View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8905A_low_287 (Length: 225)

Name: NF8905A_low_287
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8905A_low_287
NF8905A_low_287
[»] chr6 (15 HSPs)
chr6 (17-208)||(27630038-27630229)
chr6 (17-200)||(27272912-27273095)
chr6 (103-208)||(4546199-4546304)
chr6 (103-208)||(28207118-28207223)
chr6 (49-197)||(4524976-4525124)
chr6 (103-208)||(4724558-4724663)
chr6 (124-197)||(4757448-4757521)
chr6 (124-197)||(30558452-30558525)
chr6 (124-197)||(26778063-26778136)
chr6 (124-197)||(27360446-27360519)
chr6 (124-197)||(27450789-27450862)
chr6 (32-78)||(20160510-20160556)
chr6 (32-78)||(22172275-22172321)
chr6 (124-197)||(29572700-29572773)
chr6 (70-158)||(17024988-17025076)
[»] chr5 (15 HSPs)
chr5 (124-208)||(37359045-37359129)
chr5 (49-194)||(15759172-15759317)
chr5 (121-197)||(32599856-32599932)
chr5 (49-197)||(37771314-37771462)
chr5 (31-197)||(8665772-8665938)
chr5 (124-206)||(37754658-37754740)
chr5 (124-197)||(24681136-24681209)
chr5 (124-197)||(24723663-24723736)
chr5 (124-197)||(28960188-28960261)
chr5 (124-197)||(31826809-31826882)
chr5 (124-197)||(33516055-33516128)
chr5 (124-197)||(37671882-37671955)
chr5 (124-197)||(12131854-12131927)
chr5 (70-197)||(18375748-18375875)
chr5 (70-197)||(30151717-30151844)
[»] scaffold0038 (1 HSPs)
scaffold0038 (103-208)||(7616-7721)
[»] chr7 (14 HSPs)
chr7 (49-194)||(45387037-45387182)
chr7 (124-197)||(3444985-3445058)
chr7 (124-197)||(26486123-26486196)
chr7 (49-197)||(4145427-4145575)
chr7 (124-197)||(16736839-16736912)
chr7 (124-197)||(16751893-16751966)
chr7 (124-197)||(17523223-17523296)
chr7 (124-197)||(17529919-17529992)
chr7 (124-197)||(26275473-26275546)
chr7 (124-197)||(31564778-31564851)
chr7 (124-197)||(5147719-5147792)
chr7 (124-197)||(26320248-26320321)
chr7 (124-197)||(26434948-26435021)
chr7 (19-155)||(16041059-16041195)
[»] chr1 (1 HSPs)
chr1 (124-197)||(51637907-51637980)
[»] chr4 (6 HSPs)
chr4 (49-197)||(31126936-31127084)
chr4 (124-197)||(30753447-30753520)
chr4 (124-197)||(54833095-54833168)
chr4 (127-197)||(21969406-21969476)
chr4 (124-197)||(5005575-5005648)
chr4 (70-197)||(27163756-27163883)
[»] chr3 (17 HSPs)
chr3 (124-208)||(6543008-6543092)
chr3 (124-197)||(4347218-4347291)
chr3 (31-197)||(22871315-22871481)
chr3 (31-197)||(22886374-22886540)
chr3 (124-194)||(28116491-28116561)
chr3 (124-197)||(4416567-4416640)
chr3 (124-197)||(5609856-5609929)
chr3 (124-197)||(8211392-8211465)
chr3 (124-197)||(31965007-31965080)
chr3 (124-197)||(50134605-50134678)
chr3 (49-197)||(18224842-18224990)
chr3 (121-197)||(28020929-28021005)
chr3 (70-197)||(5013363-5013490)
chr3 (124-194)||(7996216-7996286)
chr3 (124-194)||(10642724-10642794)
chr3 (124-194)||(28338956-28339026)
chr3 (124-197)||(5466636-5466709)
[»] chr2 (13 HSPs)
chr2 (31-197)||(21677571-21677737)
chr2 (124-197)||(12717087-12717160)
chr2 (124-197)||(16829820-16829893)
chr2 (124-197)||(16891588-16891661)
chr2 (124-197)||(39889748-39889821)
chr2 (124-210)||(22926510-22926596)
chr2 (127-197)||(32049484-32049554)
chr2 (124-197)||(11635671-11635744)
chr2 (124-197)||(11641860-11641933)
chr2 (124-197)||(31875967-31876040)
chr2 (124-197)||(34861366-34861439)
chr2 (124-197)||(37686391-37686464)
chr2 (124-197)||(37701656-37701729)
[»] chr8 (4 HSPs)
chr8 (103-208)||(12093164-12093269)
chr8 (124-197)||(19286155-19286228)
chr8 (124-197)||(31354214-31354287)
chr8 (124-197)||(19208812-19208885)
[»] scaffold0350 (1 HSPs)
scaffold0350 (124-197)||(7732-7805)
[»] scaffold0237 (1 HSPs)
scaffold0237 (70-197)||(15369-15496)
[»] scaffold0336 (1 HSPs)
scaffold0336 (49-158)||(7961-8070)


Alignment Details
Target: chr6 (Bit Score: 168; Significance: 3e-90; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 17 - 208
Target Start/End: Original strand, 27630038 - 27630229
Alignment:
Q  17 aatatggtgcataggggtatggtggaggtagctgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctc 116  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  27630038 aatatggtgtacaggggtatggtggaggtagctgagcaacattaacaggggcgacagtagccgtagactgacctgctcccgaggataccattccaacctc 27630137  T
Q  117 tgtctccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgataccctctctga 208  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27630138 tgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgataccctctctga 27630229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 27272912 - 27273095
Alignment:
Q  17 aatatggtgcataggggtatggtggaggtagctgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctc 116  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||    
T  27272912 aatacggtacataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagctgtagtctgacctgctccagaggataccattccaacctc 27273011  T
Q  117 tgtctccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgatacc 200  Q
    ||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  27273012 tgtttccttcttcttgtggtggccattgccatacctcttcaacccatttgtagaagactcacccttctcaaatacaatgatacc 27273095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 4546199 - 4546304
