View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8905A_low_316 (Length: 210)
Name: NF8905A_low_316
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8905A_low_316 |
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Alignment Details
Target: chr4 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 38207661 - 38207801
Alignment:
| Q |
50 |
agaaaaatgtagtggagttgcaatttatagaatgaaatgaagtgtaaaggaaaaagagtggaagacgaaagagggaaagttttaagagtgtttttagcac |
149 |
Q |
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| T |
38207661 |
agaaaaatgtagtggagtagcaatttatagaatgaaatgaagtgtaaaggaaaaagagtggaagacgaaagagggaaagttttaagagtgtttttagcac |
38207760 |
T |
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| Q |
150 |
actcagactcagtctcacgccaaaaacgtactgtctatgtt |
190 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| |
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| T |
38207761 |
actcagactcagtctcacgccaaaaacgtactgtctctgtt |
38207801 |
T |
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