View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8905A_low_230 (Length: 242)

Name: NF8905A_low_230
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8905A_low_230
NF8905A_low_230
[»] chr3 (58 HSPs)
chr3 (16-225)||(1740754-1740963)
chr3 (19-224)||(795052-795254)
chr3 (14-105)||(26928847-26928938)
chr3 (19-152)||(21494027-21494160)
chr3 (22-99)||(39775162-39775239)
chr3 (21-154)||(6025407-6025542)
chr3 (19-106)||(14425294-14425381)
chr3 (22-99)||(3034202-3034279)
chr3 (22-99)||(3693177-3693254)
chr3 (19-96)||(8223491-8223568)
chr3 (22-99)||(8883729-8883806)
chr3 (22-99)||(8888489-8888566)
chr3 (22-99)||(14438134-14438211)
chr3 (22-99)||(18467796-18467873)
chr3 (22-99)||(32473458-32473535)
chr3 (19-99)||(16749378-16749458)
chr3 (19-99)||(18350233-18350313)
chr3 (19-99)||(19776441-19776521)
chr3 (22-100)||(10585647-10585725)
chr3 (22-99)||(3673145-3673222)
chr3 (22-99)||(8070238-8070315)
chr3 (19-96)||(8197008-8197085)
chr3 (22-99)||(18472590-18472667)
chr3 (20-149)||(26707018-26707147)
chr3 (19-99)||(4106784-4106864)
chr3 (19-99)||(4110636-4110716)
chr3 (19-99)||(9707049-9707129)
chr3 (19-99)||(14671949-14672029)
chr3 (19-99)||(15965611-15965691)
chr3 (19-99)||(15969535-15969615)
chr3 (19-99)||(15973459-15973539)
chr3 (21-96)||(37439021-37439096)
chr3 (14-154)||(20810614-20810751)
chr3 (27-99)||(29792-29864)
chr3 (19-99)||(8488848-8488928)
chr3 (19-99)||(18699236-18699316)
chr3 (19-99)||(22758638-22758718)
chr3 (21-158)||(25023633-25023768)
chr3 (51-154)||(26962334-26962437)
chr3 (14-154)||(38436674-38436811)
chr3 (22-100)||(45904002-45904080)
chr3 (22-85)||(53358660-53358724)
chr3 (19-78)||(43888580-43888639)
chr3 (20-106)||(1688651-1688737)
chr3 (14-106)||(53119770-53119859)
chr3 (9-62)||(757836-757888)
chr3 (9-62)||(2207271-2207323)
chr3 (9-62)||(3419560-3419612)
chr3 (52-93)||(6595857-6595898)
chr3 (9-62)||(7570688-7570740)
chr3 (9-62)||(20520528-20520580)
chr3 (9-62)||(23660936-23660988)
chr3 (9-62)||(23665595-23665647)
chr3 (9-62)||(24037843-24037895)
chr3 (27-68)||(47408645-47408686)
chr3 (20-72)||(27604946-27604998)
chr3 (19-99)||(51922890-51922970)
chr3 (10-62)||(55326350-55326401)
[»] chr8 (30 HSPs)
chr8 (21-224)||(33848254-33848457)
chr8 (22-98)||(4237800-4237876)
chr8 (22-98)||(4242539-4242615)
chr8 (19-99)||(21384300-21384380)
chr8 (19-99)||(21387720-21387800)
chr8 (19-99)||(21411579-21411659)
chr8 (19-99)||(21806071-21806151)
chr8 (19-99)||(23915048-23915128)
chr8 (32-100)||(25367443-25367511)
chr8 (19-106)||(22104231-22104318)
chr8 (22-100)||(8330820-8330898)
chr8 (22-100)||(34818163-34818241)
chr8 (22-95)||(43302146-43302219)
chr8 (19-99)||(4582754-4582834)
chr8 (19-99)||(18862028-18862108)
chr8 (19-99)||(21827397-21827477)
chr8 (22-100)||(37772265-37772344)
chr8 (19-99)||(16066675-16066758)
chr8 (19-96)||(19393192-19393269)
chr8 (22-99)||(31449323-31449400)
chr8 (14-154)||(31030771-31030908)
chr8 (19-99)||(25733623-25733703)
chr8 (21-154)||(19566410-19566540)
chr8 (14-154)||(33616442-33616579)
chr8 (21-154)||(19430261-19430391)
chr8 (8-62)||(33417101-33417154)
chr8 (9-62)||(17020923-17020975)
chr8 (9-62)||(17551360-17551412)
chr8 (9-62)||(38181714-38181766)
chr8 (9-61)||(19167219-19167270)
[»] chr6 (31 HSPs)
chr6 (14-154)||(3902513-3902652)
chr6 (19-154)||(11956419-11956554)
chr6 (14-152)||(3902155-3902292)
chr6 (20-151)||(5600690-5600821)
chr6 (14-152)||(29325778-29325915)
chr6 (22-99)||(17963993-17964070)
chr6 (19-99)||(19772470-19772550)
chr6 (19-99)||(27324517-27324597)
chr6 (19-96)||(14073691-14073768)
chr6 (19-96)||(26981151-26981228)
chr6 (19-99)||(2077368-2077448)
chr6 (19-99)||(15704369-15704448)
chr6 (19-99)||(16624972-16625052)
chr6 (19-99)||(16760938-16761018)
chr6 (19-99)||(22806907-22806987)
chr6 (19-99)||(22949788-22949868)
chr6 (19-99)||(22953744-22953824)
chr6 (19-99)||(23872232-23872312)
chr6 (19-99)||(23876188-23876268)
chr6 (24-99)||(6112217-6112292)
chr6 (14-152)||(17281283-17281416)
chr6 (22-99)||(8748343-8748421)
chr6 (19-89)||(18387488-18387558)
chr6 (19-96)||(27073541-27073618)
chr6 (21-76)||(10642958-10643013)
chr6 (22-99)||(24588636-24588714)
chr6 (9-62)||(2699565-2699617)
chr6 (19-99)||(31477162-31477242)
chr6 (177-223)||(5600607-5600655)
chr6 (9-62)||(6407333-6407385)
chr6 (14-141)||(19478390-19478514)
[»] chr4 (44 HSPs)
chr4 (19-154)||(30564129-30564264)
chr4 (14-154)||(10318491-10318631)
chr4 (14-154)||(24490274-24490411)
chr4 (19-96)||(14899077-14899154)
chr4 (23-99)||(41817342-41817418)
chr4 (22-100)||(34560983-34561061)
chr4 (22-99)||(3997520-3997597)
chr4 (22-99)||(5270858-5270935)
chr4 (22-99)||(5927652-5927729)
chr4 (19-96)||(14868529-14868606)
chr4 (19-96)||(14877328-14877405)
chr4 (19-99)||(15011274-15011354)
chr4 (19-99)||(15225721-15225801)
chr4 (14-154)||(10120297-10120434)
chr4 (22-99)||(8660861-8660938)
chr4 (19-96)||(9185145-9185222)
chr4 (19-96)||(9191010-9191087)
chr4 (19-99)||(10713496-10713576)
chr4 (19-99)||(10927266-10927346)
chr4 (19-99)||(12488354-12488434)
chr4 (19-99)||(14953513-14953593)
chr4 (19-99)||(18023177-18023257)
chr4 (19-99)||(25690550-25690630)
chr4 (19-95)||(31728803-31728879)
chr4 (19-94)||(26034744-26034819)
chr4 (22-99)||(8694297-8694374)
chr4 (45-150)||(17359768-17359872)
chr4 (22-99)||(31766455-31766532)
chr4 (22-99)||(47575221-47575298)
chr4 (22-99)||(7902569-7902646)
chr4 (27-95)||(13521447-13521516)
chr4 (43-123)||(3258372-3258452)
chr4 (14-152)||(10120527-10120662)
chr4 (22-97)||(39320121-39320196)
chr4 (80-158)||(15451481-15451558)
chr4 (9-67)||(19102552-19102609)
chr4 (9-62)||(16421613-16421665)
chr4 (9-62)||(31269596-31269648)
chr4 (9-62)||(31274085-31274137)
chr4 (9-62)||(32221039-32221091)
chr4 (9-62)||(33468475-33468527)
chr4 (9-62)||(37259336-37259388)
chr4 (9-62)||(37264036-37264088)
chr4 (9-62)||(48276129-48276181)
[»] chr7 (35 HSPs)
chr7 (14-154)||(47761865-47762005)
chr7 (19-93)||(19096810-19096884)
chr7 (22-100)||(27256796-27256874)
chr7 (22-99)||(26341791-26341868)
chr7 (22-99)||(47102098-47102175)
chr7 (22-100)||(40864820-40864898)
chr7 (22-99)||(8076609-8076686)
chr7 (19-99)||(20488504-20488584)
chr7 (19-99)||(36477533-36477613)
chr7 (19-149)||(7874816-7874947)
chr7 (22-100)||(19640858-19640936)
chr7 (19-99)||(16459839-16459919)
chr7 (19-95)||(16580785-16580861)
chr7 (19-99)||(18426483-18426563)
chr7 (27-99)||(20485151-20485223)
chr7 (19-99)||(32302395-32302475)
chr7 (19-99)||(45169389-45169469)
chr7 (13-154)||(9973703-9973841)
chr7 (19-94)||(14259562-14259637)
chr7 (19-96)||(838893-838970)
chr7 (19-96)||(846069-846146)
chr7 (19-96)||(853446-853523)
chr7 (19-96)||(1204073-1204150)
chr7 (19-96)||(1211450-1211527)
chr7 (19-96)||(8954728-8954805)
chr7 (19-99)||(14928094-14928174)
chr7 (19-99)||(15351560-15351640)
chr7 (16-154)||(33226591-33226726)
chr7 (27-95)||(9650422-9650491)
chr7 (32-99)||(29727262-29727329)
chr7 (8-62)||(8268866-8268919)
chr7 (22-99)||(44509831-44509909)
chr7 (9-62)||(12799958-12800010)
chr7 (9-62)||(42626060-42626112)
chr7 (9-61)||(30258674-30258725)
[»] chr5 (29 HSPs)
chr5 (20-150)||(31986971-31987101)
chr5 (19-99)||(29167407-29167487)
chr5 (22-100)||(32461001-32461079)
chr5 (19-106)||(26869765-26869852)
chr5 (22-100)||(36941722-36941800)
chr5 (22-99)||(557255-557332)
chr5 (22-99)||(562027-562104)
chr5 (22-99)||(12044593-12044670)
chr5 (22-99)||(13300948-13301025)
chr5 (19-96)||(21826779-21826856)
chr5 (22-99)||(36936969-36937046)
chr5 (19-99)||(10754006-10754086)
chr5 (22-99)||(6154867-6154945)
chr5 (22-100)||(31732096-31732174)
chr5 (30-99)||(8770810-8770879)
chr5 (34-99)||(26667874-26667939)
chr5 (34-99)||(26939471-26939536)
chr5 (22-99)||(36430195-36430272)
chr5 (22-99)||(41997223-41997300)
chr5 (22-99)||(42001992-42002069)
chr5 (22-96)||(7452337-7452411)
chr5 (22-100)||(21323433-21323511)
chr5 (22-99)||(36424222-36424299)
chr5 (19-99)||(41096954-41097034)
chr5 (22-99)||(3666474-3666549)
chr5 (22-99)||(37549587-37549663)
chr5 (9-62)||(12103599-12103651)
chr5 (22-99)||(37652385-37652461)
chr5 (10-62)||(40148470-40148521)
[»] chr2 (33 HSPs)
chr2 (19-113)||(44683350-44683444)
chr2 (21-151)||(27556814-27556944)
chr2 (19-99)||(10160178-10160258)
chr2 (19-100)||(17968396-17968477)
chr2 (22-99)||(18344995-18345072)
chr2 (19-96)||(24286355-24286432)
chr2 (19-96)||(24292923-24293000)
chr2 (27-99)||(377748-377820)
chr2 (19-99)||(23068211-23068291)
chr2 (20-115)||(5771176-5771271)
chr2 (22-105)||(6297344-6297427)
chr2 (19-97)||(6856753-6856831)
chr2 (19-99)||(1284070-1284150)
chr2 (19-99)||(30344374-30344454)
chr2 (20-95)||(22844959-22845034)
chr2 (27-99)||(9785714-9785786)
chr2 (19-99)||(42248783-42248863)
chr2 (30-93)||(7559815-7559878)
chr2 (19-99)||(34069975-34070055)
chr2 (22-85)||(19891921-19891984)
chr2 (22-93)||(30658736-30658807)
chr2 (20-93)||(17327616-17327690)
chr2 (31-96)||(26897194-26897260)
chr2 (50-99)||(28855718-28855767)
chr2 (19-99)||(25375445-25375525)
chr2 (14-151)||(5089520-5089654)
chr2 (174-224)||(11658524-11658574)
chr2 (8-62)||(29678328-29678381)
chr2 (14-106)||(42914884-42914973)
chr2 (9-62)||(1934465-1934517)
chr2 (9-62)||(9180198-9180250)
chr2 (9-62)||(31327324-31327376)
chr2 (9-61)||(12797498-12797549)
[»] scaffold0015 (2 HSPs)
scaffold0015 (19-99)||(193725-193805)
scaffold0015 (22-96)||(188042-188116)
[»] scaffold1910 (1 HSPs)
scaffold1910 (19-97)||(422-500)
[»] scaffold0061 (1 HSPs)
scaffold0061 (22-100)||(49441-49519)
[»] scaffold0017 (1 HSPs)
scaffold0017 (22-100)||(149115-149193)
[»] chr1 (35 HSPs)
chr1 (22-100)||(10140677-10140755)
chr1 (19-99)||(41387433-41387513)
chr1 (27-94)||(14724504-14724571)
chr1 (22-99)||(10135909-10135986)
chr1 (19-96)||(22428656-22428733)
chr1 (22-99)||(26927155-26927232)
chr1 (22-99)||(41097416-41097493)
chr1 (19-95)||(1067037-1067113)
chr1 (19-99)||(16836744-16836824)
chr1 (19-99)||(39243481-39243561)
chr1 (19-99)||(39247036-39247116)
chr1 (27-106)||(26198922-26199001)
chr1 (22-99)||(18784011-18784089)
chr1 (20-150)||(25187995-25188125)
chr1 (22-99)||(3094648-3094725)
chr1 (19-99)||(1924512-1924592)
chr1 (30-98)||(19725363-19725431)
chr1 (19-99)||(20923526-20923606)
chr1 (19-96)||(14804060-14804137)
chr1 (22-95)||(51040949-51041022)
chr1 (19-88)||(52100690-52100759)
chr1 (19-99)||(21498207-21498287)
chr1 (20-99)||(13893873-13893952)
chr1 (177-224)||(14724680-14724727)
chr1 (33-99)||(40232846-40232912)
chr1 (19-96)||(14819528-14819605)
chr1 (19-100)||(17213901-17213982)
chr1 (31-99)||(2384704-2384772)
chr1 (22-106)||(33055595-33055679)
chr1 (16-152)||(39747002-39747134)
chr1 (9-62)||(7882557-7882609)
chr1 (28-99)||(2367608-2367679)
chr1 (14-154)||(26650882-26651019)
chr1 (9-62)||(25844326-25844378)
chr1 (9-62)||(39200233-39200285)
[»] scaffold0067 (1 HSPs)
scaffold0067 (14-151)||(33684-33821)
[»] scaffold0044 (2 HSPs)
scaffold0044 (19-96)||(64716-64793)
scaffold0044 (19-96)||(81114-81191)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-97)||(199748-199826)
[»] scaffold0357 (1 HSPs)
scaffold0357 (19-96)||(3808-3885)
[»] scaffold0327 (1 HSPs)
scaffold0327 (27-96)||(19683-19752)
[»] scaffold0132 (1 HSPs)
scaffold0132 (19-96)||(24757-24834)
[»] scaffold0575 (1 HSPs)
scaffold0575 (19-99)||(5339-5419)
[»] scaffold0572 (1 HSPs)
scaffold0572 (19-99)||(10434-10514)
[»] scaffold0431 (1 HSPs)
scaffold0431 (19-99)||(14935-15015)
[»] scaffold0232 (1 HSPs)
scaffold0232 (19-99)||(11750-11830)
[»] scaffold0018 (1 HSPs)
scaffold0018 (19-99)||(21863-21943)
[»] scaffold0011 (2 HSPs)
scaffold0011 (19-99)||(126959-127039)
scaffold0011 (14-146)||(7289-7418)
[»] scaffold0060 (2 HSPs)
scaffold0060 (22-100)||(47430-47508)
scaffold0060 (22-100)||(52374-52452)
[»] scaffold0041 (1 HSPs)
scaffold0041 (22-100)||(35161-35239)
[»] scaffold0020 (1 HSPs)
scaffold0020 (22-100)||(697-775)
[»] scaffold0155 (1 HSPs)
scaffold0155 (19-96)||(22231-22308)
[»] scaffold0452 (1 HSPs)
scaffold0452 (19-99)||(12426-12506)
[»] scaffold0415 (1 HSPs)
scaffold0415 (19-99)||(1044-1124)
[»] scaffold0229 (1 HSPs)
scaffold0229 (19-99)||(10884-10964)
[»] scaffold0157 (1 HSPs)
scaffold0157 (19-99)||(32043-32123)
[»] scaffold0141 (1 HSPs)
scaffold0141 (19-99)||(13470-13550)
[»] scaffold0124 (1 HSPs)
scaffold0124 (19-99)||(21444-21524)
[»] scaffold0034 (1 HSPs)
scaffold0034 (19-99)||(121122-121202)
[»] scaffold0031 (1 HSPs)
scaffold0031 (19-99)||(35469-35549)
[»] scaffold0182 (1 HSPs)
scaffold0182 (22-99)||(9338-9416)
[»] scaffold0991 (1 HSPs)
scaffold0991 (19-96)||(254-331)
[»] scaffold0205 (1 HSPs)
scaffold0205 (19-99)||(30823-30903)
[»] scaffold0096 (1 HSPs)
scaffold0096 (19-99)||(22265-22345)
[»] scaffold0045 (1 HSPs)
scaffold0045 (22-78)||(81374-81430)
[»] scaffold0027 (1 HSPs)
scaffold0027 (27-111)||(43355-43439)
[»] scaffold0628 (1 HSPs)
scaffold0628 (36-99)||(6961-7024)
[»] scaffold0019 (1 HSPs)
scaffold0019 (19-96)||(30240-30317)
[»] scaffold0292 (1 HSPs)
scaffold0292 (19-99)||(7723-7803)
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-99)||(70376-70456)
[»] scaffold0070 (1 HSPs)
scaffold0070 (33-100)||(58996-59063)
[»] scaffold0054 (1 HSPs)
scaffold0054 (9-67)||(29747-29804)
[»] scaffold0002 (1 HSPs)
scaffold0002 (9-62)||(4635-4687)


Alignment Details
Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 225
Target Start/End: Complemental strand, 1740963 - 1740754
Alignment:
Q  16 agcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagac 115  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1740963 agcagaagaatgactcgtcaacacaagttgaaaaagggagaagagaggaaaagcacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagac 1740864  T
Q  116 aaactctcattttatatgaagagttcgtaacaaaaaacggagtatttaaatggattaactctaaaacaaaccgcgtttgttttcgtgtgtggatatatcc 215  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1740863 gaactctcattttatatgaagagttcgtaacaaaaaacagagtatttaaatgaattaactctaaaacaaaccgcgtttgttttcgtgtgtggatatatcc 1740764  T
Q  216 ggaaccttct 225  Q
    ||||||||||    
T  1740763 ggaaccttct 1740754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 795254 - 795052
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaa 118  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||||||| | |||||||| ||||||||||||||| |||||||||||| |||||   |     
T  795254 agaagaaggactcgtcaacacaagtcgaaaaagagagaatagaggaaaagcgcatgaagcatcaactgtgaatttcagtgtaaagaataggtgaggggag 795155  T
Q  119 ctctcattttatatgaagagttcgtaacaaaaaacggagtatttaaatggattaactctaaaacaaaccgcgtttgttttcgtgtgtggatatatccgga 218  Q
     |||| ||||||| | |||| ||||||| |||||  ||||  ||||| |||||||||||||||||||  | ||||||||||  ||||||||||||| |||    
