View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8905A_low_318 (Length: 210)

Name: NF8905A_low_318
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8905A_low_318
NF8905A_low_318
[»] chr4 (48 HSPs)
chr4 (1-121)||(38147568-38147688)
chr4 (1-43)||(7230279-7230321)
chr4 (1-43)||(7922270-7922312)
chr4 (1-43)||(21317358-21317400)
chr4 (2-43)||(54500568-54500609)
chr4 (2-42)||(8464096-8464136)
chr4 (3-43)||(14136090-14136130)
chr4 (1-41)||(22279540-22279580)
chr4 (1-41)||(46676518-46676558)
chr4 (1-49)||(56088093-56088141)
chr4 (1-43)||(2186353-2186395)
chr4 (1-43)||(10006339-10006381)
chr4 (1-43)||(10303531-10303573)
chr4 (3-41)||(10519136-10519174)
chr4 (1-43)||(12322672-12322714)
chr4 (1-43)||(14577527-14577569)
chr4 (1-43)||(19124642-19124684)
chr4 (1-43)||(20799414-20799456)
chr4 (1-43)||(29908055-29908097)
chr4 (1-43)||(32180829-32180871)
chr4 (1-43)||(36203235-36203277)
chr4 (1-43)||(42316844-42316886)
chr4 (1-43)||(49473644-49473686)
chr4 (1-43)||(50362159-50362201)
chr4 (1-43)||(52270050-52270092)
chr4 (1-43)||(56497628-56497670)
chr4 (1-42)||(6087747-6087788)
chr4 (1-42)||(19854565-19854606)
chr4 (1-42)||(19908692-19908733)
chr4 (1-42)||(20383488-20383529)
chr4 (2-43)||(21266903-21266944)
chr4 (3-48)||(24785484-24785529)
chr4 (3-48)||(24822737-24822782)
chr4 (1-42)||(31780745-31780786)
chr4 (1-42)||(34247440-34247481)
chr4 (2-43)||(37208039-37208080)
chr4 (1-42)||(38416057-38416098)
chr4 (1-42)||(55924807-55924848)
chr4 (1-41)||(6789446-6789486)
chr4 (1-41)||(11286801-11286841)
chr4 (1-41)||(11949783-11949823)
chr4 (3-43)||(18915068-18915108)
chr4 (1-41)||(31760247-31760287)
chr4 (1-37)||(43782325-43782361)
chr4 (1-49)||(45970727-45970775)
chr4 (1-37)||(46409501-46409537)
chr4 (1-37)||(49949339-49949375)
chr4 (1-37)||(56551612-56551648)
[»] scaffold0896 (1 HSPs)
scaffold0896 (1-43)||(3140-3182)
[»] chr8 (34 HSPs)
chr8 (1-51)||(17704004-17704054)
chr8 (1-43)||(13286130-13286172)
chr8 (1-43)||(19778064-19778106)
chr8 (1-43)||(27191757-27191799)
chr8 (1-43)||(37015856-37015898)
chr8 (1-42)||(30623293-30623334)
chr8 (2-43)||(44293574-44293615)
chr8 (3-51)||(3889881-3889929)
chr8 (2-42)||(8910002-8910042)
chr8 (1-56)||(10152442-10152497)
chr8 (1-43)||(11708985-11709027)
chr8 (1-43)||(13477899-13477941)
chr8 (1-43)||(23816789-23816831)
chr8 (1-43)||(27587220-27587262)
chr8 (1-43)||(27750924-27750966)
chr8 (1-43)||(32878660-32878702)
chr8 (1-43)||(36781407-36781449)
chr8 (1-43)||(39821883-39821925)
chr8 (1-43)||(43962044-43962086)
chr8 (1-50)||(8717495-8717544)
chr8 (1-42)||(30427731-30427772)
chr8 (2-43)||(35682713-35682754)
chr8 (14-43)||(38204441-38204470)
chr8 (2-42)||(574384-574424)
chr8 (3-43)||(1244727-1244767)
chr8 (1-41)||(9019584-9019624)
chr8 (1-41)||(9656017-9656057)
chr8 (1-49)||(10601756-10601804)
chr8 (1-41)||(15438454-15438494)
chr8 (1-41)||(15529758-15529798)
chr8 (2-50)||(16823206-16823254)
chr8 (3-43)||(19488299-19488339)
chr8 (1-41)||(30417630-30417670)
chr8 (1-41)||(36018550-36018590)
[»] chr6 (29 HSPs)
chr6 (1-43)||(8810639-8810681)
chr6 (1-43)||(4450261-4450303)
chr6 (1-43)||(5040853-5040895)
chr6 (1-43)||(7081674-7081716)
chr6 (1-40)||(334142-334181)
chr6 (3-42)||(26522472-26522511)
chr6 (1-43)||(331906-331948)
chr6 (1-43)||(788865-788907)
chr6 (1-43)||(5655327-5655369)
chr6 (1-43)||(7083012-7083054)
chr6 (1-43)||(8381214-8381256)
chr6 (1-43)||(10118916-10118958)
chr6 (1-43)||(10780127-10780169)
chr6 (1-43)||(17829328-17829370)
chr6 (1-43)||(18256882-18256924)
chr6 (1-43)||(20568311-20568353)
chr6 (1-43)||(20744137-20744179)
chr6 (1-43)||(28046198-28046240)
chr6 (1-43)||(32053787-32053829)
chr6 (1-42)||(655769-655810)
chr6 (2-43)||(6470637-6470678)
chr6 (1-42)||(18254121-18254162)
chr6 (1-42)||(21936053-21936094)
chr6 (2-43)||(30370171-30370212)
chr6 (1-42)||(30960073-30960114)
chr6 (2-42)||(14585164-14585204)
chr6 (1-49)||(17382077-17382125)
chr6 (1-37)||(19554158-19554194)
chr6 (1-41)||(21847195-21847235)
[»] chr3 (43 HSPs)
chr3 (1-42)||(13042820-13042861)
chr3 (1-42)||(13050897-13050938)
chr3 (1-43)||(1149089-1149131)
chr3 (1-43)||(8113582-8113624)
chr3 (1-43)||(16980374-16980416)
chr3 (1-42)||(23147998-23148039)
chr3 (2-43)||(48376834-48376875)
chr3 (2-50)||(21245785-21245833)
chr3 (2-42)||(22843464-22843504)
chr3 (3-43)||(46469276-46469316)
chr3 (1-41)||(50570209-50570249)
chr3 (1-41)||(52119377-52119417)
chr3 (1-36)||(2662098-2662133)
chr3 (1-43)||(5702198-5702239)
chr3 (1-43)||(7868721-7868763)
chr3 (1-43)||(10498715-10498757)
chr3 (1-39)||(10926472-10926510)
chr3 (1-43)||(16792994-16793036)
chr3 (1-43)||(17588361-17588403)
chr3 (1-43)||(18870745-18870787)
chr3 (1-43)||(21914855-21914897)
chr3 (5-43)||(23882829-23882867)
chr3 (1-43)||(27185476-27185518)
chr3 (1-43)||(33223867-33223909)
chr3 (1-43)||(35191837-35191879)
chr3 (1-39)||(35863833-35863871)
chr3 (1-43)||(48315044-48315086)
chr3 (1-43)||(52904163-52904205)
chr3 (1-43)||(53207969-53208011)
chr3 (1-42)||(4402105-4402146)
chr3 (2-43)||(5117207-5117248)
chr3 (1-42)||(13800667-13800708)
chr3 (1-42)||(21513288-21513329)
chr3 (1-42)||(30200826-30200867)
chr3 (2-43)||(35392002-35392043)
chr3 (2-39)||(45254234-45254271)
chr3 (1-42)||(53996299-53996340)
chr3 (3-43)||(13992670-13992710)
chr3 (1-41)||(21914091-21914131)
chr3 (1-41)||(29631187-29631227)
chr3 (8-44)||(32951915-32951951)
chr3 (3-43)||(47377371-47377411)
chr3 (1-41)||(54230119-54230159)
[»] chr1 (34 HSPs)
chr1 (2-49)||(41677611-41677658)
chr1 (1-43)||(17283950-17283992)
chr1 (1-43)||(19620575-19620617)
chr1 (1-43)||(34733399-34733441)
chr1 (1-43)||(38448886-38448928)
chr1 (1-43)||(52441531-52441573)
chr1 (2-43)||(7925363-7925404)
chr1 (2-43)||(36371061-36371102)
chr1 (2-42)||(41926822-41926862)
chr1 (4-43)||(23228518-23228557)
chr1 (4-43)||(47528470-47528509)
chr1 (1-43)||(5907798-5907840)
chr1 (1-43)||(8148385-8148427)
chr1 (1-43)||(8269388-8269430)
chr1 (1-43)||(18166601-18166643)
chr1 (1-43)||(21400043-21400085)
chr1 (1-43)||(31890769-31890811)
chr1 (1-43)||(34632168-34632210)
chr1 (1-43)||(42045392-42045434)
chr1 (1-43)||(45140026-45140068)
chr1 (1-43)||(49183172-49183214)
chr1 (1-43)||(49875619-49875661)
chr1 (1-39)||(50638936-50638974)
chr1 (2-43)||(3136709-3136750)
chr1 (1-42)||(8253739-8253780)
chr1 (2-43)||(15729429-15729470)
chr1 (1-42)||(28039880-28039921)
chr1 (1-42)||(34808583-34808624)
chr1 (2-43)||(50849094-50849135)
chr1 (3-43)||(7484716-7484756)
chr1 (1-49)||(15803257-15803305)
chr1 (3-43)||(17139539-17139579)
chr1 (22-54)||(35605670-35605702)
chr1 (1-41)||(50263381-50263421)
[»] chr7 (46 HSPs)
chr7 (1-43)||(8683069-8683111)
chr7 (1-42)||(8615023-8615064)
chr7 (1-42)||(21050242-21050283)
chr7 (1-42)||(23069877-23069918)
chr7 (1-42)||(24991781-24991822)
chr7 (1-42)||(46987086-46987127)
chr7 (3-43)||(1398419-1398459)
chr7 (3-43)||(5352328-5352368)
chr7 (3-43)||(36803837-36803877)
chr7 (1-43)||(2618678-2618720)
chr7 (1-43)||(4340126-4340168)
chr7 (1-43)||(5584646-5584688)
chr7 (1-43)||(5589606-5589648)
chr7 (1-43)||(7872768-7872810)
chr7 (1-43)||(8879767-8879809)
chr7 (1-43)||(10244726-10244768)
chr7 (1-43)||(13044162-13044204)
chr7 (1-39)||(18714451-18714489)
chr7 (1-43)||(20521051-20521093)
chr7 (1-43)||(25246770-25246812)
chr7 (1-43)||(32566061-32566103)
chr7 (1-43)||(37930043-37930085)
chr7 (1-43)||(38088037-38088079)
chr7 (1-43)||(39801705-39801747)
chr7 (1-43)||(39926558-39926600)
chr7 (1-43)||(40762227-40762269)
chr7 (1-43)||(41029271-41029313)
chr7 (1-43)||(42435418-42435460)
chr7 (1-43)||(48007567-48007609)
chr7 (2-43)||(1120052-1120093)
chr7 (1-42)||(3196662-3196703)
chr7 (1-42)||(25888900-25888941)
chr7 (2-39)||(26920735-26920772)
chr7 (2-43)||(28012635-28012676)
chr7 (6-43)||(28703507-28703544)
chr7 (1-42)||(30296333-30296374)
chr7 (1-42)||(34885874-34885915)
chr7 (2-43)||(37656472-37656513)
chr7 (1-42)||(37864425-37864466)
chr7 (1-49)||(3953434-3953482)
chr7 (3-43)||(5526724-5526764)
chr7 (1-41)||(7481226-7481266)
chr7 (2-42)||(23221392-23221432)
chr7 (3-43)||(32263006-32263046)
chr7 (1-49)||(41527553-41527601)
chr7 (3-43)||(48980486-48980526)
[»] chr5 (40 HSPs)
chr5 (1-43)||(16133085-16133127)
chr5 (1-43)||(17338723-17338765)
chr5 (1-43)||(19248478-19248520)
chr5 (1-43)||(27679497-27679539)
chr5 (1-43)||(31308663-31308705)
chr5 (1-43)||(35109399-35109441)
chr5 (1-43)||(36321514-36321556)
chr5 (2-42)||(9123866-9123906)
chr5 (1-43)||(3445267-3445309)
chr5 (1-43)||(5485185-5485227)
chr5 (1-43)||(6375522-6375564)
chr5 (1-43)||(6489006-6489048)
chr5 (1-43)||(11844458-11844500)
chr5 (1-43)||(15889410-15889452)
chr5 (1-43)||(30893932-30893974)
chr5 (1-43)||(34206226-34206268)
chr5 (1-43)||(34436850-34436892)
chr5 (1-43)||(37614447-37614489)
chr5 (1-43)||(37932329-37932371)
chr5 (1-47)||(39914896-39914942)
chr5 (1-42)||(1642334-1642375)
chr5 (2-43)||(3955545-3955586)
chr5 (1-42)||(18489096-18489137)
chr5 (1-42)||(20927639-20927680)
chr5 (1-42)||(22498942-22498983)
chr5 (1-42)||(25796428-25796469)
chr5 (2-43)||(26409252-26409293)
chr5 (6-43)||(28604443-28604480)
chr5 (1-42)||(33906500-33906541)
chr5 (2-43)||(34702489-34702530)
chr5 (1-42)||(40056610-40056651)
chr5 (1-37)||(5846034-5846070)
chr5 (3-43)||(10199018-10199058)
chr5 (1-49)||(11017169-11017217)
chr5 (1-41)||(13409429-13409469)
chr5 (1-41)||(16752522-16752562)
chr5 (2-42)||(17861456-17861496)
chr5 (1-41)||(18391601-18391641)
chr5 (1-41)||(31159430-31159470)
chr5 (1-41)||(43108570-43108610)
[»] chr2 (46 HSPs)
chr2 (1-43)||(7206124-7206166)
chr2 (1-43)||(10156016-10156058)
chr2 (1-43)||(18231493-18231535)
chr2 (1-43)||(19179070-19179112)
chr2 (1-43)||(22608526-22608568)
chr2 (1-43)||(24593375-24593417)
chr2 (1-43)||(37320537-37320579)
chr2 (1-43)||(44496720-44496762)
chr2 (3-48)||(9459079-9459124)
chr2 (2-51)||(10332296-10332345)
chr2 (1-42)||(20120741-20120782)
chr2 (1-42)||(24520659-24520700)
chr2 (3-43)||(7413211-7413251)
chr2 (2-42)||(13000685-13000725)
chr2 (3-43)||(24548010-24548050)
chr2 (3-43)||(27934879-27934919)
chr2 (1-41)||(40099403-40099443)
chr2 (3-43)||(40896531-40896571)
chr2 (1-48)||(12124678-12124725)
chr2 (1-43)||(5676738-5676780)
chr2 (1-43)||(7029411-7029453)
chr2 (1-43)||(9383229-9383271)
chr2 (1-43)||(12124544-12124586)
chr2 (1-43)||(20565095-20565137)
chr2 (1-43)||(22523032-22523074)
chr2 (1-43)||(24393244-24393286)
chr2 (1-43)||(28771581-28771623)
chr2 (1-43)||(39068728-39068770)
chr2 (1-43)||(43117210-43117252)
chr2 (2-40)||(43826463-43826501)
chr2 (2-43)||(2429015-2429056)
