View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8905A_low_241 (Length: 238)

Name: NF8905A_low_241
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8905A_low_241
NF8905A_low_241
[»] chr1 (33 HSPs)
chr1 (31-213)||(23378501-23378683)
chr1 (32-147)||(23591698-23591811)
chr1 (32-203)||(1502729-1502897)
chr1 (32-203)||(38812740-38812909)
chr1 (32-203)||(13321876-13322045)
chr1 (32-203)||(30171879-30172048)
chr1 (32-203)||(30187420-30187589)
chr1 (32-203)||(23576423-23576591)
chr1 (48-193)||(36490795-36490938)
chr1 (34-203)||(6754474-6754640)
chr1 (32-180)||(39627603-39627749)
chr1 (34-117)||(41624832-41624915)
chr1 (32-203)||(6180186-6180355)
chr1 (32-203)||(39150336-39150504)
chr1 (43-187)||(47355403-47355544)
chr1 (32-149)||(7824921-7825036)
chr1 (43-187)||(7520022-7520164)
chr1 (32-203)||(35512725-35512894)
chr1 (33-121)||(5857990-5858079)
chr1 (29-102)||(29924356-29924429)
chr1 (32-203)||(22167335-22167504)
chr1 (86-192)||(52337821-52337924)
chr1 (32-140)||(17919454-17919559)
chr1 (32-144)||(34050351-34050461)
chr1 (32-98)||(44918025-44918091)
chr1 (32-143)||(3121119-3121227)
chr1 (33-98)||(8062206-8062271)
chr1 (94-149)||(33048175-33048227)
chr1 (64-121)||(35941110-35941167)
chr1 (40-117)||(43317498-43317575)
chr1 (44-141)||(50079870-50079966)
chr1 (32-97)||(51382372-51382437)
chr1 (48-149)||(25956665-25956764)
[»] chr7 (20 HSPs)
chr7 (32-142)||(42750289-42750396)
chr7 (33-203)||(47457470-47457638)
chr7 (31-203)||(26300572-26300740)
chr7 (32-203)||(24462964-24463132)
chr7 (32-203)||(33342989-33343157)
chr7 (34-203)||(7170005-7170171)
chr7 (39-203)||(25709408-25709570)
chr7 (32-203)||(46290011-46290179)
chr7 (32-141)||(19868114-19868221)
chr7 (32-140)||(19889341-19889446)
chr7 (32-185)||(47707911-47708065)
chr7 (59-149)||(3530177-3530264)
chr7 (32-203)||(34270266-34270430)
chr7 (32-98)||(9331962-9332028)
chr7 (32-203)||(23982764-23982933)
chr7 (125-203)||(33072072-33072150)
chr7 (32-97)||(24250314-24250379)
chr7 (32-97)||(29398227-29398292)
chr7 (33-203)||(36548469-36548636)
chr7 (42-121)||(12650831-12650911)
[»] chr4 (37 HSPs)
chr4 (32-193)||(2096871-2097030)
chr4 (32-203)||(24684836-24685006)
chr4 (32-203)||(9759151-9759319)
chr4 (32-193)||(19468194-19468353)
chr4 (34-193)||(19450919-19451076)
chr4 (32-140)||(7349689-7349794)
chr4 (46-116)||(10813587-10813658)
chr4 (32-193)||(50352303-50352461)
chr4 (32-203)||(16667393-16667562)
chr4 (32-141)||(6875501-6875608)
chr4 (32-193)||(8736830-8736988)
chr4 (32-203)||(17409824-17409993)
chr4 (32-148)||(25843291-25843406)
chr4 (32-193)||(34941278-34941437)
chr4 (34-203)||(49181074-49181241)
chr4 (69-193)||(37784879-37785001)
chr4 (32-193)||(40049559-40049717)
chr4 (32-147)||(23545476-23545589)
chr4 (32-147)||(27019260-27019373)
chr4 (32-97)||(10389380-10389445)
chr4 (33-147)||(33632267-33632379)
chr4 (43-100)||(40681960-40682017)
chr4 (32-97)||(49228357-49228422)
chr4 (33-147)||(19838756-19838866)
chr4 (32-193)||(52391298-52391457)
chr4 (88-193)||(1378075-1378177)
chr4 (47-203)||(27362406-27362560)
chr4 (32-95)||(45742368-45742431)
chr4 (56-147)||(13009820-13009909)
chr4 (45-193)||(39876844-39876989)
chr4 (32-121)||(49332333-49332423)
chr4 (32-203)||(54495646-54495815)
chr4 (32-109)||(10658544-10658621)
chr4 (32-109)||(10872689-10872766)
chr4 (32-99)||(3728249-3728317)
chr4 (85-142)||(35645071-35645126)
chr4 (88-193)||(55813920-55814023)
[»] chr8 (41 HSPs)
chr8 (32-203)||(26682068-26682237)
chr8 (32-203)||(20514632-20514802)
chr8 (32-203)||(6818017-6818186)
chr8 (32-203)||(31812113-31812282)
chr8 (32-203)||(3306064-3306232)
chr8 (32-97)||(7750668-7750733)
chr8 (32-187)||(12131983-12132136)
chr8 (32-139)||(14816198-14816303)
chr8 (32-139)||(14829437-14829542)
chr8 (32-147)||(38843704-38843817)
chr8 (32-203)||(2161388-2161556)
chr8 (32-97)||(11923015-11923080)
chr8 (32-97)||(38527821-38527886)
chr8 (61-147)||(34741730-34741813)
chr8 (32-118)||(8284660-8284747)
chr8 (40-117)||(5298077-5298157)
chr8 (32-187)||(9580134-9580287)
chr8 (32-139)||(35678347-35678452)
chr8 (32-97)||(7140571-7140636)
chr8 (32-97)||(9824959-9825024)
chr8 (32-97)||(12189701-12189766)
chr8 (32-97)||(12434129-12434194)
chr8 (32-97)||(13328053-13328118)
chr8 (52-146)||(16445801-16445893)
chr8 (68-203)||(39024866-39024998)
chr8 (32-97)||(40210933-40210998)
chr8 (32-120)||(45005970-45006059)
chr8 (33-93)||(11947016-11947076)
chr8 (32-140)||(9743862-9743967)
chr8 (39-147)||(10974619-10974725)
chr8 (32-78)||(11117129-11117175)
chr8 (32-143)||(32186186-32186295)
chr8 (32-203)||(36967079-36967248)
chr8 (30-80)||(37523756-37523806)
chr8 (32-74)||(38213081-38213123)
chr8 (59-117)||(44091346-44091404)
chr8 (32-97)||(10129104-10129169)
chr8 (32-97)||(12346006-12346071)
chr8 (59-116)||(45516316-45516373)
chr8 (34-117)||(35583368-35583453)
chr8 (33-97)||(40568314-40568378)
[»] chr2 (31 HSPs)
chr2 (32-202)||(15411632-15411800)
chr2 (32-187)||(9747317-9747470)
chr2 (32-117)||(12438740-12438825)
chr2 (32-193)||(5583577-5583735)
chr2 (32-140)||(14377425-14377530)
chr2 (41-203)||(45062207-45062367)
chr2 (32-193)||(43806360-43806519)
chr2 (32-140)||(27665116-27665221)
chr2 (32-147)||(23932565-23932678)
chr2 (32-193)||(34213968-34214129)
chr2 (32-140)||(34817544-34817649)
chr2 (32-121)||(39367059-39367149)
chr2 (32-97)||(12016667-12016732)
chr2 (69-203)||(24729586-24729718)
chr2 (85-187)||(2579983-2580082)
chr2 (33-97)||(7720116-7720180)
chr2 (57-141)||(2051639-2051721)
chr2 (32-118)||(43388857-43388944)
chr2 (32-147)||(36612796-36612909)
chr2 (32-147)||(36620647-36620760)
chr2 (32-82)||(36909503-36909553)
chr2 (32-98)||(39904159-39904225)
chr2 (32-97)||(4579901-4579966)
chr2 (32-187)||(7757811-7757963)
chr2 (32-89)||(16754971-16755028)
chr2 (32-97)||(16919266-16919331)
chr2 (32-97)||(19228426-19228491)
chr2 (32-97)||(22705455-22705520)
chr2 (32-89)||(26003612-26003669)
chr2 (40-123)||(25998088-25998172)
chr2 (127-203)||(26003355-26003431)
[»] chr6 (17 HSPs)
chr6 (32-185)||(30623326-30623477)
chr6 (32-203)||(6016856-6017025)
chr6 (49-139)||(29730295-29730383)
chr6 (32-193)||(8977485-8977644)
chr6 (32-203)||(34692354-34692523)
chr6 (32-203)||(14228135-14228303)
chr6 (32-203)||(28943778-28943946)
chr6 (34-203)||(10887031-10887198)
chr6 (32-187)||(1017803-1017956)
chr6 (32-97)||(1814894-1814959)
chr6 (32-97)||(3485711-3485776)
chr6 (32-97)||(24979262-24979327)
chr6 (34-89)||(17596315-17596370)
chr6 (32-193)||(33017725-33017883)
chr6 (32-203)||(29863311-29863480)
chr6 (32-97)||(5363005-5363070)
chr6 (32-203)||(17552596-17552764)
[»] chr5 (20 HSPs)
chr5 (32-203)||(30839782-30839950)
chr5 (32-203)||(36597580-36597748)
chr5 (32-149)||(18841768-18841883)
chr5 (34-203)||(8103589-8103755)
chr5 (32-203)||(3398220-3398389)
chr5 (32-139)||(5958196-5958301)
chr5 (32-203)||(40512952-40513120)
chr5 (32-139)||(11636732-11636837)
chr5 (40-121)||(10665053-10665134)
chr5 (32-89)||(11360186-11360243)
chr5 (32-76)||(11250090-11250134)
chr5 (43-140)||(28629890-28629984)
chr5 (32-76)||(33072677-33072721)
chr5 (94-203)||(15240959-15241065)
chr5 (44-98)||(11375972-11376026)
chr5 (125-187)||(15820317-15820379)
chr5 (32-98)||(34578012-34578078)
chr5 (59-142)||(40309497-40309580)
chr5 (32-97)||(2795524-2795589)
chr5 (32-97)||(24014800-24014865)
[»] chr3 (26 HSPs)
chr3 (32-203)||(2571269-2571437)
chr3 (32-203)||(10307767-10307935)
chr3 (31-140)||(20938056-20938162)
chr3 (49-142)||(53794781-53794872)
chr3 (32-193)||(54527725-54527884)
chr3 (41-119)||(2379162-2379238)
chr3 (64-193)||(38786343-38786468)
chr3 (32-203)||(38389447-38389616)
chr3 (32-203)||(50204403-50204572)
chr3 (39-122)||(24569324-24569408)
chr3 (34-147)||(46492408-46492519)
chr3 (32-203)||(51618050-51618216)
chr3 (32-140)||(11610915-11611020)
chr3 (34-117)||(37444149-37444232)
chr3 (31-118)||(40330381-40330468)
chr3 (32-120)||(37055455-37055544)
chr3 (32-193)||(13495294-13495453)
chr3 (32-193)||(42180052-42180211)
chr3 (32-121)||(47386922-47387013)
chr3 (32-83)||(8497550-8497601)
chr3 (32-118)||(46845531-46845618)
chr3 (43-117)||(13879899-13879973)
chr3 (31-97)||(26200733-26200799)
chr3 (32-116)||(30214103-30214187)
chr3 (32-97)||(32321835-32321899)
chr3 (125-201)||(51401531-51401607)
[»] scaffold0111 (1 HSPs)
scaffold0111 (32-203)||(37123-37292)
[»] scaffold0631 (1 HSPs)
scaffold0631 (33-76)||(443-486)
[»] scaffold0129 (1 HSPs)
scaffold0129 (39-147)||(13723-13829)
[»] scaffold0618 (1 HSPs)
scaffold0618 (59-117)||(8506-8564)
[»] scaffold0036 (1 HSPs)
scaffold0036 (33-144)||(94086-94195)
[»] scaffold0061 (1 HSPs)
scaffold0061 (32-97)||(52891-52956)
[»] scaffold0017 (1 HSPs)
scaffold0017 (32-97)||(145678-145743)
[»] scaffold0011 (1 HSPs)
scaffold0011 (32-97)||(13086-13151)
[»] scaffold0149 (1 HSPs)
scaffold0149 (32-76)||(22460-22504)


Alignment Details
Target: chr1 (Bit Score: 171; Significance: 6e-92; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 31 - 213
Target Start/End: Complemental strand, 23378683 - 23378501
Alignment:
Q  31 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23378683 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacaattatttgttaaaaagttacactatatt 23378584  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatgagtctaggctt 213  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  23378583 taatataaaatgtacaaatagcaattcaaatttactattttgaaattcttaacatgttcaaatttgtacatgagtctaggctt 23378501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 23591698 - 23591811
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||| |||||||||||| ||| |||||||||||||| || | |||||| |||||||||||   ||||||    
T  23591698 gtttgtctaacatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagtta---tatatt 23591794  T
Q  131 taatataaaatgtacaa 147  Q
    ||||| |||||||||||    
T  23591795 taatacaaaatgtacaa 23591811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 1502897 - 1502729
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||| |||| ||||||   |||||||||   |||||||    
T  1502897 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaacaacaattatttaacaaaaagtta---tatattt 1502801  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| |||||  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  1502800 aatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 1502729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 38812740 - 38812909
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    ||||||||||||||||||| |||  | |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  38812740 gtttgtttaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttagaaaacaacaattatttattcaaaagtt---ttatatt 38812836  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| |||||||||| |  ||||  ||| || | |||||||| |||||||||||| ||||| || ||||||    
T  38812837 taatattaaatgtacaagtttcaatataaaatttctattttgaacttcttaacatgtgcaaatttgcacatga 38812909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 13321876 - 13322045
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| |||  | |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || |||||||    ||||||    
T  13321876 gtttgtctaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattttttcaaaagtt---ttatatt 13321972  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| ||||||||||||  |||| |||| || | ||||| || |||||||||| | ||||| || ||||||    
T  13321973 taatattaaatgtacaaattccaatacaaaatttctattttaaacttcttaacatatgcaaatttgcacatga 13322045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 30171879 - 30172048
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| ||||||||| |||| || | |||||| |||||||| |||   |||||    
T  30171879 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctac---atatt 30171975  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| ||||| || ||||||    
T  30171976 taatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 30172048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 30187420 - 30187589
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| ||||||||| |||| || | |||||| |||||||| |||   |||||    
T  30187420 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctac---atatt 30187516  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| ||||| || ||||||    
T  30187517 taatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 30187589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 23576591 - 23576423
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||| ||||||||| || |||||||   |||||||| ||| || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  23576591 gtttgtctaacatctgcaatattgcacatgttaaggtaactaaaagtaacaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 23576495  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  23576494 aatacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 23576423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 36490795 - 36490938
Alignment:
Q  48 caatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtaca 146  Q
