225 ggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  53706425 ggcttcggtctggcagggatcttttgagatctggatatgggtgacgacc 53706473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 13049563 - 13049657
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13049563 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 13049657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 15274159 - 15274253
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15274159 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 15274253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 14950777 - 14950683
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14950777 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 14950683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 26338243 - 26338149
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26338243 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 26338149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 33739023 - 33738855
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc----- 96  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||||||         
T  33739023 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 33738924  T
Q  97 --gagatgaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtttt 163  Q
      ||| | | ||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||    
T  33738923 gagagtttatatgatgttttattcattatcgggctccggcctagccgagatcatttgtgatctagtttt 33738855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 7133971 - 7134080
Alignment:
Q  164 atagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatg 263  Q
    |||||||||||||||  || ||| || |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||    
T  7133971 atagggcttcggcctggcaaagaccttttgagatctggatacgatgttttattcgttatagggcttcggtctggcatagatcttttgagatctggatttg 7134070  T
Q  264 ggtgacgacc 273  Q
    ||||||||||    
T  7134071 ggtgacgacc 7134080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 22355965 - 22356057
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  22355965 caatataattgggtgttgtcctatatattgagttgagattgtgaactgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 22356057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 19999286 - 19999191
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19999286 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 19999191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 47356084 - 47355989
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47356084 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 47355989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 54119661 - 54119823
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||||||| |||||||||| | |    
T  54119661 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgtatcatagtcgtgtt 54119760  T
Q  102 gaaatgatgttttattcatta-------ttgggctccggcctagcagagatcttttgagatct 157  Q
    ||  ||||| |||||||||||       | ||||| |||||| ||||||||||||||||||||    
T  54119761 gaggtgatgatttattcattatagggcttagggcttcggcctggcagagatcttttgagatct 54119823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 165 - 272
Target Start/End: Original strand, 54119789 - 54119897
Alignment:
Q  165 tagggcttcggcctatcagagatctgttgagatctggatacgatgttttatt-cgttatagggcttcggcctggcagagatcttttgagatctggatatg 263  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||||||||||||||||| ||    
T  54119789 tagggcttcggcctggcagagatcttttgagatctggatacgatgtttgatttcgctatagggcttcggcctgacagagatcttttgagatctggatttg 54119888  T
Q  264 ggtgacgac 272  Q
    |||||||||    
T  54119889 ggtgacgac 54119897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 18246947 - 18246855
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagt 95  Q
    ||||||||||||| |||| |||||||||||||||||||||||| || || ||||||||||||||||| |||||||||||||||||||||||||    
T  18246947 atcaatataattgggtgtcgtcctatatattgagttgagattgtgattttttgtcgcattatcgagttcttacacatgtccatgcatcatagt 18246855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 26678802 - 26678708
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || |||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26678802 atcaatataattgggtgttgtcctatatattgagtttgaaattgtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 26678708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 10487428 - 10487334
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10487428 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 10487334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 16329323 - 16329417
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16329323 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 16329417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 14994951 - 14994858
Alignment:
Q  7 atataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||| |||||||||||||||||||| |||| |||| | ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  14994951 atataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagttcttatacatgtccatgcatcatagtcgag 14994858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 7133851 - 7134006
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||||||||||||||||| |  | | |||| ||| |||||||||||||||||||||||  |||||||||||||||||||||| | |||    
T  7133851 caatataattgggtgttgtcctatatattgtggagaaaattgtgaaatgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgttga 7133950  T
Q  104 aat--gatgttttattcattattgggctccggcctagcagagatcttttgagatct 157  Q
     ||  |||||||||||| | || ||||| |||||| ||| ||| ||||||||||||    
T  7133951 gatacgatgttttattcgtcatagggcttcggcctggcaaagaccttttgagatct 7134006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 45460357 - 45460509
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc----- 96  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| ||||||| |||||||||| ||||||||  |||||||||||||||||||||         
T  45460357 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtgaattgtcgtcgcattattgagtccttgtacatgtccatgcatcatagtcgtgtt 45460456  T
Q  97 gaga-tgaaatgatgtttt--attcattattgggctccggcctagcagagatc 146  Q
    |||| ||| ||||||||||   | ||| |||||||||||||||||||||||||    
T  45460457 gagattgatatgatgtttttgttgcatcattgggctccggcctagcagagatc 45460509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 13244955 - 13244870
Alignment:
Q  162 ttatagggcttcggcctatcagagatctgttgagatctggatacgatgtttta-ttcgttatagggcttcggcctggcagagatct 246  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||| | ||||||||||||||||| |||| |||||||||    
T  13244955 ttatagggcttcggcctggcagagatcttttgagatctggatacgatgtttgatttcgttatagggcttcgacctgtcagagatct 13244870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 53706190 - 53706285
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | ||| || | ||||||||||||||||| ||||||||||||||||||||||    
T  53706190 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattattattgcattatcgagtccttatacatgtccatgcatcatagtcg 53706285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 7133951 - 7134011
Alignment:
Q  201 gatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggata 261  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  7133951 gatacgatgttttattcgtcatagggcttcggcctggcaaagaccttttgagatctggata 7134011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 15288569 - 15288620
Alignment:
Q  222 tagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15288569 tagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 15288620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 44054680 - 44054585
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| | |||||||||||||||| | ||| | ||| |||||||||||||||||||||||| |   ||||||||||||||||||||||    
T  44054680 atcaatataattgggagttgtcctatatattgtggtgaaaattgggaattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 44054585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 12901172 - 12901265
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagt 95  Q
    ||||||||||||| |||| ||||||||||||||| ||| | ||| | |||||||||||||||||||||| |   ||||||||||||||||||||    
T  12901172 atcaatataattgggtgtcgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagt 12901265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 34393809 - 34393717
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| | ||| | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  34393809 caatataattgggtgttgtcctatatattgtggtgaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 34393717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 13751694 - 13751789
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| | |||||  ||||||||| | ||| | ||| | |||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  13751694 atcaatataattgggagttgtgttatatattgtggtgaaaattgtggattgttgtcgcattatcgagtctttgtacatgtccatgcatcatagtcg 13751789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 21960968 - 21961063
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||||||  || |||||||||||||||| | ||| | ||| |||||||||| ||||||||||||| |   ||||||||||||||||||||||    
T  21960968 atcaatataatcaagagttgtcctatatattgtggtgaaaattgtgaattgttgttgcattatcgagtcttgttacatgtccatgcatcatagtcg 21961063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 8873896 - 8873988
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  8873896 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 8873988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 30235942 - 30236045
Alignment:
Q  52 gttgtcgcattatcgagtccttacacatgtccatgcatcatagtc-----gaga--tgaaatgatgtttt--attcattattgggctccggcctagcaga 142  Q
    ||||||||||||||||||||||  |||||||||||||||||||||     ||||  ||| ||||||||||   | ||| |||||||||||||||||||||    
T  30235942 gttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcatgttgagatttgatatgatgtttttgttgcatcattgggctccggcctagcaga 30236041  T
Q  143 gatc 146  Q
    ||||    
T  30236042 gatc 30236045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 16521544 - 16521450
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||| |||| ||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||||    
T  16521544 caatataattgggtgtcgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgag 16521450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 44345473 - 44345423
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  44345473 gatgttttattcattattgggctccggcctagcagagatcttttgagatct 44345423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 110236 - 110144
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||  |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  110236 caatataattgggtgttgtcctatatattatggagaaaattgtga-ttgttgtcgcattatcgagtcttattacatgtccatgcatcatagtcg 110144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 15212054 - 15212005
Alignment:
Q  48 aattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||||||||||||| |   ||||||||||||||||||||||    
T  15212054 aattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 15212005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 25120524 - 25120616
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||| ||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  25120524 caatataattgggtgtcgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 25120616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 5684349 - 5684397
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||||||||||||||||| |   ||||||||||||||||||||||    
T  5684349 attgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 5684397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 273
Target Start/End: Original strand, 16366315 - 16366369
Alignment:
Q  218 gttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||| |||||||||||| ||||||||| || | ||||||||||||||||||||||    
T  16366315 gttattgggcttcggcctagcagagatccttgg-gatctggatatgggtgacgacc 16366369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 13244964 - 13244918
Alignment:
Q  111 ttttattcattattgggctccggcctagcagagatcttttgagatct 157  Q
    |||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  13244964 ttttattcgttatagggcttcggcctggcagagatcttttgagatct 13244918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 15288513 - 15288563
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| ||||| |||||| |||||||||||||| |||||    
T  15288513 gatgttttattcattattgggctccggcctagcagagatcttttgggatct 15288563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 53706325 - 53706359
Alignment:
Q  222 tagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||||||| ||||||||||||||||||    
T  53706325 tagggcttcggcctggaagagatcttttgagatct 53706359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 53706288 - 53706359
Alignment:
Q  124 tgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    |||||| ||||||||||||| |  |||||||||||||||||  ||||||||||||   |||||||| |||||||||    
T  53706288 tgggcttcggcctagcagaggt--tttgagatctagtttta--gggcttcggcctggaagagatcttttgagatct 53706359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 54119845 - 54119885
Alignment:
Q  163 tatagggcttcggcctatcagagatctgttgagatctggat 203  Q
    ||||||||||||||||  ||||||||| |||||||||||||    
T  54119845 tatagggcttcggcctgacagagatcttttgagatctggat 54119885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 21651342 - 21651610
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatg 102  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  21651342 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgtattatcgagtccttatacatgtccatgcatcatagtcgagatg 21651441  T
Q  103 aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgga 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||| ||||||||||||    
T  21651442 aaatgatgttttattcattattgggctccggcctagcagagatcttttgggatctagttt--tagggcttcggcctggcagagatcttttgagatctgga 21651539  T
Q  203 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  21651540 tacgatgttttattcgttatagggcttttgcctggcagagatcttttgagatctggatttgggtgacgacc 21651610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 3 - 273
Target Start/End: Complemental strand, 22365512 - 22365244
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22365512 atcaatataattgggtgttgtcctatatattgaggttgatattgtgtattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagat 22365413  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||   || |||||| ||| ||||||||| |||||||||||    
T  22365412 gaaatgatgttttattcattattgggcttcggcctggcagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatctgg 22365316  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22365315 atatgatgttttattcgttatagggcttcggcttggcagagatcttttgagatctggatatgggtgacgacc 22365244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 3 - 273
Target Start/End: Complemental strand, 41210803 - 41210535
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||  ||||||||||||||||| || ||| | ||| | |||||||||||||||||||||||||| |||||||||||||||||||||| | |    
T  41210803 atcaatataattaggtgttgtcctatatattaaggtgaaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgtt 41210704  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||   |||||||| ||||  ||| |||| ||||||||| |    
T  41210703 gagatgatgttttattcattattgggctctggcctagcagagatcttttgagatctagtttt---gggcttcgtcctagtagacatcttttgagatctag 41210607  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41210606 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 41210535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 3 - 273
Target Start/End: Complemental strand, 18506114 - 18505847
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||||| | | |    
T  18506114 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagttgtgtt 18506015  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| ||||| ||||||||| ||||||||| |    
T  18506014 gagatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtttt---gggcttcagcctagcagagatcttttgagatcttg 18505918  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
     ||||||||||||||| |||| |||||||||||| |||||||||  ||| ||||||||||||||||||||||    
T  18505917 ttacgatgttttattcattattgggcttcggcctagcagagatc-cttgggatctggatatgggtgacgacc 18505847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 9785642 - 9785907
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    |||||||||||||||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |  ||||||||||| ||||||||||| | |||    
T  9785642 caatataattgagtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgtcacatgtccatacatcatagtcgtgttga 9785740  T
Q  104 aatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggat 203  Q
     ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||   |||||||| |||| ||||||||| ||||||||| |||    
T  9785741 gatgatgttttattcattattgggtttcggcctagcagagatcttttgagttctagtttt---gggcttcgtcctagcagagatcttttgagatctagat 9785837  T
Q  204 acgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9785838 acgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 9785907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 21858311 - 21858045
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||| ||||||||||||| |   |||||||||||||||||||||| |||||    
T  21858311 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgttgcattatcgagtcttgttacatgtccatgcatcatagtcgtgatga 21858213  T
Q  104 aatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggat 203  Q
     |||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||  |||||| |||||  ||||||||| ||||||| |||||    
T  21858212 gatgatgttttattcattattgggctccggcctagaagggatcttttgaggtctagtttta--gggctttggcctggcagagatcttttgagatttggat 21858115  T
Q  204 acgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21858114 acgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 21858045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 22250362 - 22250615
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||| ||||||||||||| |  || | ||| || ||||||||||||||||||||||||| |||||||||||||||||||||| | ||     
T  22250362 caatataattgggtgtagtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgttgg 22250460  T
Q  104 a-atgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgga 202  Q
    | | |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||   || |||||| ||| ||||||||| ||||||||| ||    
T  22250461 atacgatgttttattcgttattgggcttcggcctagcagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatctaga 22250557  T
Q  203 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 260  Q
    ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22250558 tacaatgttttattcgttatagggcttcggcctggaagagatcttttgagatctggat 22250615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 18602451 - 18602545
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18602451 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 18602545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 20826629 - 20826723
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20826629 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 20826723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 138 - 273
Target Start/End: Original strand, 20895264 - 20895398
Alignment:
Q  138 gcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttatt-cgttatagggcttcggcctg 236  Q
    ||||||||||||||||||||||||  |||||||||||||||   |||||||| ||||||| ||||| |||||||| ||| ||||||||||||||||||||    
T  20895264 gcagagatcttttgagatctagtt--atagggcttcggcctggaagagatcttttgagatgtggatgcgatgtttgatttcgttatagggcttcggcctg 20895361  T
Q  237 gcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||| |||||||||||||||||    
T  20895362 gcagagatcttttgagatcaggatatgggtgacgacc 20895398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7641996 - 7642092
Alignment:
Q  1 tcatcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7641996 tcatcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 7642092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 45050440 - 45050344
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45050440 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 45050344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 20895098 - 20895283
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||| ||||||||||||||||| |||||||||||||||||||||| | |    
T  20895098 atcaatataattgtgtgttgtcctatatattgaggttgaaattgtggattgttgtggcattatcgagtccttatacatgtccatgcatcatagtcgtgtt 20895197  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    ||           ||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||| || |  ||||||||| |||||||||    
T  20895198 ga----------gattcattattgggcttcggcctagcagagatcttttgagatctagttt--tagggcttccgcttggcagagatcttttgagatct 20895283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 17003581 - 17003487
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17003581 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 17003487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 22034605 - 22034511
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22034605 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 22034511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 41393208 - 41393114
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41393208 atcaatataattgggtgttgtcctatatactgagttgagattgtgaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 41393114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 5073708 - 5073802
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||    
T  5073708 atcaatataattgggtgttgtcctatatattgagttgagattgagaattggtgtcgcattatcgagtcattacacatgaccatgcatcatagtcg 5073802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 18061015 - 18061109
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18061015 atcaatataattgggtgtagtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 18061109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 22226738 - 22226641
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22226738 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgag 22226641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 49966406 - 49966239
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| || | |||| | |||||||||||||||||||||||||  |||||||||||||||||||| | | |    
T  49966406 atcaatataattgggtgttgtcctatatattgaggtggaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtagtgtt 49966307  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    |       | |||||||||||||||||||||||||||||||| ||||||||| || | ||||||||||    
T  49966306 gagattttatatgatgttttattcattattgggctccggcctggcagagatcattagtgatctagttt 49966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 22029439 - 22029359
Alignment:
Q  17 gtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22029439 gtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 22029359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 15862839 - 15862933
Alignment:
Q  4 tcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    |||||||||||| |||||||||||||||||||||| || |||| || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15862839 tcaatataattgggtgttgtcctatatattgagtttgaaattgtga-ttgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 15862933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 51451369 - 51451275
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51451369 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 51451275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 2422377 - 2422533
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | |||||||||||||||||||||| |   |||||||||||||||||||||| | |    
T  2422377 atcaatataattgggtgttgtcctatatattgaggtgaaagttgtggattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgtgtt 2422476  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttg 151  Q
    |       | |||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  2422477 gagattttatatgatgttttattcattattaggccccgacctagcagagatcttttg 2422533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 17147539 - 17147444
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||| | |||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  17147539 atcaatataattgggtgtcgtcctatatattgaggttgaaattgtggattgttgttgcattatcgagtccttatacatgtccatgcatcatagtcg 17147444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 22352885 - 22352790
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22352885 atcaatataattgggtgttgtcctatatattgaggttgaaattgttgtttgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 22352790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 22407601 - 22407696
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | ||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  22407601 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatccagtccttgtacatgtccatgcatcatagtcg 22407696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 161
Target Start/End: Original strand, 2422531 - 2422649
Alignment:
Q  50 ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaaat-------gatgttttattcattattgggctccggcctagcaga 142  Q
    ||||||||||||||||||||| |   |||||||||||||||||||||| | ||| ||       |||||||||||||||||| ||| ||| |||||||||    
T  2422531 ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgtgttgagattttatatgatgttttattcattattaggccccgacctagcaga 2422630  T
Q  143 gatcttttgagatctagtt 161  Q
    |||||||||||||||||||    
T  2422631 gatcttttgagatctagtt 2422649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 35523826 - 35523923
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| | |||||||||||||||| | ||| | ||| |||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  35523826 atcaatataattgggagttgtcctatatattgtggtgaaaattgtgaattgttgtcgcattatcgagtcttgttgcatgtccatgcatcatagtcgag 35523923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 21716961 - 21716866
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||| | |||||||||||||||| | ||| | ||| |||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  21716961 caatataattgggagttgtcctatatattgtggtgaaaattgtgaattgttgtcgcattatcgagtcttgttgcatgtccatgcatcatagtcgag 21716866  T