T  795154 ttctccttttatagggagagatcgtaac-aaaaatagagtgattaaagggattaactctaaaacaaatggtgtttgttttc--gtgtggatatatctgga 795058  T
Q  219 accttc 224  Q
    ||||||    
T  795057 accttc 795052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 26928847 - 26928938
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaa 105  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||    
T  26928847 gaagcagaagaagggctcgtcaacacaagtcgaagaagggagaagagaggaaaagcacatgaatcatcaactgtgaatttcggtgtaaagaa 26928938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 21494160 - 21494027
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaa 118  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||| |||||||| | |||||||||||||||||||  |||||| |||| | | |     
T  21494160 agaagaaggactcgtcaacacaagtcgaaggagggagaagagaggaaaagcacatgaatcatcaactgtgaatttcggtggtaagaatgagtggggcgag 21494061  T
Q  119 ctctcattttatatgaagagttcgtaacaaaaaa 152  Q
     |||| ||||||| ||||| ||||||||||||||    
T  21494060 atctccttttataggaagaattcgtaacaaaaaa 21494027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 39775239 - 39775162
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  39775239 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 39775162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 6025407 - 6025542
Alignment:
Q  21 aagaaggactcgtcaacacaagttgaaaaaggga--gaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaa 118  Q
    |||||||| | |||||||||||| |||  |||||  ||||||||||||||||||| || | ||||||||||| ||||||||||||||| |||| ||| |     
T  6025407 aagaaggaattgtcaacacaagtcgaaggagggatagaagagaggaaaaacacataaatcatcaactgtgaaattcggtgtaaagaatgagtgggacgag 6025506  T
Q  119 ctctcattttatatgaagagttcgtaacaaaaaacg 154  Q
    | ||| ||||||| | |||||| |||||||||||||    
T  6025507 ccctccttttatagggagagtttgtaacaaaaaacg 6025542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 14425381 - 14425294
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaat 106  Q
    ||||||| |||||||||| |||||| |||||||||||||| |||||||| |||| ||| | ||||||||||||||||||||| |||||    
T  14425381 agaagaaagactcgtcaagacaagtcgaaaaagggagaagggaggaaaagcacaggaatcatcaactgtgaatttcggtgtacagaat 14425294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 3034202 - 3034279
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  3034202 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 3034279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 3693177 - 3693254
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  3693177 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 3693254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 8223491 - 8223568
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  8223491 agaagaaagactcgtcaacacaagtcaaagaagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcgg 8223568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 8883729 - 8883806
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  8883729 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 8883806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 8888489 - 8888566
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  8888489 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 8888566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 14438211 - 14438134
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  |||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  14438211 agaaggacttgtcaacacaagtcgaaggagggagaagagaagaaaaacacaggaagcatcaactgtgaatttcggtgt 14438134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 18467796 - 18467873
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||| |||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  18467796 agaatgacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 18467873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 32473535 - 32473458
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||| |||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  32473535 agaatgacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 32473458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 16749458 - 16749378
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  16749458 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 16749378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 18350313 - 18350233
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| |||||||||| ||||| ||||||||| ||||||||||    
T  18350313 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaaacacaggaagcatcaactgtgtatttcggtgt 18350233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 19776441 - 19776521
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  19776441 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 19776521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 10585725 - 10585647
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    |||| |||| |||||||||||| |||  ||||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  10585725 agaacgacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaattttggtgta 10585647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 3673145 - 3673222
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  3673145 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcagtgt 3673222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 8070238 - 8070315
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  8070238 agaagaacttgtcaacacaagtcgaatgagggagaagagaggaaaaatacaggaagcatcaactgtgaatttcggtgt 8070315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 8197008 - 8197085
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||||||||||  || ||||||||| ||||||||| |||| ||||| |||||||||||||||||    
T  8197008 agaagaaagactcgtcaacacaagtcaaagaagggagaaaagaggaaaagcacaggaagcatcaactgtgaatttcgg 8197085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 18472590 - 18472667
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||||  ||||||||||| |||  ||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  18472590 agaaggacttatcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcattaactgtgaatttcggtgt 18472667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 26707018 - 26707147
Alignment:
Q  20 gaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaac 119  Q
    |||||| ||||  ||||||||||| |||| |||| |||||||||||||  ||| ||| | ||||| ||   ||||||||||||||||||||||| ||| |    
T  26707018 gaagaatgacttctcaacacaagtcgaaacagggcgaagagaggaaaagtacaggaaacatcaacggtatttttcggtgtaaagaataagtgaggcaacc 26707117  T
Q  120 tctcattttatatgaagagttcgtaacaaa 149  Q
    |||| ||||||| | ||| |||||||||||    
T  26707118 tctctttttataggtagacttcgtaacaaa 26707147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 4106864 - 4106784
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  4106864 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 4106784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 4110716 - 4110636
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  4110716 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 4110636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 9707129 - 9707049
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||||||||| |||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  9707129 agaagaaagactcgtcaacccaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 9707049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 14671949 - 14672029
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| || ||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  14671949 agaagaaagattcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 14672029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 15965611 - 15965691
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  15965611 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 15965691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 15969535 - 15969615
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  15969535 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 15969615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 15973459 - 15973539
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  15973459 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 15973539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 37439096 - 37439021
Alignment:
Q  21 aagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||| |||||||||||||||||  ||| |||||||||||| ||||| |||||||||  |||||||||||||||||    
T  37439096 aagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacatgaagtatcaactgtgaatttcgg 37439021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 20810614 - 20810751
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||| ||||||| ||||||||| |||   |||||||||||||||   |||| ||| | ||||||| ||| || ||||| |||||| || | |    
T  20810614 gaagcagaagaatgactcgttaacacaagtcgaa---gggagaagagaggaatcgcacaggaatcatcaactgcgaaatttggtgtgaagaatgaggggg 20810710  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaacg 154  Q
     | | ||||| ||||||| ||||||||||||||||||||||    
T  20810711 gcgagctctccttttataggaagagttcgtaacaaaaaacg 20810751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 29792 - 29864
Alignment:
Q  27 gactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||||| |||||| ||| ||||||||||||||||||| |||| ||| | ||| ||||||||||||||||    
T  29792 gactcgtcaagacaagtcgaagaagggagaagagaggaaaagcacaggaatcatcatctgtgaatttcggtgt 29864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 8488928 - 8488848
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| |||||||| | |||||||||    
T  8488928 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtaactttcggtgt 8488848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 18699316 - 18699236
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||| ||||||||||||  ||| |||||||||||| ||||| |||| ||||| |||| |||||||||||||||    
T  18699316 agaagaaagacttgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaagtgtgaatttcggtgt 18699236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 22758718 - 22758638
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| |||||   || ||||| ||||||||||||||||||||    
T  22758718 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagtgcaagaagcatcaactgtgaatttcggtgt 22758638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 25023768 - 25023633
Alignment:
Q  21 aagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaact 120  Q
    ||||||||||||||||||  | | |||||||||||||||||||||||||| | ||| |   |||||||||||||| ||||  |||| |||| | | | ||    
T  25023768 aagaaggactcgtcaaca--actcgaaaaagggagaagagaggaaaaacataggaaacactaactgtgaatttcgatgtactgaatgagtggggcgagct 25023671  T
Q  121 ctcattttatatgaagagttcgtaacaaaaaacggagt 158  Q
    ||| ||||||| | |||| || ||||||||| ||||||    
T  25023670 ctccttttatagggagagctcataacaaaaatcggagt 25023633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 26962334 - 26962437
Alignment:
Q  51 gggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaactctcattttatatgaagagttcgtaacaaaa 150  Q
    |||||||||||||||||||||| ||| | || | |||||||||  |||||||||   |||| | | | ||||| ||||||| |||||||| |||||||||    
T  26962334 gggagaagagaggaaaaacacaggaatcatcgattgtgaattttagtgtaaagatggagtggggcgagctctccttttataggaagagtttgtaacaaaa 26962433  T
Q  151 aacg 154  Q
    ||||    
T  26962434 aacg 26962437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 38436811 - 38436674
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    ||||||||||||  |||||| ||||||||| |    ||||||||||||||||   |||| ||| | || |||||||| |||||||| |||||| || | |    
T  38436811 gaagcagaagaacaactcgttaacacaagtcg---gagggagaagagaggaatcgcacaggaatcatcgactgtgaaattcggtgtgaagaatgaggggg 38436715  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaacg 154  Q
     | | ||||| ||||||| || |||||||||||||||||||    
T  38436714 gcgagctctccttttataggaggagttcgtaacaaaaaacg 38436674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 45904080 - 45904002
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||| ||| ||||||||||||  ||  |||||||||||||||||| |||| ||| | | |||||||||||||||||||    
T  45904080 agaagaacttgtcaacacaagtacaaggagggagaagagaggaaaagcacaggaaacattaactgtgaatttcggtgta 45904002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 53358660 - 53358724
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagagg-aaaaacacatgaagcctcaact 85  Q
    |||| ||||||| ||||||||| |||  |||||||||||||| ||||||||||||||| ||||||    
T  53358660 agaatgactcgttaacacaagtcgaaggagggagaagagaggaaaaaacacatgaagcatcaact 53358724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 43888639 - 43888580
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagc 78  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| |||||    
T  43888639 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagc 43888580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 1688737 - 1688651
Alignment:
Q  20 gaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaat 106  Q
    |||||| ||||| |||| ||||||  ||| ||||||||||||||||||||| |  |||| ||| |||||  ||| ||||||||||||    
T  1688737 gaagaaagactcatcaatacaagtcaaaagagggagaagagaggaaaaacataaaaagcatcatctgtgtttttaggtgtaaagaat 1688651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 53119770 - 53119859
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaat 106  Q
    |||||||||||| ||||||| ||||||||| |   ||||||||||||| |||   |||||||| | || |||||| | |||||||||||||||    
T  53119770 gaagcagaagaacgactcgttaacacaagtcg---aagggagaagagaagaatcgcacatgaatcatcgactgtggaattcggtgtaaagaat 53119859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 757888 - 757836
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  757888 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 757836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 2207323 - 2207271
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  2207323 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 2207271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 3419560 - 3419612
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  3419560 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 3419612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 6595898 - 6595857
Alignment:
Q  52 ggagaagagaggaaaaacacatgaagcctcaactgtgaattt 93  Q
    ||||||||||||||||||||| ||||| |||||| |||||||    
T  6595898 ggagaagagaggaaaaacacaggaagcatcaactatgaattt 6595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 7570740 - 7570688
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  7570740 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 7570688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 20520528 - 20520580