    ||||||| || |||||||| ||| ||||| || ||| |||||||||||||  |||| |||||| |||||||||||   |||||| |||| ||||||||||    
T  36490795 caatattgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagtta---tatattaaatacaaaatgtaca 36490891  T
Q  147 aatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    | |  |||| |||| |||| ||||| || |||||||||||| |||||    
T  36490892 agttccaatgcaaagttactattttaaacttcttaacatgtgcaaat 36490938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 203
Target Start/End: Original strand, 6754474 - 6754640
Alignment:
Q  34 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 133  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  6754474 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 6754570  T
Q  134 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| ||||| || ||||||    
T  6754571 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 6754640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 180
Target Start/End: Complemental strand, 39627749 - 39627603
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||||||||||||||||||| |||||||   |||||||| ||  ||||||| ||||||||  |||| | | || || ||||||||||   ||||    
T  39627749 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttaca---tatt 39627653  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattctt 180  Q
    |||||||||||| |||| |  |||| ||||||||| |||||||| |||||    
T  39627652 taatataaaatgcacaagttacaatacaaatttactattttgaacttctt 39627603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 41624832 - 41624915
Alignment:
Q  34 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 117  Q
    |||| |||||||||||||||| || |||||||| ||||||||| || ||||||||||||||||  |||| ||| || |||||||    
T  41624832 ttgtctaacatgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaa 41624915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 6180186 - 6180355
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||| | | |||||| || |||||||    ||||||    
T  6180186 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaattataattatttatttaaaagtt---ttatatt 6180282  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| |||||||||| |  ||||  ||| || | ||||| || |||||||||||| ||||| || ||||||    
T  6180283 taatattaaatgtacaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 6180355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 39150504 - 39150336
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  39150504 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 39150409  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||||||||   ||||||  ||| ||||| |||| | ||| || |||||| ||||| ||||| || ||||||    
T  39150408 taatataaaaaacacaaattccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 39150336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 187
Target Start/End: Complemental strand, 47355544 - 47355403
Alignment:
Q  43 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatg 142  Q
    |||||||||||| || |||||||| ||||||||| ||  |||||||||||||||| |||| ||| || | |||||| ||   |||  |||||||||||||    
T  47355544 atgtgcaatattgcacatgttaaagcaactaaaagtataaactttttattgaaaacaacaattacttatcaaaaaggta---tatcattaatataaaatg 47355448  T
Q  143 tacaaatagcaattcaaatttaccattttgaaattcttaacatgt 187  Q
     |||| |  |||| ||||||||  ||||| || ||||||||||||    
T  47355447 aacaagttccaatacaaatttattattttaaatttcttaacatgt 47355403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 7825036 - 7824921
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||  ||| |||||| || |||||||    ||||||    
T  7825036 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaaccacaattatttattcaaaagtt---ttatatt 7824940  T
Q  131 taatataaaatgtacaaat 149  Q
    |||||| ||||||||||||    
T  7824939 taatattaaatgtacaaat 7824921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 187
Target Start/End: Complemental strand, 7520164 - 7520022
Alignment:
Q  43 atgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatataaaat 141  Q
    |||||||||||| || |||||||| ||||||||| || ||| ||||||||  ||||||| | |||||| |||||| ||||   |||||| |||| |||||    
T  7520164 atgtgcaatattgcacatgttaaagcaactaaaagtagtaaatttttattaaaaaataatacttatttattaaaatgtta---tatattaaatacaaaat 7520068  T
Q  142 gtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 187  Q
    ||||||||  |||| |||| ||   ||||| || ||||||||||||    
T  7520067 gtacaaatttcaatgcaaagttgttattttaaacttcttaacatgt 7520022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 35512725 - 35512894
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||| | || |||||||    ||||||    
T  35512725 gtttgtctaacatgtgcaacattgcaaatgttaaaacaactaatagtagtaactttttcttggaaaacaacatttatatattcaaaagtt---ttatatt 35512821  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| |||||| ||| |  ||||  ||| || | ||||| || |||||||||||| ||||| || ||||||    
T  35512822 taatattaaatgtgcaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 35512894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 5857990 - 5858079
Alignment:
Q  33 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataa-cagttatttgttaaaaagtta 121  Q
    ||||||||||||||||||||||  | || ||||||||| ||||| ||| ||||||||||| |||| ||  | |||||| |||||||||||    
T  5857990 tttgtttaacatgtgcaatatttgacatattaaaacaattaaaagtaacaactttttattaaaaacaagtaattatttattaaaaagtta 5858079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 29924429 - 29924356
Alignment:
Q  29 tttgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataaca 102  Q
    ||||||||| |||||| |||||  ||||| ||| |||| ||||||||| ||| || ||||||||||||||||||    
T  29924429 tttgtttgtctaacatatgcaacgttacacatgctaaagcaactaaaaataacaattttttattgaaaataaca 29924356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 22167335 - 22167504
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 129  Q
    |||||| || ||||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  22167335 gtttgtctaccatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 22167430  T
Q  130 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||||| |||||||||| |  |||| |||| || | ||||| || |||||| ||||| ||||| || ||||||    
T  22167431 ttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 22167504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 52337821 - 52337924
Alignment:
Q  86 ttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacat 185  Q
    ||||||| | ||||||| |||||| ||||||| |||   |||||||||||||||||  | || | ||||| || |||||| ||||| || ||||||||||    
T  52337821 ttttattaataataacaattatttattaaaaattta---tatatttaatataaaatacataagttgcaatgcatatttactattttaaacttcttaacat 52337917  T
Q  186 gttcaaa 192  Q
    |||||||    
T  52337918 gttcaaa 52337924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 17919454 - 17919559
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||||||||||||||||  | |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  17919454 gtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 17919549  T
Q  131 taatataaaa 140  Q
    ||||||||||    
T  17919550 taatataaaa 17919559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 34050461 - 34050351
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || |||||||| |||| |||| ||| || || |||||| |||| |||| |||||| | ||||| |||   ||||||    
T  34050461 gtttgtctaacatgtgcaatattgcacatgttaaagcaaccaaaagtaacaaattattattgaaaaacaacaattatttatcaaaaaatta---tatatt 34050365  T
Q  131 taatataaaatgta 144  Q
     |||||||||||||    
T  34050364 aaatataaaatgta 34050351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 44918025 - 44918091
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 98  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||| ||||||||||||||    
T  44918025 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaat 44918091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 3121119 - 3121227
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| ||| |||||||||||||||||||||||   || ||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  3121119 gtttgtctaatatgtgcaatattacatatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 3121215  T
Q  132 aatataaaatgt 143  Q
    |||| |||||||    
T  3121216 aatacaaaatgt 3121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 8062206 - 8062271
Alignment:
Q  33 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 98  Q
    ||||||||||||||||||||||  | |||||||   |||||||| || |||||||| |||||||||    
T  8062206 tttgtttaacatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaat 8062271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 33048227 - 33048175
Alignment:
Q  94 aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaat 149  Q
    ||||||||| |||||| |||||||||||   ||||||||||||||||| |||||||    
T  33048227 aaaataacaattatttattaaaaagtta---tatatttaatataaaatatacaaat 33048175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 35941167 - 35941110
Alignment:
Q  64 aaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagtta 121  Q
    |||| |||||||| || |||||||||||| |||| |||| |||||| |||||||||||    
T  35941167 aaaagaactaaaagtattaactttttattaaaaacaacatttatttattaaaaagtta 35941110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 43317498 - 43317575
Alignment:
Q  40 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 117  Q
    |||||||||||||||  | |||||||| ||||||||| || ||||| ||| ||||||| |||| | |||| |||||||    
T  43317498 aacatgtgcaatattgtacatgttaaagcaactaaaagtagtaactattttttgaaaacaacaatcatttattaaaaa 43317575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 50079870 - 50079966
Alignment:
Q  44 tgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaat 141  Q
    |||||||||||| |||||||||| ||| ||||| || |||||||||||| |||| |  | |||||| ||||||| ||| |   |||||||||||||||    
T  50079870 tgtgcaatattatatatgttaaagcaattaaaa-tagtaactttttattaaaaaaattaattatttattaaaaaattatatattatttaatataaaat 50079966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 51382372 - 51382437
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  51382372 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 51382437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 25956665 - 25956764
Alignment:
Q  48 caatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtaca 146  Q
    ||||||| || || ||||||||||||| | |||||||||||| ||| |||| |||| |||||| || |||||||    |||||||||||| ||||||| |    
T  25956665 caatattgcacatattaaaacaactaataataataactttttcttgaaaaacaacaattatttatttaaaagtt---ttatatttaatattaaatgtata 25956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 42750289 - 42750396
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || | |||||| ||||||||||||| |   |||    
T  42750289 gtttgtttaacatgtgcaatattgcatatgttaaagcaactaaaaataataactttttattgaaaacaataattatttattaaaaagttacaat---ttt 42750385  T
Q  132 aatataaaatg 142  Q
    |||||||||||    
T  42750386 aatataaaatg 42750396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 33 - 203
Target Start/End: Complemental strand, 47457638 - 47457470
Alignment:
Q  33 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataa-ctttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    ||||| |||||||||||||||| || |||||||||||||||||| || |||  |||||||||||||||||| |||||| || ||||| |||||   || |    
T  47457638 tttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaataacaattatttatttaaaagctacac---atat 47457542  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||||||||| | ||||  ||| ||||| |||| | ||| || || ||||||||| ||||| || ||||||    
T  47457541 aatataaaatgcataaattccaagtcaaagttactactttaaattttttaacatgtgcaaatttgcacatga 47457470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 26300572 - 26300740
Alignment:
Q  31 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatt 130  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||| || ||| | | ||||||||| || |   | || |||||||||||   || |||    
T  26300572 tgtttgtctaacatgtgtaatattgcatatgttaaaacaactaaaagtattaattctgtattgaaaa-aaaaaaaaattattaaaaagtta---tacatt 26300667  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||| ||||| ||||| |  ||||||||| |||| ||||| || || ||||||||| ||||| |||||||||    
T  26300668 taatacaaaatatacaagtttcaattcaaagttactattttaaactttttaacatgtgcaaatttgtacatga 26300740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 24463132 - 24462964
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| ||||||||| |||||| || |||||||  ||||||||| || ||| || |||||||||| ||||  ||||| |||||||  ||||   |||||    
T  24463132 gtttgtctaacatgtgaaatatttcacatgttaaggcaactaaaagtagtaatttcttattgaaaacaacaagtatttattaaaaaactaca---tattt 24463036  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||||||||||||||    || ||||| |||  ||||| || |||||||||||| ||||| || ||||||    
T  24463035 aatataaaatgtacaaactttaagtcaaagttattattttaaacttcttaacatgtgcaaatttgcacatga 24462964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 33342989 - 33343157
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  33342989 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 33343085  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  33343086 aatacaaaatgttcaagttccaatacaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 33343157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 203
