View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8905A_low_267 (Length: 230)
Name: NF8905A_low_267
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8905A_low_267 |
 |  |
|
| [»] scaffold0265 (1 HSPs) |
 |  |  |
|
| [»] scaffold0012 (1 HSPs) |
 |  |  |
|
| [»] scaffold0029 (1 HSPs) |
 |  |  |
|
| [»] scaffold0002 (1 HSPs) |
 |  |  |
|
| [»] scaffold0093 (1 HSPs) |
 |  |  |
|
| [»] scaffold0125 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 1927922 - 1927694
Alignment:
| Q |
1 |
agcaagacaccatctgtttctcagtggtgaccgcaacactgcctatttccatagggtctccaaaattcgagcagcgacaaaatctatttctcttttacag |
100 |
Q |
| |
|
|||||||||||||| |||||| |||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
1927922 |
agcaagacaccatcagtttcttagtggtgatcgcaacactgcctatttccataaggtctccaaaatccgagcagcgacaaaatctatttctcttttacag |
1927823 |
T |
 |
| Q |
101 |
gatggtgacaatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaata |
200 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1927822 |
gatggtgataatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatctttagcatggataacaattgtgctcagaata |
1927723 |
T |
 |
| Q |
201 |
ctttggtggatgaaaccattccttctctg |
229 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1927722 |
ctttggtggatgaaaccattccttctctg |
1927694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0265 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0265
Description:
Target: scaffold0265; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 22832 - 22608
Alignment:
| Q |
5 |
agacaccatctgtttctcagtggtgaccgcaacactgcctatttccatagggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatg |
104 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22832 |
agacaccatcagtttcttagtggtgaccgcaacactgcctatttccataaggtctccaaaatccgagcatcgacaaaatctatttctcttttacaggatg |
22733 |
T |
 |
| Q |
105 |
gtgacaatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatacttt |
204 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22732 |
gtgataatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatctttagcatggataacaattgtgctcagaatacttt |
22633 |
T |
 |
| Q |
205 |
ggtggatgaaaccattccttctctg |
229 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
22632 |
ggtggatgaaaccattccttctctg |
22608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 58966 - 58746
Alignment:
| Q |
5 |
agacaccatctgtttctcagtggtgaccgcaacactgcctatttccatagggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatg |
104 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
58966 |
agacaccatcagtttcttagtggtgaccgcaacactgcctatttccataaggtctccaaaatccgagcagcgacaaaatctatttctcttttacaggatg |
58867 |
T |
 |
| Q |
105 |
gtgacaatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatacttt |
204 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
58866 |
gtgataatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatctttagcatggataacaattgtgctcagaatactat |
58767 |
T |
 |
| Q |
205 |
ggtggatgaaaccattccttc |
225 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
58766 |
ggtggatgaaaccattccttc |
58746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 21809977 - 21810201
Alignment:
| Q |
5 |
agacaccatctgtttctcagtggtgaccgcaacactgcctatttccatagggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatg |
104 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
21809977 |
agacaccatcagtttcttagtggtgaccgcaacactgcctatttccataaggtctccaaaatccgagcaacgacaaaatctatctctcttttacaggatg |
21810076 |
T |
 |
| Q |
105 |
gtgacaatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatacttt |
204 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
21810077 |
gtgataatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatctttagcatggataacaattgtgctcagaatacttt |
21810176 |
T |
 |
| Q |
205 |
ggtggatgaaaccattccttctctg |
229 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
21810177 |
ggtggatgaaaccattccttctctg |
21810201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 41347019 - 41346876
Alignment:
| Q |
80 |
aaatctatttctcttttacaggatggtgacaatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatgg |
179 |
Q |
| |
|
||||| |||||| | || ||||||||||| ||||| || |||||| ||| | |||||| |||||||||||||||||||||| | ||||||||| ||| |
|
|
| T |
41347019 |
aaatcaatttctttcttgcaggatggtgaaaatgttattactgattccatggtaatagagatgcatattctttcttattttcaagctatttttagcgtgg |
41346920 |
T |
 |
| Q |
180 |
ataacaattgtgctcagaatactttggtggatgaaaccattcct |
223 |
Q |
| |
|
|||| || ||||| |||||| ||||| |||||||| |||||| |
|
|
| T |
41346919 |
ataataactgtgcatagaatatgttggttgatgaaacaattcct |
41346876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 127699 - 127922