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  20520528 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 20520580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 23660988 - 23660936
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  23660988 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 23660936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 23665647 - 23665595
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  23665647 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 23665595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 24037895 - 24037843
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  24037895 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 24037843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 47408645 - 47408686
Alignment:
Q  27 gactcgtcaacacaagttgaaaaagggagaagagaggaaaaa 68  Q
    ||||||||||||||||| |||  |||||||||||||||||||    
T  47408645 gactcgtcaacacaagtcgaaggagggagaagagaggaaaaa 47408686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 27604998 - 27604946
Alignment:
Q  20 gaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacaca 72  Q
    ||||||||||||  |||||||||| |||| |||| ||||||||||||| ||||    
T  27604998 gaagaaggactcaccaacacaagtcgaaagagggggaagagaggaaaatcaca 27604946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 51922890 - 51922970
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||||||||| || ||  ||| |||||||||||| ||||  |||  ||| | ||||||||||||||||||||    
T  51922890 agaagaaagactcgtcaacgcaggtcaaaagagggagaagagaagaaaggcacgggaatcatcaactgtgaatttcggtgt 51922970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 55326350 - 55326401
Alignment:
Q  10 agatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    |||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  55326350 agatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 55326401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 33848254 - 33848457
Alignment:
Q  21 aagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaact 120  Q
    |||||||||||| |||||||||| ||||||  | || |||||||||| |||| ||| |||||||||||||||||||||||||||||||||||| | | ||    
T  33848254 aagaaggactcgacaacacaagtcgaaaaaaagggaggagaggaaaagcacaagaa-cctcaactgtgaatttcggtgtaaagaataagtgaggcgagct 33848352  T
Q  121 ctcattttatatgaagagtt-cgtaacaaaaaacggagtatttaaatggattaactctaaaacaaaccgcgtttgttttcgtgtgtggatatatccggaa 219  Q
    ||| ||||||| | |||||| ||||||||||||||||||  || || |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33848353 ctccttttatagggagagtttcgtaacaaaaaacggagtgatttaagggattaactctaaaacaaaccgtgtttgttttcgtgtgtggatatatccggaa 33848452  T
Q  220 ccttc 224  Q
    |||||    
T  33848453 ccttc 33848457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 4237876 - 4237800
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtg 98  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  4237876 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtg 4237800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 4242615 - 4242539
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtg 98  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  4242615 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtg 4242539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 21384300 - 21384380
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  21384300 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 21384380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 21387720 - 21387800
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  21387720 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 21387800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 21411579 - 21411659
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| ||||| |||||| ||||| |||||||||| ||||||||||||||||||||    
T  21411579 agaagaaagactcgtcaacacaagtcaaaagagggaaaagagaagaaaagcacatgaagcatcaactgtgaatttcggtgt 21411659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 21806071 - 21806151
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| ||||| |||||| ||||| |||||||||| ||||||||||||||||||||    
T  21806071 agaagaaagactcgtcaacacaagtcaaaagagggaaaagagaagaaaagcacatgaagcatcaactgtgaatttcggtgt 21806151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 23915048 - 23915128
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  23915048 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 23915128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 25367511 - 25367443
Alignment:
Q  32 gtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  25367511 gtcaacacaagtcgaaggagggagaagagaggaaaaacacatgaagcatcaattgtgaatttcggtgta 25367443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 22104231 - 22104318
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaat 106  Q
    ||||||| |||||||||| |||||| |||||||||||||| |||||||| |||| ||| | |||| |||||||||||||||| |||||    
T  22104231 agaagaaagactcgtcaagacaagtcgaaaaagggagaagggaggaaaagcacaggaatcatcaaatgtgaatttcggtgtacagaat 22104318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 8330898 - 8330820
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||||| ||| |||||||| |||  |||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  8330898 agaaggacttgtcgacacaagtcgaaggagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcggtgta 8330820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 34818241 - 34818163
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||||| |||||||||||| |||  | |||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  34818241 agaaggacttgtcaacacaagtcgaaggatggagaagagaggaaaagcacaggaagcatcaactgtgaatttcggtgta 34818163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 43302219 - 43302146
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcg 95  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||||| | ||||| ||||||||||||||||    
T  43302219 agaaggacttgtcaacacaagtcgaatgagggagaagagaggaaaaacataggaagcatcaactgtgaatttcg 43302146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 4582834 - 4582754
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||| ||||| |||||||||| ||||| ||||||||| ||||||||||    
T  4582834 agaagaaagactcgtcaacacaagtcaaaagagggaggagagaagaaaaacacaggaagcatcaactgtgtatttcggtgt 4582754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 18862108 - 18862028
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  18862108 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 18862028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 21827477 - 21827397
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  21827477 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 21827397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 37772265 - 37772344
Alignment:
Q  22 agaaggactcgtcaacac-aagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    |||| |||| |||||||| |||| |||  ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  37772265 agaacgacttgtcaacaccaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgta 37772344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 16066758 - 16066675
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaag---agaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||||||||||||||| |||| |||||||||   ||| |||||| ||| ||||| ||||||||||||||||||||    
T  16066758 agaagaaagactcgtcaacacaagtcgaaagagggagaagagaagaagaaaaatacaggaagcatcaactgtgaatttcggtgt 16066675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 19393269 - 19393192
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||| | ||| ||||||||||||| ||||| |||| ||||| |||||||||||||||||    
T  19393269 agaagaaagactcgtcaagacaaatcgaagaagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcgg 19393192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 31449400 - 31449323
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||| ||| ||||||||||||  ||  |||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  31449400 agaagaacttgtcaacacaagtcaaaggagggagaagagaggaaaaacacagaaagcatcaactgtgaatttcggtgt 31449323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 31030771 - 31030908
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||| ||||||| ||||||||| |||   |||||||||||||||   |||| ||| | || ||| || | ||||||||||||||| || | |    
T  31030771 gaagcagaagaatgactcgttaacacaagtcgaa---gggagaagagaggaattgcacaggaatcatcgactatggaattcggtgtaaagaatgaggggg 31030867  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaacg 154  Q
     | | ||||| ||||||| || |||||||||||||||||||    
T  31030868 gcgagctctccttttataggaggagttcgtaacaaaaaacg 31030908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 25733703 - 25733623
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||||||||||||| |  ||| |||||||||| | |||||  ||| ||||| ||||||||||||||||||||    
T  25733703 agaagaaagactcgtcaacacaaatcaaaagagggagaagacaagaaaagtacaggaagcatcaactgtgaatttcggtgt 25733623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 19566410 - 19566540
Alignment:
Q  21 aagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaact 120  Q
    ||||| ||||||| ||||||||| |||   |||||||||||||||   |||||||| | ||||||| ||| |||| |||||||||| || | | | | ||    
T  19566410 aagaatgactcgttaacacaagtcgaa---gggagaagagaggaatcgcacatgaatcatcaactgcgaaattcgatgtaaagaatgaggggggcgagct 19566506  T
Q  121 ctcattttatatgaagagttcgtaacaaaaaacg 154  Q
    ||| ||||||| || |||||| ||||||||||||    
T  19566507 ctccttttataggaggagttcataacaaaaaacg 19566540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 33616579 - 33616442
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||| ||||||| ||||||||| |   ||||||||| |||||||   |||| ||| | || |||||| | ||||||||||||||| || | |    
T  33616579 gaagcagaagaatgactcgttaacacaagtcg---aagggagaaaagaggaatcgcacaagaatcatcgactgtggaattcggtgtaaagaatgaggggg 33616483  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaacg 154  Q
     | | ||||| ||||||| || |||||| ||||||||||||    
T  33616482 gcgagctctccttttataggaggagttcataacaaaaaacg 33616442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 19430261 - 19430391
Alignment:
Q  21 aagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaact 120  Q
    ||||| ||||||| ||||||||| |||   |||||||||||||||   |||| ||| | ||||||| ||| |||| |||||||||| || | | | | ||    
T  19430261 aagaatgactcgttaacacaagtcgaa---gggagaagagaggaatcgcacaggaatcatcaactgcgaaattcgatgtaaagaatgaggggggcgagct 19430357  T
Q  121 ctcattttatatgaagagttcgtaacaaaaaacg 154  Q
    ||| ||||||| || |||||| ||||||||||||    
T  19430358 ctccttttataggaggagttcataacaaaaaacg 19430391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 33417101 - 33417154
Alignment:
Q  8 tgagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    |||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  33417101 tgagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 33417154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 17020923 - 17020975
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| || ||||||||||||||  |||||||||||||||||    
T  17020923 gagatgaag-agaagaaagaatcgtcaacacaagtcaaaaaagggagaagagag 17020975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 17551360 - 17551412
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| || ||||||||||||||  |||||||||||||||||    
T  17551360 gagatgaag-agaagaaagaatcgtcaacacaagtcaaaaaagggagaagagag 17551412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 38181766 - 38181714
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  38181766 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 38181714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 19167219 - 19167270
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagaga 61  Q
    ||||||||| ||||||| |||||||||||||||||  | ||||||||||||||    
T  19167219 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagaga 19167270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 3902513 - 3902652
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||| |||| |    
T  3902513 gaagcagaagaatgactcgtcaacacaagtcgaagaagggagaagagaggaaaaacacatgaatcatcaactgtgaatttcagtgtaaagaatgagtgcg 3902612  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaacg 154  Q
       ||||||| ||||||| | ||||||||||||||||||||    
T  3902613 -ggaactctccttttataggcagagttcgtaacaaaaaacg 3902652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 11956554 - 11956419
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaa 118  Q
    |||||||||||||||||||| | || |||| |||||||||||||||||| |||| ||| | ||||||||||||||||||||||||||| |||| |   |     
T  11956554 agaagaaggactcgtcaacatacgtcgaaagagggagaagagaggaaaagcacaggaatcatcaactgtgaatttcggtgtaaagaatgagtggggagag 11956455  T
Q  119 ctctcattttatatgaagagttcgtaacaaaaaacg 154  Q
    ||||| ||||||| | ||||||||||||||||||||    
T  11956454 ctctccttttataggtagagttcgtaacaaaaaacg 11956419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 3902155 - 3902292
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||| ||||||||||||||| | |||  ||||||||||||||||||||||||||| | |||| |||||||||| ||||||||||| |||| |    
T  3902155 gaagcagaagaatgactcgtcaacacaattcgaaggagggagaagagaggaaaaacacatgaatcatcaattgtgaatttcagtgtaaagaatgagtg-g 3902253  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaa 152  Q
       ||||||| ||||||| | ||||||||||||||||||    
T  3902254 gggaactctccttttataggcagagttcgtaacaaaaaa 3902292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 5600821 - 5600690
Alignment:
Q  20 gaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaac 119  Q
    ||||||||| | ||||||||||||  ||| || |||||||||||||||||||  ||||| |||| | |||||||||| |||||||||||||||| ||| |    
T  5600821 gaagaaggatttgtcaacacaagtctaaacagagagaagagaggaaaaacactggaagcatcaattatgaatttcggagtaaagaataagtgaggcaagc 5600722  T
Q  120 tctcattttatatgaagagttcgtaacaaaaa 151  Q
    |||| ||||||| | |||||| ||||||||||    
T  5600721 tctccttttatagggagagtttgtaacaaaaa 5600690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 29325778 - 29325915
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||||||||||||||||||||| |||  |||||||| ||| ||||| |||| ||| | |||||| |||||||||||||||||||| |||| |    
T  29325778 gaagcagaagaaggactcgtcaacacaagtcgaaggagggagaatagacgaaaagcacaggaatcatcaactatgaatttcggtgtaaagaatgagtg-g 29325876  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaa 152  Q
       | ||||| ||||||| |  |||||||||||||||||    
T  29325877 gggagctctccttttataggctgagttcgtaacaaaaaa 29325915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 17964070 - 17963993