Target Start/End: Original strand, 7170005 - 7170171
Alignment:
Q  34 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 133  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  7170005 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 7170101  T
Q  134 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| ||||| || ||||||    
T  7170102 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 7170171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 203
Target Start/End: Complemental strand, 25709570 - 25709408
Alignment:
Q  39 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattga-aaataacagttatttgttaaaaagttacactatatttaatata 137  Q
    ||||||||| |||||| || |||||||| ||||||||| || ||| |||||||||| ||| |||| | |||| |||||||| |||    ||||||||||     
T  25709570 taacatgtgaaatattgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacc---tatttaatatg 25709474  T
Q  138 aaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||| |||| |  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  25709473 aaatgaacaagttccaatacaaagttactattttaaacttcttaacatgtgcaaatttgcacatga 25709408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 46290011 - 46290179
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||| ||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  46290011 gtttgtctaacatgtgcaaaattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 46290107  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  46290108 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 46290179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 19868114 - 19868221
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || ||||||| |||||||||| || ||| |||| |||| |||| | || |||||| | |||||||||   ||||||    
T  19868114 gtttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagtta---tatatt 19868210  T
Q  131 taatataaaat 141  Q
    |||||||||||    
T  19868211 taatataaaat 19868221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 19889341 - 19889446
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  19889341 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 19889436  T
Q  131 taatataaaa 140  Q
    ||||||||||    
T  19889437 taatataaaa 19889446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 47708065 - 47707911
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaacta---aaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactat 127  Q
    |||||| || ||| |||||| ||||| |||||||||||||||   ||| ||| ||  |||||| |||||  |||| |||||| |||||||||||   |||    
T  47708065 gtttgtctatcatatgcaatgttacacatgttaaaacaactactaaaagtaacaagattttatggaaaaacaacaattatttattaaaaagtta---tat 47707969  T
Q  128 atttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacat 185  Q
    |||||||| |||||||| || |  ||||||||| |||| ||||| || ||||||||||    
T  47707968 atttaatacaaaatgtataagtttcaattcaaaattactattttaaacttcttaacat 47707911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 149
Target Start/End: Complemental strand, 3530264 - 3530177
Alignment:
Q  59 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaat 149  Q
    |||||||| ||| ||| | |||||| ||||||||||||| |||| |||||| ||||||| |||   ||||||| |||||||||| ||||||    
T  3530264 atgttaaagcaattaagaataataattttttattgaaaacaacaattatttattaaaaaatta---tatatttgatataaaatgcacaaat 3530177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 34270266 - 34270430
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   ||||||||     || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  34270266 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaag----aagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 34270358  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  34270359 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 34270430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 9331962 - 9332028
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 98  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| |||||||||    
T  9331962 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaat 9332028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 23982933 - 23982764
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||||||||||||||||| | |||||||  ||||||||| || |||||||| ||| ||||  |||| ||| || ||||||| |||    |||||    
T  23982933 gtttgtctaacatgtgcaatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaactta---aatatt 23982837  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||||||||  |||| |  ||| ||||| |||| | ||| || |||||||| ||| ||||| || ||||||    
T  23982836 taatataaaatacacaagttccaagtcaaagttactactttaaatttcttaacgtgtgcaaatttgcacatga 23982764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 33072072 - 33072150
Alignment:
Q  125 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||||||||| ||||||| |||||  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  33072072 tatatttaatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtacaaatttgcacatga 33072150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 24250314 - 24250379
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  24250314 gtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaa 24250379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 29398292 - 29398227
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||| |||| ||||||||    
T  29398292 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaataatactaatttttcattgaaaa 29398227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 203
Target Start/End: Complemental strand, 36548636 - 36548469
Alignment:
Q  33 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatattt 131  Q
    ||||| |||||||||||||||| || |||||||   |||||||| || ||| |||||||||||||  |||| |||||  ||||| | ||||   ||||||    
T  36548636 tttgtctaacatgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgattaaata-ttac---atattt 36548541  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||||||  |||||||   || ||||| |||| | ||| || |||||||||||| ||||| || ||||||    
T  36548540 aatataaaaaatacaaattttaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatga 36548469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 12650831 - 12650911
Alignment:
Q  42 catgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagtta 121  Q
    |||||||||||||  | |||||||  ||||||||| || |||||||| |||||||| || || |||||| |||||||||||    
T  12650831 catgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaaaagtta 12650911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 2096871 - 2097030
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || | |||||| ||||||||| | | ||||||||||||||||  |||| |||||| |||||||||||   ||||||    
T  2096871 gtttgtctaacatgtgcaatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagtta---tatatt 2096967  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||||||||||| |||| |  |||| |||| ||||||||||||| |||||||||||| |||||    
T  2096968 taatataaaatgcacaagttccaatacaaacttaccattttgaacttcttaacatgtgcaaat 2097030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 24684836 - 24685006
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt--gaaaataacagttatttgttaaaaagttacactatat 129  Q
    ||||||||||||| ||||| |||||| |||||||||||||||| | || ||||||||| ||  ||||| |||| |||||| || |||||||    |||||    
T  24684836 gtttgtttaacatttgcaacattacacatgttaaaacaactaatagtagtaactttttttttggaaaacaacaattatttattcaaaagtt---ttatat 24684932  T
Q  130 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| ||||| || ||||||    
T  24684933 ttaatattaaatgtacaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 24685006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 9759319 - 9759151
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  9759319 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 9759223  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||| |||||||||    
T  9759222 aatacaaaatgttcaacttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgtacatga 9759151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 19468194 - 19468353
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  19468194 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 19468290  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||    
T  19468291 taatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgcaaat 19468353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 193
Target Start/End: Complemental strand, 19451076 - 19450919
Alignment:
Q  34 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatattta 132  Q
    |||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||||    
T  19451076 ttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatattta 19450980  T
Q  133 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||    
T  19450979 atattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 19450919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 7349689 - 7349794
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||||| |||||||||| || |||||||  ||||||||| ||||||||||| ||||||||  |||| ||||||||| |||||||||   |||||    
T  7349689 gtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgtt-aaaagttac---atatt 7349784  T
Q  131 taatataaaa 140  Q
    ||||||||||    
T  7349785 taatataaaa 7349794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 10813658 - 10813587
Alignment:
Q  46 tgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaa 116  Q
    ||||||||| ||||||||||  ||||||||| ||||||||||||||||||||  |||| |||||||||||||    
T  10813658 tgcaatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattatttgttaaaa 10813587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 50352303 - 50352461
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  50352303 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 50352399  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||    
T  50352400 aatacaaaatgttcaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaat 50352461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 16667562 - 16667393
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| |||| |||| |||| |||| |||||| |||||||| |||   |||||    
T  16667562 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctac---atatt 16667466  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||||||||  |||| |  ||| | ||| ||| |||||| || |||||||||||| ||||| || ||||||    
T  16667465 taatataaaatacacaagtttcaagttaaaattatcattttaaacttcttaacatgtgcaaatttgcacatga 16667393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 6875501 - 6875608
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||| ||||||||| || |||||||||||||||||| || |||  ||||||| ||||||| || |||||| || ||||||||   || |||    
T  6875501 gtttgtctaacatttgcaatattgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatttattgaaaagtta---taaatt 6875597  T
Q  131 taatataaaat 141  Q
    |||||||||||    
T  6875598 taatataaaat 6875608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 8736988 - 8736830
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| ||||||||| |||| || | |||||| ||||||||||||   |||||    
T  8736988 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttac---atatt 8736892  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||||| ||||| || | |  ||| ||||| |||||| ||| || |||||||||||| |||||    
T  8736891 taatatgaaatgcac-agttccaagtcaaagttaccactttaaatttcttaacatgtgcaaat 8736830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 17409824 - 17409993
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 129  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  17409824 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 17409919  T
Q  130 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||||| |||||||||| |  |||| |||| || | ||||| || |||||| ||||| ||||| || ||||||    
T  17409920 ttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 17409993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 25843291 - 25843406
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaag-ttacactatat 129  Q
    |||||| |||||||| |||||| | | |||||||| ||||||||| || |||||||||||||||||  ||||   ||||||||||||| |||   |||||    
T  25843291 gtttgtctaacatgtacaatataatacatgttaaagcaactaaaagtagtaactttttattgaaaaacaacaaccatttgttaaaaagctta---tatat 25843387  T
Q  130 ttaatataaaatgtacaaa 148  Q
    ||||||||||||| |||||    
T  25843388 ttaatataaaatgcacaaa 25843406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 34941278 - 34941437
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||||||||| |||||| || || ||||   |||||||| ||| |||||||||||| |||| ||||  ||||| |||||||||||   ||||||    
T  34941278 gtttgtctaacatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagtta---tatatt 34941374  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
     |||| ||||||||||| |  |||| |||| |||| ||||| || |||||| ||||| |||||    