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Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 20122065 - 20122107
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattg 45  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  20122065 atcaatataattgggtgttgtcctatatattgagttgagattg 20122107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 5676009 - 5676101
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| | ||| | ||| || ||||||||||||||||||||| |   |||||| |||||||||||||||    
T  5676009 caatataattgggtgttgtcctatatattgtggtgaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgttcatgcatcatagtcg 5676101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 35053597 - 35053505
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| | ||| | ||| || ||||||||||||||| ||||| |   ||||||||||||||||||||||    
T  35053597 caatataattgggtgttgtcctatatattgtggtgaaaattgtga-ttgttgtcgcattattgagtcttgttacatgtccatgcatcatagtcg 35053505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 37845874 - 37845965
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   |||||||||||||||||||||    
T  37845874 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 37845965  T

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Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 20930228 - 20930136
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||  |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  20930228 caatataattgggtgttgtcctatatattatggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 20930136  T

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Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 41218208 - 41218116
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||| ||||||||||||| | ||| | ||| || ||||||||||||||||||||| |    |||||||||||||||||||||    
T  41218208 caatataattgggtgtcgtcctatatattgtggtgaaaattgtga-ttgttgtcgcattatcgagtcttgttgcatgtccatgcatcatagtcg 41218116  T

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Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 20526829 - 20526781
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||||||||||||||||| |   ||||||||||||||||||||||    
T  20526829 attgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 20526781  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 20895201 - 20895243
Alignment:
Q  214 attcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||| |||| |||||||||||| ||||||||||||||||||||    
T  20895201 attcattattgggcttcggcctagcagagatcttttgagatct 20895243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 44036308 - 44036400
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| ||||||||||||| |||| |  || | ||| || ||||||||||||||||||||| |   ||||||| ||||||||||||||    
T  44036308 caatataattgggtgttgtcctatacattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtctatgcatcatagtcg 44036400  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 27673559 - 27673515
Alignment:
Q  54 tgtcgcattatcgagtccttac-acatgtccatgcatcatagtcg 97  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||    
T  27673559 tgtcgcattatcgagtctttactacatgttcatgcatcatagtcg 27673515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 3 - 273
Target Start/End: Complemental strand, 461497 - 461229
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  461497 atcaatataattgggtgtcgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagat 461398  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    ||||||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||  |||||||||||||||  ||||||||| ||||||| |||    
T  461397 gaaatgatgatttattcattat-gggcttcggcctggcagagatcttttgagatctagtt--atagggcttcggcctggcagagatcttttgagatatgg 461301  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  461300 atacgatgttttattcgttatagggcttcagcctggcagagatcttttgagatctggatttgggtgacgacc 461229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 49 - 273
Target Start/End: Original strand, 9654275 - 9654497
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaaatgatgttttattcattattgggctccggcctagcagagatctt 148  Q
    |||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9654275 attgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgagatgaaatgatgttttattcattattgggctccggcctagcagagatatt 9654374  T
Q  149 ttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttt 248  Q
    |||| |||||||||  ||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9654375 ttgaaatctagttt--tagggcttcagcctggcagagatcttttgagatctggatacgatgttttattcgttatagggcttcggcctgacagagatcttt 9654472  T
Q  249 tgagatctggatatgggtgacgacc 273  Q
    |||||||||||| ||||||||||||    
T  9654473 tgagatctggatttgggtgacgacc 9654497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 271
Target Start/End: Complemental strand, 24967056 - 24966782
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | ||||| ||||||||||||||||| || ||||||||||| |||||||||| | |    
T  24967056 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgtggtcgcattatcgagtccgtatacatgtccatgaatcatagtcgtgtt 24966957  T
Q  102 gaaat-------gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttga 194  Q
    || ||       ||||||||||||||  ||||||| |||||| ||||||| |||||||||||||||||||  ||||||||||||  ||||||||| ||||    
T  24966956 gagattttatatgatgttttattcatatttgggcttcggcctggcagagagcttttgagatctagtttta--gggcttcggcctggcagagatcttttga 24966859  T
Q  195 gatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacga 271  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  24966858 gatccggatacgatgttttattcgttatagggcttcggcctggcaaagatcttttgagatctagatttgggtgacga 24966782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 210
Target Start/End: Original strand, 20628793 - 20628999
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| || | ||||||||||||||| |||| || | | ||||||||| |||||||||||||||| |||||||||||||||||||||| | |    
T  20628793 atcaatataattgggtatcgtcctatatattgaggttgaaatagtggattgttgtcacattatcgagtccttatacatgtccatgcatcatagtcgtgtt 20628892  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
     | |||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||  |||||||||||||||||  ||||||||| |||||||||||    
T  20628893 aagatgatgatttattcattatagggcttcggcctggcagagatcttttgagatctag--ttatagggcttcggcctggcagagatcttttgagatctgg 20628990  T
Q  202 atacgatgt 210  Q
    |||||||||    
T  20628991 atacgatgt 20628999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 12643424 - 12643518
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12643424 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 12643518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 17397994 - 17398088
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17397994 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 17398088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 11232650 - 11232744
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11232650 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 11232744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 12726811 - 12726717
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12726811 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 12726717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 22514497 - 22514591
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22514497 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 22514591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 23773295 - 23773201
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23773295 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 23773201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 24687066 - 24687160
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24687066 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 24687160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 28777098 - 28777192
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28777098 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 28777192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 34822956 - 34822862
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34822956 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 34822862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 5889694 - 5889789
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5889694 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 5889789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 19888177 - 19888271
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19888177 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagttcttacacatgtccatgcatcatagtcg 19888271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 36892110 - 36892300
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| | |||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||||| | | |    
T  36892110 atcaatataattgggagttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagttgtgtt 36892209  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatc 188  Q
    |       | ||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||   ||||||||||||  ||||||||    
T  36892210 gagattttatatgatgttttattcattattgggctccggcctagcagagatcaattgtgatctagtttt---gggcttcggccttgcagagatc 36892300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 21275924 - 21276020
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21275924 atcaatataattgggtgttgtcctatatattgagtttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 21276020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 8942405 - 8942310
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8942405 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 8942310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 3800510 - 3800603
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagt 95  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3800510 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagt 3800603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 24827967 - 24828064
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  24827967 atcaatataattgggtgttgtcctatatattgaggttgagattgtggattgttgtcgcattatcgagttcttatacatgtccatgcatcatagtcgag 24828064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 12637577 - 12637657
Alignment:
Q  17 gtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12637577 gtgttatcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 12637657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 21140636 - 21140540
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  21140636 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagttcttatacatgttcatgcatcatagtcga 21140540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 14907837 - 14907931
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14907837 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 14907931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 20013880 - 20013786
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20013880 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 20013786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 23818937 - 23818843
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23818937 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 23818843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 15632153 - 15632061
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| ||||||| ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  15632153 caatataattgggtgttgtcctatatattgtgttgagaattgtga-ttgttgtcgcattatcgagtcttattacatgtccatgcatcatagtcg 15632061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 22693028 - 22692952
Alignment:
Q  24 cctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||| |||| | |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  22693028 cctatatattgaggttgaaattgtggattgttgttgcattatcgagtccttatacatgtccatgcatcatagtcgag 22692952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 22697675 - 22697599
Alignment:
Q  24 cctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||| |||| | |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  22697675 cctatatattgaggttgaaattgtggattgttgttgcattatcgagtccttatacatgtccatgcatcatagtcgag 22697599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 25877478 - 25877569
Alignment:
Q  105 atgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||   ||||| ||| ||  ||||||||| |||||||||    
T  25877478 atgatgttttattcattattgggccccgacctagcagagatattttgagatctagtttt---gggctccggtcttgcagagatcttttgagatct 25877569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 269946 - 269849
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| | |||||||||||||||| | ||| | ||| ||||||| |||||||||||||||| |   ||||||||||||||||||||||||    
T  269946 atcaatataattgggagttgtcctatatattgtggtgaaaattgtgaattgtggtcgcattatcgagtcttgttacatgtccatgcatcatagtcgag 269849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 20628950 - 20628993
Alignment:
Q  218 gttatagggcttcggcctggcagagatcttttgagatctggata 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20628950 gttatagggcttcggcctggcagagatcttttgagatctggata 20628993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 22691351 - 22691446
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagat-tgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| | |||||||||||||||| | ||| |  || | |||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  22691351 atcaatataattgggagttgtcctatatattgtggtgaaaactgtggattgttgtcgcattatcgagtctttgtacatgtccatgcatcatagtcg 22691446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 22695998 - 22696093
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagat-tgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| | |||||||||||||||| | ||| |  || | |||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  22695998 atcaatataattgggagttgtcctatatattgtggtgaaaactgtggattgttgtcgcattatcgagtctttgtacatgtccatgcatcatagtcg 22696093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 20628898 - 20628948
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  20628898 gatgatttattcattatagggcttcggcctggcagagatcttttgagatct 20628948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 4449630 - 4449727
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    |||||||||||||   |||||||||||||||| | ||| | ||| ||||||||||||||||||||||||     ||||||||||||||||||||||||    
T  4449630 atcaatataattggaagttgtcctatatattgtggtgaaaattgtgaattgttgtcgcattatcgagtctcgttacatgtccatgcatcatagtcgag 4449727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 25600720 - 25600626
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||||| | |||||||||||||||| | | | | ||| | |||||||||||||||||||||| |   |||||||||||||||||||||    
T  25600720 atcaatataattgggagttgtcctatatattgtggtaaaaattgtggattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 25600626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 22273642 - 22273550
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  22273642 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 22273550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 22862244 - 22862154
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagt 95  Q
    |||||||||||||||||||||||||||||| |  | | |||| | |||||||||||||||||||||| |   |||||||||||||| |||||    
T  22862244 caatataattgagtgttgtcctatatattgtggagaaaattgtg-attgttgtcgcattatcgagtcttgttacatgtccatgcattatagt 22862154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 22282831 - 22282783
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||||||||||||||||| |   ||||||||||||||||||||||    
T  22282831 attgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 22282783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 25877535 - 25877574
Alignment:
Q  123 ttgggctccggcctagcagagatcttttgagatctagttt 162  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  25877535 ttgggctccggtcttgcagagatcttttgagatctagttt 25877574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 721178 - 721134
Alignment:
Q  54 tgtcgcattatcgagtccttac-acatgtccatgcatcatagtcg 97  Q
    ||||||||||||||||| || | ||||||||||||||||||||||    
T  721178 tgtcgcattatcgagtctttgctacatgtccatgcatcatagtcg 721134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 22581374 - 22581430
Alignment:
Q  42 attgagaattgttgtcgcattatcgagtc-cttacacatgtccatgcatcatagtcg 97  Q
    |||| |||||| ||||||||||||||||| ||   ||||||||||||||||||||||    
T  22581374 attgtgaattgatgtcgcattatcgagtctctgttacatgtccatgcatcatagtcg 22581430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 181; Significance: 7e-98; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 24718816 - 24719085
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| || | |||| | ||||||||| |||||||||||||||| |||||||||||||||||||||| | |    
T  24718816 atcaatataattgggtgttgtcctatatattgaggtggaaattgtggattgttgtcacattatcgagtccttatacatgtccatgcatcatagtcgtgtt 24718915  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    || |||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||  ||||||||||||  ||||||||| |||||||||||    
T  24718916 gagatgatgttttattcattattgggctctggcctagcagagatcttttgatgtctagtttta--gggcttcggcctggcagagatcttttgagatctgg 24719013  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24719014 atacgatgttttattcattatagggctttggcctggcagagatcttttgagatctggatatgggtgacgacc 24719085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 22007877 - 22008147
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||| | |    
T  22007877 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgtt 22007976  T
Q  102 gaaat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    || ||  |||||||||||| | || ||||| ||||||  |||||||||||||||||||||||||   || |||||| ||| ||||||||| |||||||||    
T  22007977 gagatacgatgttttattcgtcatagggcttcggcctgacagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatct 22008073  T
Q  200 ggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22008074 ggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 22008147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 13664034 - 13664304
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||| | |    
T  13664034 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgtt 13664133  T
Q  102 gaaat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    || ||  |||||||||||  |||| |||||  ||||| ||||||||||||||||||||||||||   || |||||| ||| ||||||||| ||||||| |    
T  13664134 gagatacgatgttttatttgttatagggctttggcctggcagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatat 13664230  T
Q  200 ggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13664231 ggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 13664304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 13723309 - 13723579
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||| | |    
T  13723309 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgtt 13723408  T
Q  102 gaaat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    || ||  |||||||||||  |||| |||||  ||||| ||||||||||||||||||||||||||   || |||||| ||| ||||||||| ||||||| |    
T  13723409 gagatacgatgttttatttgttatagggctttggcctggcagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatat 13723505  T
Q  200 ggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13723506 ggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 13723579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 3 - 203
Target Start/End: Original strand, 43374980 - 43375179
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43374980 atcaatataattgggtgtcgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagat 43375079  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||| |||||||||||    
T  43375080 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctag--ttatagggcttcggcctggcagagatcttttgagatctgg 43375177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 51 - 273
Target Start/End: Original strand, 24108032 - 24108253
Alignment:
Q  51 tgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaaat--gatgttttattcattattgggctccggcctagcagagatctt 148  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||| | ||| ||  |||||||||||| |||| |||||  ||||| |||||||||||    
T  24108032 tgttgtcgcattatcgagttcttatacatgtccatgcatcatagtcgtgttgagatacgatgttttattcgttatagggctttggcctggcagagatctt 24108131  T
Q  149 ttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttt 248  Q
    |||||||||||||||   || |||||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24108132 ttgagatctagtttt---ggacttcggtctagcagagatcttttgagatctggatacgatgttttgttcgttatagggcttcggcctggcagagatcttt 24108228  T