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  17964070 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 17963993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 19772550 - 19772470
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  19772550 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacatgaagcatcaactgtgaatttcggtgt 19772470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 27324597 - 27324517
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||| ||||||  ||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  27324597 agaagaaagactcgtcaatacaagtcaaaagagggagaagagaagaaaaacacaggaagcatcaactgtgaatttcggtgt 27324517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 14073691 - 14073768
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||| ||| | | |||||||||||||||    
T  14073691 agaagaaagactcgtcaacacaagtcgaagaagggagaagagaggaaaagcacaagaatcatgaactgtgaatttcgg 14073768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 26981151 - 26981228
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||||| ||||||||||||||||| ||||| |||| ||||| ||||||||| |||||||    
T  26981151 agaagaaagactcgtcaagacaagtcgaaaaagggagaagagaagaaaagcacaggaagcatcaactgtgtatttcgg 26981228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 2077368 - 2077448
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| || ||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  2077368 agaagaaagactcgtcaacacaagtcaaaagagagagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 2077448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 15704448 - 15704369
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| |||||||||| ||||| |||||||||||| |||||||    
T  15704448 agaagaaagactcgtcaacacaagtc-aaagagggagaagagaagaaaaacacaggaagcatcaactgtgaatctcggtgt 15704369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 16624972 - 16625052
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||||||||||||| |  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  16624972 agaagaaagactcgtcaacacaattcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 16625052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 16760938 - 16761018
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  16760938 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 16761018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 22806907 - 22806987
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  22806907 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 22806987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 22949788 - 22949868
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  22949788 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 22949868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 22953744 - 22953824
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  22953744 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 22953824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 23872232 - 23872312
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  23872232 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 23872312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 23876188 - 23876268
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  23876188 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 23876268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 6112292 - 6112217
Alignment:
Q  24 aaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||||||||||  ||  |||||||||||||||||| |||| ||||| ||||||||||||||||||||    
T  6112292 aaggacttgtcaacacaagtcaaatgagggagaagagaggaaaagcacaagaagcatcaactgtgaatttcggtgt 6112217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 17281416 - 17281283
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    ||||||||||||  |||||| ||||||||| |||   |||||||| |||||||| |||| ||||| |||||| ||||||||||||| |||||| |||| |    
T  17281416 gaagcagaagaa--actcgttaacacaagtcgaa---gggagaagggaggaaaagcacaggaagcatcaactatgaatttcggtgttaagaatgagtggg 17281322  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaa 152  Q
       | ||||| ||||||| | |||||| |||||||||||    
T  17281321 gtgagctctccttttatagggagagtttgtaacaaaaaa 17281283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 8748343 - 8748421
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagagg-aaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  |||||||||||||| |||||| || ||||| |||| |||||||||||||||    
T  8748343 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaaacccaagaagcatcaattgtgaatttcggtgt 8748421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 18387488 - 18387558
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtga 89  Q
    ||||||| |||||||||||| |||| ||| ||||||||||||||||||| |||| ||| | ||||||||||    
T  18387488 agaagaaagactcgtcaacagaagtcgaagaagggagaagagaggaaaagcacaggaatcatcaactgtga 18387558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 27073541 - 27073618
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| ||||| |||| |||||| ||||||||||||||||| ||||| |||| ||| | ||||||||| |||||||    
T  27073541 agaagaaagactcatcaagacaagtcgaaaaagggagaagagaagaaaagcacaggaaacatcaactgtgtatttcgg 27073618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 10642958 - 10643013
Alignment:
Q  21 aagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaa 76  Q
    ||||||||||||| |||||||||  ||||||| |||||||||||||| ||||||||    
T  10642958 aagaaggactcgttaacacaagtcaaaaaaggaagaagagaggaaaagcacatgaa 10643013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 24588714 - 24588636
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagagg-aaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||||  | ||||||||| |||  |||||||||||||| ||||||| | ||||| ||||||||||||||||||||    
T  24588714 agaaggacttcttaacacaagtcgaaggagggagaagagagggaaaaacataggaagcatcaactgtgaatttcggtgt 24588636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 2699617 - 2699565
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  |||||||||||||||||    
T  2699617 gagatgaag-agaagaaagactcgtcaacacaagtcaaaaaagggagaagagag 2699565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 31477242 - 31477162
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||| ||||||||  ||| |||||||||||| ||||| || |  |||| |||||||||||||| |||||    
T  31477242 agaagaaagactcgtcgacacaagtcaaaagagggagaagagaagaaaagcaaagaaagcatcaactgtgaattttggtgt 31477162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 5600655 - 5600607
Alignment:
Q  177 taaaacaaaccgcgtttgttttcgtg--tgtggatatatccggaacctt 223  Q
    ||||||||||| |||||||||||| |  |||||||||||||||||||||    
T  5600655 taaaacaaaccacgtttgttttcgcgcgtgtggatatatccggaacctt 5600607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 6407385 - 6407333
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  6407385 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 6407333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 19478390 - 19478514
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||| ||||||| ||||||| ||||||||| |||   || ||||||||||||  ||||| ||| | ||||||| ||| |||||||| |||||| || | |    
T  19478390 gaagtagaagaatgactcgttaacacaagtcgaa---ggaagaagagaggaatcacacaggaatcatcaactgcgaaattcggtgtgaagaatgaggggg 19478486  T
Q  114 acaaactctcattttatatgaagagttc 141  Q
     | | ||||| ||||||| |||||||||    
T  19478487 gcgagctctccttttataggaagagttc 19478514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 30564264 - 30564129
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaa 118  Q
    |||||||| ||| |||||||||||| |||  ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||| ||| |     
T  30564264 agaagaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacatgaatcatcaactgtgaatttcggtgtaaagaatgagtgggacgag 30564165  T
Q  119 ctctcattttatatgaagagttcgtaacaaaaaacg 154  Q
    ||||| ||||||| | ||||||||||||||||||||    
T  30564164 ctctccttttatagggagagttcgtaacaaaaaacg 30564129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 10318631 - 10318491
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||| ||||| | | ||||||||||||||||||||||||| |||  |    
T  10318631 gaagcagaagaaggactcatcaacacaagtcgaaggagggagaagagaggaaaaacaaatgaatcatgaactgtgaatttcggtgtaaagaatgagttgg 10318532  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaacg 154  Q
       | ||||| ||||||| | |||||| |||||||||||||    
T  10318531 gggagctctccttttataggcagagtttgtaacaaaaaacg 10318491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 24490274 - 24490411
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||| ||||||| ||||||||| |||   ||||||||||||||||| |||| ||| | |||||||||||||||||||| |||||| ||||      
T  24490274 gaagcagaagaatgactcgttaacacaagtcgaa---gggagaagagaggaaaagcacaagaatcatcaactgtgaatttcggtgtgaagaatgagtgga 24490370  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaacg 154  Q
     ||| ||||| ||||||| | ||||||||||||||||||||    
T  24490371 gcaagctctccttttatagggagagttcgtaacaaaaaacg 24490411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 14899154 - 14899077
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||| | |||||||||||||||||    
T  14899154 agaagaaagactcgtcaacacaagtcgaagaagggagaagagaggaaaagcacatgaatcatcaactgtgaatttcgg 14899077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 41817342 - 41817418
Alignment:
Q  23 gaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  41817342 gaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaagaagcatcaactgtgaatttcggtgt 41817418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 34560983 - 34561061
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||||| |||||||||||| |||  |||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  34560983 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcggtgta 34561061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 3997597 - 3997520
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||| |||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  3997597 agaacgacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 3997520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 5270935 - 5270858
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  |||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  5270935 agaaggacttgtcaacacaagtcgaaggagggagaagagaagaaaaacacaggaagcatcaactgtgaatttcggtgt 5270858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 5927729 - 5927652
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  5927729 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcagtgt 5927652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 14868606 - 14868529
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||| ||| | |||||||||||||||||    
T  14868606 agaagaaagactcgtcaacacaagtcgaagaagggagaagagaggaaaagcacaggaatcatcaactgtgaatttcgg 14868529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 14877328 - 14877405
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||| ||| | |||||||||||||||||    
T  14877328 agaagaaagactcgtcaacacaagtcgaagaagggagaagagaggaaaagcacaggaatcatcaactgtgaatttcgg 14877405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 15011354 - 15011274
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  15011354 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 15011274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 15225721 - 15225801
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  15225721 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 15225801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 10120434 - 10120297
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||| ||||||| ||||||||| |||   |||||||||||||||  ||||| ||| | || |||||||| ||||||||  ||||| || | |    
T  10120434 gaagcagaagaatgactcgttaacacaagtcgaa---gggagaagagaggaatcacacaggaatcatcgactgtgaaattcggtgtgtagaatgaggggg 10120338  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaacg 154  Q
     | | ||||| ||||||| ||||||||||||||||||||||    
T  10120337 gcgagctctccttttataggaagagttcgtaacaaaaaacg 10120297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 8660938 - 8660861
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||||||||||| |||| |||| ||| |||||||||||||| |||| ||||| |||||||||||| |||||||    
T  8660938 agaaggactcgtcaacagaagtcgaaagaggtagaagagaggaaaagcacaggaagcatcaactgtgaatctcggtgt 8660861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 9185222 - 9185145
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||| |||| ||| | |||||| ||||||||||    
T  9185222 agaagaaagactcgtcaagacaagtcgaaaaagggagaagagaggaaaagcacaggaatcatcaactctgaatttcgg 9185145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 9191087 - 9191010
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||| |||| ||| | |||||| ||||||||||    
T  9191087 agaagaaagactcgtcaagacaagtcgaaaaagggagaagagaggaaaagcacaggaatcatcaactctgaatttcgg 9191010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 10713496 - 10713576
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||| |||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  10713496 agaagaaagactcatcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 10713576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 10927266 - 10927346
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||| |||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  10927266 agaagaaagactcatcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 10927346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 12488354 - 12488434
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  12488354 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 12488434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 14953593 - 14953513
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  14953593 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 14953513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 18023177 - 18023257
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| || ||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  18023177 agaagaaagattcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 18023257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 25690550 - 25690630
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  25690550 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 25690630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 31728879 - 31728803
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcg 95  Q
    |||||||| ||| |||||||||||| |||  |||||||||||| |||||||||| ||||| ||||||||||||||||    
T  31728879 agaagaagaacttgtcaacacaagtcgaatgagggagaagagaagaaaaacacaggaagcatcaactgtgaatttcg 31728803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 26034744 - 26034819
