View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8905A_low_248 (Length: 235)

Name: NF8905A_low_248
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8905A_low_248
NF8905A_low_248
[»] chr8 (8 HSPs)
chr8 (53-217)||(28846502-28846666)
chr8 (60-209)||(27190660-27190809)
chr8 (60-211)||(13152531-13152682)
chr8 (60-217)||(14446714-14446870)
chr8 (60-210)||(24333602-24333752)
chr8 (60-98)||(16532768-16532806)
chr8 (60-135)||(9256355-9256427)
chr8 (174-212)||(9256307-9256345)
[»] chr4 (8 HSPs)
chr4 (60-217)||(31944497-31944654)
chr4 (60-124)||(4325387-4325450)
chr4 (60-98)||(12211363-12211401)
chr4 (163-211)||(24104671-24104719)
chr4 (168-210)||(51379529-51379571)
chr4 (119-181)||(24104597-24104659)
chr4 (60-98)||(53693171-53693209)
chr4 (60-98)||(55464797-55464835)
[»] chr3 (7 HSPs)
chr3 (61-210)||(3857014-3857163)
chr3 (60-210)||(51261867-51262017)
chr3 (60-203)||(15667868-15668011)
chr3 (60-98)||(43137127-43137165)
chr3 (60-98)||(24908530-24908568)
chr3 (60-98)||(31989029-31989067)
chr3 (60-98)||(37382006-37382044)
[»] chr2 (3 HSPs)
chr2 (60-217)||(12539455-12539612)
chr2 (60-217)||(34317604-34317761)
chr2 (60-94)||(35649797-35649831)
[»] chr5 (5 HSPs)
chr5 (63-217)||(8785664-8785817)
chr5 (60-217)||(3055362-3055520)
chr5 (60-211)||(11852602-11852753)
chr5 (71-217)||(27168943-27169089)
chr5 (60-153)||(23244707-23244800)
[»] chr7 (12 HSPs)
chr7 (60-217)||(43727877-43728034)
chr7 (60-217)||(9230282-9230439)
chr7 (60-151)||(23804635-23804726)
chr7 (93-212)||(24276397-24276517)
chr7 (60-147)||(23180022-23180109)
chr7 (96-217)||(5287949-5288070)
chr7 (82-217)||(25024464-25024599)
chr7 (60-114)||(8638598-8638652)
chr7 (60-98)||(45197644-45197682)
chr7 (60-98)||(19399978-19400016)
chr7 (60-98)||(27387443-27387481)
chr7 (60-88)||(18375416-18375444)
[»] chr1 (11 HSPs)
chr1 (60-209)||(48606749-48606898)
chr1 (60-217)||(30559142-30559299)
chr1 (60-217)||(9637003-9637159)
chr1 (60-217)||(14498779-14498935)
chr1 (60-138)||(52753954-52754032)
chr1 (60-113)||(25017371-25017424)
chr1 (63-114)||(32379992-32380043)
chr1 (60-113)||(40864856-40864909)
chr1 (124-193)||(30054770-30054839)
chr1 (60-98)||(17127439-17127477)
chr1 (169-217)||(52754030-52754078)
[»] scaffold0178 (1 HSPs)
scaffold0178 (60-211)||(17627-17778)
[»] chr6 (4 HSPs)
chr6 (60-217)||(12180662-12180819)
chr6 (63-217)||(11970841-11970995)
chr6 (168-210)||(8035493-8035535)
chr6 (96-138)||(8035438-8035480)
[»] scaffold0002 (1 HSPs)
scaffold0002 (60-185)||(435492-435617)
[»] scaffold0007 (1 HSPs)
scaffold0007 (60-98)||(259918-259956)


Alignment Details
Target: chr8 (Bit Score: 157; Significance: 1e-83; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 53 - 217
Target Start/End: Complemental strand, 28846666 - 28846502
Alignment:
Q  53 gatggacatcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagg 152  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28846666 gatgtacatcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagg 28846567  T
Q  153 gtttggaaactggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28846566 gtttggcaactggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 28846502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 60 - 209
Target Start/End: Complemental strand, 27190809 - 27190660
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||| || |||      
T  27190809 atcatcaagtcattgaaccacacatcgttgatcttgtttgtaacaattctttctcgcgggcttataagattattttactagcttgttgacatggcttgac 27190710  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcac 209  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  27190709 aactggtggacttccaacttttgttgatgttggtaatagctttggtgcac 27190660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 60 - 211
Target Start/End: Original strand, 13152531 - 13152682
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| || |||      
T  13152531 atcatcaagtcattgaaccacacagcgttgatcatgttggtaacaattctttctcacgggcttataagattattttactagctttttgacatggcttgat 13152630  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcaccc 211  Q
    |||||||  |||| |||||||||||||||||||| |||||||||||||||||    
T  13152631 aactggtgtacttccaacttttgttgatgttggtaatagctttggtgcaccc 13152682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 14446870 - 14446714
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||      