chr2 (1-42)||(4056790-4056831)
chr2 (1-42)||(4897543-4897584)
chr2 (1-42)||(4944937-4944978)
chr2 (6-43)||(7052772-7052809)
chr2 (1-42)||(18324914-18324955)
chr2 (2-43)||(27412857-27412898)
chr2 (1-42)||(39088819-39088860)
chr2 (2-43)||(44926422-44926463)
chr2 (3-43)||(2661070-2661110)
chr2 (4-48)||(9752120-9752164)
chr2 (2-50)||(20517014-20517062)
chr2 (1-41)||(26133540-26133580)
chr2 (3-43)||(30243249-30243289)
chr2 (2-42)||(33832690-33832730)
chr2 (1-41)||(35685081-35685121)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-49)||(25382-25430)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-43)||(34908-34950)
[»] scaffold0118 (1 HSPs)
scaffold0118 (1-43)||(39997-40039)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1-43)||(18292-18334)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-43)||(239806-239848)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-42)||(42354-42395)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-42)||(75325-75366)
[»] scaffold0197 (1 HSPs)
scaffold0197 (3-43)||(21777-21817)
[»] scaffold0098 (1 HSPs)
scaffold0098 (3-43)||(5424-5464)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-41)||(25696-25736)


Alignment Details
Target: chr4 (Bit Score: 97; Significance: 7e-48; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 38147568 - 38147688
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggatatcctttagtttatttaaatgaaagagaatgcctaagaaaaagaattattta 100  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  38147568 gcatatattataaattgtctttaccaactgagttaagctcgcgcggatatcctttagtttatttaaatgaaagagaatgtgtaagaaaaagaaatattta 38147667  T
Q  101 gattagaaagaatgattggtt 121  Q
    |||||||||||||||||||||    
T  38147668 gattagaaagaatgattggtt 38147688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7230321 - 7230279
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  7230321 gcatatattatgcattgtccttaccaactgagctaagctcacg 7230279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7922270 - 7922312
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  7922270 gcatatattatgcattgtctttaccaactgagataagctcacg 7922312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21317358 - 21317400
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  21317358 gcatatattatgcattgtctctaccaactgagctaagctcacg 21317400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 54500609 - 54500568
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  54500609 catatattatgcattgtctctaccaactgagctaagctcacg 54500568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 8464096 - 8464136
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  8464096 catatattatgtattgtccttaccaactgagctaagctcac 8464136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 14136130 - 14136090
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  14136130 atatattatgcattgtctttatcaactgagctaagctcacg 14136090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22279540 - 22279580
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  22279540 gcatatattatgcattgtccttaccaactgagctaagctca 22279580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46676518 - 46676558
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  46676518 gcatatattatgcattgtccttaccaactgagctaagctca 46676558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 56088093 - 56088141
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggata 49  Q
    |||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  56088093 gcatatattatgtattgtccttaccaattgagctaagctcacgtggata 56088141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2186353 - 2186395
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  2186353 gcatatattatgcattgtccataccaactgagctaagctcacg 2186395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10006381 - 10006339
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||||||||||| ||| |||||||||||    
T  10006381 gcatatattatgcattgtctttaccaaatgacctaagctcacg 10006339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10303531 - 10303573
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||| ||||| |||||| |||||||||||||||||||||||    
T  10303531 gcatattttatgcattgtccttaccaactgagctaagctcacg 10303573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 10519174 - 10519136
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  10519174 atatattatgcattgtctataccaactgagctaagctca 10519136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12322714 - 12322672
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  12322714 gcatatattatgcattgtccgtaccaactgagctaagctcacg 12322672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14577527 - 14577569
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||| ||||||    
T  14577527 gcatatattatgcattgtccttaccaactgagctaaactcacg 14577569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19124642 - 19124684
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||||||| |||||||| ||||||||||    
T  19124642 gcatatattatgtattgtctttatcaactgagttaagctcacg 19124684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20799414 - 20799456
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  20799414 gcatatattatgcattgtccctaccaactgagctaagctcacg 20799456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29908097 - 29908055
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||| ||||||||||    
T  29908097 gcatatattatgcattgtccttaccaactgagttaagctcacg 29908055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32180871 - 32180829
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||    
T  32180871 gcatattttatgcattgtctataccaactgagctaagctcacg 32180829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36203277 - 36203235
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||| |||||||||||||||||||    
T  36203277 gcatatattatgcattgtccttatcaactgagctaagctcacg 36203235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42316844 - 42316886
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| | ||||||||||||||||| ||||||||||    
T  42316844 gcatatattatgcactgtctttaccaactgagttaagctcacg 42316886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49473686 - 49473644
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||| ||||||||||||    
T  49473686 gcatatattatgcattgtccttaccaactgggctaagctcacg 49473644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 50362159 - 50362201
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  50362159 gcatatattatgcattgtccctaccaactgagctaagctcacg 50362201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 52270050 - 52270092
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  52270050 gcatatattatgcattgtccataccaactgagctaagctcacg 52270092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 56497628 - 56497670
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||||||| |||||||||||||||    
T  56497628 gcatatattatgcattgtccttaccaattgagctaagctcacg 56497670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6087788 - 6087747
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| ||| ||| |||||||||||||||||||||    
T  6087788 gcatatattatgcattatctataccaactgagctaagctcac 6087747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19854606 - 19854565
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  19854606 gcatatattatgcattgtccataccaactgagctaagctcac 19854565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19908733 - 19908692
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| |||||||||||| |||||||||    
T  19908733 gcatatattatgcattgtccttaccaactgagttaagctcac 19908692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20383529 - 20383488
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  20383529 gcatatattatgcattgtccataccaactgagctaagctcac 20383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 21266903 - 21266944
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| |||||||||| ||| |||||||||||||||    
T  21266903 catatattatgcattgtctttaacaattgagctaagctcacg 21266944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 24785484 - 24785529
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacgcggat 48  Q
    |||||||||| |||||| |||||||||||||| |||||||| ||||    
T  24785484 atatattatgcattgtccttaccaactgagcttagctcacggggat 24785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 24822782 - 24822737
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacgcggat 48  Q
    |||||||||| |||||| |||||||||||||| |||||||| ||||    
T  24822782 atatattatgcattgtccttaccaactgagcttagctcacggggat 24822737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31780786 - 31780745
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||| ||||| |||||| ||||||||||||||||||||||    
T  31780786 gcatattttatgcattgtccttaccaactgagctaagctcac 31780745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34247481 - 34247440
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| |||||||||||||||| |||||    
T  34247481 gcatatattatgcattgtccttaccaactgagctaaactcac 34247440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 37208080 - 37208039
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| |||||||||||||| ||| |||||||||||    
T  37208080 catatattatgtattgtctttaccaattgaactaagctcacg 37208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38416098 - 38416057
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| ||| || ||||||||||||||||||||||    
T  38416098 gcatatattatgcattatccttaccaactgagctaagctcac 38416057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 55924807 - 55924848
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| ||||||| ||||||||||||||    
T  55924807 gcatatattatgtattgtccttaccaattgagctaagctcac 55924848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6789446 - 6789486
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    ||||||| |||| |||||| |||||||||||||||||||||    
T  6789446 gcatatactatgcattgtccttaccaactgagctaagctca 6789486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11286801 - 11286841
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| ||||||| |||||||||| |||||||||    
T  11286801 gcatatattatgcattgtctctaccaactgaactaagctca 11286841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11949783 - 11949823
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  11949783 gcatatattatgcattgtccataccaactgagctaagctca 11949823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 18915068 - 18915108
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||| |||||||||||||||| ||||||    