Q  249 tgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||||||||||||    
T  24108229 tgagatctggatatgggtgacgacc 24108253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 22908885 - 22909139
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||||||  | |||||||||||||||||||| | |||    
T  22908885 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtccttgtatatgtccatgcatcatagtcgtgttga 22908983  T
Q  104 aat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
     ||  |||||||||||| |||| ||| | ||| || |||||||||||||||||| |||||||   || |||||| ||| ||||||||| |||||||||||    
T  22908984 gatacgatgttttattcgttatagggattcggtctggcagagatcttttgagatttagtttt---ggacttcggtctagcagagatcttttgagatctgg 22909080  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22909081 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 22909139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 6775630 - 6775779
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  6775630 atcaatataattgggtgtcgtcctatatattgaggttgagattgtgaattgttgttgcattatcgagtccttatacatgtccatgcatcatagtcgagat 6775729  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttg 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6775730 gaaatgatgttttattcattattgggctccggcctagcagagatcttttg 6775779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 16675724 - 16675818
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16675724 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 16675818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 21845889 - 21845983
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21845889 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 21845983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 24547979 - 24547883
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24547979 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 24547883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 272601 - 272695
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  272601 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 272695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 643248 - 643154
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  643248 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 643154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 829054 - 828960
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  829054 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 828960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 21853294 - 21853388
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  21853294 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgctgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 21853388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 22089841 - 22089935
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22089841 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 22089935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 3432974 - 3433068
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3432974 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 3433068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 15320457 - 15320551
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15320457 atcaatacaattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 15320551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 15500826 - 15500920
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15500826 atcaatacaattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 15500920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 224560 - 224655
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  224560 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 224655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 700973 - 701068
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  700973 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 701068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 738183 - 738278
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  738183 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 738278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 862078 - 862173
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  862078 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 862173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 20480429 - 20480267
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaa 104  Q
    ||||||||||  |||||||||||||||||| | ||| | || || ||||||||||||||||||||| |   |||||||||||||||||||||| | |||     
T  20480429 caatataattaggtgttgtcctatatattgtggtgaaaatgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgtgttgag 20480331  T
Q  105 at-------gatgttttattcattattgggctccggcctagcagagatcttttgagatctagtt 161  Q
    ||       |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20480330 attttatatgatgttttattcattattgggctccggccttgcagagatcttttgagatctagtt 20480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 25121302 - 25121111
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    |||||||||||||   |||||||||||||||||| ||| | ||| | |||||||||||||||| ||||||||  |||||| ||||||||||||||| | |    
T  25121302 atcaatataattggaagttgtcctatatattgaggtgaaaattgtggattgttgtcgcattattgagtccttgtacatgttcatgcatcatagtcgtgtt 25121203  T
Q  102 gaaat-------gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatc 188  Q
    || ||       ||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||  | ||||||||||||  ||||||||    
T  25121202 gagattttatatgatgttttattcattattgggcttcggcctagcagagatcatttgtgatctagttt--ttgggcttcggccttacagagatc 25121111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 16417020 - 16416854
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg---- 97  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | ||  ||||| |||||||||||| ||  ||||||||||||||||||||||        
T  16417020 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggataattgtcacattatcgagtctttgtacatgtccatgcatcatagtcgtgtg 16416921  T
Q  98 -agatg--aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtt 161  Q
     ||||   | |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  16416920 gagattttatatgatgttttattcattattggcctccggccttgcagagatcttttgagatctagtt 16416854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 22322834 - 22323000
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattga-gaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||| ||||||||||||||| ||| | | | | ||| ||||||||||||| |||||||  |||||||||||||||||||||| | |    
T  22322834 atcaatataattgggtgtcgtcctatatattgaggtgaaaattatggattattgtcgcattatcaagtccttgtacatgtccatgcatcatagtcgtgtt 22322933  T
Q  102 gaaat-------gatgttttattcattattgggctccggcctagcagagatcttttgagatctagtt 161  Q
     ||||       |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  22322934 aaaattttatatgatgttttattcattattgggctccggccttgcatagatctttttagatctagtt 22323000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 5236953 - 5236859
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5236953 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 5236859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 16874336 - 16874431
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16874336 atcaatataattgggtgtcgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 16874431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 24662645 - 24662739
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24662645 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 24662739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 43684412 - 43684318
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43684412 atcaatataattgggtgttgtcctatatattgagtttgaaatggtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 43684318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 19994551 - 19994700
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||| ||| |||||||||||||||||||| ||| | ||| | |||||||||||||||| ||||||||  |||||||||||||| ||||||| | |    
T  19994551 atcaatatagttgtgtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattattgagtccttgtacatgtccatgcattatagtcgggtt 19994650  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagaga 144  Q
    |       | |||||||||||||||| ||||||||| |||||||||||||    
T  19994651 gagattttatatgatgttttattcataattgggctcaggcctagcagaga 19994700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 20480308 - 20480214
Alignment:
Q  162 ttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||| ||||| ||||||  ||||||||| ||||||||| | |||||||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  20480308 ttattgggctccggccttgcagagatcttttgagatctagttacgatgttttattcgttattgggcttcggccttgcagagattttttgagatct 20480214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 41245423 - 41245319
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| | || ||||||||||||||| ||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||||||| | |    
T  41245423 atcaatataattgggagtagtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 41245324  T
Q  102 gaaat 106  Q
    |||||    
T  41245323 gaaat 41245319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 273
Target Start/End: Original strand, 43375137 - 43375192
Alignment:
Q  218 gttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  43375137 gttatagggcttcggcctggcagagatcttttgagatctggatttgggcgacgacc 43375192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 24930516 - 24930605
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcata 93  Q
    ||||||||||| |||||||||||||||||||| || | |||| | |||||||||||||||||||||| |   ||||||||||||||||||    
T  24930516 caatataattgggtgttgtcctatatattgaggtggaaattgtggattgttgtcgcattatcgagtcttgttacatgtccatgcatcata 24930605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 20655423 - 20655518
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| | |||||||||||||||| | ||| | ||| |||||| ||||||||||||||||| |   ||||||||||||||||||||||    
T  20655423 atcaatataattgggagttgtcctatatattgtggtgaaaattgtgaattgatgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 20655518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 20648838 - 20648932
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||||| | ||||| |||||||||| | ||| | ||| |||||||||||||||||||||||| |   |||||||||||||||||||||    
T  20648838 atcaatataattgggagttgttctatatattgtggtgaaaattgtgaattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 20648932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 20568666 - 20568836
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcata------gt 95  Q
    ||||||||||||| | |||||||||||||||| | ||| | ||| | |||||||||||||||||||||| |   ||||||||||||||||||      ||    
T  20568666 atcaatataattgggagttgtcctatatattgtggtgaaaattgtggattgttgtcgcattatcgagtcttgttacatgtccatgcatcataagtcgtgt 20568765  T
Q  96 cgaga--tgaaatgatgtttt--attcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
     ||||  ||| ||||||||||   | ||| ||||||||||||||||||||||||| || | ||||||||||    
T  20568766 tgagatttgatatgatgtttttgttgcatcattgggctccggcctagcagagatcattggtgatctagttt 20568836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 20574859 - 20575029
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcata------gt 95  Q
    ||||||||||||| | |||||||||||||||| | ||| | ||| | |||||||||||||||||||||| |   ||||||||||||||||||      ||    
T  20574859 atcaatataattgggagttgtcctatatattgtggtgaaaattgtggattgttgtcgcattatcgagtcttgttacatgtccatgcatcataagtcgtgt 20574958  T
Q  96 cgaga--tgaaatgatgtttt--attcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
     ||||  ||| ||||||||||   | ||| ||||||||||||||||||||||||| || | ||||||||||    
T  20574959 tgagatttgatatgatgtttttgttgcatcattgggctccggcctagcagagatcattggtgatctagttt 20575029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 37605750 - 37605658
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| | ||| | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  37605750 caatataattgggtgttgtcctatatattgtggtgaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 37605658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 37610124 - 37610032
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| | ||| | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  37610124 caatataattgggtgttgtcctatatattgtggtgaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 37610032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 20480264 - 20480210
Alignment:
Q  107 gatgttttattcattattgggctccggcctagcagagatcttttgagatctagtt 161  Q
    |||||||||||| |||||||||| |||||| |||||||| |||||||||||||||    
T  20480264 gatgttttattcgttattgggcttcggccttgcagagattttttgagatctagtt 20480210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 270494 - 270402
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  270494 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 270402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 645426 - 645518
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  645426 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 645518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 831161 - 831253
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  831161 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 831253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 16203739 - 16203831
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  16203739 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttattacatgtccatgcatcatagtcg 16203831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 24387110 - 24387202
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  24387110 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 24387202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 22323003 - 22323058
Alignment:
Q  107 gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    |||||||||||| |||||| |||||| ||||| |||||| ||||||||||||||||    
T  22323003 gatgttttattccttattgtgctccgacctagtagagatattttgagatctagttt 22323058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 20480321 - 20480271
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  20480321 gatgttttattcattattgggctccggccttgcagagatcttttgagatct 20480271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 43375085 - 43375135
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  43375085 gatgttttattcattattgggctccggcctagcagagatcttttgagatct 43375135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 28543656 - 28543601
Alignment:
Q  42 attgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||| |||||| ||||||||||||||||| |   ||||||||||||||||||||||    
T  28543656 attgtgaattgatgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 28543601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 16416908 - 16416858
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| || || |||||| ||||||||||||||||||||    
T  16416908 gatgttttattcattattggcctccggccttgcagagatcttttgagatct 16416858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 25121190 - 25121140
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| |||||||||||| ||||||||| |||| |||||    
T  25121190 gatgttttattcattattgggcttcggcctagcagagatcatttgtgatct 25121140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 6775735 - 6775779
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttg 250  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||    
T  6775735 gatgttttattcattattgggctccggcctagcagagatcttttg 6775779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 29759005 - 29758957
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||||||||||||||||| |   |||||| |||||||||||||||    
T  29759005 attgttgtcgcattatcgagtcttgttacatgttcatgcatcatagtcg 29758957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 15860546 - 15860816
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||| | |    
T  15860546 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgtt 15860645  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||  ||| ||||||||||||||  ||||||||| |||||||||||    
T  15860646 gagatgatgatttattcattattgggcttcggcctagcagagatcttttgagatcta--tttttagggcttcggcctggcagagatcttttgagatctgg 15860743  T
Q  202 atacgatgtttta-ttcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  15860744 atacgatgtttgatttcgttatagggcttcggcctggcagagatattttgagatctggatttgggtgacgacc 15860816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 19572171 - 19572438
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | ||||||||| |||||||||||||||| |||||||||||||||||||||| | |    
T  19572171 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcacattatcgagtccttatacatgtccatgcatcatagtcgtgtt 19572270  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||| ||||||||| |    
T  19572271 gagatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtttt---gggcttcggcctagcagagatcttttgagatctag 19572367  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
     |  ||||||||||||||||| |||||||||||| |||||||||  ||| ||||||||||||||||||||||    
T  19572368 ttttgatgttttattcgttattgggcttcggcctagcagagatc-cttgggatctggatatgggtgacgacc 19572438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 25057603 - 25057336
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||||||  |||||||||||||||||||||| | |||    
T  25057603 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgttga 25057505  T
Q  104 aat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
     ||  |||||||||||| | || ||||| | |||| ||||||||||||||||||||||||||   || |||||| ||| ||||||||| |||||||||||    
T  25057504 gatacgatgttttattcgtcatagggcttcagcctggcagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatctgg 25057408  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25057407 atacgatgttttattcattatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 25057336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 194
Target Start/End: Complemental strand, 13816271 - 13816082
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||||| |||||| ||||||||||||||| | |    
T  13816271 atcaatataattgggtgttgtcctatatattgaggtgagaattgtggattgttgtcgcattatcgagtccttatacatgttcatgcatcatagtcgtgtt 13816172  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttga 194  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||| ||||||||| ||||    
T  13816171 gagatgatgttttattcattattgggctccggcctagcagagatcttttgaggtctagtttt---gggcttcggcctagcagagatcttttga 13816082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 17957737 - 17958004
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||| ||||||||||||| |  || | ||| || ||||||||||||||||||||| |   |||||||||||||||||||||  | |||    
T  17957737 caatataattgggtgtcgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcatgttga 17957835  T
Q  104 aatg--atgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
     ||   ||||||||||| |||| ||||| ||||||  |||||||||||||||||||||||||   || |||||| ||| ||||||||| |||||||||||    
T  17957836 gatacaatgttttattcgttatagggcttcggcctgacagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatctgg 17957932  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  17957933 atacgatgttttattcgttatagggcttctgcctggcagagatctattgagatctggatataggtgacgacc 17958004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 164 - 273
Target Start/End: Complemental strand, 11813504 - 11813395
Alignment:
Q  164 atagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatg 263  Q
    |||||||||||||||  || |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11813504 atagggcttcggcctgacatagatcttttgagatcaggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatg 11813405  T
Q  264 ggtgacgacc 273  Q
    ||||||||||    
T  11813404 ggtgacgacc 11813395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 18909448 - 18909354
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18909448 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 18909354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 53769417 - 53769323
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  53769417 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 53769323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 55315152 - 55315058
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  55315152 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 55315058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 15574800 - 15574704
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15574800 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 15574704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 1469051 - 1469145