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttc 94  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||| | || |||||| |||||    
T  26034744 agaagaaagactcgtcaacacaagtcgaagaagggagaagagaggaaaagcacatgaaacatcgactgtgtatttc 26034819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 8694297 - 8694374
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||||||| ||| | |||  |||||||||||||||    
T  8694297 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaatcatcatttgtgaatttcggtgt 8694374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 17359768 - 17359872
Alignment:
Q  45 gaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaactctcattttatatgaagagttcgta 144  Q
    |||| ||||||||||||| |||| |||||||| | ||||||| ||||||| |||| || |||||||||| | ||||||| |||||||   ||||||||||    
T  17359768 gaaagagggagaagagagaaaaagcacatgaaacatcaactg-gaatttcagtgtcaataataagtgaggcgaactctccttttatagtgagagttcgta 17359866  T
Q  145 acaaaa 150  Q
    ||||||    
T  17359867 acaaaa 17359872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 31766455 - 31766532
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  ||||||||||||||| ||||||| |||   ||||||||||||||||||||    
T  31766455 agaaggacttgtcaacacaagtcgaaggagggagaagagaggagaaacacaggaaatatcaactgtgaatttcggtgt 31766532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 47575221 - 47575298
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||||||| |  || |||||| |||||||||||||    
T  47575221 agaaggacttgtcaacacaagtcgaatgagggagaagagaggaaaaacacaggttgcatcaactttgaatttcggtgt 47575298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 7902646 - 7902569
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||| |||| |||||||||||| |||  ||||||||| |||||||| |||| ||||| |||| |||||||||||||||    
T  7902646 agaacgacttgtcaacacaagtcgaaggagggagaagcgaggaaaagcacaggaagcatcaaatgtgaatttcggtgt 7902569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 13521516 - 13521447
Alignment:
Q  27 gactcgtcaacacaagttgaaaaagggagaagagagga-aaaacacatgaagcctcaactgtgaatttcg 95  Q
    |||| |||||||||||| |||  ||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  13521516 gacttgtcaacacaagtcgaaggagggagaagagaggaaaaaacacaggaagcatcaactgtgaatttcg 13521447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 3258372 - 3258452
Alignment:
Q  43 ttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaactctc 123  Q
    |||||| ||||||||||||||||||||||||||| | |||| ||||  |||| |||| |||||| |||||| | |||||||    
T  3258372 ttgaaagagggagaagagaggaaaaacacatgaaacatcaaatgtgtttttcagtgtgaagaatgagtgaggcgaactctc 3258452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 10120662 - 10120527
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||| ||||||| ||||||||| |||   ||||| |||||||||  ||||| ||| | || |||| ||| ||||||||  ||||| || | |    
T  10120662 gaagcagaagaatgactcgttaacacaagtcgaa---gggagtagagaggaatcacacaggaatcatcgactgcgaaattcggtgtgtagaatgaggggg 10120566  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaa 152  Q
     | | ||||| ||||||| ||||||||||||||||||||    
T  10120565 gcgagctctccttttataggaagagttcgtaacaaaaaa 10120527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 39320121 - 39320196
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggt 97  Q
    |||||||||||| ||||||||| |||  |||||||||||||||||| ||| |||| | |||||  | |||||||||    
T  39320121 agaaggactcgttaacacaagtcgaaggagggagaagagaggaaaagcacgtgaaacatcaacgttaaatttcggt 39320196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 15451481 - 15451558
Alignment:
Q  80 tcaactgtgaatttcggtgtaaagaataagtgagacaaactctcattttatatgaagagttcgtaacaaaaaacggagt 158  Q
    ||||||||||||||| |||||  ||||||||| ||||| ||||| ||||||| | |||||| |||| ||||||| ||||    
T  15451481 tcaactgtgaatttcagtgtactgaataagtg-gacaagctctccttttatagggagagtttgtaataaaaaactgagt 15451558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 19102552 - 19102609
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaa 67  Q
    ||||||||| ||||||| |||||||||||||||||  | ||||||||||||||| ||||    
T  19102552 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaaaa 19102609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 16421613 - 16421665
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  16421613 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 16421665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 31269596 - 31269648
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  31269596 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 31269648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 31274085 - 31274137
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  31274085 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 31274137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 32221091 - 32221039
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  32221091 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 32221039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 33468527 - 33468475
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  33468527 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 33468475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 37259388 - 37259336
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  37259388 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 37259336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 37264088 - 37264036
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  37264088 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 37264036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 48276181 - 48276129
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  48276181 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 48276129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 7e-36; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 47761865 - 47762005
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||| ||||||||||||||||| |||  ||||||||||||||| || |||||||| | |||| |||||||||||||||||||||| |||| |    
T  47761865 gaagcagaagaaagactcgtcaacacaagtcgaaggagggagaagagaggagaagcacatgaatcatcaattgtgaatttcggtgtaaagaatgagtggg 47761964  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaacg 154  Q
     | | ||||||||||||| | ||||||||||||||||||||    
T  47761965 gcgagctctcattttataggcagagttcgtaacaaaaaacg 47762005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 19096810 - 19096884
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaattt 93  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  19096810 agaagaaagactcgtcaacacaagtcgaagaagggagaagagaggaaaaacacatgaagcatcaactgtgaattt 19096884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 27256796 - 27256874
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  27256796 agaaggacttgtcaacacaagttgaaggagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcggtgta 27256874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 26341791 - 26341868
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  26341791 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 26341868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 47102098 - 47102175
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  47102098 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 47102175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 40864898 - 40864820
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||||| |||||||||||| |||  |||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  40864898 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcggtgta 40864820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 8076609 - 8076686
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| ||||||||||||  ||  || |||||||||||||||||||||||||| ||||||||||||||||||||    
T  8076609 agaaggacttgtcaacacaagtctaaggagagagaagagaggaaaaacacatgaagcatcaactgtgaatttcggtgt 8076686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 20488504 - 20488584
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  20488504 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacacgaagcatcaactgtgaatttcggtgt 20488584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 36477533 - 36477613
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  36477533 agaagaaagactcgtcaacacaagtcaaaagagggagaatagaagaaaaacacaggaagcatcaactgtgaatttcggtgt 36477613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 7874947 - 7874816
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtg-aatttcggtgtaaagaataagtgagacaa 117  Q
    |||||||||||||||||||||||||  ||| ||||| ||||||||| || |||||||||  |||||||||   ||||||||| ||||||||||||| | |    
T  7874947 agaagaaggactcgtcaacacaagtcaaaagagggacaagagaggataagcacatgaagaatcaactgtgttttttcggtgtgaagaataagtgaggcga 7874848  T
Q  118 actctcattttatatgaagagttcgtaacaaa 149  Q
     ||||| ||||| | | | |||||||||||||    
T  7874847 gctctccttttaaagggaaagttcgtaacaaa 7874816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 19640858 - 19640936
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    |||| |||| |||||||||||| |||  |||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  19640858 agaatgacttgtcaacacaagtcgaaggagggagaagagaggaaaagcacaagaagcatcaactgtgaatttcggtgta 19640936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 16459919 - 16459839
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||| |||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  16459919 agaagaaagactcatcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 16459839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 16580785 - 16580861
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcg 95  Q
    ||||||| ||||| |||||||||||  ||| |||||||||||| ||||| |||||||||| ||||||||||||||||    
T  16580785 agaagaaagactcatcaacacaagtcaaaagagggagaagagaagaaaagcacatgaagcatcaactgtgaatttcg 16580861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 18426483 - 18426563
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  18426483 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 18426563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 20485151 - 20485223
Alignment:
Q  27 gactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  20485151 gactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacacgaagcatcaactgtgaatttcggtgt 20485223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 32302395 - 32302475
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||| | ||||||||||||||||||||    
T  32302395 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaaacatcaactgtgaatttcggtgt 32302475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 45169469 - 45169389
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  45169469 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 45169389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 9973703 - 9973841
Alignment:
Q  13 tgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtga 112  Q
    ||||||||||||| ||||||| ||||||||| |||   |||||||||||||||   |||||||| | ||||||| ||| |||||||| |||||| || |     
T  9973703 tgaagcagaagaatgactcgttaacacaagtcgaa---gggagaagagaggaatcgcacatgaatcatcaactgcgaaattcggtgttaagaatgagggg 9973799  T
Q  113 gacaaactctcattttatatgaagagttcgtaacaaaaaacg 154  Q
      | | ||||| ||||||| |||||||| |||||||||||||    
T  9973800 agcgagctctccttttataggaagagtttgtaacaaaaaacg 9973841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 14259562 - 14259637
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttc 94  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| |||||||||||||||    
T  14259562 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttc 14259637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 838970 - 838893
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||| ||||| |||||| ||| |||||||||||||| ||||||||| ||||| ||||| |||||||||||    
T  838970 agaagaaagacttgtcaagacaagtcgaataagggagaagagagaaaaaacacaggaagcatcaaccgtgaatttcgg 838893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 846146 - 846069
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||||| |||||||||||||||||| |||| |||| ||||| |||||  ||||||||||    
T  846146 agaagaaagactcgtcaagacaagtcgaaaaagggagaagagagaaaaagcacaggaagcatcaaccatgaatttcgg 846069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 853523 - 853446
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||||| |||||||||||||||||| |||| |||| ||||| |||||  ||||||||||    
T  853523 agaagaaagactcgtcaagacaagtcgaaaaagggagaagagagaaaaagcacaggaagcatcaaccatgaatttcgg 853446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 1204150 - 1204073
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||| ||||| |||||| ||| |||||||||||||| ||||||||| ||||| ||||| |||||||||||    
T  1204150 agaagaaagacttgtcaagacaagtcgaataagggagaagagagaaaaaacacaggaagcatcaaccgtgaatttcgg 1204073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 1211527 - 1211450
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||||| |||||||||||||||||| |||| |||| ||||| |||||  ||||||||||    
T  1211527 agaagaaagactcgtcaagacaagtcgaaaaagggagaagagagaaaaagcacaggaagcatcaaccatgaatttcgg 1211450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 8954805 - 8954728
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||||| ||| |||||||||||||| ||||  ||||||||| ||||||| |||||||||    
T  8954805 agaagaaagactcgtcaagacaagtcgaagaagggagaagagagaaaaagtacatgaagcatcaactgggaatttcgg 8954728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 14928174 - 14928094
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||||| |||||||||  ||| ||| |||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  14928174 agaagaaagactcgttaacacaagtcaaaagaggaagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 14928094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 15351640 - 15351560
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||||| |||||||||  ||| ||| |||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  15351640 agaagaaagactcgttaacacaagtcaaaagaggaagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 15351560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 33226591 - 33226726
Alignment:
Q  16 agcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagac 115  Q
    |||||||||| ||||||| ||||||||| |||   |||||||||||||||   |||| ||| | || |||||| | ||||||||||||||| || | | |    
T  33226591 agcagaagaacgactcgttaacacaagtcgaa---gggagaagagaggaatcgcacaggaatcatcgactgtggaattcggtgtaaagaatgaggggggc 33226687  T
Q  116 aaactctcattttatatgaagagttcgtaacaaaaaacg 154  Q
     | ||||| ||||||| || |||||||||||||||||||    