Alignment:
Q  103 accattccaacctctgtctccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgataccct 202  Q
    |||||||| || || || || |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| |||||||| || |    
T  4546199 accattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgatcccat 4546298  T
Q  203 ctctga 208  Q
    ||||||    
T  4546299 ctctga 4546304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 28207223 - 28207118
Alignment:
Q  103 accattccaacctctgtctccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgataccct 202  Q
    |||||||| || || || || |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| |||||||| || |    
T  28207223 accattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgatcccat 28207124  T
Q  203 ctctga 208  Q
    ||||||    
T  28207123 ctctga 28207118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 197
Target Start/End: Complemental strand, 4525124 - 4524976
Alignment:
Q  49 tgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccat 148  Q
    ||||| ||||| | ||| || ||||||||| |||| ||||| |||| ||  || ||||| || || || || || |||||||||||||| ||||| ||||    
T  4525124 tgagctgcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccat 4525025  T
Q  149 acctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    ||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  4525024 acctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 4524976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 4724558 - 4724663
Alignment:
Q  103 accattccaacctctgtctccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgataccct 202  Q
    |||||||| || || || || |||||||||||||| ||||| |||||||| |||||  |||| |||||||| ||| | |||||||| |||||||| || |    
T  4724558 accattcccacttccgtttctttcttcttgtggtgtccattaccataccttttcgatgcactcgtagaagattcagctttctcaaacacaatgatcccat 4724657  T
Q  203 ctctga 208  Q
    ||||||    
T  4724658 ctctga 4724663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 4757521 - 4757448
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  4757521 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 4757448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 30558452 - 30558525
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  30558452 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 30558525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 26778063 - 26778136
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | |||||||| ||||||||    
T  26778063 ttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagctttctcaaacacaatgat 26778136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 27360446 - 27360519
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||| ||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  27360446 ttcttcttgtggtgtccattaccatatctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 27360519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 27450789 - 27450862
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||| ||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  27450789 ttcttcttgtggtgtccattaccatatctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 27450862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 20160556 - 20160510
Alignment:
Q  32 ggtatggtggaggtagctgagcagcattaacaggggcgacagtagcc 78  Q
    |||||||||||||||  |||| ||||||||||||||| |||||||||    
T  20160556 ggtatggtggaggtaattgagtagcattaacaggggcaacagtagcc 20160510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 22172275 - 22172321
Alignment:
Q  32 ggtatggtggaggtagctgagcagcattaacaggggcgacagtagcc 78  Q
    |||||||||||||||  |||| ||||||||||||||| |||||||||    
T  22172275 ggtatggtggaggtaattgagtagcattaacaggggcaacagtagcc 22172321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 29572773 - 29572700
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | |||||||| ||||||||    
T  29572773 ttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagctttctcaaacacaatgat 29572700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 17025076 - 17024988
Alignment:
Q  70 acagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccatacctcttcga 158  Q
    ||||||||| |||  ||||| |||| ||  || |||||||| || || || || |||||||||||||| ||||| ||||||||||||||    
T  17025076 acagtagccatagcttgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 17024988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 8e-17; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 37359045 - 37359129
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgataccctctctga 208  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||||||||||||||||| || |||||||    
T  37359045 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaatacaatgatcccatctctga 37359129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 194
Target Start/End: Original strand, 15759172 - 15759317
Alignment:
Q  49 tgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccat 148  Q