T  34941375 aaatacaaaatgtacaagttccaatgcaaaattactattttaaacttcttatcatgtgcaaat 34941437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 203
Target Start/End: Original strand, 49181074 - 49181241
Alignment:
Q  34 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatattta 132  Q
    |||| ||| |||||||||||| || |||||||   |||||||| ||  ||| ||| ||||||||  |||| | |||| || ||||||||||   ||||||    
T  49181074 ttgtctaaaatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttaca---tattta 49181170  T
Q  133 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||||||| |||| |  |||| ||||||||| |||||||| ||||||||| || ||||| || ||||||    
T  49181171 atataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaggtgcaaatttgcacatga 49181241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 37785001 - 37784879
Alignment:
Q  69 aactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttacca 167  Q
    |||||||| ||  ||||||||||||||||  || | | |||| |||||||||||||   ||||||| |||||||| ||||||  ||||  |||||||| |    
T  37785001 aactaaaagtagcaactttttattgaaaaacaataatcatttattaaaaagttaca---tatttaacataaaatgcacaaattacaatataaatttacta 37784905  T
Q  168 ttttgaaattcttaacatgttcaaat 193  Q
    ||||||| |||||||||||| |||||    
T  37784904 ttttgaacttcttaacatgtccaaat 37784879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 40049559 - 40049717
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || ||| ||||||| ||||  |||| ||||||   ||||| |||   |||||||    
T  40049559 gtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaagtttttatagaaaccaacaattatttaacaaaaaatta---tatattt 40049655  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||| |||||||  || |  |||| |||| |||| ||||| || |||||||||||| |||||    
T  40049656 aataaaaaatgttaaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaat 40049717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 23545476 - 23545589
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||| ||||| ||| |||| |||| |||||| || |||||||    ||||||    
T  23545476 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaagtt---ttatatt 23545572  T
Q  131 taatataaaatgtacaa 147  Q
    |||||| ||||||||||    
T  23545573 taatattaaatgtacaa 23545589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 27019260 - 27019373
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||| ||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  27019260 gtttgtctaacgtgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 27019356  T
Q  131 taatataaaatgtacaa 147  Q
    |||||| ||||||||||    
T  27019357 taatattaaatgtacaa 27019373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 10389445 - 10389380
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| ||||||||||||||||||| |||||| |  |||||||| || |||||||| ||||||||    
T  10389445 gtttgtctaacatgtgcaatattacacatgttatagtaactaaaagtattaacttttaattgaaaa 10389380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 33632379 - 33632267
Alignment:
Q  33 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatattt 131  Q
    ||||| |||||||||||| |||| | |||| ||||||||||| | || ||||||||| ||| |||| |||| |||||| || |||||||    |||||||    
T  33632379 tttgtctaacatgtgcaacattatacatgtaaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagtt---ttatattt 33632283  T
Q  132 aatataaaatgtacaa 147  Q
    ||||| ||||||||||    
T  33632282 aatattaaatgtacaa 33632267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 40681960 - 40682017
Alignment:
Q  43 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataa 100  Q
    |||||||||||| ||||||||||  ||||||||| || ||| ||||||||||||||||    
T  40681960 atgtgcaatattgcatatgttaagtcaactaaaaatagtaattttttattgaaaataa 40682017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 49228357 - 49228422
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || |||||||| ||||||||    
T  49228357 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaa 49228422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 19838866 - 19838756
Alignment:
Q  33 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattta 132  Q
    ||||| ||||||||| || ||| || |||||||||||||||| | |||||||||||| ||  ||| |||| |||||| || |||||||    ||||||||    
T  19838866 tttgtctaacatgtggaacattgcacatgttaaaacaactaatagtaataacttttt-ttttaaacaacaattatttattcaaaagtt---ttatattta 19838771  T
Q  133 atataaaatgtacaa 147  Q
    |||| ||||||||||    
T  19838770 atattaaatgtacaa 19838756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 52391298 - 52391457
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||| ||||| ||| || || ||||||||| |||||| | || ||||||||| |||||||  |||| |||||| || |||||||    ||||||    
T  52391298 gtttgtctaatatgtgtaatgttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttt---tatatt 52391394  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||    
T  52391395 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 52391457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 1378075 - 1378177
Alignment:
Q  88 ttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 187  Q
    |||||||||| | || |||||| |||||| ||||   |||||||||||| |||||||||| |  |||   |||||||||||||| || ||||||||||||    
T  1378075 ttattgaaaacatcaattatttattaaaatgtta---tatatttaatattaaatgtacaagtttcaagataaatttaccattttaaatttcttaacatgt 1378171  T
Q  188 tcaaat 193  Q
     |||||    
T  1378172 gcaaat 1378177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 203
Target Start/End: Original strand, 27362406 - 27362560
Alignment:
Q  47 gcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtac 145  Q
    |||| ||| |||||||||| | | |||||| || ||| |||||||||||||  || | |||||| | |||||| ||||   |||||||||| ||||| ||    
T  27362406 gcaacattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctaca---tatttaatatgaaatgcac 27362502  T
Q  146 aaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||  ||| ||||| |||||| ||| || |||||||||||| ||||| || ||||||    
T  27362503 aaattccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 27362560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 45742368 - 45742431
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaa 95  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| |||||    
T  45742368 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtattaactttttcttgaa 45742431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 13009909 - 13009820
Alignment:
Q  56 catatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaatgtacaa 147  Q
    ||||||||||||||||||||| || ||| ||||||||||||| ||| | ||||||  ||||||| ||   ||||||||||| ||||| |||||    
T  13009909 catatgttaaaacaactaaaagtattaagtttttattgaaaactaataattatttactaaaaagcta---tatatttaatacaaaatatacaa 13009820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 193
Target Start/End: Original strand, 39876844 - 39876989
Alignment:
Q  45 gtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgta 144  Q
    |||||||||| || |||||||   |||||||| || ||| ||||||||||||  |||| ||||||   |||||||||   ||||||| ||| |||||||     
T  39876844 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagtta---tatatttgatacaaaatgtt 39876940  T
Q  145 caaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    ||| |  |||| |||| |||| ||||| || |||||||||||| |||||    
T  39876941 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 39876989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 49332333 - 49332423
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagtta 121  Q
    |||||| |||||||||||||||| || |||||||   || ||||| ||||||||||| |||| ||||||  | |||||| |||||||||||    
T  49332333 gtttgtctaacatgtgcaatatttcacatgttaaggtaattaaaagtaataacttttcattgaaaaatattaattatttattaaaaagtta 49332423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 54495815 - 54495646
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||| |||||||  || | |||||| |||||||| ||||   ||||    
T  54495815 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaagctaca---tatt 54495719  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| ||||| |||| |  ||| | ||| |||||| ||| || |||||||||||| ||||| || ||||||    
T  54495718 taatatgaaatgcacaagttccaagttaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 54495646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 10658621 - 10658544
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttattt 109  Q
    |||||| ||||||||||||||||||| |||||||   |||||||| ||  || ||||||||||||  |||| ||||||    
T  10658621 gtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattattt 10658544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 10872766 - 10872689
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttattt 109  Q
    |||||| ||||||||||||||||||| |||||||   |||||||| ||  || ||||||||||||  |||| ||||||    
T  10872766 gtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattattt 10872689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 3728249 - 3728317
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataac-tttttattgaaaata 99  Q
    |||||| |||||||| |||||||  | |||||| ||||||||||| || |||| |||||||||||||||    
T  3728249 gtttgtctaacatgtacaatattgaacatgttataacaactaaaagtagtaacttttttattgaaaata 3728317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 35645126 - 35645071
Alignment:
Q  85 tttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaatg 142  Q
    ||||||||||||| ||||| |||||| |||||||||||   ||||||||||||||||||    
T  35645126 tttttattgaaaaataacaattatttattaaaaagtta---tatatttaatataaaatg 35645071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 55813920 - 55814023
Alignment:
Q  88 ttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatg 186  Q
    ||||||||||| |||| |||||| |||||||||||   ||||||||||| | |||||||||||  |||| |||| |||  ||||| || || ||||||||    
T  55813920 ttattgaaaatcaacaattatttattaaaaagtta---tatatttaatacagaatgtacaaatttcaatacaaaattattattttaaactttttaacatg 55814016  T
Q  187 ttcaaat 193  Q
    | |||||    
T  55814017 tgcaaat 55814023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 26682068 - 26682237
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataa-ctttttattgaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || |||||||||||||||||| || |||  ||||||||||||| |||| |||||| |||||||| |||||   |||    
T  26682068 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaacaacaattatttattaaaaagctacac---att 26682164  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||||||||| |||| |  ||| ||||| |||| | ||| || |||||||||||| ||||| || ||||||    
T  26682165 taatataaaatgcacaagttccaagtcaaagttactactttaaatttcttaacatgtgcaaatttgcacatga 26682237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 20514632 - 20514802
Alignment:
Q  32 gtttgtttaacatgtgcaa-tattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatat 129  Q
    |||||| |||||||||||| |||| || ||| |||| ||||| ||| || ||| || |||||||||| || || |||||| |||||||||||   |||||    
T  20514632 gtttgtctaacatgtgcaaatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagtta---tatat 20514728  T
Q  130 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||||||||||||||| |  |||  |||| |||||||||| || |||||||| ||| ||||| || ||||||    
T  20514729 ttaatataaaatgtacaagttccaagacaaacttaccattttaaatttcttaacctgtgcaaatatgcacatga 20514802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 6818017 - 6818186
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||||||||||||||||  ||||||||||  |||||||| || |||||||  |||| |||| |||| |||||| ||||||||||    |||| |    
T  6818017 gtttgtctaacatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt---ttatagt 6818113  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||||||||| |||| |  | || ||| ||||| ||||| || |||||||||||| ||||| || ||||||    
T  6818114 taatataaaatgcacaagttccgatacaattttactattttaaacttcttaacatgtacaaatttgcacatga 6818186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 31812113 - 31812282
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||||||| ||||||| | |||||| |||||||| |||   |||||    
T  31812113 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctac---atatt 31812209  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| ||||| |||| |  ||| ||||| |||||||||| || ||||||| |||| ||||| || ||||||    
T  31812210 taatatgaaatgcacaagttccaagtcaaaattaccattttaaacttcttaatatgtgcaaatttgcacatga 31812282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 3306232 - 3306064
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||| ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  3306232 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 3306136  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
     ||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  3306135 gatacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 3306064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 7750668 - 7750733
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||||||||||||| ||  ||||||||||||||||    
T  7750668 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagcaactttttattgaaaa 7750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 12131983 - 12132136