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1469051 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 1469145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 8269800 - 8269894
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8269800 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 8269894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 8276911 - 8277005
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8276911 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 8277005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 8305720 - 8305814
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8305720 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 8305814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 30152093 - 30151999
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30152093 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 30151999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 45859776 - 45859682
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45859776 atcaatataattggatgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 45859682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 15613816 - 15613723
Alignment:
Q  6 aatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15613816 aatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 15613723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 27839465 - 27839370
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27839465 atcaatataattgggtgttgtcctatatattgaggttgagattgtgaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 27839370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 44228185 - 44228090
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44228185 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 44228090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 2450725 - 2450819
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2450725 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagttcttacacatgtccatgcatcatagtcg 2450819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 16819667 - 16819573
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  16819667 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgttcatgcatcatagtcg 16819573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 22273803 - 22273709
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22273803 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagttcttacacatgtccatgcatcatagtcg 22273709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 41268998 - 41268904
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  41268998 atcaatataattgggtgttgtcctatgtattgagttgagattgagaaatgttgtcgcattatcgagtcattacacatgtccatgcatcatagtcg 41268904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 30205212 - 30205045
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg---- 97  Q
    ||||||||||||| ||||||||| ||||||| || ||| | ||| | |||||||||||||||||||||||||  ||||||||||||||||||||||        
T  30205212 atcaatataattgggtgttgtccaatatattcaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 30205113  T
Q  98 -aga--tgaaatgatgttttattcattattgggctccggcctagcagagatc-ttttgagatctagtt 161  Q
     |||  | | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30205112 cagattttacatgatgttttattcattattgggctccggcctagcagagatctttttgagatctagtt 30205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 181 - 260
Target Start/End: Complemental strand, 30141542 - 30141463
Alignment:
Q  181 cagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 260  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30141542 cagagatcttttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 30141463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 49230972 - 49230877
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49230972 atcaatataattgggtgttgtcctatatattgagattgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 49230877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 13977032 - 13977126
Alignment:
Q  3 atcaatataattgagtgttgtcctata--tattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagt 95  Q
    ||||||||||||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13977032 atcaatataattgggtgttgtcctatatatattgagttgacattgagaattgttgtcgcattatcgagtcgttacacatgtccatgcatcatagt 13977126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 13956200 - 13956296
Alignment:
Q  3 atcaatataattgagtgttgtcctata--tattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||| ||||||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13956200 atcaaaataattgggtgttgtcctatatatattgagttgacattgagaattgttgtcgcattatcgagtcgttacacatgtccatgcatcatagtcg 13956296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 14846060 - 14846157
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||| || | |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14846060 atcaatataattgggtgttgtcctatatattgaggttaaaattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgag 14846157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 17099472 - 17099321
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | |||| || |||||||||||||||||  |||||||||||||||||||||| | |    
T  17099472 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgctgacgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 17099373  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatc 146  Q
    |       | ||||||||||||||||||||||||||||||||||||||||||    
T  17099372 gagattttatatgatgttttattcattattgggctccggcctagcagagatc 17099321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 12265889 - 12265985
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  12265889 atcaatataattgggtgtcgtcctatatattgagtttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgaatcatagtcga 12265985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 11813577 - 11813470
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaaatgatgttttattcattattgggctccggcctagcagagatctt 148  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||| || ||||| ||||||  || |||||||    
T  11813577 attgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgttgagatgatgttttattcatcatagggcttcggcctgacatagatctt 11813478  T
Q  149 ttgagatc 156  Q
    ||||||||    
T  11813477 ttgagatc 11813470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 16183410 - 16183580
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgag------attgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||||| ||||||||||||||||||| |||||      |||| | |||||||||||||||||||||||||  |||||||||||||||||||||    
T  16183410 atcaatataattgggtgttgtcctatatattga-ttgaggtgtaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtc 16183508  T
Q  97 gagatg-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtt 161  Q
    | | ||       | |||||||||||||||| |||| |||||||||||||||||||| |||| |||||||||    
T  16183509 gggttgagattttatatgatgttttattcataattgtgctccggcctagcagagatcatttgtgatctagtt 16183580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 15469866 - 15469961
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||||||| |||| || || ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  15469866 atcaatataattgggtgttgtcctatatattgagttgaaattgtga-ttattgtcgcattatcgagttcttatacatgtccatgcatcatagtcgag 15469961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 16745569 - 16745663
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || |||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  16745569 atcaatataattgggtgttgtcctatatattgagtttgaaattgtga-tggttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 16745663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 18905197 - 18905293
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| || ||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  18905197 atcaatataattgggtgttgtcctatatattgaggttgaaattgtga-ttgttttcgcattattgagtccttatacatgtccatgcatcatagtcgag 18905293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 15939859 - 15939954
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||| |||| |||||| |||| |||| |||||||||||||||||| ||||||||| ||||| ||||||||||||||||    
T  15939859 atcaatataattgggtgttgtcatatacattgaggttgaaattgtgaattgttgtcgcattattgagtccttatacatgcccatgcatcatagtcg 15939954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 22145673 - 22145838
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||| ||||||||||||||| ||| | ||| | |||||| ||||||||||||||| |   |||||||||||||||||||||| | |    
T  22145673 atcaatataattgggtgt-gtcctatatattgaggtgaaaattgtggattgttatcgcattatcgagtcttgttacatgtccatgcatcatagtcgtgtt 22145771  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    |       | ||||||||||||||| ||||||||| |  |||||||||||||||||||||||||||||    
T  22145772 gagattttatatgatgttttattca-tattgggcttcaacctagcagagatcttttgagatctagttt 22145838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 50113543 - 50113622
Alignment:
Q  18 tgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||||||||| ||| |||| | |||||||| ||||||||||||||||  ||||| ||||||||||||||||    
T  50113543 tgttgtcctatatattgaggtgaaattgtggattgttgttgcattatcgagtccttgtacatgcccatgcatcatagtcg 50113622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 14297256 - 14297159
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| | |||||||||||||||| | ||| | ||| |||||||||||||||||| ||||| |   ||||||||||||||||||||||||    
T  14297256 atcaatataattgggagttgtcctatatattgtggtgaaaattgtgaattgttgtcgcattattgagtcttgttacatgtccatgcatcatagtcgag 14297159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 14302883 - 14302786
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| | |||||||||||||||| | ||| | ||| |||||||||||||||||| ||||| |   ||||||||||||||||||||||||    
T  14302883 atcaatataattgggagttgtcctatatattgtggtgaaaattgtgaattgttgtcgcattattgagtcttgttacatgtccatgcatcatagtcgag 14302786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 35122445 - 35122348
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattga-gaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| | |||||||||||||||| | ||| | | | |||||||||||||||||||||||| |   ||||||||||||||||||||||||    
T  35122445 atcaatataattgggagttgtcctatatattgtggtgaaaattatgaattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgag 35122348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 6148241 - 6148312
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtcctt 73  Q
    ||||||||||||| ||||||||||| |||||||| || | |||| | |||||||||||||||||||||||||    
T  6148241 atcaatataattgggtgttgtcctacatattgaggtgaaaattgtggattgttgtcgcattatcgagtcctt 6148312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 16259797 - 16259703
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||||    
T  16259797 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgag 16259703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 17523809 - 17523904
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagatt-gagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| | |||||||||||||||| | ||| |   | | |||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  17523809 atcaatataattgggagttgtcctatatattggggtgaaaaccgtggattgttgtcgcattatcgagtctttgtacatgtccatgcatcatagtcg 17523904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 19230816 - 19230726
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagt 95  Q
    ||||||||||| |||||||||||||||||| | ||| | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||    
T  19230816 caatataattgggtgttgtcctatatattgtggtgaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagt 19230726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 2048816 - 2048724
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  2048816 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 2048724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 7852564 - 7852472
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  7852564 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 7852472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 53899921 - 53900018
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| | ||||||||||||| || | ||| | ||| |||||||||||||||||| ||||| |   |||||| |||||||||||||||||    
T  53899921 atcaatataattgggagttgtcctatataatgtggtgaaaattgtgaattgttgtcgcattattgagtcttgttacatgttcatgcatcatagtcgag 53900018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 11813519 - 11813464
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggata 261  Q
    |||||||||||| | |||||||||||||||| || ||||||||||||||| |||||    
T  11813519 gatgttttattcatcatagggcttcggcctgacatagatcttttgagatcaggata 11813464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 11813462 - 11813412
Alignment:
Q  107 gatgttttattcattattgggctccggcctagcagagatcttttgagatct 157  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  11813462 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 11813412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 30141517 - 30141467
Alignment:
Q  107 gatgttttattcattattgggctccggcctagcagagatcttttgagatct 157  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  30141517 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 30141467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 5227471 - 5227379
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||| ||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  5227471 caatataattgggtgtcgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 5227379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 6148317 - 6148374
Alignment:
Q  105 atgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    ||||||||||||||||  |||||||||| ||||||||||||| || | ||||||||||    
T  6148317 atgatgttttattcatatttgggctccgacctagcagagatcattggtgatctagttt 6148374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 19945382 - 19945290
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||| ||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  19945382 caatataattgggtgtcgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 19945290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 33340599 - 33340507
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   |||||| |||||||||||||||    
T  33340599 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtacatgcatcatagtcg 33340507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 51159880 - 51159972
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||| ||||||||||||||||| |   ||||||||||||||||||||||    
T  51159880 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttggtgtcgcattatcgagtcttattacatgtccatgcatcatagtcg 51159972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 10737268 - 10737220
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||||||||||||||||| |   ||||||||||||||||||||||    
T  10737268 attgttgtcgcattatcgagtcttgtgacatgtccatgcatcatagtcg 10737220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 17138225 - 17138129
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttac-acatgtccatgcatcatagtcg 97  Q
    ||||||||| ||| | |||||||| ||||||||| ||| | |||  || || ||||||||||||||||| |||  ||||||||||||||||||||||    
T  17138225 atcaatatagttgggagttgtcctttatattgaggtgaaaattgtaaagtgatgtcgcattatcgagtctttattacatgtccatgcatcatagtcg 17138129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 47786318 - 47786365
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    |||||||||||||||||||||| |   |||||||||||||||||||||    
T  47786318 attgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 47786365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 13816166 - 13816120
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgag 252  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||    
T  13816166 gatgttttattcattattgggctccggcctagcagagatcttttgag 13816120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 40938443 - 40938295
Alignment:
Q  48 aattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc-----gaga-tgaaatgatgtttt--attcattattgggctccggcctagc 139  Q
    ||||| ||||||||||||||||| |   |||||||||||||||||||||     |||| ||| ||||||||||   | ||| ||||||||||| ||||||    
T  40938443 aattggtgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgtgttgagattgatatgatgtttttgttgcatcattgggctccgacctagc 40938344  T
Q  140 agagatc-ttttgagatctagttttatagggcttcggcctatcagagatc 188  Q
    ||||||| ||| | ||||||||||| | || |||||| || |||||||||    
T  40938343 agagatcatttagtgatctagttttgt-ggacttcggtctttcagagatc 40938295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 319016 - 319108
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| ||||| |||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||| ||||||||||    
T  319016 caatataattgggtgttatcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgtatcatagtcg 319108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 23491262 - 23491170
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| ||||| |||||||||||| |  || | ||| || |||||||||||||||| |||  ||  ||||||||||||||||||||||    
T  23491262 caatataattgggtgttttcctatatattgtggagaaaattgtga-ttgttgtcgcattatctagtttttttacatgtccatgcatcatagtcg 23491170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 30141504 - 30141463
Alignment:
Q  162 ttatagggcttcggcctatcagagatctgttgagatctggat 203  Q
    |||||||||||||||||  ||||||||| |||||||||||||    
T  30141504 ttatagggcttcggcctggcagagatcttttgagatctggat 30141463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 11883719 - 11883763
Alignment:
Q  54 tgtcgcattatcgagtccttac-acatgtccatgcatcatagtcg 97  Q
    ||||||||||||||||| || | ||||||||||||||||||||||    
T  11883719 tgtcgcattatcgagtctttgctacatgtccatgcatcatagtcg 11883763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 12951759 - 12951715
Alignment:
Q  54 tgtcgcattatcgagtccttac-acatgtccatgcatcatagtcg 97  Q
    ||||||||||||||||| || | ||||||||||||||||||||||    
T  12951759 tgtcgcattatcgagtctttgctacatgtccatgcatcatagtcg 12951715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 14522747 - 14522803
Alignment:
Q  42 attgagaattgttgtcgcattatcgagtc-cttacacatgtccatgcatcatagtcg 97  Q
    |||| |||||| ||||||||||||||||| ||   ||||||||||||||||||||||    
T  14522747 attgtgaattgatgtcgcattatcgagtctctgttacatgtccatgcatcatagtcg 14522803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 27912 - 28180
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||| | ||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  27912 atcaatataattgggtgtcgtcctatatattgaggttgaaattgtggattgttgtcccattatcgagtccttatacatgtccatgcatcatagtcgagat 28011  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    ||||||||| |||||||||||| ||||| |||| | | ||||||||||||||||||||||  |||||||||||||||  ||||||||| |||||||||||    
T  28012 gaaatgatgatttattcattat-gggcttcggcttggaagagatcttttgagatctagtt--atagggcttcggcctggcagagatcttttgagatctgg 28108  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  28109 atacgatgttttattcgttatagggcttcagcctggcagagatcttttgagatctggatttgggtgacgacc 28180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 15263 - 15539
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||||||| | |    
T  15263 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 15362  T
Q  102 gaaat-------gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttga 194  Q
    || ||       |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||  ||||||||| ||||    
T  15363 gagattttatatgatgttttattcattattgggctccggcctagcagagatcatttgagatctagtttta--gggcttcggcctggcagagatcttttga 15460  T
Q  195 gatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15461 gatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatttgggtgacgacc 15539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 3 - 269
Target Start/End: Original strand, 6549 - 6813
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| | || ||||||||||||||| |||| |||| | ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6549 atcaatataattgggcgtcgtcctatatattgaggttgaaattgtggattattgtcgcattatcgagtccttatacatgtccatgcatcatagtcgagat 6648  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
    ||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||| |  ||||||||| |||||||||||    
T  6649 gaaatgatgatttattcattat-gggcttcggcctagcagagatcttttgagatctagtt--atagggcttcggcttggcagagatcttttgagatctgg 6745  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgac 269  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  6746 atacgatgttttattcgttatagggcttcggcctgacagagatcttttgagatttggatttgggtgac 6813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2147 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold2147
Description:

Target: scaffold2147; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 49 - 273
Target Start/End: Complemental strand, 1015 - 794
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaaatgatgttttattcattattgggctccggcctagcagagatctt 148  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  1015 attgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgttgagatgatgttttattcattattgggctctggcctagcagagatctt 916  T
Q  149 ttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttt 248  Q
    |||||||||||||||   |||||||| ||||  ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  915 ttgagatctagtttt---gggcttcgtcctagtagacatcttttgagatctagatacgatgttttattcgttatagggcttcggcctggcagagatcttt 819  T
Q  249 tgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||||||||||||    
T  818 tgagatctggatatgggtgacgacc 794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 49 - 273
Target Start/End: Original strand, 20692 - 20914
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaaatgatgttttattcattattgggctccggcctagcagagatctt 148  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  20692 attgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgttgagatgatgttttattcattattgggctctggcctagcagagatctt 20791  T
Q  149 ttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttt 248  Q
    ||||  ||||||||  ||||||||||||||  ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  20792 ttgatgtctagttt--tagggcttcggcctggcagagatcttttgagatctggatacgatgttttattcattatagggcttcggcctgacagagatcttt 20889  T
Q  249 tgagatctggatatgggtgacgacc 273  Q
    ||||||| |||||||||||||||||    
T  20890 tgagatcaggatatgggtgacgacc 20914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 5 - 269
Target Start/End: Complemental strand, 40356 - 40094
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| || ||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   |||||||||||||||||||||| |||||    
T  40356 caatataattgggttttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgtgatga 40258  T
Q  104 aatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggat 203  Q
     |||||||||||||||||||  ||||  ||||||| |||||||||||||| ||| |||  |||||||||||||||  ||||||||| |||||||||||||    
T  40257 gatgatgttttattcattatatggctttggcctagtagagatcttttgaggtctggtt--atagggcttcggcctggcagagatcttttgagatctggat 40160  T
Q  204 acgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgac 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40159 acgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgac 40094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 18981 - 19238
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||||||||||||||||| |  || | ||| | |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||    
T  18981 caatataattgggtgttgtcctatatattgtggagaaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgtatcataatcgagatga 19080  T
Q  104 aatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggat 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||  ||          ||||||| |||    
T  19081 aatgatgttttattcattattgggctccggcctagcagagatcttttgaggtctagttt--tagggcttcggcctggca----------gagatctagat 19168  T
Q  204 acgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| || |||||||||    
T  19169 acgatgttttattcgttatagggtttcggccttgcagagatcttttgagatctggatttgagtgacgacc 19238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 260
Target Start/End: Complemental strand, 34109 - 33855
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||||||||||||||||  |  || | ||| || ||||||||||||||||||||||||  |||||| ||||||||||||||| | |||    
T  34109 caatataattgggtgttgtcctatatattatggagaaaattgtga-ttgttgtcgcattatcgagtccttgtacatgttcatgcatcatagtcgtgttga 34011  T
Q  104 aat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
     ||  |||||||||||| |||| ||||| ||| || ||||||||||||||||||||||||||   || |||||| ||| ||||||||| |||||||||||    
T  34010 catacgatgttttattcgttatagggcttcggtctggcagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatctgg 33914  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33913 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 33855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 32595 - 32687
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||||||  ||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  32595 caatataattggctgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgctacatgtccatgcatcatagtcg 32687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 38735 - 38989
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||||||||||||||||  |  || | ||| || ||||||||||||||||||||||||  |||||| ||||||||||||||| | |||    
T  38735 caatataattgggtgttgtcctatatattatggagaaaattgtga-ttgttgtcgcattatcgagtccttgtacatgttcatgcatcatagtcgtgttga 38833  T
Q  104 aat--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgg 201  Q
     ||  |||||||||||| |||| ||||| ||| || ||||||||||||||||||||||||||   || |||||| ||| ||||||||| |||||||||||    
T  38834 catacgatgttttattcgttatagggcttcggtctggcagagatcttttgagatctagtttt---ggacttcggtctagcagagatcttttgagatctgg 38930  T
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38931 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 38989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 40249 - 40157
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||||||  ||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  40249 caatataattggctgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgctacatgtccatgcatcatagtcg 40157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 5 - 260
Target Start/End: Complemental strand, 17405 - 17151
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaa 104  Q
    ||||||||||| |||| ||||||||||||| |  || | |  | |||||||||||||||||||||| |   |||||||||||||||||||||  | ||||    
T  17405 caatataattgggtgtcgtcctatatattgtggagaaaattgggattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcatgttgaa 17306  T
Q  105 at--gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctgga 202  Q
    ||  |||||||||||| ||||  |||| |||||| |||||||||||||||||| |||||||  |   |||||| ||| ||||||||| ||||||||||||    
T  17305 atacgatgttttattcgttatacggcttcggcctggcagagatcttttgagatttagttttgaa---cttcggtctagcagagatcttttgagatctgga 17209  T
Q  203 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17208 tacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggat 17151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 120; Significance: 2e-61; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 107 - 273
Target Start/End: Original strand, 90444 - 90608
Alignment:
Q  107 gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacg 206  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||||||  |||||||||||||||  ||||||||| ||||||||||||||||    
T  90444 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatctagtt--atagggcttcggcctggcagagatcttttgagatctggatacg 90541  T
Q  207 atgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  90542 atattttattcgttatagggcttcggcctggcagagatcttttgagatatggatatgggtgacgacc 90608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 129146 - 129050
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| |||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  129146 atcaatataattgggtgttgtcctatatattgagtttgagattgttaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 129050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 164 - 256
Target Start/End: Original strand, 90402 - 90494
Alignment:
Q  164 atagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    ||||||||||| | || || |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  90402 atagggcttcgtcatagcaaagatcttttgagacctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 90494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 90285 - 90434
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattga-gttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| ||||||||||||||||||| ||||| |||| | |   |||||||||||||||||||||| |||||||||||||||||||||  |      
T  90285 atcaatataattgggtgttgtcctatatattgaggttgaaattgtgga---ttgtcgcattatcgagtccttatacatgtccatgcatcatagtcttgta 90381  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgaga 154  Q
     |||||||||||| ||||| || ||||| || | ||||| |||||||||||||    
T  90382 taaatgatgttttgttcatcatagggcttcgtcatagcaaagatcttttgaga 90434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 115; Significance: 2e-58; HSPs: 14)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 124691 - 124886
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | ||||||||| |||||||||||||||| |||||||||||||||||||||| | |    
T  124691 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcacattatcgagtccttatacatgtccatgcatcatagtcgtgtt 124790  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    || |||||| |||||||||||| ||||| |||||| |||||||||||||||| ||||||||  ||||||||||||||| ||||||||| |||||||||    
T  124791 gagatgatgatttattcattatagggcttcggcctggcagagatcttttgaggtctagttt--tagggcttcggcctagcagagatcttttgagatct 124886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 193374 - 193181
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||| | |    
T  193374 atcaatataattgggtgtcgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgtt 193275  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatc 198  Q
     |||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||  ||||||||| ||||||||    
T  193274 caaatgat-atttattcattattgggcttcggcctagcagagatcttttgaggtctagttt--tagggcttcggcctggcagagatcttttgagatc 193181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 76092 - 76285
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| ||||  |||||||||||||| |||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||  | |    
T  76092 atcaatataattgggtgtcatcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcatgtt 76191  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatc 198  Q
     |||||||  |||||||||||||||||| || |||||||||||||||||||| ||||||||  ||||||||||||||  ||||||||| ||||||||    
T  76192 caaatgat-atttattcattattgggcttcgtcctagcagagatcttttgaggtctagttt--tagggcttcggcctggcagagatcttttgagatc 76285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 125 - 273
Target Start/End: Original strand, 124854 - 125001
Alignment:
Q  125 gggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttatt-cgttata 223  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||||||| ||   |||||||| ||||||||| |||||||||||| ||| |||||||    
T  124854 gggcttcggcctagcagagatcttttgagatctagtt--atagggcttcggtctggtagagatcttttgagatctagatacgatgtttgatttcgttata 124951  T
Q  224 gggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  124952 gggcttcggcctggcagagatcttttgagatctggttatgggtgacgacc 125001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 256309 - 256476
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||||||| | |    
T  256309 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 256408  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    |       | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  256409 gagattttatatgatgttttattcattattgggctctggcctagcagagatcttttgagatctagttt 256476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 125 - 273
Target Start/End: Complemental strand, 193212 - 193065
Alignment:
Q  125 gggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttatt-cgttata 223  Q
    ||||| |||||| ||||||||||||||||||| ||||  |||||||||||||||  ||||||||| |||||||||  ||||||||||| ||| |||||||    
T  193212 gggcttcggcctggcagagatcttttgagatcaagtt--atagggcttcggcctggcagagatcttttgagatctatatacgatgtttgatttcgttata 193115  T
Q  224 gggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  193114 gggcttcggcctggcaaagatcttttgagatctggatttgggtgacgacc 193065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 125 - 273
Target Start/End: Original strand, 76254 - 76401
Alignment:
Q  125 gggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttatt-cgttata 223  Q
    ||||| |||||| ||||||||||||||||||| ||||  |||||||||||||||  ||||||||| ||||||||| |||||||||||| ||| |||||||    
T  76254 gggcttcggcctggcagagatcttttgagatcaagtt--atagggcttcggcctggcagagatcttttgagatctagatacgatgtttgatttcgttata 76351  T
Q  224 gggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||| | |||||||||||||||||||||||||| || |||||||||    
T  76352 gggcttcgacttggcagagatcttttgagatctggatttgcgtgacgacc 76401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 124796 - 124842
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgag 252  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  124796 gatgatttattcattatagggcttcggcctggcagagatcttttgag 124842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 255
Target Start/End: Original strand, 76252 - 76285
Alignment:
Q  222 tagggcttcggcctggcagagatcttttgagatc 255  Q
    ||||||||||||||||||||||||||||||||||    
T  76252 tagggcttcggcctggcagagatcttttgagatc 76285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 255
Target Start/End: Complemental strand, 193214 - 193181
Alignment:
Q  222 tagggcttcggcctggcagagatcttttgagatc 255  Q
    ||||||||||||||||||||||||||||||||||    
T  193214 tagggcttcggcctggcagagatcttttgagatc 193181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 262915 - 262975
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcatt 62  Q
    ||||||||||||| |||||||||||||||||||| || | |||| | ||||||||||||||    
T  262915 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcatt 262975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 124852 - 124886
Alignment:
Q  222 tagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||||| ||||||||||||||||||||    
T  124852 tagggcttcggcctagcagagatcttttgagatct 124886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 256421 - 256471
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| |||||  ||||| ||||||||||||||||||||    
T  256421 gatgttttattcattattgggctctggcctagcagagatcttttgagatct 256471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 193265 - 193224
Alignment:
Q  211 tttattcgttatagggcttcggcctggcagagatcttttgag 252  Q
    ||||||| |||| |||||||||||| ||||||||||||||||    
T  193265 tttattcattattgggcttcggcctagcagagatcttttgag 193224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 112; Significance: 1e-56; HSPs: 5)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 107 - 273
Target Start/End: Complemental strand, 78150 - 77986
Alignment:
Q  107 gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacg 206  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||  |||||| ||||||||| ||||||||| |||||||||| |||||    
T  78150 gatgttttattcattatagggcttcggcctggcagagatcttttgagatctagtt--atagggtttcggcctagcagagatcttttgagatctgaatacg 78053  T
Q  207 atgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||| ||| ||||||||||||    
T  78052 atgttttattcgttatagggcttcgtcctggaagagatcttttgagatctagatttgggtgacgacc 77986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 78312 - 78159
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||| | |    
T  78312 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgtt 78213  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagat 155  Q
    || |||||||||||||||| || ||||| |||||| | ||||||||||||||||    
T  78212 gagatgatgttttattcatcatagggcttcggcctggaagagatcttttgagat 78159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 164 - 256
Target Start/End: Complemental strand, 78192 - 78100
Alignment:
Q  164 atagggcttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||||||   |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  78192 atagggcttcggcctggaagagatcttttgagatatggatacgatgttttattcattatagggcttcggcctggcagagatcttttgagatct 78100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 38969 - 38876
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  | | |||| |||||||||| ||||||||||||| |   ||||||||||||||||||||||    
T  38969 caatataattgggtgttgtcctatatattgtggagaaaattgtgaattgttgttgcattatcgagtcttgttacatgtccatgcatcatagtcg 38876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 78207 - 78152
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggata 261  Q
    |||||||||||| | ||||||||||||||||| |||||||||||||||| ||||||    
T  78207 gatgttttattcatcatagggcttcggcctggaagagatcttttgagatatggata 78152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 107; Significance: 1e-53; HSPs: 4)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 6009 - 6203
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | ||||||||||||||  |||||||||| ||||||||||| |||||| ||| | |    
T  6009 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattg-cgagtccttatacatgtccatggatcatactcgtgtt 6107  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||| |||||||||    
T  6108 gagatgatgatttattcattattgggcttcggcctagcagagatcttttgagatctagttt--tagggcttcggcctggcagagatcttttgagatct 6203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 125 - 273
Target Start/End: Original strand, 6171 - 6318
Alignment:
Q  125 gggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttatt-cgttata 223  Q
    ||||| |||||| |||||||||||||||||||||||||||  ||||||||||||  ||||||||| |||||||||||||||||||||| ||| |||||||    
T  6171 gggcttcggcctggcagagatcttttgagatctagtttta--gggcttcggcctggcagagatcttttgagatctggatacgatgtttgatttcgttata 6268  T
Q  224 gggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  6269 gggcttccgcctggcagagatcttttgagatctggatataggtgacgacc 6318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 6113 - 6163
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||| ||||||| |||| |||||||||||| ||||||||||||||||||||    
T  6113 gatgatttattcattattgggcttcggcctagcagagatcttttgagatct 6163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 6169 - 6203
Alignment:
Q  222 tagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||||||||||||||||||||||||||    
T  6169 tagggcttcggcctggcagagatcttttgagatct 6203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140 (Bit Score: 106; Significance: 4e-53; HSPs: 6)
Name: scaffold1140
Description:

Target: scaffold1140; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 1944 - 1751
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||| | |    
T  1944 atcaatataattgggtgtcgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgtgtt 1845  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatc 198  Q
     |||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||  || |||||| ||||||||    
T  1844 caaatgat-atttattcattattgggcttcggcctagcagagatcttttgaggtctagttt--tagggcttcggcctggcaaagatcttttgagatc 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 120 - 273
Target Start/End: Complemental strand, 1747 - 1595
Alignment:
Q  120 ttattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttatt-cg 218  Q
    |||| ||||| |||||| ||||||||||||||||||| ||||  |||||||||||||||  ||||||||| ||||||||| |||||||||||| ||| ||    
T  1747 ttatagggcttcggcctggcagagatcttttgagatcaagtt--atagggcttcggcctggcagagatcttttgagatctagatacgatgtttgatttcg 1650  T
Q  219 ttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||| || ||||| |||||||||||||||||||| ||||||||||||    
T  1649 ttatagggcttctgcttggcaaagatcttttgagatctggatttgggtgacgacc 1595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 1748 - 1711
Alignment:
Q  218 gttatagggcttcggcctggcagagatcttttgagatc 255  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1748 gttatagggcttcggcctggcagagatcttttgagatc 1711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 1782 - 1711
Alignment:
Q  125 gggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatc 198  Q
    ||||| |||||| ||| ||||||||||||||| ||  |||||||||||||||||  ||||||||| ||||||||    
T  1782 gggcttcggcctggcaaagatcttttgagatcaag--ttatagggcttcggcctggcagagatcttttgagatc 1711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 255
Target Start/End: Complemental strand, 1784 - 1751
Alignment:
Q  222 tagggcttcggcctggcagagatcttttgagatc 255  Q
    |||||||||||||||||| |||||||||||||||    
T  1784 tagggcttcggcctggcaaagatcttttgagatc 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 1835 - 1794
Alignment:
Q  211 tttattcgttatagggcttcggcctggcagagatcttttgag 252  Q
    ||||||| |||| |||||||||||| ||||||||||||||||    
T  1835 tttattcattattgggcttcggcctagcagagatcttttgag 1794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 103; Significance: 3e-51; HSPs: 6)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 125 - 273
Target Start/End: Complemental strand, 28466 - 28319
Alignment:
Q  125 gggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttatt-cgttata 223  Q
    ||||| |||||| |||||||||||||||||||||||||||  ||||||||||||  ||||||||| |||||||||||||||||||||| ||| |||||||    
T  28466 gggcttcggcctggcagagatcttttgagatctagtttta--gggcttcggcctggcagagatcttttgagatctggatacgatgtttgatttcgttata 28369  T
Q  224 gggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28368 gggcttcggcctggcagagttcttttgagatctggatatgggtgacgacc 28319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 28645 - 28550
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  28645 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttatacatgttcatgcatcatagtcg 28550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 28508 - 28434
Alignment:
Q  123 ttgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    ||||||| |||| |||  ||||||||||||||||||||||  ||||||||||||||  ||||||||| |||||||||    
T  28508 ttgggcttcggcgtaggggagatcttttgagatctagttt--tagggcttcggcctggcagagatcttttgagatct 28434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 256
Target Start/End: Complemental strand, 28468 - 28434
Alignment:
Q  222 tagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||||||||||||||||||||||||||    
T  28468 tagggcttcggcctggcagagatcttttgagatct 28434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 28547 - 28474
Alignment:
Q  124 tgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    |||||| |||||| |||||||||||||||||||||||||  | |||||||||| ||   ||||||| |||||||||    
T  28547 tgggcttcggccttgcagagatcttttgagatctagttt--ttgggcttcggcgtaggggagatcttttgagatct 28474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 28546 - 28514
Alignment:
Q  224 gggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| ||||||||||||||||||||    
T  28546 gggcttcggccttgcagagatcttttgagatct 28514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 98; Significance: 2e-48; HSPs: 6)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 14664 - 14858
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||  |||||||||||||||||||| |||| |||| | ||| |||||||||||||||||||||| || ||||||||||||||||| | | |    
T  14664 atcaatataattaggtgttgtcctatatattgaggttgaaattgtggatttttgtcgcattatcgagtccttatacttgtccatgcatcatagttgtgtt 14763  T
Q  102 gaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatc 198  Q
    || |||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||  || |||||| ||||||||    
T  14764 gagatgatgttttattcgtcattgggcttcggcctagcagagatcttttgaggtctagttt--tagggcttcggcctggcaaagatcttttgagatc 14858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 120 - 273
Target Start/End: Original strand, 14862 - 15014
Alignment:
Q  120 ttattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatctggatacgatgttttatt-cg 218  Q
    |||| ||||| |||||| |||||||||||||||||||||||||||  ||||||||||||  ||||||||| ||||||||| |||||||||||| ||| ||    
T  14862 ttatagggcttcggcctggcagagatcttttgagatctagtttta--gggcttcggcctggcagagatcttttgagatctagatacgatgtttgatttcg 14959  T
Q  219 ttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  14960 ttatagggcttcagcttggcagagatcttttgagatctggatatgggtgacgacc 15014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 14861 - 14899
Alignment:
Q  218 gttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14861 gttatagggcttcggcctggcagagatcttttgagatct 14899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 14827 - 14899
Alignment:
Q  125 gggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    ||||| |||||| ||| ||||||||||||||| ||  |||||||||||||||||  ||||||||| |||||||||    
T  14827 gggcttcggcctggcaaagatcttttgagatcaag--ttatagggcttcggcctggcagagatcttttgagatct 14899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 14769 - 14815
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgag 252  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||    
T  14769 gatgttttattcgtcattgggcttcggcctagcagagatcttttgag 14815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 255
Target Start/End: Original strand, 14825 - 14858
Alignment:
Q  222 tagggcttcggcctggcagagatcttttgagatc 255  Q
    |||||||||||||||||| |||||||||||||||    
T  14825 tagggcttcggcctggcaaagatcttttgagatc 14858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 95; Significance: 2e-46; HSPs: 6)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 95081 - 94879
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg---- 97  Q
    ||||||||||||||||||||| ||||||||| || ||| | ||| | |||||||||||||||||||||||||  ||||||||||||||||||||||        
T  95081 atcaatataattgagtgttgttctatatattaaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtg 94982  T
Q  98 -agatg--aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttga 194  Q
     ||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||  ||||||||| ||||    
T  94981 gagattttatatgatgttttattcattattgggctccggcctagcagagatcttttgagatctag--ttattgggctccggccttgcagagatcttttga 94884  T
Q  195 gatct 199  Q
    |||||    
T  94883 gatct 94879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 66840 - 66934
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  66840 atcaatataattgggtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtcattagacatgtccatgcatcatagtcg 66934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 94916 - 94874
Alignment:
Q  120 ttattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  94916 ttattgggctccggccttgcagagatcttttgagatctagttt 94874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 94969 - 94919
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  94969 gatgttttattcattattgggctccggcctagcagagatcttttgagatct 94919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 94833 - 94794
Alignment:
Q  123 ttgggctccggcctagcagagatcttttgagatctagttt 162  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  94833 ttgggcttcggccttgcagagatcttttgagatctagttt 94794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 94831 - 94799
Alignment:
Q  224 gggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| ||||||||||||||||||||    
T  94831 gggcttcggccttgcagagatcttttgagatct 94799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 92; Significance: 9e-45; HSPs: 3)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 6762 - 6964
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | |||||||| ||||||||||||||||  |||||||||||||||||||||| | |    
T  6762 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtagcattatcgagtccttgtacatgtccatgcatcatagtcgggtt 6861  T
Q  102 gaaat-------gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttga 194  Q
    || ||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||| || |||||||||  ||||||||| ||||    
T  6862 gagattttatatgatgttttattcattattgggctacggcctagcagagatcttttgagatctag--ttattggacttcggccttgcagagatcttttga 6959  T
Q  195 gatct 199  Q
    |||||    
T  6960 gatct 6964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 6874 - 6924
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  6874 gatgttttattcattattgggctacggcctagcagagatcttttgagatct 6924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 6927 - 6968
Alignment:
Q  120 ttattgggctccggcctagcagagatcttttgagatctagtt 161  Q
    ||||||| || |||||| ||||||||||||||||||||||||    
T  6927 ttattggacttcggccttgcagagatcttttgagatctagtt 6968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 91; Significance: 4e-44; HSPs: 3)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 171 - 273
Target Start/End: Complemental strand, 31184 - 31082
Alignment:
Q  171 ttcggcctatcagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacg 270  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31184 ttcggcctggcagagatcttttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacg 31085  T
Q  271 acc 273  Q
    |||    
T  31084 acc 31082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 31149 - 31099
Alignment:
Q  107 gatgttttattcattattgggctccggcctagcagagatcttttgagatct 157  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  31149 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 31099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 31136 - 31094
Alignment:
Q  162 ttatagggcttcggcctatcagagatctgttgagatctggata 204  Q
    |||||||||||||||||  ||||||||| ||||||||||||||    
T  31136 ttatagggcttcggcctggcagagatcttttgagatctggata 31094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 90; Significance: 1e-43; HSPs: 8)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 87202 - 87035
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| ||||| |||||||||||||| ||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||||||| | |    
T  87202 atcaatataattgggtgttctcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 87103  T
Q  102 gaaat-------gatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    || ||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  87102 gagattttatatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 87035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 77124 - 76977
Alignment:
Q  23 tcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatgaaat-------gatgtttt 114  Q
    |||||||||||||| ||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||||||| | ||| ||       ||||||||    
T  77124 tcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgttgagattttatatgatgtttt 77025  T
Q  115 attcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  77024 attcattattgggctccggcctagcagagatcttttgagatctagttt 76977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 138212 - 138306
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||  |||||||||||||||||||  ||| |||| | ||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  138212 atcaatataattaggtgttgtcctatatattgaagtgaaattgtggattgttgtcgcattatcgagtccctgtacatgtccatgcatcatagtcg 138306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 77032 - 76982
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  77032 gatgttttattcattattgggctccggcctagcagagatcttttgagatct 76982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 87090 - 87040
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  87090 gatgttttattcattattgggctccggcctagcagagatcttttgagatct 87040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 76936 - 76897
Alignment:
Q  123 ttgggctccggcctagcagagatcttttgagatctagttt 162  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  76936 ttgggcttcggccttgcagagatcttttgagatctagttt 76897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 10385 - 10329
Alignment:
Q  42 attgagaattgttgtcgcattatcgagtccttaca-catgtccatgcatcatagtcg 97  Q
    |||| |||||| ||||||||||||||||| ||  | |||||||||||||||||||||    
T  10385 attgtgaattgatgtcgcattatcgagtctttgtaacatgtccatgcatcatagtcg 10329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 76934 - 76902
Alignment:
Q  224 gggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| ||||||||||||||||||||    
T  76934 gggcttcggccttgcagagatcttttgagatct 76902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 89; Significance: 6e-43; HSPs: 3)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 3602 - 3510
Alignment:
Q  181 cagagatctgttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3602 cagagatcttttgagatctggatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctggatatgggtgacgacc 3510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 3577 - 3527
Alignment:
Q  107 gatgttttattcattattgggctccggcctagcagagatcttttgagatct 157  Q
    |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  3577 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 3527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 3564 - 3522
Alignment:
Q  162 ttatagggcttcggcctatcagagatctgttgagatctggata 204  Q
    |||||||||||||||||  ||||||||| ||||||||||||||    
T  3564 ttatagggcttcggcctggcagagatcttttgagatctggata 3522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 84; Significance: 6e-40; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 35093 - 34998
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35093 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcga 34998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 844 - 936
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagt 95  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  844 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagt 936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 155754 - 155851
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  155754 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagttcttatacatgtccatgcatcatagtcgag 155851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 17491 - 17585
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17491 atcaatatcattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 17585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 2975 - 3069
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2975 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 23102 - 23194
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||| |||||||||||||||||| | ||| | ||| |||||| ||||||||||||||||| |   |||||||||||||||||||||    
T  23102 caatataattgggtgttgtcctatatattgtggtgaaaattgtgaattgatgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 23194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 30111 - 30017
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30111 atcaatataattgggtgttgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 30017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 38047 - 37953
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38047 atcaatataattgggtgttgtcctatatattgagttgagattgtgatttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 37953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 82; Significance: 9e-39; HSPs: 4)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 26125 - 26292
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| ||||||||||||||||| || ||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||||||| | |    
T  26125 atcaatataattgggtgttgtcctatatatttaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgtgtt 26224  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    |       | ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  26225 gagattttatatgatgttttattcattattgggctccagcctagcatagatcttttgagatctagttt 26292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 70801 - 70892
Alignment:
Q  6 aatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||| || ||||| ||||||||||||||  || | ||| | |||||||||||||||||||||||||  |||||||||||||||||||||    
T  70801 aatataaatgggtgttatcctatatattgaggagaaacttgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtc 70892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 26333 - 26372
Alignment:
Q  123 ttgggctccggcctagcagagatcttttgagatctagttt 162  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  26333 ttgggcttcggccttgcagagatcttttgagatctagttt 26372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 26335 - 26367
Alignment:
Q  224 gggcttcggcctggcagagatcttttgagatct 256  Q
    |||||||||||| ||||||||||||||||||||    
T  26335 gggcttcggccttgcagagatcttttgagatct 26367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 796 - 996
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | ||||||||||||||||||| || |   |||||||||||||||||||||| | |    
T  796 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgaatcttgttacatgtccatgcatcatagtcgtgtt 895  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttga 194  Q
    |       | | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||  ||||||||| ||||    
T  896 ggggatttatacgatgttttattcgttattgggctccggcctagcagagatcttttgagatctagtttt---gggattcggccttgcagagatcttttga 992  T
Q  195 gatc 198  Q
    ||||    
T  993 gatc 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 904 - 958
Alignment:
Q  202 atacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  904 atacgatgttttattcgttattgggctccggcctagcagagatcttttgagatct 958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 5940 - 5846
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5940 atcaatataattgggtgtcgtcctatatattgagttgagattgtgaattgttgtcgcattatcgagttcttacacatgtccatgcatcatagtcg 5846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 2242 - 2409
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    |||||||||| || |||||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||  |||||||||||||||||||||| | |    
T  2242 atcaatataagtgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtcgggtt 2341  T
Q  102 g-------aaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 162  Q
    |       | |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  2342 gagtctttatatgatgttttattcataattgggctccggcctagcagagatcatttgtgatctagttt 2409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 16203 - 16106
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16203 atcaatataattgggtgttgtcctatatattgaggttgaaattgtgaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 16106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 13598 - 13690
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || |||||||||||||||||| || |   ||||||||||||||||||||||    
T  13598 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgaatcttgttacatgtccatgcatcatagtcg 13690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 3092 - 3187
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||||||||||||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3092 atcaatataattgagtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcg 3187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 13142 - 13310
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattga-gaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagt------ 95  Q
    ||||||||||||| |||||||||||||||||||| ||| | | | | |||||||||||||||||||||||||  ||||||||||||||||||||          
T  13142 atcaatataattgggtgttgtcctatatattgaggtgaaaattatggattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtagtgtt 13241  T
Q  96 -cgagatgaaatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtttt 163  Q
      ||| | | |||||||||| ||||||||||||||||| ||||||||||||| |||| |||||||||||    
T  13242 gagagtttatatgatgttttgttcattattgggctccgccctagcagagatcatttgtgatctagtttt 13310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 315 - 218
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  315 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgag 218  T