    ||||| ||||| | ||| || ||||||||| | || |||||||||| ||  || ||||| || || || || || |||||||||||||| ||||| ||||    
T  15759172 tgagctgcattgataggagcaacagtagccattgattgacctgctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccat 15759271  T
Q  149 acctcttcgacccacttgtagaagactcacccttctcaaatacaat 194  Q
    ||||||||||| |||||| |||||| ||| | |||||||| |||||    
T  15759272 acctcttcgacgcacttgcagaagattcagctttctcaaacacaat 15759317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 32599856 - 32599932
Alignment:
Q  121 tccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    ||||||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  32599856 tccttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 32599932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 197
Target Start/End: Original strand, 37771314 - 37771462
Alignment:
Q  49 tgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccat 148  Q
    ||||| ||||| | ||| || ||||||||| | || ||||| |||| ||  |||||||| || || || || || |||||||||||||| ||||| ||||    
T  37771314 tgagctgcattgataggtgcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccat 37771413  T
Q  149 acctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    ||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  37771414 acctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 37771462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 197
Target Start/End: Original strand, 8665772 - 8665938
Alignment:
Q  31 gggtatggtggaggtagctgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttct 130  Q
    |||||||| ||||| |  ||||| ||||| | ||| || ||||||||| | || ||||| |||| ||  |||||||| || || || || || |||||||    
T  8665772 gggtatggcggaggcatttgagctgcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttct 8665871  T
Q  131 tgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    ||||||| ||||| ||||||||||||||  | || |||||||| ||| | |||||||| ||||||||    
T  8665872 tgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagctttctcaaacacaatgat 8665938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 206
Target Start/End: Complemental strand, 37754740 - 37754658
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgataccctctct 206  Q
    |||||||||||||| ||||| ||||| ||||||||| |||||| |||||| ||| | |||||||| |||||||| || |||||    
T  37754740 ttcttcttgtggtgtccattaccatatctcttcgacgcacttgcagaagattcagctttctcaaacacaatgatcccatctct 37754658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 24681209 - 24681136
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  24681209 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 24681136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 24723736 - 24723663
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  24723736 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 24723663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 28960188 - 28960261
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  28960188 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 28960261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 31826809 - 31826882
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  31826809 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 31826882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 33516128 - 33516055
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  33516128 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 33516055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 37671882 - 37671955
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  37671882 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 37671955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 12131927 - 12131854
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| || |||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  12131927 ttcttcttgtggtgtccattaccgtacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 12131854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 18375748 - 18375875
Alignment:
Q  70 acagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 169  Q
    ||||||||| | || ||||| |||| ||  |||||||| || || || || || |||||||||||||| ||||| || ||||| |||||  |||| ||||    
T  18375748 acagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtag 18375847  T
Q  170 aagactcacccttctcaaatacaatgat 197  Q
    |||| ||| | |||||||| ||||||||    
T  18375848 aagattcagctttctcaaacacaatgat 18375875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 197
Target Start/End: Complemental strand, 30151844 - 30151717
Alignment:
Q  70 acagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 169  Q
    ||||||||| | || ||||| |||| ||  |||||||| || || || || || |||||||||||||| ||||| || ||||| |||||  |||| ||||    
T  30151844 acagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtag 30151745  T
Q  170 aagactcacccttctcaaatacaatgat 197  Q
    |||| ||| | |||||||| ||||||||    
T  30151744 aagattcagctttctcaaacacaatgat 30151717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 7721 - 7616