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaata-acagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || ||||||||  |||||||| ||  ||||||||||||||||   |||  ||||| |||||||||||   ||||||    
T  12131983 gtttgtctaacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagtta---tatatt 12132079  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 187  Q
    ||||||||||||| ||| |  |||| |||| |||| | ||| || ||||||||||||    
T  12132080 taatataaaatgttcaagttccaatacaaacttactactttaaatttcttaacatgt 12132136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 14816303 - 14816198
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||||||||||||  |||| ||| || ||||||| ||||   |||||    
T  14816303 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttac---atatt 14816207  T
Q  131 taatataaa 139  Q
    |||||||||    
T  14816206 taatataaa 14816198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 14829437 - 14829542
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||||||||||||  |||| ||| || ||||||| ||||   |||||    
T  14829437 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttac---atatt 14829533  T
Q  131 taatataaa 139  Q
    |||||||||    
T  14829534 taatataaa 14829542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 38843704 - 38843817
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  38843704 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 38843800  T
Q  131 taatataaaatgtacaa 147  Q
    |||||| ||||||||||    
T  38843801 taatattaaatgtacaa 38843817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 2161388 - 2161556
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  2161388 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 2161484  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||  ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  2161485 aattcaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 2161556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 11923015 - 11923080
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || | |||||||||||| ||| | ||||||||||||||||||    
T  11923015 gtttgtctaacatgtgcaatattgcacaagttaaaacaactgaaaatgataactttttattgaaaa 11923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 38527821 - 38527886
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| ||||||||||| ||||||||    
T  38527821 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaa 38527886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 34741813 - 34741730
Alignment:
Q  61 gttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaa 147  Q
    |||||||||||||||| ||| ||||||| |||||||| || | |||||| ||||||| |||   |||||||||||||||||| ||||    
T  34741813 gttaaaacaactaaaaataacaacttttaattgaaaacaataattatttattaaaaaatta---tatatttaatataaaatgcacaa 34741730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 8284747 - 8284660
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaag 118  Q
    |||||| ||||||||||| |||| || |||||||| ||||||||| || ||||||||||||  |||| |||| |||||| ||||||||    
T  8284747 gtttgtctaacatgtgcagtattgcacatgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaag 8284660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 5298077 - 5298157
Alignment:
Q  40 aacatgtgcaatattacatatgttaaaacaactaaaattaataa---ctttttattgaaaataacagttatttgttaaaaa 117  Q
    |||||||||||||||||| |||||||||| ||||||| ||| ||    ||||||||||||| |||| |||||| |||||||    
T  5298077 aacatgtgcaatattacacatgttaaaactactaaaactaacaaattttttttattgaaaacaacaattatttattaaaaa 5298157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 9580287 - 9580134
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||| |||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || ||||   | | ||||||    
T  9580287 gtttgtctaatatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaa---aaattatatt 9580191  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 187  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || ||||||||||||    
T  9580190 taatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgt 9580134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 35678452 - 35678347
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||| ||||||||  |||| ||| || ||||||| ||||   |||||    
T  35678452 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttac---atatt 35678356  T
Q  131 taatataaa 139  Q
    |||||||||    
T  35678355 taatataaa 35678347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 7140636 - 7140571
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||||||||||||    
T  7140636 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaa 7140571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 9824959 - 9825024
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||| |||||||||  |||||||||  ||| |||||||| |||||||||||||||||    
T  9824959 gtttgtctaacatatgcaatattgtatatgttaatgcaattaaaattagtaactttttattgaaaa 9825024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 12189766 - 12189701
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    ||||||||||||||||||  ||| || |||||||||||||||| | || ||||||||| |||||||    
T  12189766 gtttgtttaacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaa 12189701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 12434194 - 12434129
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    ||||||||||||||||||  ||| || |||||||||||||||| | || ||||||||| |||||||    
T  12434194 gtttgtttaacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaa 12434129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 13328118 - 13328053
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || |||||||| ||||||||    
T  13328118 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaa 13328053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 16445893 - 16445801
Alignment:
Q  52 attacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtaca 146  Q
    ||||||||||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    |||||||||||| |||||||||    
T  16445893 attacatatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatttaatattaaatgtaca 16445801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 203
Target Start/End: Complemental strand, 39024998 - 39024866
Alignment:
Q  68 caactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttacca 167  Q
    ||||||||| |||||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||||||||||| ||||||  ||| ||||| |||| |    
T  39024998 caactaaaagtaataactttttattgaaaccaacaattaattattaaaaatctac---atagttaatataaaatgcacaaattccaagtcaaagttacta 39024902  T
Q  168 ttttgaaattcttaacatgttcaaatctgtacatga 203  Q
     ||| || |||||| ||||| ||||| || ||||||    
T  39024901 ctttaaacttcttatcatgtgcaaatttgcacatga 39024866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 40210998 - 40210933
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || |||||||| ||||||||    
T  40210998 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaa 40210933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 45005970 - 45006059
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagtt 120  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    
T  45005970 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt 45006059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 11947076 - 11947016
Alignment:
Q  33 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg 93  Q
    ||||| |||||||| ||||||| || | |||||||||||||||| | ||||||||||||||    
T  11947076 tttgtctaacatgtacaatattgcacaagttaaaacaactaaaaatgataactttttattg 11947016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 9743862 - 9743967
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||||||||||||||||    ||||||| |||||||||| || ||| |||||||||||||  |||| |||||| || |||||||||   |||||    
T  9743862 gtttgtctaacatgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttac---atatt 9743957  T
Q  131 taatataaaa 140  Q
    ||||||||||    
T  9743958 taatataaaa 9743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 10974725 - 10974619
Alignment:
Q  39 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatata 137  Q
    |||||| |||| ||||  |||||||||| ||||||||| || |||| ||||||||||||  || |  ||||| ||||||| |||||   |||||||||||    
T  10974725 taacatatgcactattgtatatgttaaagcaactaaaagtagtaacattttattgaaaaacaataactatttattaaaaaattaca---tatttaatata 10974629  T
Q  138 aaatgtacaa 147  Q
    ||||||||||    
T  10974628 aaatgtacaa 10974619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 11117175 - 11117129
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaatt 78  Q
    |||||| |||||||||||||||| || |||||||| |||||||||||    
T  11117175 gtttgtctaacatgtgcaatattgcacatgttaaagcaactaaaatt 11117129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 32186186 - 32186295
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||||||||||| |||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||| | || |||||||    ||||||    
T  32186186 gtttgtttaacatgagcaacattgcaaatgttaaaacaactaatagtagtaactttttcttagaaaacaacatttatatattcaaaagtt---ttatatt 32186282  T
Q  131 taatataaaatgt 143  Q
    |||||| ||||||    
T  32186283 taatattaaatgt 32186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 36967248 - 36967079
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| |||  | ||||||| |||||||| | || ||||||||| ||| |||| |||| |||| | || |||||||    ||||||    
T  36967248 gtttgtctaacatgtgcaacattgtacatgttaagacaactaatagtagtaactttttcttggaaaacaacaattatatattcaaaagttt---tatatt 36967152  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| |||||| ||| |  |||| |||| || | ||||| || |||||||||||| ||||| || ||||||    
T  36967151 taatattaaatgtgcaagtttcaatacaaagtttctattttaaacttcttaacatgtgcaaatttgcacatga 36967079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 37523756 - 37523806
Alignment:
Q  30 ttgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaa 80  Q
    |||||||| |||||||| ||||||| || ||||||||||| ||||||||||    
T  37523756 ttgtttgtctaacatgtacaatattgcacatgttaaaacagctaaaattaa 37523806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 38213123 - 38213081
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaa 74  Q
    ||||||||||||||||||| ||| || ||||||||||||||||    
T  38213123 gtttgtttaacatgtgcaacattgcacatgttaaaacaactaa 38213081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 44091346 - 44091404
Alignment:
Q  59 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 117  Q
    ||||||||||||| |||| || ||| ||||||||||||| |||| |||||| |||||||    
T  44091346 atgttaaaacaacgaaaagtattaattttttattgaaaacaacaattatttattaaaaa 44091404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 10129104 - 10129169
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||   ||||||||||| ||| |||| ||||||||    
T  10129104 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaa 10129169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 12346006 - 12346071
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| | |||||||||| |||||| |||||||||||| ||| | || ||||||||| |||||||    
T  12346006 gtttgtctgacatgtgcaacattacacatgttaaaacaattaatagtagtaactttttcttgaaaa 12346071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 45516316 - 45516373
Alignment:
Q  59 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaa 116  Q
    ||||||| | |||||||| || |||||||||||||||| ||||| |||||| ||||||    
T  45516316 atgttaagataactaaaagtagtaactttttattgaaactaacaattatttattaaaa 45516373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 35583368 - 35583453
Alignment:
Q  34 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttt---tattgaaaataacagttatttgttaaaaa 117  Q
    |||| |||||||| ||||||| || |||||||||||  |||||| || |||||||   ||||||||| |||| ||||||||||||||    
T  35583368 ttgtctaacatgtacaatattgcacatgttaaaacatttaaaat-aacaacttttatttattgaaaacaacaattatttgttaaaaa 35583453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 40568314 - 40568378
Alignment:
Q  33 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    ||||| |||||  ||||||||| || |||||||||||||||||| |  |||||||||||| ||||    
T  40568314 tttgtctaacacatgcaatatttcacatgttaaaacaactaaaagttgtaactttttattaaaaa 40568378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 15411800 - 15411632
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || ||| ||||||||| |||| |||| | |||| |||||||| |||   |||||    
T  15411800 gtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctac---atatt 15411704  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatg 202  Q
    |||||||||||| |||| |  |||  |||| |||| ||||| || |||||||||||| ||||| || |||||    
T  15411703 taatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaatttgcacatg 15411632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 9747317 - 9747470
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||| |||| ||||||||  |||||||| || ||||| ||||||| |||| ||||  ||||||| |||||| |||   |||||    
T  9747317 gtttgtctaacatgtgcaatagtacacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctac---atatt 9747413  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 187  Q
