View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8905A_low_4 (Length: 558)
Name: NF8905A_low_4
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8905A_low_4 |
 | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
| [»] scaffold1079 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 523; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 523; E-Value: 0
Query Start/End: Original strand, 11 - 541
Target Start/End: Complemental strand, 16899230 - 16898700
Alignment:
| Q |
11 |
atggacatcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
110 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16899230 |
atggacagcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
16899131 |
T |
|
| Q |
111 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16899130 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
16899031 |
T |
|
| Q |
211 |
aaaagatatattttacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtg |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16899030 |
aaaagatatattttacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtg |
16898931 |
T |
|
| Q |
311 |
cggtttgaactattgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccagtttgagtacctctacaggat |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
16898930 |
cggtttgaactattgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggat |
16898831 |
T |
|
| Q |
411 |
agacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaa |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16898830 |
agacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaa |
16898731 |
T |
|
| Q |
511 |
gacaaaattgtttcaagcaccgacagaacac |
541 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
16898730 |
gacaaaattgtttcaagcaccgacagaacac |
16898700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 519; E-Value: 0
Query Start/End: Original strand, 11 - 541
Target Start/End: Complemental strand, 18347745 - 18347215
Alignment:
| Q |
11 |
atggacatcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
110 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18347745 |
atggacagcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
18347646 |
T |
|
| Q |
111 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18347645 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
18347546 |
T |
|
| Q |
211 |
aaaagatatattttacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtg |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18347545 |
aaaagatatattttacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtg |
18347446 |
T |
|
| Q |
311 |
cggtttgaactattgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccagtttgagtacctctacaggat |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
18347445 |
cggtttgaactattgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggat |
18347346 |
T |
|
| Q |
411 |
agacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaa |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18347345 |
agacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcggtagtttctcatataaaattattgaccctaaagatatagtaatatggagaa |
18347246 |
T |
|
| Q |
511 |
gacaaaattgtttcaagcaccgacagaacac |
541 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
18347245 |
gacaaaattgtttcaagcaccgacagaacac |
18347215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 51701232 - 51701101
Alignment:
| Q |
61 |
gcagggcatagaggggg-aggtcataagcgtctataccgtaaaattgattttcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcga---- |
155 |
Q |
| |
|
||||||||||||||||| || ||||||| |||||||| |||||||||||||||| ||||||| |||||||||||||| || |||||||| ||| |
|
|
| T |
51701232 |
gcagggcatagaggggggagatcataagtgtctatactgtaaaattgattttcgtaagaatgaaatagacatatatggtcaaaacgtaactaacgaatat |
51701133 |
T |
|
| Q |
156 |
atacgaccctaatagaaatgcacacatttgtc |
187 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |
|
|
| T |
51701132 |
atacgaccctaattgaaatgcacacatttgtc |
51701101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 51701430 - 51701385
Alignment:
| Q |
22 |
cattgtggtaaaggccgtaatgccagaggaatcattaccgcagggc |
67 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
51701430 |
cattgtgttaaaggccgtaatgccagaggaatctttaccgcagggc |
51701385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 34689095 - 34689050
Alignment:
| Q |
475 |
aaattattgaccctaaagatatagtaatatggagaagacaaaattg |
520 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
34689095 |
aaattattgaccttctagatatagtaatatggagaagacaaaattg |
34689050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 519; Significance: 0; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 519; E-Value: 0
Query Start/End: Original strand, 11 - 541
Target Start/End: Original strand, 13236746 - 13237276
Alignment:
| Q |
11 |
atggacatcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
110 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13236746 |
atggacagcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
13236845 |
T |
|
| Q |
111 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13236846 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
13236945 |
T |
|
| Q |
211 |
aaaagatatattttacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtg |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13236946 |
aaaagatatattttacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtg |
13237045 |
T |
|
| Q |
311 |
cggtttgaactattgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccagtttgagtacctctacaggat |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
13237046 |
cggtttgaactattgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggat |
13237145 |
T |
|
| Q |
411 |
agacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaa |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13237146 |
agacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcggtagtttctcatataaaattattgaccctaaagatatagtaatatggagaa |
13237245 |
T |
|
| Q |
511 |
gacaaaattgtttcaagcaccgacagaacac |
541 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
13237246 |
gacaaaattgtttcaagcaccgacagaacac |
13237276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 338 - 541
Target Start/End: Original strand, 41641583 - 41641786
Alignment:
| Q |
338 |
ggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccagtttgagtacctctacaggatagacttcaacagaaaactgaagagtaa |
437 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41641583 |
ggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccaatttgagtacctctacaggatagacttcaacagaaaactgaagagtaa |
41641682 |
T |
|
| Q |
438 |
cggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaagacaaaattgtttcaagcaccgacaga |
537 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41641683 |
cggcagcaagtgattgagttcggtagtttctcatataaaattattgaccctaaagatatagtaatatggagaagacaaaattgtttcaagcaccgacaga |
41641782 |
T |
|
| Q |
538 |
acac |
541 |
Q |
| |
|
|||| |
|
|
| T |
41641783 |
acac |
41641786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 378; Significance: 0; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 24 - 541
Target Start/End: Original strand, 198277 - 198794
Alignment:
| Q |
24 |
ttgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattttcgacgtaatgaa |
123 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| || |
|
|
| T |
198277 |
ttgtggtaaaggtcgtaattccagaggaatcattaccgcatggcatagagggggaggtcataagcgcctataccgtaaaatagattttcgacggaatcaa |
198376 |
T |
|
| Q |
124 |
aaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgagaaaagatatattt |
223 |
Q |
| |
|
|||||||||| |||| |||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
198377 |
aaagacatatctggtagaatcgtaaccatagaatacgaccctaatcgaaatgcatacatttgtctcatacactatggggatggtgagaagagatatattt |
198476 |
T |
|
| Q |
224 |
tacaccccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtgcggtttgaactat |
323 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
198477 |
tacatcccagaggggctataattggagatactattgtttctggtacaaaagttcctatatcaatgggaaatgccctacctttgagtgcggtttgaactat |
198576 |
T |
|
| Q |
324 |
tgatttacgtaattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccagtttgagtacctctacaggatagacttcaacaga |
423 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| ||||| ||||||||| |||||||| |||||||| |
|
|
| T |
198577 |
tgatttacgtaattggaagtaaccaattaggtttacgacgaaacctagaaatcgatcactgatccaatttgactacctctacgggatagacctcaacaga |
198676 |
T |
|
| Q |
424 |
aaactgaagagtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaagacaaaattgttt |
523 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
198677 |
aaactgttgagtaacggcagcaagtgattgagttcagtagttcctcatagaaaattattgactctagagatatggtaatatggagaagacaaaattgttt |
198776 |
T |
|
| Q |
524 |
caagcaccgacagaacac |
541 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
198777 |
caagcaccgacagaacac |
198794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 397 - 539
Target Start/End: Complemental strand, 282366 - 282224
Alignment:
| Q |
397 |
tacctctacaggatagacttcaacagaaaactgaagagtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatat |
496 |
Q |
| |
|
||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||||| |
|
|
| T |
282366 |
tacctctacgggatagacctcaacagaaaactgttgagtaacggcagcaagtgattgagttcagtagttcctcatagaaaattattgactctagagatat |
282267 |
T |
|
| Q |
497 |
agtaatatggagaagacaaaattgtttcaagcaccgacagaac |
539 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
282266 |
ggtaatatggagaagacaaaattgtttgaagcacgcacagaac |
282224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 234 - 541
Target Start/End: Original strand, 33064637 - 33064943
