View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8905A_low_311 (Length: 213)
Name: NF8905A_low_311
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8905A_low_311 |
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Alignment Details
Target: chr5 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 30255207 - 30255378
Alignment:
| Q |
30 |
ctttctagtttccaatctaaaccgccctcttttatcacatcccatttactacatcaatgctttaattaattttatttcttcattaaatattcaatctacg |
129 |
Q |
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| T |
30255207 |
ctttctagtttccaatctaaaccgccctcttttatcacatcccatttactacatcaatgctttaattaattttatttcttcattaaatattcaatctacg |
30255306 |
T |
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| Q |
130 |
tccccgtaagtatacctcagttgatagaaacatgcattatcatatgtaaggactgcggttcgaacaccaaac |
201 |
Q |
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| T |
30255307 |
tcctcgtaagcatacctcaattggtagagacatgcattgttatatgcaggcgctgcggttcgaaccccaaac |
30255378 |
T |
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