    |||||||||||| |||| |  |||  |||| |||| ||||| || ||||||||||||    
T  9747414 taatataaaatgaacaagttccaagacaaaattactattttaaacttcttaacatgt 9747470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 12438825 - 12438740
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 117  Q
    |||||| |||||||||||||||| |||||||| | |||||||||| ||||||||||| ||| |||  |||| |||||| |||||||    
T  12438825 gtttgtataacatgtgcaatattgcatatgttcagacaactaaaaataataacttttcattaaaaccaacaattatttattaaaaa 12438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 5583735 - 5583577
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  5583735 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 5583639  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||    
T  5583638 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 5583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 14377425 - 14377530
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||||| |||||||||| || |||||||  ||||||||| || |||||||||||||||||  |||| ||||||||| |||||||||   |||||    
T  14377425 gtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgtt-aaaagttac---atatt 14377520  T
Q  131 taatataaaa 140  Q
    ||||||||||    
T  14377521 taatataaaa 14377530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 203
Target Start/End: Original strand, 45062207 - 45062367
Alignment:
Q  41 acatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatataaa 139  Q
    |||||| |||||||| |||||||||||||| ||||| |  ||||||||||||  |||| || | |||||| ||||||||||||   || |||||||||||    
T  45062207 acatgtacaatattaaatatgttaaaacaattaaaagtggtaactttttattaaaaaacaaaaattatttattaaaaagttac---atgtttaatataaa 45062303  T
Q  140 atgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||| |||| |  |||   ||| |||| |||||||| ||||||| |||| ||||| || ||||||    
T  45062304 atgcacaagttccaaaataaagttactattttgaacttcttaatatgtgcaaatttgcacatga 45062367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 43806360 - 43806519
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||| ||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  43806360 gtttgtctaacatgtgcaacattgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 43806456  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || || ||||||||| |||||    
T  43806457 taatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatgtgcaaat 43806519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 27665221 - 27665116
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  27665221 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 27665126  T
Q  131 taatataaaa 140  Q
    ||||||||||    
T  27665125 taatataaaa 27665116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 23932565 - 23932678
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||  |||| |||| |||| |||||| ||||||||||    |||| |    
T  23932565 gtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt---ttatagt 23932661  T
Q  131 taatataaaatgtacaa 147  Q
    |||||||||||| ||||    
T  23932662 taatataaaatgcacaa 23932678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 34214129 - 34213968
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||||||||  |||| | || |||||||| ||||||||| || ||| |||||||||||||  |||| ||||||  |||||||||| | ||| ||    
T  34214129 gtttgtctaacatgtataatactgcacatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattattttataaaaagttata-tatttt 34214031  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    ||||| ||||||| ||| |  ||||  ||| |||| ||||| || |||||||||||| |||||    
T  34214030 taataaaaaatgttcaagttccaatgaaaaattactattttaaatttcttaacatgtgcaaat 34213968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 34817544 - 34817649
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||| ||||||||| ||  | |||||| |||||||| ||  |||| ||||||||||| |||| |||||| |||||||||||   |||||||    
T  34817544 gtttgtctaacatatgcaatattgcacgtattaaaataactaaaaatatcaactatttattgaaaacaacaattatttattaaaaagtta---tatattt 34817640  T
Q  132 aatataaaa 140  Q
    |||| ||||    
T  34817641 aataaaaaa 34817649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 39367059 - 39367149
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagtta 121  Q
    |||||| |||||||| ||  ||||| ||||||||| ||||||||||||| ||  ||||||||||||| || | |||||| |||||||||||    
T  39367059 gtttgtctaacatgtacaccattacgtatgttaaagcaactaaaattaacaaaattttattgaaaatcaataattatttattaaaaagtta 39367149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 12016667 - 12016732
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||||||||||||    
T  12016667 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaa 12016732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 24729718 - 24729586
Alignment:
Q  69 aactaaaattaataactttttattgaaaataac-agttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttacca 167  Q
    |||||||| || ||| ||||||||||||||||  | |||||| |||||||||||   | || |||||| ||||| |||||||  |||| |||| |||| |    
T  24729718 aactaaaaatagtaaatttttattgaaaataaataattatttattaaaaagtta---tgtaattaatacaaaatatacaaattccaatgcaaagttacta 24729622  T
Q  168 ttttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| || |||||||||||| ||||| || ||||||    
T  24729621 ttttaaatttcttaacatgtgcaaatttgcacatga 24729586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 187
Target Start/End: Complemental strand, 2580082 - 2579983
Alignment:
Q  85 tttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaaca 184  Q
    |||||||| ||||||||| |||||||||||||| ||   | |||||||| ||||||| ||||||   |||| |||| |||| | |||||| |||||||||    
T  2580082 tttttattaaaaataacaattatttgttaaaaaatt---caatatttaacataaaatatacaaaattcaatacaaacttactagtttgaacttcttaaca 2579986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 7720116 - 7720180
Alignment:
Q  33 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    ||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| |||||||    
T  7720116 tttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttgaaaa 7720180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 2051639 - 2051721
Alignment:
Q  57 atatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatttaatataaaat 141  Q
    |||||||||||||||||||||||  || ||||||||| |||| |||| |||||| ||||||| |||    ||||||||||||||||    
T  2051639 atatgttaaaacaactaaaattagcaagtttttattgaaaaacaacaattatttattaaaaattta---aatatttaatataaaat 2051721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 43388944 - 43388857
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaag 118  Q
    |||||| ||| |||||||||||| || || ||||| ||||||||| ||  || |||||||||||||| |||| |||||| ||||||||    
T  43388944 gtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaaag 43388857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 36612909 - 36612796
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| |  ||||||||| |||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  36612909 gtttgtctaacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagtt---ttatatt 36612813  T
Q  131 taatataaaatgtacaa 147  Q
    |||||| ||||||||||    
T  36612812 taatattaaatgtacaa 36612796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 36620760 - 36620647
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| |  ||||||||| |||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  36620760 gtttgtctaacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagtt---ttatatt 36620664  T
Q  131 taatataaaatgtacaa 147  Q
    |||||| ||||||||||    
T  36620663 taatattaaatgtacaa 36620647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 36909553 - 36909503
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaata 82  Q
    |||||| |||||| |||||||||||| |||||||||||| ||||| |||||    
T  36909553 gtttgtctaacatatgcaatattacacatgttaaaacaattaaaagtaata 36909503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 39904225 - 39904159
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 98  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| |||||||||    
T  39904225 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaat 39904159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 4579966 - 4579901
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| ||||||||||||||||||| |||||||   |||||||  || |||||||| ||||||||    
T  4579966 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatatagtaacttttcattgaaaa 4579901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 7757963 - 7757811
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||| |||  | |||||||   |||||||| ||| || |||||||| |||  |||| ||||||   |||||||||   |||||||    
T  7757963 gtttgtctaacatgtgcaaaattgtacatgttaaggtaactaaaagtaacaagtttttattaaaaccaacaattatttaacaaaaagtta---tatattt 7757867  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 187  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || ||||||||||||    
T  7757866 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgt 7757811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 16754971 - 16755028
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 89  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || |||||||||    
T  16754971 gtttgtctaacatgtgcaacattgcaaatgttaaaacaactaatagtagtaacttttt 16755028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 16919331 - 16919266
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||||||||| |||||||    
T  16919331 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 16919266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 19228426 - 19228491
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  19228426 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 19228491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 22705455 - 22705520
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  22705455 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 22705520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 26003669 - 26003612
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 89  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || |||||||||    
T  26003669 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttt 26003612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 25998172 - 25998088
Alignment:
Q  40 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttaca 123  Q
    |||||||||| |||| || ||||||||  |||||||| | | |||||||||||| |||| |||| |||||| |||||||| ||||    
T  25998172 aacatgtgcattattgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaaaagataca 25998088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 26003431 - 26003355
Alignment:
Q  127 tatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||||||| ||||||||||||  |||| |||| || | ||||| || |||||||||||| ||||| || ||||||    
T  26003431 tatttaatatcaaatgtacaaatttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 26003355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 30623326 - 30623477
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| |||||| |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || |||||||    ||||||    
T  30623326 gtttgtctaacatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagtt---ttatatt 30623422  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacat 185  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || ||||||||||    
T  30623423 taatatcaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacat 30623477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 6016856 - 6017025
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || ||| ||| ||| |||||| || |||||||| |||| |||| |||| |||||| |||||||||||   ||||||    
T  6016856 gtttgtctaacatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagtta---tatatt 6016952  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || || ||||||||| ||||| || ||||||    
T  6016953 taatatgaaatgcacaagttccaagtcaaagttaccactttaaactttttaacatgtgcaaatttgcacatga 6017025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 29730295 - 29730383
Alignment:
Q  49 aatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatttaatataaa 139  Q
    |||||| ||||||||||| | | |||||||||||| ||||||||| |||| ||||||||||| |||||||||||   |||||||||||||||    
T  29730295 aatattgcatatgttaaagctattaaaattaataagtttttattgaaaaacaacagttatttattaaaaagtta---tatatttaatataaa 29730383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 8977644 - 8977485
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  ||| ||| ||||||||  |||| | |||| || ||||||||||   ||||    
T  8977644 gtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttaca---tatt 8977548  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||||||||||| |||| |  |||| ||||||||| |||||||| ||||||||| || |||||    
T  8977547 taatataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaagtgcaaat 8977485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 34692354 - 34692523
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||  | | |||||| || |||||||    ||||||    
T  34692354 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagtt---ttatatt 34692450  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| ||||| || ||||||    