T  14446870 atcatcaagtcattgaaccacaaatcgttgatcttgt-ggtaacaattctttctcgcagacttataagattattttactagcttattgacaggacttgac 14446772  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
     |||||| ||||| |||||||||||||||||||| |||||||||||| |||| |||||    
T  14446771 tactggtggacttccaacttttgttgatgttggtaatagctttggtgtacccaatatt 14446714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 60 - 210
Target Start/End: Complemental strand, 24333752 - 24333602
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |  |||      
T  24333752 atcataaagtcattgaatcatacatcgttgatcttgttggtaacaattctttctcacgggcttataagattattttactagcttattgacaagacttgac 24333653  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcacc 210  Q
    ||| ||| ||||| |||||||| ||||||||||| |||| |||||||||||    
T  24333652 aaccggtggacttccaacttttattgatgttggtaatagttttggtgcacc 24333602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 16532768 - 16532806
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16532768 atcatcaagtcattgaaccacacatcgttgatcttgttg 16532806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 9256427 - 9256355
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattatttt 135  Q
    |||||||||||||| ||||||||||| |||||| | |||||   ||||||||||||||  ||||||||||||||||    
T  9256427 atcatcaagtcattaaaccacacatcattgatcatattggt---aattctttctcacgtgcttataagattatttt 9256355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 9256345 - 9256307
Alignment:
Q  174 caacttttgttgatgttggttatagctttggtgcacccg 212  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  9256345 caacttttgttgatgttggtaatagctttggtgcacccg 9256307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 4e-53; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 31944654 - 31944497
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||      
T  31944654 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacgagcttataagattattttactagcttattggcagggcttgat 31944555  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    ||||||| ||||| ||||||||||| |||||||| ||||||||  |||||||| ||||    
T  31944554 aactggtggacttccaacttttgttaatgttggtaatagctttcatgcacccgctatt 31944497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 4325450 - 4325387
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttat 124  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||    
T  4325450 atcatcaagtcattgaaccacacatcgttgatcttgttggtaac-attctttcttacgggcttat 4325387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 12211363 - 12211401
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12211363 atcatcaagtcattgaaccacacatcgttgatcttgttg 12211401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 24104671 - 24104719
Alignment:
Q  163 tggtagacttacaacttttgttgatgttggttatagctttggtgcaccc 211  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  24104671 tggtggactttcaacttttgttgatgttggtgatagctttggtgcaccc 24104719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 51379571 - 51379529
Alignment:
Q  168 gacttacaacttttgttgatgttggttatagctttggtgcacc 210  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  51379571 gacttccaacttttgttgatgttggtaatagctttggtgcacc 51379529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 24104597 - 24104659
Alignment:
Q  119 acttataagattattttactagcttattgacagggtttggaaactggtagacttacaactttt 181  Q
    |||||||||||| |||||||||||||||| ||| | |||  ||||||| ||||| ||||||||    
T  24104597 acttataagattcttttactagcttattggcagagcttgataactggtggacttccaactttt 24104659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 53693171 - 53693209
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  53693171 atcatcaagtcattgaaccacacaccgttgatcatgttg 53693209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 55464797 - 55464835
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  55464797 atcatcaagtcattcaaccacacattgttgatcttgttg 55464835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 4e-53; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 61 - 210
Target Start/End: Original strand, 3857014 - 3857163
Alignment:
Q  61 tcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttggaa 160  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||  |    
T  3857014 tcatcaagtcatttaaccacacatcgttgatcttgatggtaacaattatttctcacgggcttataagattattttactagcttattgacagggcttgata 3857113  T
Q  161 actggtagacttacaacttttgttgatgttggttatagctttggtgcacc 210  Q
    |||||| ||||| ||||||||||||||||| || ||||||||||||||||    