Alignment:
Q  103 accattccaacctctgtctccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgataccct 202  Q
    |||||||| || || || || |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| |||||||| || |    
T  7721 accattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgatcccat 7622  T
Q  203 ctctga 208  Q
    ||||||    
T  7621 ctctga 7616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 194
Target Start/End: Complemental strand, 45387182 - 45387037
Alignment:
Q  49 tgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccat 148  Q
    ||||| ||||| | ||| || ||||||||| | || ||||| |||| ||  |||||||| || || || || || |||||||||||||| ||||| ||||    
T  45387182 tgagctgcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccat 45387083  T
Q  149 acctcttcgacccacttgtagaagactcacccttctcaaatacaat 194  Q
    ||||||||||| |||||| |||||| ||| | |||||||| |||||    
T  45387082 acctcttcgacgcacttgcagaagattcagctttctcaaacacaat 45387037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 3445058 - 3444985
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  3445058 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 3444985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 26486123 - 26486196
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  26486123 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 26486196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 197
Target Start/End: Original strand, 4145427 - 4145575
Alignment:
Q  49 tgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccat 148  Q
    ||||| ||||| | ||| || ||||||||| | || ||||| |||| ||  |||||||| || || || || || |||||||||||||| ||||| ||||    
T  4145427 tgagctgcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccat 4145526  T
Q  149 acctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    ||||||||||  | || |||||||| ||| | |||||||| ||||||||    
T  4145527 acctcttcgatgcgctcgtagaagattcagctttctcaaacacaatgat 4145575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 16736839 - 16736912
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||| ||||||||| |||| | |||||| ||| | |||||||| ||||||||    
T  16736839 ttcttcttgtggtgtccattaccatatctcttcgacgcactcgcagaagattcagctttctcaaacacaatgat 16736912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 16751893 - 16751966
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||| ||||||||| |||| | |||||| ||| | |||||||| ||||||||    
T  16751893 ttcttcttgtggtgtccattaccatatctcttcgacgcactcgcagaagattcagctttctcaaacacaatgat 16751966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 17523296 - 17523223
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||| ||||||||| |||| | |||||| ||| | |||||||| ||||||||    
T  17523296 ttcttcttgtggtgtccattaccatatctcttcgacgcactcgcagaagattcagctttctcaaacacaatgat 17523223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 17529919 - 17529992
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||| ||||||||| |||| | |||||| ||| | |||||||| ||||||||    
T  17529919 ttcttcttgtggtgtccattaccatatctcttcgacgcactcgcagaagattcagctttctcaaacacaatgat 17529992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 26275473 - 26275546
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| || |||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  26275473 ttcttcttgtggtgtccattaccgtacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 26275546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 31564778 - 31564851
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||| ||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  31564778 ttcttcttgtggtgtccattaccatatctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 31564851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 5147719 - 5147792
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  || | | |||||| ||| | |||||||| ||||||||    
T  5147719 ttcttcttgtggtgtccattaccatacctcttcgatgcattcgcagaagattcagctttctcaaacacaatgat 5147792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 26320248 - 26320321
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| || |||||||||||   ||| |||||||| ||| | |||||||| ||||||||    
T  26320248 ttcttcttgtggtgtccattaccgtacctcttcgatgtactcgtagaagattcagctttctcaaacacaatgat 26320321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 26435021 - 26434948
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||| |||||||   |||| |||||||| ||| | |||||||| ||||||||    
T  26435021 ttcttcttgtggtgtccattaccatatctcttcggtgcactcgtagaagattcagctttctcaaacacaatgat 26434948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 16041195 - 16041059
Alignment:
Q  19 tatggtgcataggggtatggtggaggtagctgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctg 118  Q
    ||||| ||||| ||||| |  ||||||| ||| |||||||||| |||||| ||||||||| | || ||||| ||||  |  |||||||| || || ||||    
T  16041195 tatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctg 16041096  T
Q  119 tctccttcttcttgtggtggccattgccatacctctt 155  Q
    | || |||||||| || || || || |||||||||||    