T  18915068 atatattatgcattgtccttaccaactgagctaaactcacg 18915108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31760287 - 31760247
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||  ||||||| ||||||||||||||||||||    
T  31760287 gcatatattatacattgtctataccaactgagctaagctca 31760247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43782325 - 43782361
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaag 37  Q
    |||||||||||| |||||| |||||||||||||||||    
T  43782325 gcatatattatgcattgtcattaccaactgagctaag 43782361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45970727 - 45970775
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggata 49  Q
    |||||||||||| ||||| | ||||||||||| |||||||||| |||||    
T  45970727 gcatatattatgcattgtttctaccaactgagttaagctcacgaggata 45970775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 46409501 - 46409537
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaag 37  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  46409501 gcatatattatgcattgtctttaccaactgagttaag 46409537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 49949375 - 49949339
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaag 37  Q
    |||||||||||| |||||| |||||||||||||||||    
T  49949375 gcatatattatgcattgtccttaccaactgagctaag 49949339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 56551612 - 56551648
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaag 37  Q
    |||||||||||| |||||| |||||||||||||||||    
T  56551612 gcatatattatgcattgtccttaccaactgagctaag 56551648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3182 - 3140
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  3182 gcatatattatgtattgtctttaccaactgagctaagctcacg 3140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17704054 - 17704004
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggatatc 51  Q
    |||||||||||| |||||| ||||||||||||||||||||||| |||||||    
T  17704054 gcatatattatgcattgtccttaccaactgagctaagctcacgaggatatc 17704004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13286172 - 13286130
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  13286172 gcatatattatgcattgtctataccaactgagctaagctcacg 13286130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19778106 - 19778064
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  19778106 gcatatattatgcattgtccttaccaactgagctaagctcacg 19778064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27191799 - 27191757
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  27191799 gcatatattatgaattgttcttaccaactgagctaagctcacg 27191757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37015856 - 37015898
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  37015856 gcatatattatgcattgtctctaccaactgagctaagctcacg 37015898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30623334 - 30623293
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  30623334 gcatatattatgcattgtccttaccaactgagctaagctcac 30623293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 44293615 - 44293574
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  44293615 catatattatgcattgtctataccaactgagctaagctcacg 44293574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 3889929 - 3889881
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacgcggatatc 51  Q
    |||||||||| |||||||||||||||| ||||||| ||||| |||||||    
T  3889929 atatattatgcattgtctttaccaactaagctaagttcacggggatatc 3889881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 8910002 - 8910042
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  8910002 catatattatgcattgtccttaccaactgagctaagctcac 8910042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10152497 - 10152442
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggatatccttta 56  Q
    |||||| ||||  ||||||| |||||||||||||||||||||| ||||||| ||||    
T  10152497 gcatattttatacattgtctataccaactgagctaagctcacgaggatatcgttta 10152442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11709027 - 11708985
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  11709027 gcatatattatgcattgtccctaccaactgagctaagctcacg 11708985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13477941 - 13477899
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||||||||| |||||||||||||    
T  13477941 gcatatattatgcattgtccttaccaactcagctaagctcacg 13477899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23816831 - 23816789
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||| || |||||||||||||||||||||||    
T  23816831 gcatatattatgcattatccttaccaactgagctaagctcacg 23816789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27587262 - 27587220
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||| ||| |||||| |||||||||||||||||||||||    
T  27587262 gcatatatcatgcattgtccttaccaactgagctaagctcacg 27587220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27750924 - 27750966
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| | |||| |||||||||||||||||||||||    
T  27750924 gcatatattatgcactgtccttaccaactgagctaagctcacg 27750966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32878702 - 32878660
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||  |||||||||||||||||||||||    
T  32878702 gcatatattatgcattgttcttaccaactgagctaagctcacg 32878660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36781449 - 36781407
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||||||||||||||| |||||||    
T  36781449 gcatatattatgtattgtccttaccaactgagctaggctcacg 36781407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39821925 - 39821883
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  39821925 gcatatattatgcattgtccctaccaactgagctaagctcacg 39821883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 43962044 - 43962086
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||| ||||    
T  43962044 gcatatattatgtattgtccttaccaactgagctaagcccacg 43962086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8717495 - 8717544
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggatat 50  Q
    |||||||||||| ||||||  ||||||||||||||| |||||| ||||||    
T  8717495 gcatatattatgcattgtccataccaactgagctaaactcacgaggatat 8717544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30427772 - 30427731
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  30427772 gcatatattatgcattgtccataccaactgagctaagctcac 30427731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 35682713 - 35682754
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  35682713 catatattatggattgtccgtaccaactgagctaagctcacg 35682754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 43
Target Start/End: Original strand, 38204441 - 38204470
Alignment:
Q  14 attgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||||||||||||||||||||||    
T  38204441 attgtctttaccaactgagctaagctcacg 38204470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 574424 - 574384
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||| ||||||| || ||||||||||||||||||    
T  574424 catatattatgcattgtctatatcaactgagctaagctcac 574384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 1244727 - 1244767
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||| ||||||||||||||||| |||||    
T  1244727 atatattatgcattgtccttaccaactgagctaagttcacg 1244767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9019584 - 9019624
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| ||||||||||||||||| | ||||||||    
T  9019584 gcatatattatgcattgtctttaccaactgcgttaagctca 9019624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9656017 - 9656057
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||| ||||| |||||| |||||||||||||||||||||    
T  9656017 gcatattttatgcattgtccttaccaactgagctaagctca 9656057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10601804 - 10601756
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggata 49  Q
    |||||||||||| ||||||  ||||||||||  ||||||||||||||||    
T  10601804 gcatatattatgcattgtccataccaactgaattaagctcacgcggata 10601756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15438494 - 15438454
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||| ||||||| |||||||||||||    
T  15438494 gcatatattatgcattgtccttaccaagtgagctaagctca 15438454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15529798 - 15529758
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||| ||||||| |||||||||||||    
T  15529798 gcatatattatgcattgtccttaccaagtgagctaagctca 15529758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 16823206 - 16823254
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacgcggatat 50  Q
    ||||||||||| || |||| ||||||||||| |||||||||| ||||||    
T  16823206 catatattatgtatagtctataccaactgagttaagctcacgaggatat 16823254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 19488339 - 19488299
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||| ||||||||||||||| |||||||    
T  19488339 atatattatgcattgtccttaccaactgagctatgctcacg 19488299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30417630 - 30417670
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||  ||||||| ||||||||||||||||||||    
T  30417630 gcatatattatacattgtctataccaactgagctaagctca 30417670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36018550 - 36018590
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| ||||||| |||||||| |||||||||||    
T  36018550 gcatatattatgcattgtctctaccaactaagctaagctca 36018590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8810681 - 8810639
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  8810681 gcatatattatgtattgtctttaccaactgagctaagctcacg 8810639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4450303 - 4450261
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  4450303 gcatatattatgcattgtctttatcaactgagctaagctcacg 4450261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5040853 - 5040895
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||||  |||||||||||||||||||||||||||||    
T  5040853 gcatatattatgttttgtctttaccaactgagctaagctcacg 5040895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7081674 - 7081716
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  7081674 gcatatattatgtattgtctttatcaactgagctaagctcacg 7081716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 334181 - 334142
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctc 40  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  334181 gcatatattatgcattgtctttatcaactgagctaagctc 334142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 26522511 - 26522472
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  26522511 atatattatgcattgtccttaccaactgagctaagctcac 26522472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 331906 - 331948