T  3857114 actggtggacttccaacttttgttgatgttcgtaatagctttggtgcacc 3857163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 60 - 210
Target Start/End: Complemental strand, 51262017 - 51261867
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    |||||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||  ||||| | ||||||||||||||||||||||||||||||      
T  51262017 atcatcaattcattgtaccacacttcgttgatcttgttggtaacaattctttttcacgagcttattatattattttactagcttattgacagggtttgac 51261918  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcacc 210  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||| ||||||    
T  51261917 aactggtggacttccaacttttgttgatgttggtaatagctttgatgcacc 51261867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 203
Target Start/End: Complemental strand, 15668011 - 15667868
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||||||||| ||||||||| |||| |||      
T  15668011 atcatcaagttattgaaccacacatccttgatcttgttggtaacaattctttctcatgggtttataagattattttacttgcttattgatagggcttgat 15667912  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttg 203  Q
    |||| || ||||| |||||||||||||||||||| |||| ||||    
T  15667911 aactagtggacttccaacttttgttgatgttggtaataggtttg 15667868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 43137165 - 43137127
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  43137165 atcatcaagtcattgaaccatacatcgttgatcttgttg 43137127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 24908530 - 24908568
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  24908530 atcatcaagtcattcaaccacacattgttgatcttgttg 24908568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 31989067 - 31989029
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  31989067 atcatcaagtcattcaaccacacattgttgatcttgttg 31989029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 37382006 - 37382044
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  37382006 atcatcgagtcatttaaccacacatcgttgatcttgttg 37382044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 12539612 - 12539455
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| || || |||      
T  12539612 atcatcaagtcattgaaccacgcattgttgatcttgttggtaacaattctttctcacgggcttataagattcttttactagcttattggcaaggcttgat 12539513  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  12539512 aactggtggacttccaacttttgttgatgttggtaatagctttggtgcacccgctatt 12539455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 60 - 217
Target Start/End: Original strand, 34317604 - 34317761
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||  | |||      
T  34317604 atcatcaagtcattgaaccacacatcattgatcttgttggtaacaattctttctcatggatttataagattcttttactagcttattgacaaagcttgat 34317703  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||||| |||||| ||||    
T  34317704 aactggtggacttccaacttttgttgatgttggtaatagctttggttcacccgctatt 34317761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 94
Target Start/End: Original strand, 35649797 - 35649831
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatctt 94  Q
    |||||||||||||||||| ||||||||||||||||    
T  35649797 atcatcaagtcattgaacaacacatcgttgatctt 35649831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 2e-51; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 63 - 217
Target Start/End: Complemental strand, 8785817 - 8785664
Alignment:
Q  63 atcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttggaaac 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||| || |||||||  |||    
T  8785817 atcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcattg-cttataagattattttactagcttattaacggggtttgataac 8785719  T
Q  163 tggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    | || ||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  8785718 tagtggacttccaacttttgttgatgttggtaatagctttggtgcacccgctatt 8785664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 3055520 - 3055362
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||      
T  3055520 atcatcaagtcattgaaccacacatcgttgatcatgttggtaacaattctttctcacgggcttataagattattttactagcttattgacatggcttgat 3055421  T
Q  160 aactggtagacttacaac-ttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    |||||||  ||||  | |  ||||||||||||| | |||||||||||||||||| ||||    
T  3055420 aactggtttacttctaccaatttgttgatgttgataatagctttggtgcacccgctatt 3055362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 211
Target Start/End: Complemental strand, 11852753 - 11852602