Alignment:
| Q |
6 |
gacaccatctgtttctcagtggtgaccgcaacactgcctatttccatagggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatgg |
105 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
127699 |
gacaccatcagtttctcaagtgtgaccgcaacactgcctatttccatagggtctccaaaattggagcatcgacaaaatctatttctcttttacaggatgg |
127798 |
T |
 |
| Q |
106 |
tgacaatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatactttg |
205 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
127799 |
tgataatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtactcagaatactttg |
127898 |
T |
 |
| Q |
206 |
gtggatgaaaccattccttctctg |
229 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
127899 |
gtggatgaaaccattccttctctg |
127922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 305516 - 305739
Alignment:
| Q |
6 |
gacaccatctgtttctcagtggtgaccgcaacactgcctatttccatagggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatgg |
105 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
305516 |
gacaccatcagtttctcaagtgtgaccgcaacactgcctatttccatagggtctccaaaattggagcatcgacaaaatctatttctcttttacaggatgg |
305615 |
T |
 |
| Q |
106 |
tgacaatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatactttg |
205 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
305616 |
tgataatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtactcagaatactttg |
305715 |
T |
 |
| Q |
206 |
gtggatgaaaccattccttctctg |
229 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
305716 |
gtggatgaaaccattccttctctg |
305739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 21881109 - 21880889
Alignment:
| Q |
5 |
agacaccatctgtttctcagtggtgaccgcaacactgcctatttccatagggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatg |
104 |
Q |
| |
|
|||||||||| |||||| |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21881109 |
agacaccatcagtttcttagtggtgatctcaacactgcctatttccataaggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatg |
21881010 |
T |
 |
| Q |
105 |
gtgacaatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatacttt |
204 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | |
|
|
| T |
21881009 |
gtgataatgtcataactgatcccactgctatagagttgcatattctttcttattttcaggaaatctttagcatggataacaattgtgctcataatactat |
21880910 |
T |
 |
| Q |
205 |
ggtggatgaaaccattccttc |
225 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
21880909 |
ggtggatgaaaccattccttc |
21880889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0093 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0093
Description:
Target: scaffold0093; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 12851 - 13064
Alignment:
| Q |
16 |
gtttctcagtggtgaccgcaacactgcctatttccatagggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatggtgacaatgtc |
115 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| |||||||||||||||| ||||||||| ||||| |
|
|
| T |
12851 |
gtttcttagtggtgaccgcaacactgcctattttcatagggtctctcaaatccgagcagcgacaaagtctatttctcttttactggatggtgataatgtt |
12950 |
T |
 |
| Q |
116 |
ataactgatcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatactttggtggatgaaa |
215 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| |||||| |||||||||||| |
|
|
| T |
12951 |
atcactgatcccactgctatagagttgcatattctttcttattttcaggaaatttttaacatggacaacaactgtgctcaaaatactatggtggatgaaa |
13050 |
T |
 |
| Q |
216 |
ccattccttctctg |
229 |
Q |
| |
|
||||||||||||| |
|
|
| T |
13051 |
acattccttctctg |
13064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 20383487 - 20383661
Alignment:
| Q |
25 |
tggtgaccgcaacactgcctatttccatagggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatggtgacaatgtcataactgat |
124 |
Q |
| |
|
|||||| || |||||| | |||||||| | || || ||||||| |||| ||||||| |||||||| ||||||||||||| || ||||| || |||||| |
|
|
| T |
20383487 |
tggtgatcgtaacactacttatttccaccgagtatctaaaattcaggcagtgacaaaaactatttcttttttacaggatggggataatgttattactgat |
20383586 |
T |
 |
| Q |
125 |
cccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaat |
199 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
20383587 |
cccactgcaatagaattgcatattctttcttattttcaggcaatttttagcatggacaacaactgtgctcagaat |
20383661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 226
Target Start/End: Complemental strand, 33237263 - 33237090
Alignment:
| Q |
53 |
agggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatggtgacaatgtcataactgatcccactgctatagagttgcatattcttt |
152 |
Q |
| |
|
||||| || ||||| || ||||| || ||||| |||||| | || ||||||||||||||||| || |||||||||| | ||||||| | ||||||| | |
|
|
| T |
33237263 |