T  16041095 tttctttcttcttatgatgaccgttaccatacctctt 16041059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 51637980 - 51637907
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||| |||||| |||||| ||| | |||||||| ||||||||    
T  51637980 ttcttcttgtggtgtccattaccatacctcttcgacgcacttgcagaagattcagctttctcaaacacaatgat 51637907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 197
Target Start/End: Original strand, 31126936 - 31127084
Alignment:
Q  49 tgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccat 148  Q
    ||||| ||||| | ||| || ||||||||| | || ||||| |||| ||  |||||||| || || || || || |||||||||||||| ||||| ||||    
T  31126936 tgagctgcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccat 31127035  T
Q  149 acctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    ||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  31127036 acctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 31127084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 30753520 - 30753447
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  30753520 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 30753447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 54833168 - 54833095
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||| |||| | |||||| ||| | |||||||| ||||||||    
T  54833168 ttcttcttgtggtgtccattaccatacctcttcgacgcactcgcagaagattcagctttctcaaacacaatgat 54833095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 21969476 - 21969406
Alignment:
Q  127 ttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    ||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  21969476 ttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 21969406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 5005648 - 5005575
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| |||||||||||||||  ||| | |||||| ||| | |||||||| ||||||||    
T  5005648 ttcttcttgtggtgtccattaccatacctcttcgacgtactcgcagaagattcagctttctcaaacacaatgat 5005575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 27163756 - 27163883
Alignment:
Q  70 acagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 169  Q
    ||||||||| | || ||||| |||| ||  |||||||| || || || || || |||||||||||||| ||||| || ||||| |||||  |||| ||||    
T  27163756 acagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtag 27163855  T
Q  170 aagactcacccttctcaaatacaatgat 197  Q
    |||| ||| | |||||||| ||||||||    
T  27163856 aagattcagctttctcaaacacaatgat 27163883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 6543008 - 6543092
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgataccctctctga 208  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| |||||||| || |||||||    
T  6543008 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctga 6543092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 4347218 - 4347291
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  4347218 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 4347291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 197
Target Start/End: Original strand, 22871315 - 22871481
Alignment:
Q  31 gggtatggtggaggtagctgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttct 130  Q
    |||||||  ||||| | |||||| ||||| | ||| || ||||||||| |||| ||||| |||| ||  || ||||| || || || || || |||||||    
T  22871315 gggtatgacggaggcatctgagctgcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttct 22871414  T
Q  131 tgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    ||||||| ||||| ||||||||||||||  |||| | ||| || ||| | |||||||| ||||||||    
T  22871415 tgtggtgtccattaccatacctcttcgatgcactcgcagaggattcagctttctcaaacacaatgat 22871481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 197
Target Start/End: Original strand, 22886374 - 22886540
Alignment:
Q  31 gggtatggtggaggtagctgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttct 130  Q
    |||||||  ||||| | |||||| ||||| | ||| || ||||||||| |||| ||||| |||| ||  || ||||| || || || || || |||||||    
T  22886374 gggtatgacggaggcatctgagctgcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttct 22886473  T
Q  131 tgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    ||||||| ||||| ||||||||||||||  |||| | ||| || ||| | |||||||| ||||||||    
T  22886474 tgtggtgtccattaccatacctcttcgatgcactcgcagaggattcagctttctcaaacacaatgat 22886540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 28116491 - 28116561
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaat 194  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| |||||    
T  28116491 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaat 28116561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 4416640 - 4416567
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | |||||||| ||||||||    
T  4416640 ttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagctttctcaaacacaatgat 4416567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 5609856 - 5609929
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||| ||||| ||| |||| |||||||| ||| | |||||||| ||||||||    