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||    
T  331906 gcatatattatgcattgtctctaccaactgagttaagctcacg 331948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 788907 - 788865
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||| ||||||||||    
T  788907 gcatatattatgcattgtccttaccaactgagataagctcacg 788865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5655327 - 5655369
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  5655327 gcatatattatgtattgtccctaccaactgagctaagctcacg 5655369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7083012 - 7083054
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||||||| |||||||||||||||    
T  7083012 gcatatattatgcattgtccttaccaattgagctaagctcacg 7083054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8381214 - 8381256
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||    
T  8381214 gcatatgttatgcattgtctttaccaactgagttaagctcacg 8381256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10118958 - 10118916
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||  |||||||||||||||||||||||    
T  10118958 gcatatattatgtattgttcttaccaactgagctaagctcacg 10118916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10780127 - 10780169
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  10780127 gcatatattatgcattgtccctaccaactgagctaagctcacg 10780169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17829328 - 17829370
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| || ||| |||||||||||||||||||||||    
T  17829328 gcatatattatgcatagtccttaccaactgagctaagctcacg 17829370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18256924 - 18256882
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||| |||||||||||||||||||    
T  18256924 gcatatattatgcattgtccttatcaactgagctaagctcacg 18256882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20568311 - 20568353
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| | |||| |||||||||||||||||||||||    
T  20568311 gcatatattatgcaatgtccttaccaactgagctaagctcacg 20568353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20744179 - 20744137
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  20744179 gcatatattatgcattgtccataccaactgagctaagctcacg 20744137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28046198 - 28046240
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||||||| ||||||| |||||||||||    
T  28046198 gcatatattatgcattgtctttatcaactgaactaagctcacg 28046240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32053829 - 32053787
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  32053829 gcatatattatgcattgtccataccaactgagctaagctcacg 32053787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 655769 - 655810
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  655769 gcatatattatgcattgtcgataccaactgagctaagctcac 655810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 6470637 - 6470678
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| |||||||||| |||||||| ||||||||||    
T  6470637 catatattatgcattgtctttatcaactgagttaagctcacg 6470678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18254121 - 18254162
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||| ||||||| |||||| ||||||||||||||||||||||    
T  18254121 gcatgtattatgcattgtccttaccaactgagctaagctcac 18254162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21936053 - 21936094
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||||||||||  |||||||||||||||| |||||    
T  21936053 gcatatattatgaattgttcttaccaactgagctaaactcac 21936094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 30370171 - 30370212
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| ||| |||||||||||||| |||||||||||    
T  30370171 catatattatgcattatctttaccaactgaactaagctcacg 30370212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30960073 - 30960114
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||| | |||||| ||||||||||||||||||||||    
T  30960073 gcatatattaagcattgtccttaccaactgagctaagctcac 30960114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 14585204 - 14585164
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||| ||| |||| |||||||||||||||||||||    
T  14585204 catatattataaatcgtctctaccaactgagctaagctcac 14585164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17382125 - 17382077
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggata 49  Q
    |||||||||||  ||||||  |||||||||||||||||||||| |||||    
T  17382125 gcatatattatacattgtccataccaactgagctaagctcacgaggata 17382077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19554194 - 19554158
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaag 37  Q
    |||||||||||| |||||||||||||||| |||||||    
T  19554194 gcatatattatgcattgtctttaccaactaagctaag 19554158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21847235 - 21847195
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  21847235 gcatatattatgtattgtccctaccaactgagctaagctca 21847195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13042820 - 13042861
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  13042820 gcatatattataaattgtctttaccaactgagctaagctcac 13042861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13050897 - 13050938
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  13050897 gcatatattataaattgtctttaccaactgagctaagctcac 13050938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1149089 - 1149131
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  1149089 gcatatattatgcattgtccttaccaactgagctaagctcacg 1149131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8113582 - 8113624
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  8113582 gcatatattatgcattgtccttaccaactgagctaagctcacg 8113624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16980374 - 16980416
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  16980374 gcatatattatgcattgtccttaccaactgagctaagctcacg 16980416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23147998 - 23148039
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  23147998 gcatatattatgtattgtccttaccaactgagctaagctcac 23148039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 48376875 - 48376834
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  48376875 catatattatgcattatctttaccaactgagctaagctcacg 48376834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 21245833 - 21245785
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacgcggatat 50  Q
    ||||||||||| |||||| ||||||||| |||||||||||||| |||||    
T  21245833 catatattatgcattgtccttaccaactaagctaagctcacgcagatat 21245785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 22843504 - 22843464
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  22843504 catatattatgcattgtctttactaactgagctaagctcac 22843464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 46469316 - 46469276
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  46469316 atatattatgcattgtccttaccaactgagctaagctcacg 46469276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 50570209 - 50570249
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  50570209 gcatatattatgcattgtctataccaactgagctaagctca 50570249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 52119417 - 52119377
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  52119417 gcatatattatgcattgtccttaccaactgagctaagctca 52119377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 2662133 - 2662098
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaa 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  2662133 gcatatattatgcattgtctttaccaactgagctaa 2662098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5702198 - 5702239
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  5702198 gcatatattatgcattgtctt-accaactgagctaagctcacg 5702239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7868763 - 7868721
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||  |||||||||||||||||||||||    
T  7868763 gcatatattatgcattgttcttaccaactgagctaagctcacg 7868721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10498715 - 10498757
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  10498715 gcatatattatgcattgtccataccaactgagctaagctcacg 10498757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10926510 - 10926472
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagct 39  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  10926510 gcatatattatgcattgtccttaccaactgagctaagct 10926472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16792994 - 16793036
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||    
T  16792994 gcatatattatgcattgtctataccaactgtgctaagctcacg 16793036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17588403 - 17588361
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||| ||||||||||    
T  17588403 gcatatattatgcattgtccttaccaactgagttaagctcacg 17588361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18870745 - 18870787
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  18870745 gcatatattatgcattgtccctaccaactgagctaagctcacg 18870787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21914855 - 21914897
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||| |||||| |||||| |||||||||||||||||||||||    
T  21914855 gcatacattatgtattgtcattaccaactgagctaagctcacg 21914897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 23882867 - 23882829
Alignment:
Q  5 atattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  23882867 atattatgaattgtccttatcaactgagctaagctcacg 23882829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27185518 - 27185476
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  27185518 gcatatattatgtattgtccctaccaactgagctaagctcacg 27185476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33223909 - 33223867
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||| | ||||||||||||||||||||||    
T  33223909 gcatatattatgcattgtttctaccaactgagctaagctcacg 33223867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35191837 - 35191879
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||| ||||    
T  35191837 gcatatattatgcattgtccttaccaactgagctaagcgcacg 35191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35863833 - 35863871
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagct 39  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  35863833 gcatatattatgtattgtccttaccaactgagctaagct 35863871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 48315044 - 48315086