Alignment:
| Q |
234 |
aggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtgcggtttgaactattgatttacgt |
333 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| || |
|
|
| T |
33064637 |
aggggctataattggagataccattgtttatggtacaaaagttcctataaaa-tgggaaatgccctacctttgagtgtgatttgaactattgatttatgt |
33064735 |
T |
|
| Q |
334 |
aattggaagtaaccaattaggtttacggcgaaacctatcaatcgatcacggatccagtttgagtacctctacaggatagacttcaacagaaaactgaaga |
433 |
Q |
| |
|
||||||||||||||||||| | ||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
33064736 |
aattggaagtaaccaattaagattacggcgaaatctatcaatcgatcacggatccaatttgagtacctctaccggatagacttcaacagaaaactaaaga |
33064835 |
T |
|
| Q |
434 |
gtaacggcagcaagtgattgagttcagtagtttctcatataaaattattgaccctaaagatatagtaatatggagaagacaaaattgtttcaagcaccga |
533 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
33064836 |
gtaacgacaataagtgattgagttcagtagtttctcatataaattttttgaccctaaagatatagtaatatggagaaggcaaaattgtttcaagcaccga |
33064935 |
T |
|
| Q |
534 |
cagaacac |
541 |
Q |
| |
|
|| ||||| |
|
|
| T |
33064936 |
caaaacac |
33064943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 26345819 - 26345889
Alignment:
| Q |
108 |
ttttcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcac |
178 |
Q |
| |
|
||||||||| ||| ||||||||||||||| | |||||||||||| ||| || |||||||| ||||||||| |
|
|
| T |
26345819 |
ttttcgacggaataaaaaagacatatatgattgaatcgtaactagtgaaaacaaccctaatcgaaatgcac |
26345889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 127 - 366
Target Start/End: Complemental strand, 33420594 - 33420354
Alignment:
| Q |
127 |
gacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgagaaaagatatattttac |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33420594 |
gacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttatctcatacactatggggatggtgagaaaagatatattttac |
33420495 |
T |
|
| Q |
227 |
accccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtgcggtttgaactattga |
326 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33420494 |
accccagaggggctataattggagataccattgtttatggtacagaagttcctataaaaatgggaaatgccctacctttgagtgcggtttgaactattga |
33420395 |
T |
|
| Q |
327 |
ttta-cgtaattggaagtaaccaattaggtttacggcgaaa |
366 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
33420394 |
tttatcgtaattggaagtaaccaattagatttacggcgaaa |
33420354 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1079 (Bit Score: 162; Significance: 3e-86; HSPs: 1)
Name: scaffold1079
Description:
Target: scaffold1079; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 11 - 212
Target Start/End: Complemental strand, 202 - 1
Alignment:
| Q |
11 |
atggacatcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
110 |
Q |
| |
|
||||||| |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
202 |
atggacagcatcgttgtggtaaaggtcgtaatgccagaggaatcattaccgcaaggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
103 |
T |
|
| Q |
111 |
tcgacgtaatgaaaaagacatatatggtcgaatcgtaactatcgaatacgaccctaatagaaatgcacacatttgtctcatacactatggggatggtgag |
210 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
102 |
tcgacgaaatgaaaaagacatatatggtagaatcgtaaccatagaatacgaccctaatcgaaatgcatacatttgtctcatacactatggggatggtgag |
3 |
T |
|
| Q |
211 |
aa |
212 |
Q |
| |
|
|| |
|
|
| T |
2 |
aa |
1 |
T |
|
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Target: chr2 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 23053452 - 23053585
Alignment:
| Q |
11 |
atggacatcatcattgtggtaaaggccgtaatgccagaggaatcattaccgcagggcatagagggggaggtcataagcgtctataccgtaaaattgattt |
110 |
Q |
| |
|
||||||| ||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
23053452 |
atggacagcatcactgtggtaaaggctgtaatgccagaggaatcgttaccacagggcatagagggagaggtcataagcgtctataccgtaaaattgattt |
23053551 |
T |
|
| Q |
111 |
tcgacgtaatgaaaaagacatatatggtcgaatc |
144 |
Q |
| |
|
|| ||| |||||||||||||||||| |||||||| |
|
|
| T |
23053552 |
tctacggaatgaaaaagacatatatagtcgaatc |
23053585 |
T |
|
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Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 452 - 500
Target Start/End: Original strand, 4162364 - 4162412
Alignment:
| Q |
452 |
tgagttcagtagtttctcatataaaattattgaccctaaagatatagta |
500 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4162364 |
tgagttcagttgtttctcatataaaattattgaccctaaagatatagta |
4162412 |
T |
|
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Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 452 - 497
Target Start/End: Complemental strand, 4174896 - 4174851
Alignment:
| Q |
452 |
tgagttcagtagtttctcatataaaattattgaccctaaagatata |
497 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4174896 |
tgagttcagttgtttctcatataaaattattgaccctaaagatata |
4174851 |
T |
|
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