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Target: scaffold0302 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 4601 - 4504
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4601 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgag 4504  T

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Target: scaffold0225 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 15058 - 14961
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattga-gttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| ||||||||||||||||||| ||||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15058 atcaatataattgggtgttgtcctatatattgaagttgaaattgtggattgttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgag 14961  T

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Target: scaffold0225; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 28523 - 28482
Alignment:
Q  58 gcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  28523 gcattatcgagtccttatacatgtccatgcatcatagtcgag 28482  T

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Target: scaffold0022 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 6549 - 6646
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| |||||||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  6549 atcaatataattgggtgttgtcctatatattgaggttgatattgtgaattgttgtcgcattattgagtccttatacatttccatgcatcatagtcgag 6646  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 108359 - 108315
Alignment:
Q  54 tgtcgcattatcgagtccttac-acatgtccatgcatcatagtcg 97  Q
    ||||||||||||||||| || | ||||||||||||||||||||||    
T  108359 tgtcgcattatcgagtctttgctacatgtccatgcatcatagtcg 108315  T

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Target: scaffold0141 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 25661 - 25567
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25661 atcaatataattgggtgttgtcctatatattgagtttgacatggtga-ttgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 25567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 21406 - 21312
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagtt-gagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||||| || || | || ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21406 atcaatataattgggtgttgtcctatatattgagtttgacatggtga-ttgttatcgcattatcgagtccttacacatgtccatgcatcatagtcg 21312  T

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Target: scaffold0413 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 9326 - 9423
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| ||| |||||||||||||||| |||| |||| | |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  9326 atcaatataattgggtgctgtcctatatattgaggttgaaattgtggattgttgtagcattatcgagtccttatacatgtccatgcatcatagtcgag 9423  T

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Target: scaffold0032 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 109482 - 109579
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  109482 atcaatataattgggtgttgtcctatatattgaggttgaaattgtggattgttgtcgcattatcgagtccttatacatgtttatgcatcatagtcgag 109579  T

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Target: scaffold0032; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 54395 - 54303
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttac-acatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  54395 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtc-ttactacatgtccatgcatcatagtcg 54303  T

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Target: scaffold0213 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 27779 - 27625
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagatga 103  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   |||||||||||||||||||||| | |||    
T  27779 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgtgttga 27681  T
Q  104 aat--gatgttttattcattattgggctccggcctagcagagatcttttgagatct 157  Q
     ||  |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  27680 gatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 27625  T

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Target: scaffold0213; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 27680 - 27625
Alignment:
Q  201 gatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27680 gatacgatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 27625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 18332 - 18240
Alignment:
Q  105 atgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttatagggcttcggcctatcagagatctgttgagatct 199  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||| ||||||| ||||||||| |||||||||    
T  18332 atgatgctttattcattattgggctccggcctagcagagatcttttgagatctag--ttattgtgctccggcctagcagagatcttttgagatct 18240  T

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Target: scaffold0292; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 18277 - 18234
Alignment:
Q  120 ttattgggctccggcctagcagagatcttttgagatctagtttt 163  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  18277 ttattgtgctccggcctagcagagatcttttgagatctagtttt 18234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 18330 - 18280
Alignment:
Q  206 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatct 256  Q
    |||| ||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  18330 gatgctttattcattattgggctccggcctagcagagatcttttgagatct 18280  T