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||| || |||||||||||||||||||||||    
T  48315044 gcatatattatgcattatccttaccaactgagctaagctcacg 48315086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 52904163 - 52904205
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||| ||||||    
T  52904163 gcatatattatgcattgtccttaccaactgagctaacctcacg 52904205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 53208011 - 53207969
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||| | |||||||||||||||||||||||    
T  53208011 gcatatattatgcattgcccttaccaactgagctaagctcacg 53207969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4402146 - 4402105
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||  |||||| ||||||||||||||||||||||    
T  4402146 gcatatattatccattgtccttaccaactgagctaagctcac 4402105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 5117248 - 5117207
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| |||||| ||| |||||||||||||||||||    
T  5117248 catatattatgtattgtccttatcaactgagctaagctcacg 5117207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13800708 - 13800667
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||  ||||||||||||||||||||||    
T  13800708 gcatatattatgcattgttcttaccaactgagctaagctcac 13800667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21513329 - 21513288
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||| |||||| |||||| ||||||||||||||||||||||    
T  21513329 gcataaattatgcattgtccttaccaactgagctaagctcac 21513288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30200867 - 30200826
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| ||| ||||||||||||||||||    
T  30200867 gcatatattatgcattgtccttagcaactgagctaagctcac 30200826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 35392043 - 35392002
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| |||||| |||||||||||||||| ||||||    
T  35392043 catatattatgtattgtcattaccaactgagctaaactcacg 35392002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 45254271 - 45254234
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagct 39  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  45254271 catatattatgcattgtccttaccaactgagctaagct 45254234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 53996340 - 53996299
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  53996340 gcatatattatgcattgtccataccaactgagctaagctcac 53996299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 13992710 - 13992670
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||| |||||||||||||||||| ||||    
T  13992710 atatattatgcattgtccttaccaactgagctaagcacacg 13992670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21914091 - 21914131
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||| |||||||||||| ||||||||    
T  21914091 gcatatattatgcattgtccttaccaactgagttaagctca 21914131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29631227 - 29631187
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  29631227 gcatatattatgcattgtccataccaactgagctaagctca 29631187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 32951951 - 32951915
Alignment:
Q  8 ttatgaattgtctttaccaactgagctaagctcacgc 44  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  32951951 ttatgcattatctttaccaactgagctaagctcacgc 32951915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 47377371 - 47377411
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||| |||||||||||| ||||||||||    
T  47377371 atatattatgcattgtccttaccaactgagttaagctcacg 47377411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 54230119 - 54230159
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||| |||||||||||||||| ||||    
T  54230119 gcatatattatgcattgtccttaccaactgagctaaactca 54230159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 41677611 - 41677658
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacgcggata 49  Q
    ||||||||||| |||||| ||||||||||||||||||||||| |||||    
T  41677611 catatattatgtattgtccttaccaactgagctaagctcacggggata 41677658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17283992 - 17283950
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  17283992 gcatatattatgcattgtccttaccaactgagctaagctcacg 17283950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19620617 - 19620575
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  19620617 gcatatattatgtattgtccttaccaactgagctaagctcacg 19620575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34733441 - 34733399
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  34733441 gcatatattatgcattgtccttaccaactgagctaagctcacg 34733399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38448886 - 38448928
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  38448886 gcatatattatgcattgtccttaccaactgagctaagctcacg 38448928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 52441531 - 52441573
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  52441531 gcatatattatgcattgtctataccaactgagctaagctcacg 52441573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 7925404 - 7925363
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  7925404 catatattatgcattgtctctaccaactgagctaagctcacg 7925363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 36371061 - 36371102
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  36371061 catatattatgcattgtctctaccaactgagctaagctcacg 36371102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 41926862 - 41926822
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  41926862 catatattatgcattgtccttaccaactgagctaagctcac 41926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 23228518 - 23228557
Alignment:
Q  4 tatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  23228518 tatattatgcattgtccttaccaactgagctaagctcacg 23228557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 47528470 - 47528509
Alignment:
Q  4 tatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  47528470 tatattatgcattgtccttaccaactgagctaagctcacg 47528509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5907840 - 5907798
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| || ||||||||||||||||||||    
T  5907840 gcatatattatgcattgtccttgccaactgagctaagctcacg 5907798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8148385 - 8148427
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||  |||||||||||||||||||||||    
T  8148385 gcatatattatgtattgttcttaccaactgagctaagctcacg 8148427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8269388 - 8269430
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||||||||||||||||| |||||    
T  8269388 gcatatattatgtattgtccttaccaactgagctaagttcacg 8269430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18166643 - 18166601
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||    
T  18166643 gcatatattatgcattgtctataccaactgagctaagcccacg 18166601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21400043 - 21400085
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  21400043 gcatatattatgcattgtccctaccaactgagctaagctcacg 21400085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31890769 - 31890811
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||| ||||||    
T  31890769 gcatatattatgcattgtccttaccaactgagctaaactcacg 31890811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34632210 - 34632168
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||  ||||||| ||||||||||||||||||||||    
T  34632210 gcatatattatacattgtctataccaactgagctaagctcacg 34632168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42045392 - 42045434
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  42045392 gcatatattatgcattgtccataccaactgagctaagctcacg 42045434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 45140026 - 45140068
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  45140026 gcatatattatgcattgtccataccaactgagctaagctcacg 45140068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49183214 - 49183172
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||| ||||||    
T  49183214 gcatatattatgtattgtccttaccaactgagctaaactcacg 49183172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 49875619 - 49875661
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||| ||||||||||    
T  49875619 gcatatattatgcattgtccttaccaactgagttaagctcacg 49875661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 50638936 - 50638974
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagct 39  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  50638936 gcatatattatgcattgtccttaccaactgagctaagct 50638974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 3136709 - 3136750
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| |||||||||||||| |||||| ||||||||    
T  3136709 catatattatgcattgtctttaccaattgagctcagctcacg 3136750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8253780 - 8253739
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  8253780 gcatatattatgcattgtccataccaactgagctaagctcac 8253739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 15729470 - 15729429
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||    
T  15729470 catatattatgcattgtctctaccaactgagttaagctcacg 15729429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28039880 - 28039921
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| |||||||||||| |||||||||    
T  28039880 gcatatattatgcattgtccttaccaactgagttaagctcac 28039921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34808583 - 34808624
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| ||| ||||||||||||||||||    
T  34808583 gcatatattatgcattgtccttaacaactgagctaagctcac 34808624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 50849094 - 50849135
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| |||||| |||||||||||| ||||||||||    
T  50849094 catatattatgcattgtcattaccaactgagttaagctcacg 50849135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 7484716 - 7484756
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| ||||||| ||||| ||||||||||||||||    
T  7484716 atatattatgcattgtctctaccagctgagctaagctcacg 7484756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15803257 - 15803305
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggata 49  Q
    |||||||||||| |||||| || |||||||| ||||||||||| |||||    
T  15803257 gcatatattatgcattgtccttgccaactgaactaagctcacggggata 15803305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 17139539 - 17139579
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| ||||||  ||||||||||||||||||||||    