T  33226688 gagctctccttttataggaggagttcgtaacaaaaaacg 33226726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 9650491 - 9650422
Alignment:
Q  27 gactcgtcaacacaagttgaaaaagggagaagagagga-aaaacacatgaagcctcaactgtgaatttcg 95  Q
    |||| |||||||||||| |||  ||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  9650491 gacttgtcaacacaagtcgaaggagggagaagagaggaaaaaacacaggaagcatcaactgtgaatttcg 9650422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 29727329 - 29727262
Alignment:
Q  32 gtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||||||| |||  || ||||||||||||||| |||| ||| | |||||||||||||| |||||    
T  29727329 gtcaacacaagtcgaaggagagagaagagaggaaaagcacaggaaacatcaactgtgaattttggtgt 29727262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 8268866 - 8268919
Alignment:
Q  8 tgagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    |||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  8268866 tgagatgaag-agaagaaagactcgtcaacacaagtcaacaaagggagaagagag 8268919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 44509909 - 44509831
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagagga-aaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  || |||||||||||| |||||||| ||| | ||||| ||||||||| ||||    
T  44509909 agaaggacttgtcaacacaagtcgaaggagagagaagagaggaaaaaacacaggaaacatcaaccgtgaatttcagtgt 44509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 12799958 - 12800010
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  12799958 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 12800010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 42626112 - 42626060
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  42626112 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 42626060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 30258674 - 30258725
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagaga 61  Q
    ||||||||| ||||||| |||||||||||||||||  | ||||||||||||||    
T  30258674 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagaga 30258725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 31986971 - 31987101
Alignment:
Q  20 gaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaac 119  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||||||| ||| | ||||||||||| ||||| |||||||||||||||| | | |    
T  31986971 gaagaaggactcgacaacacaagtcgaaagagggagaagagaggaaaaacacaagaaacatcaactgtgaacttcggcgtaaagaataagtgaggcgagc 31987070  T
Q  120 tctcattttatatgaagagttcgtaacaaaa 150  Q
    |||| |||||||   ||||||||||||||||    
T  31987071 tctccttttatagtgagagttcgtaacaaaa 31987101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 29167487 - 29167407
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||||||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  29167487 agaagaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 29167407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 32461079 - 32461001
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  32461079 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgta 32461001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 26869852 - 26869765
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaat 106  Q
    ||||||| |||||||||| ||||||  || ||||||||||||||||||| |||| ||||| ||||||||||||||||||||| |||||    
T  26869852 agaagaaagactcgtcaagacaagtataagaagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcggtgtacagaat 26869765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 36941800 - 36941722
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  36941800 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgta 36941722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 557255 - 557332
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  557255 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 557332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 562027 - 562104
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  562027 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 562104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 12044670 - 12044593
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  12044670 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactttgaatttcggtgt 12044593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 13301025 - 13300948
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||| |||| |||||||||||| |||  |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  13301025 agaacgacttgtcaacacaagtcgaaggagggagaagagaggaaaagcacatgaagcatcaactgtgaatttcggtgt 13300948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 21826779 - 21826856
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||| |||| ||| | |||||||||||||||||    
T  21826779 agaagaaagactcgtcaagacaagtcgaaaaagggagaagagaggaaaagcacaggaatcatcaactgtgaatttcgg 21826856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 36937046 - 36936969
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  36937046 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 36936969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 10754006 - 10754086
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  10754006 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 10754086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 6154945 - 6154867
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagag-aggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||| ||||||||||| || ||||||||| ||||| ||||||||||||||||||||    
T  6154945 agaaggacttgtcaacacaagtcgaaagagggagaagagaagaaaaaacacaggaagcatcaactgtgaatttcggtgt 6154867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 31732096 - 31732174
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    |||| |||| |||||||||||| |||  |||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  31732096 agaacgacttgtcaacacaagtcgaaggagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcggtgta 31732174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 8770810 - 8770879
Alignment:
Q  30 tcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||||||||||||  |||||||| |||||||||||||| ||||| ||||||||||||||| ||||    
T  8770810 tcgtcaacacaagttgaaggagggagaatagaggaaaaacacaggaagcatcaactgtgaatttcagtgt 8770879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 26667874 - 26667939
Alignment:
Q  34 caacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  26667874 caacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 26667939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 26939471 - 26939536
Alignment:
Q  34 caacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  26939471 caacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 26939536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 36430195 - 36430272
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  ||||| ||||||||||||||||| ||||| |||||| |||||||||||||    
T  36430195 agaaggacttgtcaacacaagtcgaaggagggaaaagagaggaaaaacacaggaagcatcaactatgaatttcggtgt 36430272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 41997223 - 41997300
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| ||||||||||||  ||  |||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  41997223 agaaggacttgtcaacacaagtcaaaggagggagaagagaagaaaaacacaggaagcatcaactgtgaatttcggtgt 41997300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 42001992 - 42002069
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| ||||||||||||  ||  |||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  42001992 agaaggacttgtcaacacaagtcaaaggagggagaagagaagaaaaacacaggaagcatcaactgtgaatttcggtgt 42002069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 7452337 - 7452411
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||||| ||| |||||||| |||  |||||||||||| |||||||||| ||||| |||||||||||||||||    
T  7452337 agaaggacttgtccacacaagtcgaaggagggagaagagaagaaaaacacaggaagcatcaactgtgaatttcgg 7452411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 21323511 - 21323433
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||||| |||||| ||||| |||  ||||||||||||||||||  ||| ||||| |||||||||||||||||||||    
T  21323511 agaaggacttgtcaacccaagtcgaaggagggagaagagaggaaaagtacaggaagcatcaactgtgaatttcggtgta 21323433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 36424222 - 36424299
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||| |||| |||||||||||| |||  |||||||||||||||||||||||  || | ||||||||||||||||||||    
T  36424222 agaatgacttgtcaacacaagtcgaatgagggagaagagaggaaaaacacagaaaacatcaactgtgaatttcggtgt 36424299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 41096954 - 41097034
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| | ||||||| ||||||||||    
T  41096954 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcattaactgtgtatttcggtgt 41097034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 3666474 - 3666549
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  ||||||||||||| ||||||||| ||||| ||||  ||||||||||||||    
T  3666474 agaaggacttgtcaacacaagtcgaatgagggagaagagagaaaaaacacaagaagcatcaa--gtgaatttcggtgt 3666549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 37549663 - 37549587
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  | |||||||||| |||||||||| ||| | ||||||||||||||| ||||    
T  37549663 agaaggacttgtcaacacaagtcgaaggaaggagaagagatgaaaaacacaggaa-cgtcaactgtgaatttcagtgt 37549587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 12103599 - 12103651
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  12103599 gagatgaag-agaagaaagactcgtcaacacaagtcaataaagggagaagagag 12103651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 37652461 - 37652385
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  | |||||||||| |||||||||| ||| | ||| ||||||||||| ||||    
T  37652461 agaaggacttgtcaacacaagtcgaaggaaggagaagagatgaaaaacacaggaa-cgtcagctgtgaatttcagtgt 37652385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 40148470 - 40148521
Alignment:
Q  10 agatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    |||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  40148470 agatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 40148521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 44683350 - 44683444
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    ||||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||| |||||||| |||||||| |||||| |||||||||    
T  44683350 agaagaaggactcgtcaacacaagtcgaaaaagaaagaagagaggaaaaacacaagaagcatcaactgtcaatttcggggtaaaggataagtgag 44683444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 27556814 - 27556944
Alignment:
Q  21 aagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaact 120  Q
    ||||| ||||||||||||||||| |||||||| | |||||||||||| |||||||||| |||||||||||||| || |||||  ||||||||| | | ||    
T  27556814 aagaacgactcgtcaacacaagtcgaaaaaggaaaaagagaggaaaagcacatgaagcatcaactgtgaattttggggtaaaagataagtgaggcgagct 27556913  T
Q  121 ctcattttatatgaagagttcgtaacaaaaa 151  Q
    ||| |||| ||   |||||||||||||||||    
T  27556914 ctccttttctagcgagagttcgtaacaaaaa 27556944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 10160258 - 10160178
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||||||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  10160258 agaagaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 10160178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 17968477 - 17968396
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||| |||| |||||||||||| |||  ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  17968477 agaagaaagacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgta 17968396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 18344995 - 18345072
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  18344995 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 18345072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 24286432 - 24286355
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  24286432 agaagaaagactcgtcaacacaagtcgaagaagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcgg 24286355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 24293000 - 24292923
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  24293000 agaagaaagactcgtcaacacaagtcgaagaagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcgg 24292923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 377820 - 377748
Alignment:
Q  27 gactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||||||||||| |||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  377820 gactcgtcaacacaagtcgaaagagggagaagagaagaaaaacacaggaagcatcaactgtgaatttcggtgt 377748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 23068291 - 23068211
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  23068291 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 23068211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 5771176 - 5771271
Alignment:
Q  20 gaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagac 115  Q
    |||||||||||| ||||||||||| ||||  ||||||||||||||||| |||| ||||| || ||||||  |||||||||  ||||||||||||||    
T  5771176 gaagaaggactcatcaacacaagtcgaaagggggagaagagaggaaaagcacacgaagcatctactgtgtttttcggtgtgcagaataagtgagac 5771271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 6297427 - 6297344
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaa 105  Q
    ||||||| | |||||||||||| |||  |||||||||||||||||| |||||||||| ||||||||||||||| ||||| ||||    
T  6297427 agaaggatttgtcaacacaagtcgaaggagggagaagagaggaaaagcacatgaagcatcaactgtgaatttctgtgtatagaa 6297344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 6856753 - 6856831
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggt 97  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||    
T  6856753 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggt 6856831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 1284070 - 1284150
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  1284070 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 1284150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 30344454 - 30344374
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  30344454 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 30344374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 22844959 - 22845034
Alignment:
Q  20 gaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcg 95  Q
    |||||||||||| |||||||||||  ||  ||||||||||||||||||||||| ||||| |||| |||||||||||    
T  22844959 gaagaaggactcatcaacacaagtcaaaggagggagaagagaggaaaaacacaagaagcatcaattgtgaatttcg 22845034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 9785714 - 9785786