T  34692451 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 34692523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 14228303 - 14228135
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   || ||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  14228303 gtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 14228207  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  14228206 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 14228135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 28943946 - 28943778
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   || ||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  28943946 gtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 28943850  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  28943849 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 28943778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 203
Target Start/End: Original strand, 10887031 - 10887198
Alignment:
Q  34 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatattta 132  Q
    |||| |||||||||||| ||| || ||||||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||||    
T  10887031 ttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tattta 10887127  T
Q  133 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||||||  |||| |  ||| ||||| |||||| ||| || |||||||||||| ||||| || ||||||    
T  10887128 atataaaatacacaagttccaaatcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 10887198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 1017956 - 1017803
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||| | || ||| | ||| |||||||| || ||||||||  |||||||  |||| |||||| ||||||| |||||   ||||    
T  1017956 gtttgtctaacatgtgcaatactgcacatgattaaataactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttaca---tatt 1017860  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 187  Q
    |||||||||||| |||| |  ||| ||||| |||| | ||| || ||||||||||||    
T  1017859 taatataaaatgcacaactttcaagtcaaagttactactttaaacttcttaacatgt 1017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 1814959 - 1814894
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||| ||||||||| ||| |  |||||||||||||    
T  1814959 gtttgtctaacatgtgcaatattgcacatgttaaagcaactaaaagtaacatatttttattgaaaa 1814894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 3485776 - 3485711
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||| || ||||||||||||||||||  |||||||||||  | ||||||||||||||    
T  3485776 gtttgtctaacatatgtaatattacatatgttaaaggaactaaaattagcacctttttattgaaaa 3485711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 24979327 - 24979262
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| |||||||    
T  24979327 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaataatagtaactttttcttgaaaa 24979262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 17596315 - 17596370
Alignment:
Q  34 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 89  Q
    |||| |||||||||||||||| || ||||||| |||||||||| || |||||||||    
T  17596315 ttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaacttttt 17596370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 33017725 - 33017883
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||||||  || |||||||| |||  |||| ||||||   |||||||||   |||||||    
T  33017725 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagcaagtttttattaaaaccaacaattatttaacaaaaagtta---tatattt 33017821  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||| ||||||| ||| |  | || |||| |||| ||||| || || ||||||||| |||||    
T  33017822 aatacaaaatgttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaat 33017883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 29863480 - 29863311
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||  |||| |||| || | |||||| ||||||||||    |||| |    
T  29863480 gtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaaagtt---ttatagt 29863384  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||||||||| | || |  | |  ||| ||||| ||||| || |||||||||||| ||||| || ||||||    
T  29863383 taatataaaatgcaaaagttccgacacaattttactattttaaacttcttaacatgtgcaaatttgcacatga 29863311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 5363070 - 5363005
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  5363070 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 5363005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 17552764 - 17552596
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||| ||||  |||| ||||||   ||||| |||   |||||||    
T  17552764 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatcgaaaccaacaattatttaacaaaaaatta---tatattt 17552668  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| ||| |  |||| || | |||| ||||| || |||||||||||| ||||| || ||||||    
T  17552667 aatacaaaatgttcaagttccaatgcataattactattttaaatttcttaacatgtgcaaatttgcacatga 17552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 30839782 - 30839950
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  30839782 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 30839878  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  30839879 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 30839950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 36597580 - 36597748
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  36597580 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagtta---tatattt 36597676  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  36597677 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 36597748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 18841883 - 18841768
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  18841883 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagtt---ttatatt 18841787  T
Q  131 taatataaaatgtacaaat 149  Q
    |||||| ||||||||||||    
T  18841786 taatattaaatgtacaaat 18841768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 203
Target Start/End: Complemental strand, 8103755 - 8103589
Alignment:
Q  34 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 133  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  8103755 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 8103659  T
Q  134 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| ||||| || ||||||    
T  8103658 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 8103589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 3398220 - 3398389
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||  | | |||||| || |||||||    ||||||    
T  3398220 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagtt---ttatatt 3398316  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| ||||| || ||||||    
T  3398317 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 3398389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 5958301 - 5958196
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||||||||||||||||||| ||||||||  |||||||| || ||| |||| ||||||||| |||| ||| || ||||||| ||||   |||||    
T  5958301 gtttgtctaacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaattaattattaaaaatttac---atatt 5958205  T
Q  131 taatataaa 139  Q
    |||||||||    
T  5958204 taatataaa 5958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 40512952 - 40513120
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   ||||| || || ||| ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  40512952 gtttgtctaacatgtgcaatattgcacatgttaaggtaactagaagtagtaagtttttattgaaatcaacaattatttaacaaaaagtta---tatattt 40513048  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
     ||| ||||| | |||||  |||| |||| |||| ||||| || || ||||||||| ||||| |||||||||    
T  40513049 gatacaaaatattcaaattccaatgcaaagttactattttaaattttttaacatgtgcaaatttgtacatga 40513120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 11636732 - 11636837
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||| ||||||||  |||| ||| || ||||||| ||||   |||||    
T  11636732 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttac---atatt 11636828  T
Q  131 taatataaa 139  Q
    |||||||||    
T  11636829 taatataaa 11636837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 10665134 - 10665053
Alignment:
Q  40 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagtta 121  Q
    |||||||| |||||| || |||||||   |||||||| ||||||||||| ||||||||||  | |||||| |||||||||||    
T  10665134 aacatgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaatattaattatttattaaaaagtta 10665053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 11360186 - 11360243
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 89  Q
    |||| |||||||||| |||||||||| |||||||||||||||||| || ||| |||||    
T  11360186 gtttatttaacatgttcaatattacacatgttaaaacaactaaaagtagtaatttttt 11360243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 11250134 - 11250090
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 76  Q
    ||||||||||||||||||||||| || |||||||| |||||||||    
T  11250134 gtttgtttaacatgtgcaatattgcacatgttaaagcaactaaaa 11250090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 140
Target Start/End: Original strand, 28629890 - 28629984
Alignment:
Q  43 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaa 140  Q
    |||| ||||||| || |||||||| ||||||||| ||||||||||| ||||||||  |||| |||||| || |||||||||   |||||||||||||||    
T  28629890 atgtacaatattgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattatttatt-aaaagttac---atatttaatataaaa 28629984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 33072677 - 33072721
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 76  Q
    ||||||||||||||||||||||| || |||||||| |||||||||    
T  33072677 gtttgtttaacatgtgcaatattgcacatgttaaatcaactaaaa 33072721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 15241065 - 15240959
Alignment:
Q  94 aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||| |||| |||||| ||||||| |||   |||||||||||||| ||| ||||||  |||| ||||||||  |||||||| || ||||||||| |||||    
T  15241065 aaaacaacaattatttattaaaaaatta---tatatttaatataacatgcacaaatttcaatacaaatttaatattttgaactttttaacatgtacaaat 15240969  T
Q  194 ctgtacatga 203  Q
     || ||||||    
T  15240968 ttgcacatga 15240959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 11375972 - 11376026
Alignment:
Q  44 tgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 98  Q
    ||||||||||| || |||||||| ||||||||| || |||||||| |||||||||    
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaat 11376026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 15820317 - 15820379
Alignment:
Q  125 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 187  Q
    ||||||||||| ||||||| |||||  |||| ||||||||| |||||||| ||||| ||||||    
T  15820317 tatatttaatagaaaatgttcaaatttcaatacaaatttactattttgaatttcttgacatgt 15820379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 34578012 - 34578078
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 98  Q
    |||||| |||||||||||||||| || |||||||   |||||||| |||||| |||| |||||||||    
T  34578012 gtttgtctaacatgtgcaatattccacatgttaaggtaactaaaagtaataatttttcattgaaaat 34578078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 142
Target Start/End: Complemental strand, 40309580 - 40309497
Alignment:
Q  59 atgttaaaacaactaaaattaataactttttattg---aaaataacagttatttgttaaaaagttacactatatttaatataaaatg 142  Q
    |||||||||||||||||| ||| ||  ||||||||   ||||||||| | |||| |||||||||||   ||||||||||||||||||    
T  40309580 atgttaaaacaactaaaagtaacaatattttattgaaaaaaataacaataatttattaaaaagtta---tatatttaatataaaatg 40309497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 2795524 - 2795589
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  2795524 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 2795589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 24014865 - 24014800
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||| ||| || |||||||||||||||||| ||  || |||||||| ||||    
T  24014865 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaaaagtataaagtttttattcaaaa 24014800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 2571269 - 2571437
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  2571269 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 2571365  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||| || ||||||    
T  2571366 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 2571437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 10307767 - 10307935
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 131  Q
    |||||| |||||||||||||||| || ||| |||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  10307767 gtttgtctaacatgtgcaatattgcacatgataaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagtta---tatattt 10307863  T
Q  132 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||| ||||||| ||| |  |||| ||||||||| ||||| || |||||||||||| ||||| || ||||||    