T  17139539 atatattatgcattgtccctaccaactgagctaagctcacg 17139579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 35605670 - 35605702
Alignment:
Q  22 taccaactgagctaagctcacgcggatatcctt 54  Q
    |||||||||||||||||||||| ||||||||||    
T  35605670 taccaactgagctaagctcacggggatatcctt 35605702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50263421 - 50263381
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  50263421 gcatatattatgcattatcgttaccaactgagctaagctca 50263381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000007; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8683111 - 8683069
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  8683111 gcatatattatgcattgtctataccaactgagctaagctcacg 8683069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8615064 - 8615023
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  8615064 gcatatattatgcattgtccttaccaactgagctaagctcac 8615023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21050242 - 21050283
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  21050242 gcatatattatgcattgtccttaccaactgagctaagctcac 21050283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23069877 - 23069918
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||||  ||||||||||||||||||||||||||||    
T  23069877 gcatatattatgtgttgtctttaccaactgagctaagctcac 23069918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24991822 - 24991781
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  24991822 gcatatattatgcattgtccttaccaactgagctaagctcac 24991781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46987127 - 46987086
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  46987127 gcatatattatgcattgtccttaccaactgagctaagctcac 46987086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 1398419 - 1398459
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  1398419 atatattatgcattgtccttaccaactgagctaagctcacg 1398459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 5352368 - 5352328
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  5352368 atatattatgtattgtccttaccaactgagctaagctcacg 5352328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 36803877 - 36803837
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  36803877 atatattatgcattgtctctaccaactgagctaagctcacg 36803837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2618720 - 2618678
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||||||||||||| |||||||||    
T  2618720 gcatatattatgcattgtccttaccaactgagcgaagctcacg 2618678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4340168 - 4340126
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||| ||||||    
T  4340168 gcatatattatgcattgtccttaccaactgagctaatctcacg 4340126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5584688 - 5584646
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||| |||||||||| |||||||||||||||    
T  5584688 gcatatattatgtattatctttaccaattgagctaagctcacg 5584646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5589648 - 5589606
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||| |||||||||| |||||||||||||||    
T  5589648 gcatatattatgtattatctttaccaattgagctaagctcacg 5589606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7872768 - 7872810
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||||||||||||||||| |||||    
T  7872768 gcatatattatgcattgtccttaccaactgagctaagttcacg 7872810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8879767 - 8879809
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||    
T  8879767 gcatatattatgcattgtctataccaactgagttaagctcacg 8879809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10244768 - 10244726
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  10244768 gcatatattatgcattgtccataccaactgagctaagctcacg 10244726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13044162 - 13044204
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||| ||||| |||||| |||||||||||||||||||||||    
T  13044162 gcatattttatgcattgtccttaccaactgagctaagctcacg 13044204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18714489 - 18714451
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagct 39  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  18714489 gcatatattatgcattgtccttaccaactgagctaagct 18714451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20521051 - 20521093
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||| |||||| |||||| |||||||||||||||||||||||    
T  20521051 gcatacattatggattgtccttaccaactgagctaagctcacg 20521093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25246812 - 25246770
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||||||| |||||||||||| ||||||    
T  25246812 gcatatattatgcattgtctttatcaactgagctaaactcacg 25246770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32566061 - 32566103
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||  | ||||||||||||||||||||||||||||    
T  32566061 gcatatattatacactgtctttaccaactgagctaagctcacg 32566103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37930085 - 37930043
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||| ||||||||||    
T  37930085 gcatatattatgcattgtccttaccaactgagataagctcacg 37930043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38088037 - 38088079
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||||  ||||| |||||||||||||||||||||||    
T  38088037 gcatatattatgttttgtccttaccaactgagctaagctcacg 38088079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39801747 - 39801705
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  39801747 gcatatattatgcattgtccataccaactgagctaagctcacg 39801705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39926558 - 39926600
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||| |||||||||||||||||||    
T  39926558 gcatatattatgcattgtccttatcaactgagctaagctcacg 39926600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40762227 - 40762269
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||| ||||||||||||||||    
T  40762227 gcatatattatgcattgtccttaccatctgagctaagctcacg 40762269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41029313 - 41029271
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||  |||||| |||||||||||||||||||||||    
T  41029313 gcatatattatacattgtccttaccaactgagctaagctcacg 41029271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42435418 - 42435460
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| || |||| ||||||||||||||||||||||    
T  42435418 gcatatattatgcatagtctctaccaactgagctaagctcacg 42435460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 48007567 - 48007609
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||| ||||||||||    
T  48007567 gcatatattatgcattgtcattaccaactgagttaagctcacg 48007609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 1120052 - 1120093
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| |||||| | |||||||||||||||||||||    
T  1120052 catatattatgtattgtcctcaccaactgagctaagctcacg 1120093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3196662 - 3196703
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||  ||||||||||||||||||||||| |||||    
T  3196662 gcatatattatacattgtctttaccaactgagctaaactcac 3196703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25888941 - 25888900
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| || ||| ||||||||||||||||||||||    
T  25888941 gcatatattatgcatcgtccttaccaactgagctaagctcac 25888900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 26920735 - 26920772
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagct 39  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  26920735 catacattatgtattgtctttaccaactgagctaagct 26920772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 28012635 - 28012676
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| |||||| |||||||||||| ||||||||||    
T  28012635 catatattatgcattgtccttaccaactgagttaagctcacg 28012676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 28703544 - 28703507
Alignment:
Q  6 tattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  28703544 tattatgcattgtctttaccaactgagctaaactcacg 28703507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30296374 - 30296333
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||  |||||| ||||||||||||||||||||||    
T  30296374 gcatatattatacattgtccttaccaactgagctaagctcac 30296333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34885915 - 34885874
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||| ||| |||||||| ||||||||||||||||||||    
T  34885915 gcatatatcatgcattgtcttcaccaactgagctaagctcac 34885874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 37656472 - 37656513
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||| ||| |||||||||||||||||||    
T  37656472 catatattatgacttgtccttatcaactgagctaagctcacg 37656513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37864466 - 37864425
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||  ||||||||||||||||||||||    
T  37864466 gcatatattatgcattgtacttaccaactgagctaagctcac 37864425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3953482 - 3953434
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggata 49  Q
    |||||||||||| ||||||  |||| ||||||||||||||||| |||||    
T  3953482 gcatatattatgcattgtccataccgactgagctaagctcacgaggata 3953434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 5526764 - 5526724
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| ||||||  ||||||||||||||||||||||    
T  5526764 atatattatgcattgtccataccaactgagctaagctcacg 5526724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7481266 - 7481226
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    ||||| |||||| ||||||||||||||||||| ||||||||    
T  7481266 gcatacattatgtattgtctttaccaactgagttaagctca 7481226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 23221432 - 23221392
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  23221432 catatattatgcattgtctctaccaactgagttaagctcac 23221392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 32263046 - 32263006
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  32263046 atatattatacattgtctataccaactgagctaagctcacg 32263006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41527601 - 41527553
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggata 49  Q
    |||||||||||| ||||||  |||||||| ||||||||||||| |||||    
T  41527601 gcatatattatgcattgtccataccaactaagctaagctcacgaggata 41527553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 48980526 - 48980486
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| ||||||  ||||||||||||||||||||||    