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||      
T  11852753 atcatcaagtcattgaaccacacatctttcatcttgttggtaataattctttctcacggacttataagattattttactagcttattgacaggacttgac 11852654  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcaccc 211  Q
    ||||| | || ||   ||||||||||||||| || |||| ||||||||||||    
T  11852653 aactgatggatttttcacttttgttgatgttagtaatagttttggtgcaccc 11852602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 71 - 217
Target Start/End: Original strand, 27168943 - 27169089
Alignment:
Q  71 attgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttggaaactggtagac 170  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||||||| |  |||  ||||||| |||    
T  27168943 attgaaccacacatcgttgatcttgtttgtaacaattatttctcatgggcttataagattattttactagcttattgacaagacttgataactggtggac 27169042  T
Q  171 ttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    || || ||||||||||||||||| ||||||||||| |||||| ||||    
T  27169043 ttccatcttttgttgatgttggtaatagctttggtacacccgctatt 27169089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 60 - 153
Target Start/End: Original strand, 23244707 - 23244800
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacaggg 153  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  23244707 atcatcaagtcattgaacgacacatcgttgatcttgttggtaacaattctttctcattggcttataagattattttactagcttattgacaggg 23244800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 9e-51; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 43728034 - 43727877
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||||||||||||||||||||||| |  |||      
T  43728034 atcatcaagtcattgaaccacacatcgttgatcatgttggtaacaattctttctcataggcttataagattattttactagcttattgacatgagttgat 43727935  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    |||||||  |||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  43727934 aactggtgtacttccaacttttgttgatgttggtaatagctttggtgcacccgctatt 43727877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 9230439 - 9230282
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||| || |||      
T  9230439 atcatcaagtcattgaaccacacatcgttgaccatgttggtaacaattttttctaacgggcttataagattattttactagcttattgacatggcttgat 9230340  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    ||||| |  | || |||||||||||||||||| | |||||||||||||||||| ||||    
T  9230339 aactgatgtatttccaacttttgttgatgttgataatagctttggtgcacccgctatt 9230282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 60 - 151
Target Start/End: Original strand, 23804635 - 23804726
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacag 151  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||    
T  23804635 atcaacaagtcattgaaccacacatcgttgatcttgttggtaaccattctttctcacaaacttataagattattttactagcttattgacag 23804726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 93 - 212
Target Start/End: Original strand, 24276397 - 24276517
Alignment:
Q  93 ttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga-aactggtagacttacaacttttgttgatgttg 191  Q
    ||||||||||||||||||||| |||   ||||||||||| |||||||||||||||| || || | || ||||||| ||||| ||||||||||||||||||    
T  24276397 ttgttggtaacaattctttctaacgaggttataagattaatttactagcttattgatagagtcttgacaactggtggacttccaacttttgttgatgttg 24276496  T
Q  192 gttatagctttggtgcacccg 212  Q
    |||||||||||||||||||||    
T  24276497 gttatagctttggtgcacccg 24276517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 147
Target Start/End: Original strand, 23180022 - 23180109
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattg 147  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||    
T  23180022 atcatcaagttattgaaacacacatcgttgatcttgttggtaacaattatttctcacgagcttataagattattttactagcttattg 23180109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 5288070 - 5287949
Alignment:
Q  96 ttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttggaaactggtagacttacaacttttgttgatgttggtta 195  Q
    ||||||||| ||||||||||||  ||| ||||||||||||||||||||||||||||| ||||  ||| ||| ||||| ||||||||||||||| |||| |    
T  5288070 ttggtaacacttctttctcacgagcttgtaagattattttactagcttattgacaggatttgacaaccggtggacttccaacttttgttgatgatggtaa 5287971  T
Q  196 tagctttggtgcacccgatatt 217  Q
    |||||||||| |||||| ||||    
T  5287970 tagctttggtacacccgctatt 5287949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 25024599 - 25024464
Alignment:
Q  82 catcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttggaaactggtagacttacaactttt 181  Q
    |||||||||| || || |||||||||| ||||| | | ||||||||||||||||||||||||||| ||| || |||  || |||| ||||| ||||||||    
T  25024599 catcgttgattttattagtaacaattccttctcgccggcttataagattattttactagcttattaacatggattgacaattggtggacttccaactttt 25024500  T
Q  182 gttgatgttggttatagctttggtgcacccgatatt 217  Q
    ||||||| |||| |||||||||||||| ||| ||||    
T  25024499 gttgatgctggtaatagctttggtgcatccgctatt 25024464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 8638652 - 8638598
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctc 114  Q
    |||||||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  8638652 atcatcaagtaattaaaccacacgtcgttgatcttgttggtaacaattctttctc 8638598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 45197682 - 45197644
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  45197682 atcatcaagtcattgaaccacacattgttgatcttgttg 45197644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 19400016 - 19399978
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  19400016 atcatcaagtcattcaaccacacattgttgatcttgttg 19399978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 27387443 - 27387481
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  27387443 atcatcaagtcattcaaccacacattgttgatcttgttg 27387481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 18375444 - 18375416
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgtt 88  Q
    |||||||||||||||||||||||||||||    
T  18375444 atcatcaagtcattgaaccacacatcgtt 18375416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 60 - 209
Target Start/End: Original strand, 48606749 - 48606898
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||||||||||  |||||||||||||||      
T  48606749 atcatcaagtcattgaaccacacatcgttgatcttgttggtagcaattctttcccacgaacatataagattattttactagaatattgacagggtttgat 48606848  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcac 209  Q
    |||| || ||||| |||||||||||||| ||||| |||||||||||||||    
T  48606849 aactagtggacttccaacttttgttgattttggtaatagctttggtgcac 48606898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 60 - 217
Target Start/End: Original strand, 30559142 - 30559299
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||  ||||||||| |||||||||||||||||||||  | |||      
T  30559142 atcatcaagtcatagaaccacacatcgttgatcttgttgataacaattctttctcgcgagcttataagaatattttactagcttattgacaaagcttgac 30559241  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    ||| ||| ||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  30559242 aaccggtggactttcaacttttgttgatgttggtaatagctttggtgcacccgctatt 30559299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 9637159 - 9637003
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||| ||       
T  9637159 atcatcaagtcattgaaccacgcatcattgatcttgttggtaacaattatttctcacgaacttataagatta-tttactagcttattggcagggctttat 9637061  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    ||| ||| ||||| ||||||||||||||||| || || ||||||||||||||| ||||    
T  9637060 aaccggtggactttcaacttttgttgatgttagtaatggctttggtgcacccgctatt 9637003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 14498935 - 14498779
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| || |||      
T  14498935 atcatcaagtcattga-ccacaaatcgttgatcatgttggtaacaaatctttctcacgagcttataagattattttactagcttattgacatggcttgat 14498837  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
     ||||||  |||| |||||||||||||||||| | ||||||||||| |||||| ||||    
T  14498836 gactggtgtacttccaacttttgttgatgttgataatagctttggtacacccgctatt 14498779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 52753954 - 52754032
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttact 138  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| | |||||||||||||||||||    
T  52753954 atcatcaagtcattgaaccacacatcgttgatcatgttggtaataattctttctcacaggcttataagattattttact 52754032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 25017424 - 25017371
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttct 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25017424 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttct 25017371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 32379992 - 32380043
Alignment:
Q  63 atcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32379992 atcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctc 32380043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 40864856 - 40864909