agggtatctaaaatccgggcagcaaccaaatcgatttctttcttgcaggatggtgacaatgttatctctgatcccacagatatagagacgaatattctct |
33237164 |
T |
 |
| Q |
153 |
cttattttcaggaaatttttagcatggataacaattgtgctcagaatactttggtggatgaaaccattccttct |
226 |
Q |
| |
|
|||||||||||| | | |||||||||||||||||||||| |||||||||| |||| |||||||| ||||||||| |
|
|
| T |
33237163 |
cttattttcaggcactctttagcatggataacaattgtgttcagaatactctggtagatgaaacaattccttct |
33237090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 228
Target Start/End: Original strand, 32297351 - 32297558
Alignment:
| Q |
21 |
tcagtggtgaccgcaacactgcctatttccatagggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatggtgacaatgtcataac |
120 |
Q |
| |
|
||||||| ||||| |||||||| ||||| ||||| | || ||||| || ||||| ||||||||||||||| ||| | ||||||| |||||| | || || |
|
|
| T |
32297351 |
tcagtggagaccgtaacactgcttattttcatagaatttctaaaatccgggcagcaacaaaatctatttctttttaagaggatggagacaatattattac |
32297450 |
T |
 |
| Q |
121 |
tgatcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatactttggtggatgaaaccatt |
220 |
Q |
| |
|
| | | ||| ||||| | ||||||||||| ||||||||||||| ||| || |||||||| || |||||| | || ||||||||||| |||||||| ||| |
|
|
| T |
32297451 |
taaacacacaactatataattgcatattctctcttattttcaggcaatattcagcatggaaaataattgtacacaaaatactttggttgatgaaacaatt |
32297550 |
T |
 |
| Q |
221 |
ccttctct |
228 |
Q |
| |
|
|| ||||| |
|
|
| T |
32297551 |
ccctctct |
32297558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 213
Target Start/End: Complemental strand, 25974245 - 25974055
Alignment:
| Q |
23 |
agtggtgaccgcaacactgcctatttccatagggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatggtgacaatgtcataactg |
122 |
Q |
| |
|
||||| ||||| |||||||| || || || ||||| || ||||| || ||||| || || ||||||||| | | ||||||||||| ||||| | |||| |
|
|
| T |
25974245 |
agtggggaccgtaacactgcttactttcacagggtgtctaaaatccgggcagccaccaactctatttctttactgcaggatggtgaaaatgttcttactg |
25974146 |
T |
 |
| Q |
123 |
atcccactgctatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatactttggtggatga |
213 |
Q |
| |
|
|||||| | ||| ||| |||||||||||||||||||||| | ||||||| ||||||||| || |||| ||| ||||| ||||||||||| |
|
|
| T |
25974145 |
atcccatggatattgagatgcatattctttcttattttcaaggtatttttaccatggataataactgtgttcaaaatacgttggtggatga |
25974055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 213
Target Start/End: Complemental strand, 20940034 - 20939856
Alignment:
| Q |
35 |
aacactgcctatttccatagggtctccaaaattcgagcagcgacaaaatctatttctcttttacaggatggtgacaatgtcataactgatcccactgcta |
134 |
Q |
| |
|
|||||||| || || || ||||| || ||||| || ||||| || || ||||||||| | | ||||||||||||||||| | |||||||||| | || |
|
|
| T |
20940034 |
aacactgcttactttcacagggtgtctaaaatccgggcagccaccaactctatttctttactgcaggatggtgacaatgttcttactgatcccatggata |
20939935 |
T |
 |
| Q |
135 |
tagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatactttggtggatga |
213 |
Q |
| |
|
| ||| |||||||||||||||||||||| | ||||||| ||||||||| || |||| ||| ||||| ||||||||||| |
|
|
| T |
20939934 |
ttgagatgcatattctttcttattttcaaggtatttttaccatggataataactgtgttcaaaatacattggtggatga |
20939856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0125 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0125
Description:
Target: scaffold0125; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 38187 - 38098
Alignment:
| Q |
133 |
tatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatactttggtggatgaaaccattcc |
222 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||| ||||| ||||||||||| || |||| ||| |||||||| |||||||| |||||||| |
|
|
| T |
38187 |
tatagagttgcatattctatcttactttcagggtattttcagcatggataataactgtggtcaaaatactttagtggatgagaccattcc |
38098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0125; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 26644 - 26563
Alignment:
| Q |
141 |
tgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatactttggtggatgaaaccattcc |
222 |
Q |
| |
|
|||||||||| ||||| ||||||| ||||| ||||||||||| ||||||| ||||||||| || |||||||| |||||||| |
|
|
| T |
26644 |
tgcatattctatcttactttcagggtattttcagcatggataataattgtggtcagaatacattagtggatgagaccattcc |
26563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 14677328 - 14677239
Alignment:
| Q |
133 |
tatagagttgcatattctttcttattttcaggaaatttttagcatggataacaattgtgctcagaatactttggtggatgaaaccattcc |
222 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||| ||||| ||||||||||| || |||| |||||||||||| |||||||| | |||||| |
|
|
| T |
14677328 |
tatagagttgcatattctatcttactttcagggtattttcagcatggataataactgtggtcagaatactttagtggatgagatcattcc |
14677239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University