T  5609856 ttcttcttgtggtgtccattaccatatctctttgacgcactcgtagaagattcagctttctcaaacacaatgat 5609929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 8211465 - 8211392
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| | ||| |||||| | |||||||| ||||||||    
T  8211465 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgcagaggactcagctttctcaaacacaatgat 8211392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 31965007 - 31965080
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | |||||||| ||||||||    
T  31965007 ttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagctttctcaaacacaatgat 31965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 50134605 - 50134678
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | |||||||| ||||||||    
T  50134605 ttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagctttctcaaacacaatgat 50134678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 197
Target Start/End: Complemental strand, 18224990 - 18224842
Alignment:
Q  49 tgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccat 148  Q
    ||||| ||||| | ||| || ||||||||| | || ||||| |||| ||  |||||||| || || || || || |||||||||||||| ||||| || |    
T  18224990 tgagctgcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgt 18224891  T
Q  149 acctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||| |||||  |||| |||||||| ||| | |||||||| ||||||||    
T  18224890 accttttcgatgcactcgtagaagattcagctttctcaaacacaatgat 18224842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 28021005 - 28020929
Alignment:
Q  121 tccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    ||||||||||||||||| || || ||||||||||| ||  |||| |||||||| ||| | |||||||| ||||||||    
T  28021005 tccttcttcttgtggtgtccgttaccatacctctttgatgcactcgtagaagattcagctttctcaaacacaatgat 28020929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 197
Target Start/End: Complemental strand, 5013490 - 5013363
Alignment:
Q  70 acagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 169  Q
    ||||||||| | || ||||| |||| ||  |||||||| || || || || || |||||||||||||| ||||| || ||||| |||||  |||| ||||    
T  5013490 acagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtag 5013391  T
Q  170 aagactcacccttctcaaatacaatgat 197  Q
    |||| ||| | |||||||| ||||||||    
T  5013390 aagattcagctttctcaaacacaatgat 5013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 7996286 - 7996216
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaat 194  Q
    |||||||||||||| ||||| ||||||||||||||  |||| | |||||| ||| | |||||||| |||||    
T  7996286 ttcttcttgtggtgtccattaccatacctcttcgaggcactcgcagaagattcagctttctcaaacacaat 7996216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 10642794 - 10642724
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaat 194  Q
    |||||||||||||| ||||| ||||||||||||||  |||| | |||||| ||| | |||||||| |||||    
T  10642794 ttcttcttgtggtgtccattaccatacctcttcgaggcactcgcagaagattcagctttctcaaacacaat 10642724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 28339026 - 28338956
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaat 194  Q
    |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | |||||||| |||||    
T  28339026 ttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagctttctcaaacacaat 28338956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 5466709 - 5466636
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||| ||  | || |||||||| ||| | |||||||| ||||||||    
T  5466709 ttcttcttgtggtgtccattaccatacctctttgatgcgctcgtagaagattcagctttctcaaacacaatgat 5466636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 197
Target Start/End: Original strand, 21677571 - 21677737
Alignment:
Q  31 gggtatggtggaggtagctgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttct 130  Q
    |||||||| ||||| |  ||||| ||||| | ||| || ||||||||| | || ||||| |||| ||  |||||||| || || || || || |||||||    
T  21677571 gggtatggcggaggcatttgagctgcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttct 21677670  T
Q  131 tgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    ||||||| ||||| ||||||||||||||  | || |||||||| ||| | |||||||| ||||||||    
T  21677671 tgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagctttctcaaacacaatgat 21677737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 12717087 - 12717160
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  12717087 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 12717160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 16829820 - 16829893
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  16829820 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 16829893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 16891661 - 16891588
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  16891661 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 16891588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 39889821 - 39889748