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40864856 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattatttct 40864909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 30054839 - 30054770
Alignment:
Q  124 taagattattttactagcttattgacagggtttggaaactggtagacttacaacttttgttgatgttggt 193  Q
    ||||||||||||||||||||||||  |||| |||  ||| ||| ||||| ||||||||||||||||||||    
T  30054839 taagattattttactagcttattggtagggcttgacaaccggtggacttccaacttttgttgatgttggt 30054770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 17127477 - 17127439
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  17127477 atcatcaagtcattcaaccacacattgttgatcttgttg 17127439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 52754030 - 52754078
Alignment:
Q  169 acttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    |||| ||||||||||| |||||| | |||||||||||||||||| ||||    
T  52754030 actttcaacttttgttaatgttgataatagctttggtgcacccgctatt 52754078  T

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Target: scaffold0178 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 60 - 211
Target Start/End: Complemental strand, 17778 - 17627
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | |  |||||||||||||||||||||||||||||||| | |||      
T  17778 atcatcaagtcattgaaccacacatcgttgatcttgttgataacaattatttctaatgagcttataagattattttactagcttattgacagagattgat 17679  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcaccc 211  Q
    ||||||| ||||| |||||||||||||||||||| |||| ||||||||||||    
T  17678 aactggtggacttccaacttttgttgatgttggtaatagttttggtgcaccc 17627  T

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Target: chr6 (Bit Score: 94; Significance: 5e-46; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 60 - 217
Target Start/End: Original strand, 12180662 - 12180819
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| |||      
T  12180662 atcatcaagtcattgaaccacacaatgttgatcttgttggtaacaattttttctcacgggcttataagattattttaccagcttattgacagggcttgat 12180761  T
Q  160 aactggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    ||||| | ||||| ||||||||||||||||| || ||| |||||| ||||||| ||||    
T  12180762 aactgatggactttcaacttttgttgatgtttgtaataactttggcgcacccgctatt 12180819  T

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Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 63 - 217
Target Start/End: Complemental strand, 11970995 - 11970841
Alignment:
Q  63 atcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttggaaac 162  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| ||||||||||||| |||| ||  |||||||  |||    
T  11970995 atcaagtcattgaaccacacatcgttgatcttattggtaacaattctttctcacatacttataaaattattttactagattatagatggggtttgacaac 11970896  T
Q  163 tggtagacttacaacttttgttgatgttggttatagctttggtgcacccgatatt 217  Q
    | || |||||   ||||||| |||||||||| ||||||||| |||||||| ||||    
T  11970895 tagtggacttcatacttttgctgatgttggtaatagctttgctgcacccgctatt 11970841  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 8035493 - 8035535
Alignment:
Q  168 gacttacaacttttgttgatgttggttatagctttggtgcacc 210  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  8035493 gacttccaacttttgttgatgttggtaatagctttggtgcacc 8035535  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 8035438 - 8035480
Alignment:
Q  96 ttggtaacaattctttctcacggacttataagattattttact 138  Q
    ||||||||||||||||||||||  | |||||||||||||||||    
T  8035438 ttggtaacaattctttctcacgagcatataagattattttact 8035480  T

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Target: scaffold0002 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 435492 - 435617
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttggtaacaattctttctcacggacttataagattattttactagcttattgacagggtttgga 159  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||||| || |||      
T  435492 atcatcaagtcattgagccacacattattgatcttgttggtaacaattttttctcacgagcttataagattattttactaacttattgacatgggttgac 435591  T
Q  160 aactggtagacttacaacttttgttg 185  Q
    ||||||| |||||  |||||||||||    
T  435592 aactggtggacttcgaacttttgttg 435617  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 259956 - 259918
Alignment:
Q  60 atcatcaagtcattgaaccacacatcgttgatcttgttg 98  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  259956 atcatcaagtcattgaaccactcattgttgatcttgttg 259918  T

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