T  48980526 atatattatgcattgtccataccaactgagctaagctcacg 48980486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000007; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16133085 - 16133127
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  16133085 gcatatattatgcattgtccttaccaactgagctaagctcacg 16133127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17338723 - 17338765
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||||||||||| |||||||||||||||    
T  17338723 gcatatattatgtattgtctttaccaattgagctaagctcacg 17338765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19248520 - 19248478
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  19248520 gcatatattatgcattgtctataccaactgagctaagctcacg 19248478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27679539 - 27679497
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||| ||||||||||||||||||||||||||    
T  27679539 gcatatattatgcattatctttaccaactgagctaagctcacg 27679497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31308663 - 31308705
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||  ||||||||||||||||||||||||||||||    
T  31308663 gcatatattatatattgtctttaccaactgagctaagctcacg 31308705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35109441 - 35109399
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  35109441 gcatatattatgtattgtctttaccaactgagttaagctcacg 35109399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36321514 - 36321556
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  36321514 gcatatattatgcattgtccttaccaactgagctaagctcacg 36321556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 9123866 - 9123906
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||| ||||||||||||||||||| |||||||||    
T  9123866 catatattatgcattgtctttaccaactgagttaagctcac 9123906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3445267 - 3445309
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||| |||||| |||||| |||||||||||||||||||||||    
T  3445267 gcatacattatgcattgtccttaccaactgagctaagctcacg 3445309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5485227 - 5485185
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  5485227 gcatatattatgcattgtccctaccaactgagctaagctcacg 5485185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6375564 - 6375522
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||| ||||| |||||| |||||||||||||||||||||||    
T  6375564 gcatattttatgtattgtccttaccaactgagctaagctcacg 6375522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6489048 - 6489006
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  6489048 gcatatattatgcattgtccctaccaactgagctaagctcacg 6489006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11844458 - 11844500
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||||||||||||||||| |||||    
T  11844458 gcatatattatgcattgtccttaccaactgagctaagttcacg 11844500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15889452 - 15889410
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  15889452 gcatatattatgcattgtccctaccaactgagctaagctcacg 15889410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30893974 - 30893932
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    
T  30893974 gcatatattatgcattgtctttacaaactgagttaagctcacg 30893932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34206268 - 34206226
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||    
T  34206268 gcatatattatgcattgtctttaccaactgagttaaactcacg 34206226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34436892 - 34436850
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  34436892 gcatatattatgcattgtccctaccaactgagctaagctcacg 34436850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37614447 - 37614489
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||||  |||||| ||||||||||||||||||||||    
T  37614447 gcatatattatgcgttgtctctaccaactgagctaagctcacg 37614489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37932371 - 37932329
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  37932371 gcatatattatgcattgtccataccaactgagctaagctcacg 37932329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39914942 - 39914896
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcgga 47  Q
    |||||||||||| |||||| ||||||| |||| ||||||||||||||    
T  39914942 gcatatattatgcattgtccttaccaattgagttaagctcacgcgga 39914896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1642375 - 1642334
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| ||||| |||||||||||||||| ||||||    
T  1642375 gcatatattatgcattgtttttaccaactgagctatgctcac 1642334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 3955586 - 3955545
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| |||||||||||||| ||| |||||||||||    
T  3955586 catatattatgcattgtctttaccaattgaactaagctcacg 3955545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18489096 - 18489137
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| ||||||| ||||||||||||||| |||||    
T  18489096 gcatatattatgcattgtctataccaactgagctaaactcac 18489137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20927680 - 20927639
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  20927680 gcatatattatgtattgtccataccaactgagctaagctcac 20927639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22498983 - 22498942
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| |||||||||||| |||||||||    
T  22498983 gcatatattatgcattgtccttaccaactgagttaagctcac 22498942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25796428 - 25796469
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||| |||||| |||||| ||||||||||||||||||||||    
T  25796428 gcatacattatggattgtccttaccaactgagctaagctcac 25796469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 26409293 - 26409252
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  26409293 catatattatgcattgtccataccaactgagctaagctcacg 26409252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 28604443 - 28604480
Alignment:
Q  6 tattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  28604443 tattatgcattgtctttaccaactgagctaaactcacg 28604480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33906541 - 33906500
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||    
T  33906541 gcatacattatgaattgtccttaccaacttagctaagctcac 33906500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 34702530 - 34702489
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| |||||| |||||||||||| ||||||||||    
T  34702530 catatattatgcattgtccttaccaactgagttaagctcacg 34702489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40056610 - 40056651
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| |||||||||||| |||||||||    
T  40056610 gcatatattatgcattgtccttaccaactgagttaagctcac 40056651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5846070 - 5846034
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaag 37  Q
    |||||||||||| |||||| |||||||||||||||||    
T  5846070 gcatatattatgcattgtccttaccaactgagctaag 5846034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 10199058 - 10199018
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| ||||||  ||||||||||||||||||||||    
T  10199058 atatattatgcattgtccataccaactgagctaagctcacg 10199018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11017217 - 11017169
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggata 49  Q
    |||||||||||| ||| ||  ||||||||||||||| ||||||||||||    
T  11017217 gcatatattatgcattatccctaccaactgagctaaactcacgcggata 11017169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13409469 - 13409429
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| ||||||||||| ||||||||||| ||||    
T  13409469 gcatatattatgcattgtctttactaactgagctaaactca 13409429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16752522 - 16752562
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||| ||||||||||| |||||||||    
T  16752522 gcatatattatgcattgtccttaccaactgaactaagctca 16752562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 17861456 - 17861496
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||  |||||||||||||||| ||||||||||||    
T  17861456 catatattatacattgtctttaccaactaagctaagctcac 17861496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18391641 - 18391601
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||| ||||| |||||| |||||||||||||||||||||    
T  18391641 gcatattttatgcattgtccttaccaactgagctaagctca 18391601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31159470 - 31159430
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||||||| |||||||| ||||||||    
T  31159470 gcatatattatgtattgtctttatcaactgagttaagctca 31159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43108610 - 43108570
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||| |||||||||||| ||||||||    
T  43108610 gcatatattatgcattgtccttaccaactgagttaagctca 43108570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000007; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7206166 - 7206124
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  7206166 gcatatattatgcattgtctctaccaactgagctaagctcacg 7206124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10156058 - 10156016
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  10156058 gcatatattatgtattgtccttaccaactgagctaagctcacg 10156016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18231493 - 18231535
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  18231493 gcatatattatgcattgtccttaccaactgagctaagctcacg 18231535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19179070 - 19179112
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  19179070 gcatatattatgcattgtccttaccaactgagctaagctcacg 19179112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22608568 - 22608526
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  22608568 gcatatattatgcattgtctctaccaactgagctaagctcacg 22608526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24593417 - 24593375
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  24593417 gcatatattatgcattgtccttaccaactgagctaagctcacg 24593375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37320537 - 37320579
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  37320537 gcatatattatgcattgtctttaccaactgagttaagctcacg 37320579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44496720 - 44496762
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  44496720 gcatatattatgtattgtccttaccaactgagctaagctcacg 44496762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 9459079 - 9459124