T  10307864 aatacaaaatgttcaagttccaatgcaaatttactattttaaatttcttaacatgtgcaaatttgcacatga 10307935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 20938056 - 20938162
Alignment:
Q  31 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatat 129  Q
    ||||||| |||||||||||||||| || |||||||   |||||||| |||||||||||||||||||| ||||| |||||  ||||||| ||||   ||||    
T  20938056 tgtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaaa-ttac---atat 20938151  T
Q  130 ttaatataaaa 140  Q
    |||||||||||    
T  20938152 ttaatataaaa 20938162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 53794781 - 53794872
Alignment:
Q  49 aatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaatg 142  Q
    |||||| || |||||||| ||||||||| |||||||| ||||||||||| ||||| | |||| ||||||||||||   |||||||||||||||||    
T  53794781 aatattgcacatgttaaaccaactaaaaataataactatttattgaaaagtaacaataatttattaaaaagttac---atatttaatataaaatg 53794872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 54527884 - 54527725
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  54527884 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 54527788  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||||| |||||||||| |  |||| |||| ||   ||||| || |||||||||||| |||||    
T  54527787 taatattaaatgtacaagttccaatacaaaatttatattttaaatttcttaacatgtgcaaat 54527725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 2379238 - 2379162
Alignment:
Q  41 acatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagt 119  Q
    |||||||||||||| || |||||||||||||||||| || ||| |||||||||  ||||||| |||||| |||||||||    
T  2379238 acatgtgcaatattgcacatgttaaaacaactaaaagtagtaagtttttattg--aataacaattatttattaaaaagt 2379162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 193
Target Start/End: Complemental strand, 38786468 - 38786343
Alignment:
Q  64 aaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaattt 163  Q
    ||||||||||||| || ||| |||||||||||||||||| |||||| |||||||  |||||   ||||| ||||||||  ||||||  ||| ||||| ||    
T  38786468 aaaacaactaaaaatagtaattttttattgaaaataacaattatttattaaaaa-atacac---atttagtataaaatccacaaatttcaaatcaaaatt 38786373  T
Q  164 accattttgaaattcttaacatgttcaaat 193  Q
    || ||||| || |||||||||||| |||||    
T  38786372 actattttaaacttcttaacatgtgcaaat 38786343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 38389447 - 38389616
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||||||| |||| || | |||||| |||||||| |||   |||||    
T  38389447 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctac---atatt 38389543  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| ||||| || ||||||    
T  38389544 taatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 38389616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 50204403 - 50204572
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||| ||||| || |||||||||| |||| | || |||||||    ||||||    
T  50204403 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttggaaaataacaattatatattcaaaagtt---ttatatt 50204499  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| |||||||||  |  |||| |||| || | ||||| || |||||||||||| ||||| || ||||||    
T  50204500 taatattaaatgtacaggttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 50204572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 24569408 - 24569324
Alignment:
Q  39 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttac 122  Q
    ||||||||||||||||  | ||||||| ||||||| || |||||||||||||||| |||| | || |||||| ||||||||||||    
T  24569408 taacatgtgcaatattggacatgttaagacaactacaaataataactttttattgaaaaacatcaattatttattaaaaagttac 24569324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 147
Target Start/End: Complemental strand, 46492519 - 46492408
Alignment:
Q  34 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatattta 132  Q
    |||||||| |||||||||||| || |||||||| ||||||||| |  ||| ||||||||| |||| |||| |||||| ||||  |||||   ||||||||    
T  46492519 ttgtttaaaatgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgagtta---tatattta 46492423  T
Q  133 atataaaatgtacaa 147  Q
    ||| |||||||||||    
T  46492422 atacaaaatgtacaa 46492408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 51618050 - 51618216
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || ||||||||||||||||||  |  || |||||| || |||| |||| |||||| ||||||   ||   ||||||    
T  51618050 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaaa---ta---tatatt 51618143  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    ||||| ||||||||||| |  |||| |||| |||| ||||  || |||||||||||| ||||| || ||||||    
T  51618144 taatacaaaatgtacaagttccaatgcaaagttacaatttgaaacttcttaacatgtgcaaatttgcacatga 51618216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 11610915 - 11611020
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  11610915 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 11611010  T
Q  131 taatataaaa 140  Q
    ||||||||||    
T  11611011 taatataaaa 11611020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 37444149 - 37444232
Alignment:
Q  34 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 117  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||    
T  37444149 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaatcaacaattaattattaaaaa 37444232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 40330468 - 40330381
Alignment:
Q  31 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaag 118  Q
    |||||||||||||| ||||| |||||  ||| |||||||| ||||| || |||||||| |||||||| |||| | |||| ||||||||    
T  40330468 tgtttgtttaacatatgcaacattacgcatgataaaacaattaaaaatagtaacttttaattgaaaacaacaataatttattaaaaag 40330381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 37055544 - 37055455
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagtt 120  Q
    |||||| |||||||| ||||||| |||||||||||  |||||||| || |||||||  |||| |||| |||| |||||| ||||||||||    
T  37055544 gtttgtctaacatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt 37055455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 13495294 - 13495453
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 130  Q
    |||||| ||||||||||||  || || |||||||   |||||||| || ||| |||||||||||||| |||| |||||| |||||||  |||   |||||    
T  13495294 gtttgtctaacatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctac---atatt 13495390  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||    
T  13495391 taatataaaatgcacaagttccaagtcaaaattactactttaaacttcttatcatgtgcaaat 13495453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 42180052 - 42180211
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||  | | |||||| || |||||||    ||||||    
T  42180052 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagtt---ttatatt 42180148  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 193  Q
    |||||| |||||||||| |  |||| |||| ||   ||||| || |||||||||||| |||||    
T  42180149 taatattaaatgtacaagttccaatacaaaatttttattttaaacttcttaacatgtgcaaat 42180211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 47386922 - 47387013
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg--aaaataacagttatttgttaaaaagtta 121  Q
    |||||| |||||||||||||||| |  || ||||| ||||||||| || ||| |||||||||  |||| |||| |||||| |||||||||||    
T  47386922 gtttgtctaacatgtgcaatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaaaaaaacaattatttattaaaaagtta 47387013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 8497601 - 8497550
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataa 83  Q
    |||| |||||||||||||| ||| || |||||||||||||||||| ||||||    
T  8497601 gtttatttaacatgtgcaacattgcacatgttaaaacaactaaaagtaataa 8497550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 46845618 - 46845531
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaag 118  Q
    |||||| ||| |||||||||||| || || ||||| ||||||||| ||  || |||||||||||||| |||| |||||| ||||||||    
T  46845618 gtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaaag 46845531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 13879973 - 13879899
Alignment:
Q  43 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 117  Q
    ||||||||||||||| || |||||| |||| ||| | | ||||||||||||||||  ||| |||||| |||||||    
T  13879973 atgtgcaatattacacatcttaaaataactgaaagtgaaaactttttattgaaaaccacaattatttattaaaaa 13879899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 26200799 - 26200733
Alignment:
Q  31 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    ||||||| |||||| ||||||||| ||||||||||| ||||||  | || |||||||||| ||||||    
T  26200799 tgtttgtataacatttgcaatattgcatatgttaaagcaactaggagtagtaactttttactgaaaa 26200733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 30214187 - 30214103
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaa 116  Q
    |||||| ||||||||||||||||||| ||  |||  ||||||||| || |||||||| ||||||||| |||| |||||| ||||||    
T  30214187 gtttgtctaacatgtgcaatattacacattctaaggcaactaaaa-tagtaacttttcattgaaaatcaacaattatttattaaaa 30214103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 32321899 - 32321835
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| ||||||||| |||||| |||||||||||| |||||||| ||  ||| ||||||||||||    
T  32321899 gtttgtataacatgtgtaatattgcatatgttaaaagaactaaaaatatcaac-ttttattgaaaa 32321835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 51401531 - 51401607
Alignment:
Q  125 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacat 201  Q
    |||||||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| ||||| |||||||    
T  51401531 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgtacat 51401607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 37292 - 37123
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 130  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||||||| |||| || | |||||| |||||||| |||   |||||    
T  37292 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctac---atatt 37196  T
Q  131 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatctgtacatga 203  Q
    |||||| ||||| |||| |  ||| ||||| ||| || ||| || |||||||||||| ||||| || ||||||    
T  37195 taatatgaaatgcacaagttccaagtcaaagttatcactttaaacttcttaacatgtgcaaatttgcacatga 37123  T

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Target: scaffold0631 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 443 - 486
Alignment:
Q  33 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 76  Q
    |||||||||||||||||||||| || |||||||| |||||||||    
T  443 tttgtttaacatgtgcaatattgcacatgttaaatcaactaaaa 486  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 13829 - 13723
Alignment:
Q  39 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatata 137  Q
    |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| || |||||||| || |||||||    ||||||||||||     
T  13829 taacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaaaagttatttatttaaaagtt---ttatatttaatatt 13733  T
Q  138 aaatgtacaa 147  Q
     |||||||||    
T  13732 taatgtacaa 13723  T

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Target: scaffold0618 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 8564 - 8506
Alignment:
Q  59 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 117  Q
    ||||||||||||| |||| || ||| ||||||||||||| |||| |||||| |||||||    
T  8564 atgttaaaacaacgaaaagtattaattttttattgaaaacaacaattatttattaaaaa 8506  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 94195 - 94086
Alignment:
Q  33 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatattt 131  Q
    ||||| |||||| ||||| ||| || |||||||| ||||||||| || ||| ||||||||||||| ||| | |||||| |||||||   ||  |||||||    
T  94195 tttgtctaacatatgcaacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaaaa---actatatattt 94099  T
Q  132 aatataaaatgta 144  Q
    |||| ||||||||    
T  94098 aatacaaaatgta 94086  T

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Target: scaffold0061 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 52956 - 52891
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  52956 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 52891  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 145678 - 145743
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  145678 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 145743  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 13086 - 13151
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 97  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || ||| |||| ||||||||    
T  13086 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaa 13151  T

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Target: scaffold0149 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 22460 - 22504
Alignment:
Q  32 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 76  Q
    |||| |||||||||||||||||| || |||||||| |||||||||    
T  22460 gtttctttaacatgtgcaatattgcacatgttaaatcaactaaaa 22504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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