Alignment:
Q  27 gactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||||||||||||  ||| ||||||||||||  |||| |||| ||||| ||||||||||||||||||||    
T  9785714 gactcgtcaacacaagtcaaaagagggagaagagaataaaagcacaggaagcatcaactgtgaatttcggtgt 9785786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 42248783 - 42248863
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| |||| |||| ||||||||||    
T  42248783 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaattgtgtatttcggtgt 42248863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 7559878 - 7559815
Alignment:
Q  30 tcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaattt 93  Q
    ||||||||| ||||||||  ||||||||||||| ||||||||| ||||| ||||||||||||||    
T  7559878 tcgtcaacaaaagttgaaggagggagaagagagaaaaaacacaggaagcatcaactgtgaattt 7559815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 34069975 - 34070055
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||| ||||| ||||| |||  ||||| ||||||||| ||||||||||    
T  34069975 agaagaaagactcgtcaacacaagtcaaaagagggaggagagaagaaaagcactggaagcatcaactgtgtatttcggtgt 34070055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 19891984 - 19891921
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaact 85  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||||||| ||| | ||||||    
T  19891984 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaaacatcaact 19891921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 30658736 - 30658807
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaattt 93  Q
    ||||||| | ||||| |||||| |||  ||||||||||||||| ||||| ||||||| ||||||||||||||    
T  30658736 agaaggatttgtcaagacaagtcgaatgagggagaagagaggacaaacatatgaagcatcaactgtgaattt 30658807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 17327616 - 17327690
Alignment:
Q  20 gaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaa-aaacacatgaagcctcaactgtgaattt 93  Q
    |||||| |||||||||||||||||||||  ||| |||||||||||| ||||||| ||||  ||||||||| ||||    
T  17327616 gaagaatgactcgtcaacacaagttgaaggaggaagaagagaggaagaaacacaagaagtatcaactgtgtattt 17327690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 26897194 - 26897260
Alignment:
Q  31 cgtcaacacaagttgaaaaagggagaagagaggaaaaa-cacatgaagcctcaactgtgaatttcgg 96  Q
    |||||||||||||  || |||||||||||||| ||||| |||| ||||| |||||||||||||||||    
T  26897194 cgtcaacacaagtcaaagaagggagaagagagcaaaaagcacaggaagcatcaactgtgaatttcgg 26897260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 28855718 - 28855767
Alignment:
Q  50 agggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||||||||||||||| | ||| | ||||||||||||||||||||    
T  28855718 agggagaagagaggaaaaacataggaatcatcaactgtgaatttcggtgt 28855767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 25375445 - 25375525
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||  |||||||||||||||| |||  ||||||||||||||||||  ||  ||| | ||||||||||||||| ||||    
T  25375445 agaagaaaaactcgtcaacacaagtcgaaggagggagaagagaggaaaagtaccggaatcatcaactgtgaatttcagtgt 25375525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 5089520 - 5089654
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||| ||||||| || | |||| |||   |||||||||||||||  ||||| ||| | ||||||   || ||||||||||||||| || | |    
T  5089520 gaagcagaagaatgactcgttaaaataagtcgaa---gggagaagagaggaatcacacaggaatcatcaacttcaaaattcggtgtaaagaatgaggggg 5089616  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaa 151  Q
     | | ||||| ||||||| |||||||||||||| ||||    
T  5089617 gcgagctctccttttataggaagagttcgtaacgaaaa 5089654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 11658574 - 11658524
Alignment:
Q  174 ctctaaaacaaaccgcgtttgttttcgtgtgtggatatatccggaaccttc 224  Q
    ||||||||||||| ||||||||||||   ||||| ||||||||||||||||    
T  11658574 ctctaaaacaaactgcgtttgttttctcatgtggttatatccggaaccttc 11658524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 29678328 - 29678381
Alignment:
Q  8 tgagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    |||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  29678328 tgagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 29678381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 42914884 - 42914973
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaat 106  Q
    |||||||||||| ||||||| ||||||||| |   |||||||||||||||||   |||| ||| | ||||||| ||| |||||| ||||||||    
T  42914884 gaagcagaagaatgactcgttaacacaagtcg---aagggagaagagaggaatcgcacaggaatcatcaactgcgaaattcggtttaaagaat 42914973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 1934517 - 1934465
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  1934517 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 1934465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 9180250 - 9180198
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  9180250 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 9180198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 31327324 - 31327376
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||| ||||||||||||  |||||||||||||||||    
T  31327324 gagatgaag-agaagaaagacttgtcaacacaagtcaaaaaagggagaagagag 31327376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 12797498 - 12797549
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagaga 61  Q
    ||||||||| ||||||| |||||||||||||||||  | ||||||||||||||    
T  12797498 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagaga 12797549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 193805 - 193725
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||| ||||| ||||||||||||||||||||    
T  193805 agaagaaagactcgtcaacacaagtcgaagaagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcggtgt 193725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 188116 - 188042
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    |||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||| |||||||    
T  188116 agaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgtatttcgg 188042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 422 - 500
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggt 97  Q
    ||||||| ||||||||||||||||| |||| |||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  422 agaagaaagactcgtcaacacaagtcgaaagagggagaagagaagaaaaacacaggaagcatcaactgtgaatttcggt 500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 49519 - 49441
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    |||| |||| |||||||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  49519 agaacgacttgtcaacacaagtcgaagaagggagaagagaggaaaaacacaggaagcgtcaactgtgaatttcggtgta 49441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 149115 - 149193
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    |||| |||| |||||||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  149115 agaacgacttgtcaacacaagtcgaagaagggagaagagaggaaaaacacaggaagcgtcaactgtgaatttcggtgta 149193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 10140677 - 10140755
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||||| |||||||||||| |||  |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  10140677 agaaggacttgtcaacacaagtcgaaggagggagaagagaagaaaaacacatgaagcatcaactgtgaatttcggtgta 10140755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 41387513 - 41387433
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  41387513 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaaacacatgatgcatcaactgtgaatttcggtgt 41387433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 14724504 - 14724571
Alignment:
Q  27 gactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttc 94  Q
    ||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  14724504 gactcgtcaacacaagtcgaaaaaggtagaagagaggaaaagcacatgaagcatcaactgtgaatttc 14724571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 10135909 - 10135986
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| |||||||||||| |||  |||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  10135909 agaaggacttgtcaacacaagtcgaaggagggagaagagaagaaaaacacaggaagcatcaactgtgaatttcggtgt 10135986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 22428733 - 22428656
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||| ||| | |||||||||||||||||    
T  22428733 agaagaaagactcgtcaacacaagtcgaagaagggagaagagaggaaaagcacaggaatcatcaactgtgaatttcgg 22428656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 26927232 - 26927155
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||| |||| |||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  26927232 agaatgacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcggtgt 26927155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 41097493 - 41097416
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||| |||| |||||||||||| |||  |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  41097493 agaacgacttgtcaacacaagtcgaaggagggagaagagaggaaaagcacatgaagcatcaactgtgaatttcggtgt 41097416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 1067037 - 1067113
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcg 95  Q
    |||||||  |||||||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  1067037 agaagaaaaactcgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagcatcaactgtgaatttcg 1067113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 16836824 - 16836744
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||  ||| |||||||||||| |||  |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  16836824 agaagaaaaacttgtcaacacaagtcgaaggagggagaagagaggaaaagcacatgaagcatcaactgtgaatttcggtgt 16836744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 39243561 - 39243481
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  39243561 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 39243481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 39247116 - 39247036
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  39247116 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 39247036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 26198922 - 26199001
Alignment:
Q  27 gactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaat 106  Q
    |||||||||| ||||||  || ||||||||||||||||||| |||| ||||| ||||||||||||||||||||| |||||    
T  26198922 gactcgtcaagacaagtctaagaagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcggtgtacagaat 26199001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 18784089 - 18784011
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaac-acatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||||||||||||||| | |||||||||||||  ||| |||||| ||||||||| ||||||||||||||||||||    
T  18784089 agaaggactcgtcaacacaattcgaaaaagggagaatggagaaaaaaccacatgaagcatcaactgtgaatttcggtgt 18784011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 25188125 - 25187995
Alignment:
Q  20 gaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagacaaac 119  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||| ||||  || | ||||||||   ||||||||||||||||||| ||  | | |    
T  25188125 gaagaaggactcgtcaacacaagtcgaaagagggaaaagagaggaaaagcacagaaaacatcaactgtatttttcggtgtaaagaataagcgaagcgagc 25188026  T
Q  120 tctcattttatatgaagagttcgtaacaaaa 150  Q
    |||| |||||||   ||||||| ||||||||    
T  25188025 tctccttttatagtgagagttcttaacaaaa 25187995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 3094648 - 3094725
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  3094648 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacaggaagtatcaactgtgaatttcggtgt 3094725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 1924592 - 1924512
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  1924592 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 1924512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 19725431 - 19725363
Alignment:
Q  30 tcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtg 98  Q
    ||||||||||||||||||  ||||||||||| |||||| |||| ||||| |||||||||||||||||||    
T  19725431 tcgtcaacacaagttgaaggagggagaagaggggaaaagcacaggaagcatcaactgtgaatttcggtg 19725363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 20923606 - 20923526
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  20923606 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 20923526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 14804060 - 14804137
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    |||||||  |||||| || |||||| ||||||||||||||||||||||| |||| ||| | |||||||||||||||||    
T  14804060 agaagaaaaactcgttaagacaagtcgaaaaagggagaagagaggaaaagcacaggaatcatcaactgtgaatttcgg 14804137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 51041022 - 51040949
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcg 95  Q
    ||||||||| |||||||||||| |||  |||||||||||||||||||||||  || | ||||||||||||||||    
T  51041022 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacagaaaacatcaactgtgaatttcg 51040949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 52100759 - 52100690
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtg 88  Q
    ||||||| |||||||||| |||||| ||| |||||||||||||||||||||||| ||| | |||||||||    
T  52100759 agaagaaagactcgtcaagacaagtcgaagaagggagaagagaggaaaaacacaggaatcatcaactgtg 52100690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 21498207 - 21498287
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| ||||||||||||  |||| |||| ||||| ||||||||| ||||||||||    
T  21498207 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaaaaaaagcacaggaagcatcaactgtgtatttcggtgt 21498287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 13893873 - 13893952
Alignment:
Q  20 gaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||||||||||||||||||  ||  ||||  ||||||||||||||||| ||||| |||||||||| |||| ||||    
T  13893873 gaagaaggactcgtcaacacaagtcaaaggaggggaaagagaggaaaaacacaggaagcatcaactgtgattttcagtgt 13893952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 14724680 - 14724727
Alignment:
Q  177 taaaacaaaccgcgtttgttttcgtgtgtggatatatccggaaccttc 224  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||    
T  14724680 taaaacaatccgcgtttgttttcgtgtgtggatatatctggaaccttc 14724727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 40232912 - 40232846
Alignment:
Q  33 tcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||||| |||  ||||||||||||||||||  ||| ||||| ||||||||||||||||||||    
T  40232912 tcaacacaagtcgaaggagggagaagagaggaaaagtacaggaagcatcaactgtgaatttcggtgt 40232846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 14819528 - 14819605