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacgcggat 48  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||    
T  9459079 atatattatgcattgtctttatcaactgagctaagctcacggggat 9459124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 10332296 - 10332345
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacgcggatatc 51  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| |||||||    
T  10332296 catatattatgcattgtccttatcaactgagctaagctcacgaggatatc 10332345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20120741 - 20120782
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  20120741 gcatatattatgcattgtccttaccaactgagctaagctcac 20120782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24520659 - 24520700
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||||||||||||| ||||||||||||    
T  24520659 gcatatattatgcattgtctttaccaactaagctaagctcac 24520700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 7413211 - 7413251
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  7413211 atatattatgcattgtccttaccaactgagctaagctcacg 7413251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 13000725 - 13000685
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  13000725 catatattatgcattatctttaccaactgagctaagctcac 13000685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 24548050 - 24548010
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  24548050 atatattatggattgtccttaccaactgagctaagctcacg 24548010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 27934879 - 27934919
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  27934879 atatattatgtattgtccttaccaactgagctaagctcacg 27934919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40099403 - 40099443
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  40099403 gcatatattatgcattgtccttaccaactgagctaagctca 40099443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 40896531 - 40896571
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  40896531 atatattatgcattgtctataccaactgagctaagctcacg 40896571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12124725 - 12124678
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggat 48  Q
    |||||||||||| |||||| ||||||||||||||||||| ||| ||||    
T  12124725 gcatatattatgcattgtccttaccaactgagctaagctgacggggat 12124678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5676780 - 5676738
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||| ||||||||||    
T  5676780 gcatatattatgcattgtcattaccaactgagttaagctcacg 5676738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7029411 - 7029453
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||    
T  7029411 gcatatattatgtattgtttttaccaactgagctaatctcacg 7029453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9383229 - 9383271
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  9383229 gcatatattatgcattgtccataccaactgagctaagctcacg 9383271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12124586 - 12124544
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||| ||||||    
T  12124586 gcatatattatgcattgtccttaccaactgagctaaactcacg 12124544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20565095 - 20565137
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  20565095 gcatatattatgcattgtccctaccaactgagctaagctcacg 20565137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22523032 - 22523074
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  22523032 gcatatattatgtattgtccataccaactgagctaagctcacg 22523074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24393286 - 24393244
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||| |||||||||||||||||||    
T  24393286 gcatatattatgcattgtccttaacaactgagctaagctcacg 24393244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28771623 - 28771581
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||| ||||||    
T  28771623 gcatatattatgcattgtccttaccaactgagctaaactcacg 28771581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39068728 - 39068770
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| ||| |||||||||||||||||||    
T  39068728 gcatatattatgcattgtccttatcaactgagctaagctcacg 39068770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 43117210 - 43117252
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||| ||||||    
T  43117210 gcatatattatgcattgtccttaccaactgagctaaactcacg 43117252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 43826463 - 43826501
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctc 40  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  43826463 catatattatgtattgtccttaccaactgagctaagctc 43826501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 2429056 - 2429015
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| |||||| ||||||||||| |||||||||||    
T  2429056 catatattatgcattgtccttaccaactgaactaagctcacg 2429015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4056831 - 4056790
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| |||||||| |||||||||||||    
T  4056831 gcatatattatgcattgtccttaccaaccgagctaagctcac 4056790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4897584 - 4897543
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| |||||||||||| |||||||||    
T  4897584 gcatatattatgcattgtccttaccaactgagttaagctcac 4897543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4944978 - 4944937
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| |||||||||||| |||||||||    
T  4944978 gcatatattatgcattgtccttaccaactgagttaagctcac 4944937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 7052809 - 7052772
Alignment:
Q  6 tattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  7052809 tattatgcattgtccttaccaactgagctaagctcacg 7052772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18324914 - 18324955
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| |||||||||||| |||||||||    
T  18324914 gcatatattatgcattgtccttaccaactgagttaagctcac 18324955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 27412857 - 27412898
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||    
T  27412857 catatattatgcattgtctctaccaactgagttaagctcacg 27412898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39088819 - 39088860
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  39088819 gcatatattatgcattgtctttaccaactgagttaagttcac 39088860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 44926422 - 44926463
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||    
T  44926422 catatataatgcattgtctttaccaactgagataagctcacg 44926463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 2661070 - 2661110
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||| |||||||||||| ||||||||||    
T  2661070 atatattatgcattgtccttaccaactgagttaagctcacg 2661110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 9752120 - 9752164
Alignment:
Q  4 tatattatgaattgtctttaccaactgagctaagctcacgcggat 48  Q
    ||||||||| |||||| ||||||||||||||| ||||||| ||||    
T  9752120 tatattatgcattgtccttaccaactgagctatgctcacgaggat 9752164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 20517062 - 20517014
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcacgcggatat 50  Q
    ||||||||||| |||||  |||||||||||||||| |||||| ||||||    
T  20517062 catatattatgcattgttcttaccaactgagctaaactcacgaggatat 20517014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26133540 - 26133580
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||| |||||||||||| ||||||||    
T  26133540 gcatatattatgcattgtccttaccaactgagttaagctca 26133580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 30243289 - 30243249
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| ||||||| |||||||||||||||| |||||    
T  30243289 atatattatgcattgtctctaccaactgagctaagttcacg 30243249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 33832690 - 33832730
Alignment:
Q  2 catatattatgaattgtctttaccaactgagctaagctcac 42  Q
    ||||||||||| |||||| |||||||| |||||||||||||    
T  33832690 catatattatgcattgtcgttaccaaccgagctaagctcac 33832730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35685081 - 35685121
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||| |||||||||||||||| ||||    
T  35685081 gcatatattatgcattgtccttaccaactgagctaaactca 35685121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25430 - 25382
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacgcggata 49  Q
    |||||||||||| |||||| |||||||||||| |||||||||| |||||    
T  25430 gcatatattatgcattgtccttaccaactgagttaagctcacggggata 25382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34908 - 34950
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||| ||||||||||    
T  34908 gcatatattatgcattgtccttaccaactgagttaagctcacg 34950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40039 - 39997
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  40039 gcatatattatgcattgtccataccaactgagctaagctcacg 39997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18334 - 18292
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||  |||||| |||||||||||||||||||||||    
T  18334 gcatatattatacattgtccttaccaactgagctaagctcacg 18292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 239848 - 239806
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||||| |||||| |||||||||||||||| ||||||    
T  239848 gcatatattatgcattgtccttaccaactgagctaaactcacg 239806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42354 - 42395
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| || |||||||||||||||||||    
T  42354 gcatatattatgcattgtccttcccaactgagctaagctcac 42395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 75366 - 75325
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctcac 42  Q
    |||||||||||| |||||| |||||||||||||| |||||||    
T  75366 gcatatattatgcattgtccttaccaactgagcttagctcac 75325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 21777 - 21817
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||| ||||| ||||||| ||||||||||||||||||||||    
T  21777 atattttatgcattgtctataccaactgagctaagctcacg 21817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 5464 - 5424
Alignment:
Q  3 atatattatgaattgtctttaccaactgagctaagctcacg 43  Q
    |||||||||| |||||  |||||||||||||||||||||||    
T  5464 atatattatgcattgttcttaccaactgagctaagctcacg 5424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25736 - 25696
Alignment:
Q  1 gcatatattatgaattgtctttaccaactgagctaagctca 41  Q
    |||||||||||| |||||  |||||||||||||||||||||    
T  25736 gcatatattatgcattgttcttaccaactgagctaagctca 25696  T

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