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Target: scaffold0026 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 106760 - 106663
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||| ||||||||||||||| |||| | || | ||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  106760 atcaatataattgggtgtcgtcctatatattgaggttgaaactgtggatttttgtcgcattatcgagtccttatacatgtccatgcatcatagtcgag 106663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 4531 - 4469
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgagattgagaattgttgtcgcattatc 65  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4531 atcaatataattgggtgttgtcctatatattgagtcgagattgagaattgttgtcgcattatc 4469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 14439 - 14345
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||||| ||||||||||||||||||||  || | ||| |||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  14439 atcaatataattgggtgttgtcctatatattgaggagaaaattgtgaattgttgtcgcattgtcgagtccttgtacatgtccatgcatcatagtc 14345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 27335 - 27241
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||||| || |||||||||||||||||  || | ||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  27335 atcaatataattgggttttgtcctatatattgaggagaaaattgtgaattgttgtcgcattatcgagtccttgtacatgtccatgcatcatagtc 27241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 51790 - 51693
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| |||||||||||||||||| || |||||| |||| | ||||||||||| |||||    
T  51790 atcaatataattgggtgttgtcctatatattgaggttgatattgtgaattgttgtcgcattattgattccttatacattttcatgcatcatattcgag 51693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 1186 - 1289
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattga------gaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagt 95  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||      ||||||| |||||||||||||||||||| | |||| |||||||||||||    
T  1186 atcaatataattgggtgttgtcctatatattgagattgagattgaaattgtgaattgtggtcgcattatcgagtccttatatatgttcatgcatcatagt 1285  T
Q  96 cgag 99  Q
    ||||    
T  1286 cgag 1289  T

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Target: scaffold0103 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 32343 - 32173
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc----- 96  Q
    ||||||||||||| | |||||||||||||||| | ||| | ||| | |||||||||||||||||||||| ||  |||||||||||||||||||||         
T  32343 atcaatataattgggagttgtcctatatattgtggtgaaaattgtggattgttgtcgcattatcgagtctttgtacatgtccatgcatcatagtcgtgtt 32244  T
Q  97 gaga--tgaaatgatgtttt--attcattattgggctccggcctagcagagatcttttgagatctagtttt 163  Q
    ||||  ||| ||||||||||   | ||| ||||||||||||||||||||||||| || | |||||||||||    
T  32243 gagatttgatatgatgtttttgttgcatcattgggctccggcctagcagagatcattggtgatctagtttt 32173  T

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Target: scaffold0240 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 6307 - 6212
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||  |||||| |||| ||||||||||    
T  6307 atcaatataattgggtgttgtcctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtccttgtacatgttcatgaatcatagtcg 6212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 71853 - 71954
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgagat 101  Q
    ||||||||||||| | ||| |||||||||||| | ||| | |||||||||||||||||||||||||||| |   |||||||||||||||||||||| |||    
T  71853 atcaatataattgggagttatcctatatattgtggtgaaaattgagaattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcgtgat 71952  T
Q  102 ga 103  Q
    ||    
T  71953 ga 71954  T

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Target: scaffold0031 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 69526 - 69432
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgag-ttgagattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||||| | |||||||||||||||| | || | |||| |||||||||||||| |||||||||||   |||||||||||||||||||||    
T  69526 atcaatataattgggagttgtcctatatattgtggttaaaattgtgaattgttgtcgcactatcgagtcctgttacatgtccatgcatcatagtc 69432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 30796 - 30667
Alignment:
Q  42 attgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc-----gaga-tgaaatgatgtttt-attcattattgggctccggc 134  Q
    |||| |||||| ||||||||||||||||| |   |||||||||||||||||||||     |||| ||| ||||||||||  | ||| ||||||||||| |    
T  30796 attgtgaattgatgtcgcattatcgagtcttgctacatgtccatgcatcatagtcgtgttgagattgatatgatgttttggtgcatcattgggctccgac 30697  T
Q  135 ctagcagagatc-ttttgagatctagtttt 163  Q
    |||||||||||| ||| | |||||||||||    
T  30696 ctagcagagatcatttagtgatctagtttt 30667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 3383 - 3291
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  3383 caatataattgggtgttgtcctatatattgtggtgaaaattgaga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 3291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 5991 - 5899
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  5991 caatataattgggtgttgtcctatatattgtggtgaaaattgaga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 5899  T

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Target: scaffold0383; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 1122 - 1029
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcga 98  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   |||||||||||||||||||||||    
T  1122 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcga 1029  T

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Target: scaffold0008 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 21419 - 21268
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc----- 96  Q
    ||||||||||||  ||||||||||||||| |||  ||| | ||| |  ||||||||| ||||||||||| |   |||||||||||||||||||||         
T  21419 atcaatataattcggtgttgtcctatatactgaagtgaaaattgtggtttgttgtcgtattatcgagtcttgttacatgtccatgcatcatagtcatgtt 21320  T
Q  97 gagatg--aaatgatgttttattcattattgggctccggcctagcagagatc 146  Q
    |||||   | |||||||||||||||||| |||||||||||||||||||||||    
T  21319 gagattttatatgatgttttattcattactgggctccggcctagcagagatc 21268  T

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Target: scaffold0008; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 28898 - 28857
Alignment:
Q  105 atgatgttttattcattattgggctccggcctagcagagatc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  28898 atgatgttttattcattattgggctccggcctagcagagatc 28857  T

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Target: scaffold0008; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 129603 - 129695
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  129603 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 129695  T

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Target: scaffold0622 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 8193 - 8098
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| ||||||| |||||||||||| ||| | ||| | |||||||||||||||||||||| |   ||||||| ||||||||||||||    
T  8193 atcaatataattgggtgttgttctatatattgaggtgaaaattgtggattgttgtcgcattatcgagtcttgttacatgtcaatgcatcatagtcg 8098  T

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Target: scaffold0190 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 8839 - 8745
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||||| | |||||||||||||||| | ||| | ||| | |||||||||||||||||||||| |   |||||||||||||||||||||    
T  8839 atcaatataattgggagttgtcctatatattgtggtgaaaattgtggattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 8745  T

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Target: scaffold0171 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 31341 - 31296
Alignment:
Q  228 ttcggcctggcagagatcttttgagatctggatatgggtgacgacc 273  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  31341 ttcggcctagcagagatcttttgagatctggatatgggtgacgacc 31296  T

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Target: scaffold0083 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 12956 - 12864
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| | ||| | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  12956 caatataattgggtgttgtcctatatattgtggtgaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 12864  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 236939 - 236847
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| | || | |||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  236939 caatataattgggtgttgtcctatatattgtggtggaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 236847  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 270878 - 270786
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| || ||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   |||||| |||||||||||||||    
T  270878 caatataattgggttttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgttcatgcatcatagtcg 270786  T

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Target: scaffold0338 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 7553 - 7459
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||||| | || ||||||||||||| | ||| | ||| | |||||||||||||||||||||| |   |||||||||||||||||||||    
T  7553 atcaatataattgggagtggtcctatatattgtggtgaaaattgtggattgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 7459  T

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Target: scaffold0195 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 20149 - 20057
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  20149 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 20057  T

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Target: scaffold0195; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 18065 - 17974
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   |||||||||||||||||||||    
T  18065 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 17974  T

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Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 145288 - 145196
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  145288 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttattacatgtccatgcatcatagtcg 145196  T

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Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 147547 - 147455
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| ||||| |||||||||||| |  || | ||| || ||||||||||||||||||||| |   |||| |||||||||||||||||    
T  147547 caatataattgggtgttttcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtcttattacatatccatgcatcatagtcg 147455  T

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Target: scaffold0183 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 5740 - 5700
Alignment:
Q  17 gtgttgtcctatatattgagttgagattgagaattgttgtc 57  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  5740 gtgttgtcctatatattgagttgagattgtgaattgttgtc 5700  T

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Target: scaffold0462 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 4890 - 4795
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttg-agattgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||||| | |||||||||||||||| | || | |||| ||||||||||||  |||||||||  |   ||||||||||||||||||||||    
T  4890 atcaatataattgggagttgtcctatatattgtggtgaaaattgtgaattgttgtcgtgttatcgagttttgttacatgtccatgcatcatagtcg 4795  T

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Target: scaffold0750 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 6737 - 6831
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtc 96  Q
    |||||||||||||   |||||||| ||||||| | ||| | ||| |||||| ||||||||||||||||| |   |||||||||||||||||||||    
T  6737 atcaatataattggaagttgtcctttatattgtggtgaaaattgtgaattgatgtcgcattatcgagtcttgttacatgtccatgcatcatagtc 6831  T

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Target: scaffold0342 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 4602 - 4505
Alignment:
Q  3 atcaatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcgag 99  Q
    ||||| ||||||| | |||||||||||||||| | ||| | ||| ||||||||||| |||||||||||| |   |||||||||| |||| ||||||||    
T  4602 atcaaaataattgggagttgtcctatatattgtggtgaaaattgtgaattgttgtcacattatcgagtcttattacatgtccatccatcgtagtcgag 4505  T

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Target: scaffold0132 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 41464 - 41372
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || ||||||||||||||||||||| ||  |||| || ||||||||||||||    
T  41464 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgcattatcgagtctttttacatttctatgcatcatagtcg 41372  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 52678 - 52770
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || |||||||| |||||||||||| |   ||||||||||||||||||||||    
T  52678 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcacattatcgagtcttgttacatgtccatgcatcatagtcg 52770  T

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Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 56630 - 56722
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||||||||||||||||| |  || | ||| || |||||||| |||||||||||| |   ||||||||||||||||||||||    
T  56630 caatataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcacattatcgagtcttgttacatgtccatgcatcatagtcg 56722  T

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Target: scaffold1753 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1753
Description:

Target: scaffold1753; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 175 - 127
Alignment:
Q  49 attgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    |||||||||||||||||||||| |   ||||||||||||||||||||||    
T  175 attgttgtcgcattatcgagtcttattacatgtccatgcatcatagtcg 127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 7736 - 7646
Alignment:
Q  7 atataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||| |||||||||||||||||| |  || | ||| || ||||||||| ||||||||||| |   ||||||||||||||||||||||    
T  7736 atataattgggtgttgtcctatatattgtggagaaaattgtga-ttgttgtcgtattatcgagtcttgttacatgtccatgcatcatagtcg 7646  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 163
Target Start/End: Complemental strand, 145644 - 145518
Alignment:
Q  47 gaattgttgtcgcattatcgagtccttac-acatgtccatgcatcatagtcg-----agat--gaaatgatgttttatt-cattattgggctccggccta 137  Q
    |||||| |||||||||||| |||| ||   ||||||||||||||||||||||     ||||  || |||||||||| || ||| ||||||||||||||||    
T  145644 gaattgatgtcgcattatcaagtctttgttacatgtccatgcatcatagtcgtgttgagatttgatatgatgttttgttgcatcattgggctccggccta 145545  T
Q  138 gcagagatc-ttttgagatctagtttt 163  Q
    ||||||||| ||| | |||||||||||    
T  145544 gcagagatcatttagtgatctagtttt 145518  T

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Target: scaffold0068 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 60325 - 60244
Alignment:
Q  12 attgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcata 93  Q
    |||| |||||||||||||||||| | ||| | ||| || ||||||||||||||||||||| ||  |||||| |||||||||||    
T  60325 attgggtgttgtcctatatattgtggtgaaaattgtga-ttgttgtcgcattatcgagtctttttacatgttcatgcatcata 60244  T

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Target: scaffold0467 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 11439 - 11531
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| |||| ||||||||||||| |  || | ||| || ||||||| ||||||||||||| |   ||||||||||||||||||||||    
T  11439 caatataattgggtgtcgtcctatatattgtggagaaaattgtga-ttgttgttgcattatcgagtcttgttacatgtccatgcatcatagtcg 11531  T

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Target: scaffold0465 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 11329 - 11421
Alignment:
Q  5 caatataattgagtgttgtcctatatattgagttgaga-ttgagaattgttgtcgcattatcgagtccttacacatgtccatgcatcatagtcg 97  Q
    ||||||||||| || ||||||||||||||| |  || | ||| || || |||||||||||||||||| |   ||||||||||||||||||||||    
T  11329 caatataattgggtcttgtcctatatattgtggagaaaattgtgattt-ttgtcgcattatcgagtcttgttacatgtccatgcatcatagtcg 11421  T

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Target: scaffold0150 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 20407 - 20363
Alignment:
Q  54 tgtcgcattatcgagtccttac-acatgtccatgcatcatagtcg 97  Q
    ||||||||||||||||| || | ||||||||||||||||||||||    
T  20407 tgtcgcattatcgagtctttgctacatgtccatgcatcatagtcg 20363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 27236 - 27192
Alignment:
Q  54 tgtcgcattatcgagtccttac-acatgtccatgcatcatagtcg 97  Q
    ||||||||||||||||| || | ||||||||||||||||||||||    
T  27236 tgtcgcattatcgagtctttgctacatgtccatgcatcatagtcg 27192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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