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| ||||||| || |||||| ||||||||||||||||| |||||  ||| ||| | |||||||||||||||||    
T  14819528 agaagaaagactcgttaagacaagtcgaaaaagggagaagagaagaaaagtacaagaatcatcaactgtgaatttcgg 14819605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 17213982 - 17213901
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||| ||||||| ||||||||| |||  ||||||||||||||||||||| | ||| | |||||| | ||||||||||||    
T  17213982 agaagaatgactcgttaacacaagtcgaaggagggagaagagaggaaaaacataggaaacatcaactataaatttcggtgta 17213901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 2384772 - 2384704
Alignment:
Q  31 cgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||| ||||    
T  2384772 cgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttccgtgt 2384704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 33055595 - 33055679
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaat 106  Q
    |||||||||  | ||||||||| |||  |||||||||||| |||||||||| ||| | |||||||||||||| |||||| |||||    
T  33055595 agaaggacttttaaacacaagtcgaaggagggagaagagaagaaaaacacaagaatcatcaactgtgaattttggtgtatagaat 33055679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 39747134 - 39747002
Alignment:
Q  16 agcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgagac 115  Q
    |||||||||| ||||||| ||||||||| |||   |||||||||||||||   |||| ||| | ||||||| ||| ||| |||| |||||| || | | |    
T  39747134 agcagaagaatgactcgttaacacaagtcgaa---gggagaagagaggaatcgcacaggaa-catcaactgcgaaattcagtgtgaagaatgaggggggc 39747039  T
Q  116 aaactctcattttatatgaagagttcgtaacaaaaaa 152  Q
     | ||||| ||||||| ||||||||||||||||||||    
T  39747038 gagctctccttttataggaagagttcgtaacaaaaaa 39747002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 7882557 - 7882609
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||| | |||||||||||||||    
T  7882557 gagatgaag-agaagaaagactcgtcaacacaagttaagaaagggagaagagag 7882609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 2367608 - 2367679
Alignment:
Q  28 actcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||||| ||||||   || |||||||||||| ||||| |||| ||||| ||||||||||||||| ||||    
T  2367608 actcgtcaagacaagtcataagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttccgtgt 2367679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 26651019 - 26650882
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    ||||||| |||| ||||||| || |||||| |||   |||||||||||||||   |||||||| | || |||||| | |||||||| |||||| || | |    
T  26651019 gaagcaggagaacgactcgttaatacaagtcgaa---gggagaagagaggaatcgcacatgaatcatcgactgtggaattcggtgtgaagaatgaggggg 26650923  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaaacg 154  Q
     | | ||||| |||| || || |||||||||||||||||||    
T  26650922 gcgagctctccttttgtaggaggagttcgtaacaaaaaacg 26650882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 25844326 - 25844378
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  25844326 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 25844378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 39200285 - 39200233
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  39200285 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 39200233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 33821 - 33684
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    ||||||||||||||| |||||||||||||| |||  |||||||||||| ||||| |||||||| | |||| |||||||||| |||| |||||| |||| |    
T  33821 gaagcagaagaaggaatcgtcaacacaagtcgaaggagggagaagagacgaaaagcacatgaatcatcaaatgtgaatttcagtgttaagaatgagtggg 33722  T
Q  114 acaaactctcattttatatgaagagttcgtaacaaaaa 151  Q
       | ||||| ||||||| | | |||||||||||||||    
T  33721 gtgagctctccttttataggcatagttcgtaacaaaaa 33684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 64716 - 64793
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  64716 agaagaaagactcgtcaagacaagtcgaaaaagggagaagagaggaaaagcacatgaatcatcaactgtgaatttcgg 64793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 81114 - 81191
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||||| ||| ||||||||||||||||||| |||| ||| | |||||||||||||||||    
T  81114 agaagaaagactcgtcaagacaagtcgaagaagggagaagagaggaaaagcacaggaatcatcaactgtgaatttcgg 81191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 199748 - 199826
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggt 97  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||| ||| | ||||||||||||||||||    
T  199748 agaagaaagactcgtcaacacaagtcgaagaagggagaagagaggaaaagcacaggaatcatcaactgtgaatttcggt 199826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 3885 - 3808
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||||| |||| ||| ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  3885 agaagaaagactcgtcaacataagtcgaagaagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcgg 3808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 19752 - 19683
Alignment:
Q  27 gactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||||||||||||| |||||||||||||||||| |||| |||| ||||| |||||||||||||||||    
T  19752 gactcgtcaacacaagtcgaaaaagggagaagagagaaaaagcacaggaagcatcaactgtgaatttcgg 19683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 24834 - 24757
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||| |||| ||| | |||||||||||||||||    
T  24834 agaagaaagactcgtcaagacaagtcgaaaaagggagaagagaggaaaagcacaggaatcatcaactgtgaatttcgg 24757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 5419 - 5339
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  5419 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 5339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 10514 - 10434
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  10514 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 10434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 15015 - 14935
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  15015 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaagaagcatcaactgtgaatttcggtgt 14935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 11750 - 11830
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  11750 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 11830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 21863 - 21943
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| |||||||||| ||||| ||||||||||||||| ||||    
T  21863 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaaacacaggaagcatcaactgtgaatttcagtgt 21943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 126959 - 127039
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||    
T  126959 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagcatcaactgtgaatttcggtgt 127039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 7289 - 7418
Alignment:
Q  14 gaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtgag 113  Q
    |||||||||||| |||| || ||||||||| |||   |||||||||||||||   |||| ||| | || |||||| | ||||||||||||||| || | |    
T  7289 gaagcagaagaacgacttgttaacacaagtcgaa---gggagaagagaggaatcgcacaggaatcatcgactgtggaattcggtgtaaagaatgaggggg 7385  T
Q  114 acaaactctcattttatatgaagagttcgtaac 146  Q
     | | ||||| ||||||| || |||||||||||    
T  7386 gcgagctctccttttataggatgagttcgtaac 7418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 47508 - 47430
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    |||| |||| |||||||||||| |||  |||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  47508 agaacgacttgtcaacacaagtcgaaggagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcggtgta 47430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 52452 - 52374
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    |||| |||| |||||||||||| |||  |||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  52452 agaacgacttgtcaacacaagtcgaaggagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcggtgta 52374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 35239 - 35161
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||||| ||||||| |||| |||  |||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  35239 agaaggacttgtcaacataagtcgaaggagggagaagagaggaaaagcacaggaagcatcaactgtgaatttcggtgta 35161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 775 - 697
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||||  ||| ||||| |||||||||||||||||||||    
T  775 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaagtacaggaagcatcaactgtgaatttcggtgta 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 22231 - 22308
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||| |||||||||| | ||| ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  22231 agaagaaagacttgtcaacacaaatcgaagaagggagaagagaggaaaaccacaggaagcatcaactgtgaatttcgg 22308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 12506 - 12426
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| ||||  |||| ||||||||||||||||||||    
T  12506 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaatcacagaaagcatcaactgtgaatttcggtgt 12426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 1044 - 1124
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  1044 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 1124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 10964 - 10884
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  10964 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 10884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 32123 - 32043
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  32123 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 32043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 13550 - 13470
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  13550 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 13470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 21524 - 21444
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  21524 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 21444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 121122 - 121202
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| || | ||||| ||||||||||||||||||||    
T  121122 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcataggaagcatcaactgtgaatttcggtgt 121202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 35549 - 35469
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||  ||||||||||||||||||||    
T  35549 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaggaagtatcaactgtgaatttcggtgt 35469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 9416 - 9338
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaa-cacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||| ||| |||||||||||| |||  ||||||||||||||||||| |||| ||||| ||||||||||||||||||||    
T  9416 agaagaacttgtcaacacaagtcgaaggagggagaagagaggaaaaaacacaggaagcatcaactgtgaatttcggtgt 9338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 254 - 331
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| |||||||||| |||||| ||| ||||||||||| || |||| |||| ||||| |||||||||||||||||    
T  254 agaagaaagactcgtcaagacaagtcgaagaagggagaagaaagaaaaagcacaggaagcatcaactgtgaatttcgg 331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 30823 - 30903
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| ||||||| |||||||||  ||| |||||||||||| ||||| || | ||||| ||||||||||||||||||||    
T  30823 agaagaaagactcgttaacacaagtcaaaagagggagaagagaagaaaagcataggaagcatcaactgtgaatttcggtgt 30903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 22265 - 22345
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| |||   ||||||||||||||||||||    
T  22265 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaagcacaagaaaaatcaactgtgaatttcggtgt 22345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 81374 - 81430
Alignment:
Q  22 agaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagc 78  Q
    ||||||||| |||||||||||| |||  |||||||||||||||||||||||||||||    
T  81374 agaaggacttgtcaacacaagtcgaaggagggagaagagaggaaaaacacatgaagc 81430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 43355 - 43439
Alignment:
Q  27 gactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgtaaagaataagtg 111  Q
    ||||| |||||||||||||||  |||||||||||||||||| ||||  |||| |||| |||| ||||| |||| |||||||||||    
T  43355 gactcttcaacacaagttgaatgagggagaagagaggaaaatcacagaaagcatcaattgtgtatttcagtgtgaagaataagtg 43439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 6961 - 7024
Alignment:
Q  36 acacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    |||||||| |||  |||||||||||||||||| |||||||||| |||||| |||||||||||||    
T  6961 acacaagtcgaaggagggagaagagaggaaaagcacatgaagcatcaactatgaatttcggtgt 7024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 30240 - 30317
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcgg 96  Q
    ||||||| ||||||| |||||||||  ||| |||||||||||| ||||| || | ||||| |||||||||||||||||    
T  30240 agaagaaagactcgttaacacaagtcaaaagagggagaagagaagaaaagcataggaagcatcaactgtgaatttcgg 30317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 7723 - 7803
Alignment:
Q  19 agaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgt 99  Q
    ||||||| |||||||||||||||||  ||| |||||||||||| ||||| |||| ||||| | || |||||||||| ||||    
T  7723 agaagaaagactcgtcaacacaagtcaaaagagggagaagagaagaaaatcacaggaagcataaattgtgaatttctgtgt 7803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 70456 - 70376
Alignment:
Q  20 gaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtga-atttcggtgt 99  Q
    ||||||||||| |||||||||||| |||  ||||||||||||  |||| |||| ||| | |||||||||| ||||||||||    
T  70456 gaagaaggacttgtcaacacaagtcgaaggagggagaagagaaaaaaagcacaggaaacatcaactgtgagatttcggtgt 70376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 58996 - 59063
Alignment:
Q  33 tcaacacaagttgaaaaagggagaagagaggaaaaacacatgaagcctcaactgtgaatttcggtgta 100  Q
    ||||||||||| |||  | |||||||||||||||| |||| ||||| |||| | ||||||||||||||    
T  58996 tcaacacaagtcgaaggacggagaagagaggaaaagcacaggaagcatcaattatgaatttcggtgta 59063  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 29747 - 29804
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagaggaaaa 67  Q
    ||||||||| ||||||| |||||||||||||||||  | ||||||||||||||| ||||    
T  29747 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaaaa 29804  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 4635 - 4687
Alignment:
Q  9 gagatgaagcagaagaaggactcgtcaacacaagttgaaaaagggagaagagag 62  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  4635 gagatgaag-agaagaaagactcgtcaacacaagtcaagaaagggagaagagag 4687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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