View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8905A_low_270 (Length: 229)
Name: NF8905A_low_270
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8905A_low_270 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 9340171 - 9340399
Alignment:
| Q |
1 |
tttatttgttatgtgtacatcatttctactttatgcttaattatttgttcatttgtagggaccacaatgtcaaaattggctggaagcaacaacggcaacc |
100 |
Q |
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| T |
9340171 |
tttatttgttatgtgtacatcatttctactttatgcttaattatttgttcatttgtagggaccacaatgtcaaaattggctggaagcaacaacggcaacc |
9340270 |
T |
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| Q |
101 |
ctttgatgaggcctgtggatcccaatgctgcatattcccatcatacaggaaaacctgttgcaaatgaagctattgggagtgacactcataatagtgaggc |
200 |
Q |
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| T |
9340271 |
ctttgatgaggcctgtggaagccaatgctgcatattcccatcatacaggaaaacctgttgcaaatgaagctattgggagtgacactcataatagtgaggc |
9340370 |
T |
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| Q |
201 |
agataagttacatccctttggtttattga |
229 |
Q |
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| T |
9340371 |
agataagttacatccctttggtttattga |
9340399 |
T |
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