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  39889821 ttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 39889748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 22926510 - 22926596
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgataccctctctgatg 210  Q
    |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | |||||||| |||||||| || || ||||||    
T  22926510 ttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagctttctcaaacacaatgattccatccctgatg 22926596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 32049554 - 32049484
Alignment:
Q  127 ttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    ||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  32049554 ttcttgtggtgtccattaccatacctcttcgaggcactcgtagaagattcagctttctcaaacacaatgat 32049484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 11635671 - 11635744
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| |||||||||||| || |||| | |||||| ||| | |||||||| ||||||||    
T  11635671 ttcttcttgtggtgtccattaccatacctcttcaacgcactcgcagaagattcagctttctcaaacacaatgat 11635744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 11641860 - 11641933
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| |||||||||||| || |||| | |||||| ||| | |||||||| ||||||||    
T  11641860 ttcttcttgtggtgtccattaccatacctcttcaacgcactcgcagaagattcagctttctcaaacacaatgat 11641933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 31876040 - 31875967
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | |||||||| ||||||||    
T  31876040 ttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagctttctcaaacacaatgat 31875967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 34861439 - 34861366
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | |||||||| ||||||||    
T  34861439 ttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagctttctcaaacacaatgat 34861366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 37686391 - 37686464
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | |||||||| ||||||||    
T  37686391 ttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagctttctcaaacacaatgat 37686464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 37701656 - 37701729
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | |||||||| ||||||||    
T  37701656 ttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagctttctcaaacacaatgat 37701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 12093164 - 12093269
Alignment:
Q  103 accattccaacctctgtctccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgataccct 202  Q
    |||||||| || || || || |||||||||||||| ||||| ||||| ||||||||  |||| |||||||| ||| | |||||||| |||||||| || |    
T  12093164 accattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatgcactcgtagaagattcagctttctcaaacacaatgatcccat 12093263  T
Q  203 ctctga 208  Q
    ||||||    
T  12093264 ctctga 12093269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 19286228 - 19286155
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||| |||| | |||||| ||| | |||||||| ||||||||    
T  19286228 ttcttcttgtggtgtccattaccatacctcttcgacgcactcgcagaagattcagctttctcaaacacaatgat 19286155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 31354287 - 31354214
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | |||||||| ||||||||    
T  31354287 ttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagctttctcaaacacaatgat 31354214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 19208812 - 19208885
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| || ||| |||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  19208812 ttcttcttgtggtgtccattaccgtacttcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 19208885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 7732 - 7805
Alignment:
Q  124 ttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 197  Q
    |||||||||||||| ||||| || |||||||||||  |||| |||||||| ||| | |||||||| ||||||||    
T  7732 ttcttcttgtggtgtccattaccgtacctcttcgatgcactcgtagaagattcagctttctcaaacacaatgat 7805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 15369 - 15496
Alignment:
Q  70 acagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 169  Q
    ||||||||| | || ||||| |||| ||  |||||||| || || || || || |||||||||||||| ||||| || ||||| |||||  |||| ||||    
T  15369 acagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtag 15468  T
Q  170 aagactcacccttctcaaatacaatgat 197  Q
    |||| ||| | |||||||| ||||||||    
T  15469 aagattcagctttctcaaacacaatgat 15496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 8070 - 7961
Alignment:
Q  49 tgagcagcattaacaggggcgacagtagccgtagactgacctgctctagaggataccattccaacctctgtctccttcttcttgtggtggccattgccat 148  Q
    ||||| ||||| | ||| || |||||||||  ||| ||||| |||| ||  |||||||| || || || || || |||||||||||||| ||||| ||||    
T  8070 tgagctgcattgataggagcaacagtagccacagattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccat 7971  T
Q  149 acctcttcga 158  Q
    ||||||||||    
T  7970 acctcttcga 7961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University