View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8905A_low_166 (Length: 254)
Name: NF8905A_low_166
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8905A_low_166 |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 3 - 248
Target Start/End: Complemental strand, 33592943 - 33592698
Alignment:
| Q |
3 |
tgtagtatcagagatcttgataatggaaaagagtttgttgtgaaagaagttagagaagatggaatgtggaataaagtgaaggaggttggtactgggagac |
102 |
Q |
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| T |
33592943 |
tgtactatcagagatcttgataatggaaaagagtttgttgtgaaagaagttagagaagatggaatgtggaataaagtgaaggaggttggtactgggagac |
33592844 |
T |
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| Q |
103 |
agttgactatggaggaatttgagatgacggttggtcaatctccgattgtgcaggagcttatgcgacggcagaatcacgaggagaccggtgatgtagcagg |
202 |
Q |
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| T |
33592843 |
agttgactatggaggaatttgagatgacggttggtcaatctccgattgtgcaggagcttatgcgccggcagaatcacgaggagactggtgatgtagccgg |
33592744 |
T |
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| Q |
203 |
tggtggtggtggaaatgggagtaatggtaatggaggttgttctaag |
248 |
Q |
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| T |
33592743 |
tggtggtgttggaaatgggagtaatggtaatggaggttgttctaag |
33592698 |
T |
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